Encoded by
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 908, 1795 |
| AciI | CCGC | 3 cut(s) | 194, 1019, 1472 |
| AclWI | GGATC | 1 cut(s) | 810 |
| AcsI | RAATTY | 3 cut(s) | 116, 794, 1688 |
| AdeI | CACNNNGTG | 2 cut(s) | 953, 1894 |
| AfaI | GTAC | 6 cut(s) | 58, 140, 346, 491, 1553, 1873 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 314 |
| AflIII | ACRYGT | 1 cut(s) | 295 |
| AgeI | ACCGGT | 1 cut(s) | 497 |
| AhlI | ACTAGT | 2 cut(s) | 59, 341 |
| AjnI | CCWGG | 2 cut(s) | 568, 583 |
| AleI | CACNNNNGTG | 1 cut(s) | 109 |
| AluBI | AGCT | 7 cut(s) | 71, 287, 419, 661, 1250, 1790, 1967 |
| AluI | AGCT | 7 cut(s) | 71, 287, 419, 661, 1250, 1790, 1967 |
| Alw26I | GTCTC | 1 cut(s) | 1461 |
| AlwI | GGATC | 1 cut(s) | 810 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 422, 1058, 1253, 1352 |
| ApeKI | GCWGC | 3 cut(s) | 284, 419, 1247 |
| ApoI | RAATTY | 3 cut(s) | 116, 794, 1688 |
| AseI | ATTAAT | 2 cut(s) | 275, 732 |
| AsiGI | ACCGGT | 1 cut(s) | 497 |
| AspS9I | GGNCC | 2 cut(s) | 603, 758 |
| AsuC2I | CCSGG | 1 cut(s) | 40 |
| AsuHPI | GGTGA | 3 cut(s) | 265, 485, 2033 |
| AvaII | GGWCC | 2 cut(s) | 603, 758 |
| BanI | GGYRCC | 2 cut(s) | 908, 1795 |
| BbsI | GAAGAC | 3 cut(s) | 433, 727, 2145 |
| BbvI | GCAGC | 3 cut(s) | 296, 406, 1259 |
| BccI | CCATC | 8 cut(s) | 2, 316, 389, 464, 692, 1189, 1807, 2018 |
| BciT130I | CCWGG | 2 cut(s) | 570, 585 |
| BciVI | GTATCC | 3 cut(s) | 939, 1038, 1649 |
| BclI | TGATCA | 2 cut(s) | 1335, 2122 |
| BcnI | CCSGG | 1 cut(s) | 40 |
| BcoDI | GTCTC | 1 cut(s) | 1461 |
| BcuI | ACTAGT | 2 cut(s) | 59, 341 |
| BfaI | CTAG | 8 cut(s) | 33, 60, 159, 291, 342, 522, 1829, 1968 |
| BfmI | CTRYAG | 2 cut(s) | 1423, 1555 |
| BfuI | GTATCC | 3 cut(s) | 939, 1038, 1649 |
| BisI | GCNGC | 3 cut(s) | 285, 420, 1248 |
| BlsI | GCNGC | 3 cut(s) | 286, 421, 1249 |
| BmcAI | AGTACT | 2 cut(s) | 1553, 1873 |
| Bme1390I | CCNGG | 3 cut(s) | 40, 570, 585 |
| Bme18I | GGWCC | 2 cut(s) | 603, 758 |
| BmgT120I | GGNCC | 2 cut(s) | 603, 758 |
| BmiI | GGNNCC | 4 cut(s) | 651, 910, 1761, 1797 |
| BmrFI | CCNGG | 3 cut(s) | 40, 570, 585 |
| BmsI | GCATC | 4 cut(s) | 700, 1021, 1459, 1723 |
| BpiI | GAAGAC | 3 cut(s) | 433, 727, 2145 |
| BpuEI | CTTGAG | 2 cut(s) | 2084, 2165 |
| BpuMI | CCSGG | 1 cut(s) | 40 |
| BsaAI | YACGTR | 1 cut(s) | 1303 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1199, 1584 |
| BsaJI | CCNNGG | 2 cut(s) | 1783, 2037 |
| BsaWI | WCCGGW | 1 cut(s) | 497 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1788, 1818 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 314 |
| Bse118I | RCCGGY | 3 cut(s) | 53, 497, 905 |
| Bse1I | ACTGG | 1 cut(s) | 1052 |
| Bse3DI | GCAATG | 3 cut(s) | 470, 1021, 1126 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1199, 1584 |
| BseBI | CCWGG | 2 cut(s) | 570, 585 |
| BseDI | CCNNGG | 2 cut(s) | 1783, 2037 |
| BseJI | GATNNNNATC | 2 cut(s) | 1199, 1584 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 314 |
| BseMI | GCAATG | 3 cut(s) | 470, 1021, 1126 |
| BseMII | CTCAG | 3 cut(s) | 465, 1050, 1308 |
| BseNI | ACTGG | 1 cut(s) | 1052 |
| BseRI | GAGGAG | 2 cut(s) | 213, 1912 |
| BseXI | GCAGC | 3 cut(s) | 296, 406, 1259 |
| BshNI | GGYRCC | 2 cut(s) | 908, 1795 |
| BshTI | ACCGGT | 1 cut(s) | 497 |
| BsiSI | CCGG | 4 cut(s) | 39, 54, 498, 906 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 314 |
| BsmAI | GTCTC | 1 cut(s) | 1461 |
| BsmI | GAATGC | 2 cut(s) | 266, 286 |
| Bsp143I | GATC | 5 cut(s) | 87, 802, 1335, 1666, 2122 |
| Bsp19I | CCATGG | 1 cut(s) | 1783 |
| BspACI | CCGC | 3 cut(s) | 194, 1019, 1472 |
| BspCNI | CTCAG | 3 cut(s) | 464, 1051, 1309 |
| BspHI | TCATGA | 1 cut(s) | 2125 |
| BspLI | GGNNCC | 4 cut(s