Long chain base biosynthesis protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| gag_pre-integrs | PF13976 | 50 - 97 | 1.4e-15 | GAG-pre-integrase domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 244 |
| AcsI | RAATTY | 2 cut(s) | 108, 143 |
| AgsI | TTSAA | 5 cut(s) | 21, 135, 260, 280, 315 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 295, 327 |
| AluBI | AGCT | 1 cut(s) | 86 |
| AluI | AGCT | 1 cut(s) | 86 |
| ApoI | RAATTY | 2 cut(s) | 108, 143 |
| BfaI | CTAG | 1 cut(s) | 300 |
| BfmI | CTRYAG | 1 cut(s) | 81 |
| BfuAI | ACCTGC | 1 cut(s) | 244 |
| BmsI | GCATC | 3 cut(s) | 25, 142, 164 |
| BsaJI | CCNNGG | 2 cut(s) | 13, 240 |
| BseDI | CCNNGG | 2 cut(s) | 13, 240 |
| Bsp19I | CCATGG | 1 cut(s) | 13 |
| BspMI | ACCTGC | 1 cut(s) | 244 |
| BssECI | CCNNGG | 2 cut(s) | 13, 240 |
| BssT1I | CCWWGG | 2 cut(s) | 13, 240 |
| Bst4CI | ACNGT | 1 cut(s) | 82 |
| BstDSI | CCRYGG | 1 cut(s) | 13 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 282 |
| BstSFI | CTRYAG | 1 cut(s) | 81 |
| BtgI | CCRYGG | 1 cut(s) | 13 |
| BveI | ACCTGC | 1 cut(s) | 244 |
| CviAII | CATG | 1 cut(s) | 14 |
| CviJI | RGCY | 1 cut(s) | 86 |
| CviKI_1 | RGCY | 1 cut(s) | 86 |
| Eco130I | CCWWGG | 2 cut(s) | 13, 240 |
| EcoT14I | CCWWGG | 2 cut(s) | 13, 240 |
| EcoT22I | ATGCAT | 1 cut(s) | 157 |
| ErhI | CCWWGG | 2 cut(s) | 13, 240 |
| FaeI | CATG | 1 cut(s) | 17 |
| FaiI | YATR | 3 cut(s) | 15, 174, 189 |
| FatI | CATG | 1 cut(s) | 13 |
| FspBI | CTAG | 1 cut(s) | 300 |
| Hin1II | CATG | 1 cut(s) | 17 |
| Hpy166II | GTNNAC | 1 cut(s) | 326 |
| Hpy8I | GTNNAC | 1 cut(s) | 326 |
| HpyCH4III | ACNGT | 1 cut(s) | 82 |
| HpyCH4V | TGCA | 3 cut(s) | 65, 155, 208 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 282 |
| Hsp92II | CATG | 1 cut(s) | 17 |
| LpnPI | CCDG | 4 cut(s) | 114, 179, 249, 294 |
| LweI | GCATC | 3 cut(s) | 25, 142, 164 |
| MaeI | CTAG | 1 cut(s) | 300 |
| MluCI | AATT | 5 cut(s) | 22, 67, 108, 143, 342 |
| Mph1103I | ATGCAT | 1 cut(s) | 157 |
| MseI | TTAA | 2 cut(s) | 119, 341 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 282 |
| NcoI | CCATGG | 1 cut(s) | 13 |
| NlaIII | CATG | 1 cut(s) | 17 |
| NsiI | ATGCAT | 1 cut(s) | 157 |
| SaqAI | TTAA | 2 cut(s) | 119, 341 |
| SetI | ASST | 5 cut(s) | 88, 133, 187, 238, 313 |
| SfaNI | GCATC | 3 cut(s) | 25, 142, 164 |
| SfcI | CTRYAG | 1 cut(s) | 81 |
| Sse9I | AATT | 5 cut(s) | 22, 67, 108, 143, 342 |
| SspMI | CTAG | 1 cut(s) | 300 |
| StyI | CCWWGG | 2 cut(s) | 13, 240 |
| TaaI | ACNGT | 1 cut(s) | 82 |
| TasI | AATT | 5 cut(s) | 22, 67, 108, 143, 342 |
| Tru1I | TTAA | 2 cut(s) | 119, 341 |
| Tru9I | TTAA | 2 cut(s) | 119, 341 |
| XapI | RAATTY | 2 cut(s) | 108, 143 |
| XspI | CTAG | 1 cut(s) | 300 |
| Zsp2I | ATGCAT | 1 cut(s) | 157 |