AT4G08267

Protein of unknown function (DUF 659)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
5216854 .. 5217697
844 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G08267.1

Sequence Viewer

Length: 381 bp
ATGCATTTGCATCCTTTGAAGAACACAAGGAAGCAAAAAGGAGTAGTCACCAATAATGCTTCAAATTATGTAAAATCCGGTGCACTTATTTCAGCCAAGTTTTCTACTATCTTTTGGACACCATGTGTGGTTCATACTTTGAACCTTGCGTTGAAGAACACATGTGCACCATCATTGAGCACAAGAAACAATGAAGTTGTATATAAAGCTTGTTATTGGATAAAGTTTATAAGTGAAAATGTGACGTGGATCAAGAATAGCATTATGAACTATGGAGTGAGGCTTGTAATGTTTACTGAACATTGTGATCTTAAGCTCCTTACAATATCTTCTAGAAGTGTGATTAGAGCTGTAGATATTGATAACCTTCTCTTCATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

126

Amino Acids

14.33

Weight (kDa)

9.7

Isoelectric Point (pI)

17.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF659 PF04937 15 - 75 9.8e-11 Domain of unknown function (DUF659)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000421)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08267
fragaria_vesca FvH4_2g14331 FvH4_2g16371 FvH4_2g26163 FvH4_3g42540 FvH4_4g02102 FvH4_4g12491 FvH4_4g35171 FvH4_5g06632 FvH4_5g06632 FvH4_5g06632 FvH4_5g08811 FvH4_5g08812 FvH4_5g23531 FvH4_6g10272 FvH4_6g40844 FvH4_7g16803 FvH4_7g16804
malus_domestica MD11G1099500.v1.1 MD17G1176800.v1.1
pyrus_communis pycom05g07840 pycom06g08730 pycom07g12010 pycom07g12020 pycom10g07270 pycom11g17470 pycom12g10610 pycom12g14240 pycom13g22040 pycom15g02440
rosa_chinensis RchiOBHm_Chr1g0371321 RchiOBHm_Chr2g0102701 RchiOBHm_Chr3g0465681 RchiOBHm_Chr4g0420941 RchiOBHm_Chr4g0434271 RchiOBHm_Chr4g0442721 RchiOBHm_Chr6g0262081 RchiOBHm_Chr6g0278171 RchiOBHm_Chr6g0294991 RchiOBHm_Chr6g0295001 RchiOBHm_Chr7g0205361 RchiOBHm_Chr7g0205371 RchiOBHm_Chr7g0223471
rosa_laevigata RLG00000005266
rosa_multiflora Rmu_sc0000493.1_g000033 Rmu_sc0000493.1_g000034 Rmu_sc0000507.1_g000007 Rmu_sc0000843.1_g000001 Rmu_sc0001075.1_g000033 Rmu_sc0002077.1_g000007 Rmu_sc0002077.1_g000008 Rmu_sc0002329.1_g000029 Rmu_sc0002539.1_g000077 Rmu_sc0002655.1_g000006 Rmu_sc0003127.1_g000020 Rmu_sc0003765.1_g000054 Rmu_sc0004368.1_g000023 Rmu_sc0004753.1_g000022 Rmu_sc0005297.1_g000014 Rmu_sc0007633.1_g000010 Rmu_sc0008164.1_g000005 Rmu_sc0008191.1_g000003 Rmu_sc0017900.1_g000005 Rmu_sc0022727.1_g000002
rosa_roxburghii Rroxscaffold_2G00079920 Rroxscaffold_3G00255890 Rroxscaffold_4G00295340 Rroxscaffold_4G00296360 Rroxscaffold_4G00299640 Rroxscaffold_6G00388210
rosa_rugosa Rorug02G0466700 Rorug04G0123200 Rorug05G0074800 Rorug07G0202900
rosa_samantha Rh1DG134700 Rh3CG159000 Rh4AG331000 Rh5AG521100 Rh5BG136400 Rh5DG127300 Rh5DG383100 Rh5DG386100 Rh5DG458000 Rh6CG450400 Rh7CG233800 Rh7DG407100
rosa_wichuraiana Rw1G004960 Rw1G005730 Rw1G006360 Rw1G017400 Rw2G013190 Rw2G022210 Rw2G029640 Rw5G020910 Rw5G036930 Rw6G016200 Rw7G018170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 230
AclWI GGATC 1 cut(s) 257
AdeI CACNNNGTG 1 cut(s) 125
AflII CTTAAG 1 cut(s) 311
AflIII ACRYGT 1 cut(s) 161
AgsI TTSAA 4 cut(s) 19, 63, 142, 154
AjiI CACGTC 1 cut(s) 246
AluBI AGCT 3 cut(s) 209, 316, 350
AluI AGCT 3 cut(s) 209, 316, 350
Alw21I GWGCWC 3 cut(s) 85, 169, 182
Alw44I GTGCAC 2 cut(s) 81, 165
AlwI GGATC 1 cut(s) 257
ApaLI GTGCAC 2 cut(s) 81, 165
AsuHPI GGTGA 1 cut(s) 40
BaeGI GKGCMC 2 cut(s) 85, 169
Bbv12I GWGCWC 3 cut(s) 85, 169, 182
BccI CCATC 1 cut(s) 178
BfaI CTAG 2 cut(s) 333, 379
BfmI CTRYAG 1 cut(s) 351
BfrI CTTAAG 1 cut(s) 311
BmgBI CACGTC 1 cut(s) 246
BmsI GCATC 1 cut(s) 19
BsaWI WCCGGW 1 cut(s) 77
BseGI GGATG 1 cut(s) 10
BseSI GKGCMC 2 cut(s) 85, 169
BsiHKAI GWGCWC 3 cut(s) 85, 169, 182
BsiSI CCGG 1 cut(s) 78
Bsp1286I GDGCHC 3 cut(s) 85, 169, 182
Bsp143I GATC 2 cut(s) 249, 307
BspPI GGATC 1 cut(s) 257
BspTI CTTAAG 1 cut(s) 311
BssMI GATC 2 cut(s) 249, 307
Bst6I CTCTTC 1 cut(s) 377
BstAFI CTTAAG 1 cut(s) 311
BstF5I GGATG 1 cut(s) 10
BstKTI GATC 2 cut(s) 252, 310
BstMBI GATC 2 cut(s) 249, 307
BstNSI RCATGY 1 cut(s) 165
BstSFI CTRYAG 1 cut(s) 351
BstSLI GKGCMC 2 cut(s) 85, 169
BtrI CACGTC 1 cut(s) 246
BtsCI GGATG 1 cut(s) 10
CviAII CATG 2 cut(s) 123, 162
CviJI RGCY 5 cut(s) 95, 209, 283, 316, 350
CviKI_1 RGCY 5 cut(s) 95, 209, 283, 316, 350
DpnI GATC 2 cut(s) 251, 309
DpnII GATC 2 cut(s) 249, 307
DraIII CACNNNGTG 1 cut(s) 125
Eam1104I CTCTTC 1 cut(s) 377
EarI CTCTTC 1 cut(s) 377
EcoT22I ATGCAT 1 cut(s) 6
FaeI CATG 2 cut(s) 126, 165
FaiI YATR 9 cut(s) 69, 124, 135, 163, 202, 204, 230, 266, 273
FatI CATG 2 cut(s) 122, 161
FspBI CTAG 2 cut(s) 333, 379
HapII CCGG 1 cut(s) 78
Hin1II CATG 2 cut(s) 126, 165
HindIII AAGCTT 1 cut(s) 207
HpaII CCGG 1 cut(s) 78
HphI GGTGA 1 cut(s) 40
Hpy166II GTNNAC 3 cut(s) 83, 167, 294
Hpy188III TCNNGA 2 cut(s) 253, 333
Hpy8I GTNNAC 3 cut(s) 83, 167, 294
HpyAV CCTTC 1 cut(s) 377
HpyCH4IV ACGT 1 cut(s) 245
HpyCH4V TGCA 4 cut(s) 4, 10, 83, 167
HpySE526I ACGT 1 cut(s) 245
Hsp92II CATG 2 cut(s) 126, 165
Kzo9I GATC 2 cut(s) 249, 307
LmnI GCTCC 1 cut(s) 321
LpnPI CCDG 1 cut(s) 91
LweI GCATC 1 cut(s) 19
MaeI CTAG 2 cut(s) 333, 379
MaeII ACGT 1 cut(s) 245
MaeIII GTNAC 2 cut(s) 46, 241
MalI GATC 2 cut(s) 251, 309
MboI GATC 2 cut(s) 249, 307
MboII GAAGA 4 cut(s) 31, 166, 321, 364
MhlI GDGCHC 3 cut(s) 85, 169, 182
MluCI AATT 1 cut(s) 64
MnlI CCTC 1 cut(s) 273
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 1 cut(s) 312
MspCI CTTAAG 1 cut(s) 311
MspI CCGG 1 cut(s) 78
NdeII GATC 2 cut(s) 249, 307
NlaIII CATG 2 cut(s) 126, 165
NmuCI GTSAC 2 cut(s) 46, 241
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 165
PciI ACATGT 1 cut(s) 161
PscI ACATGT 1 cut(s) 161
PsiI TTATAA 1 cut(s) 230
SaqAI TTAA 1 cut(s) 312
Sau3AI GATC 2 cut(s) 249, 307
SduI GDGCHC 3 cut(s) 85, 169, 182
SetI ASST 6 cut(s) 147, 211, 248, 318, 352, 369
SfaNI GCATC 1 cut(s) 19
SfcI CTRYAG 1 cut(s) 351
SmlI CTYRAG 1 cut(s) 311
SmoI CTYRAG 1 cut(s) 311
Sse9I AATT 1 cut(s) 64
SspMI CTAG 2 cut(s) 333, 379
TaiI ACGT 1 cut(s) 248
TasI AATT 1 cut(s) 64
Tru1I TTAA 1 cut(s) 312
Tru9I TTAA 1 cut(s) 312
TseFI GTSAC 2 cut(s) 46, 241
Tsp45I GTSAC 2 cut(s) 46, 241
TspDTI ATGAA 4 cut(s) 122, 207, 281, 364
Vha464I CTTAAG 1 cut(s) 311
VneI GTGCAC 2 cut(s) 81, 165
XbaI TCTAGA 1 cut(s) 332
XceI RCATGY 1 cut(s) 165
XspI CTAG 2 cut(s) 333, 379
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.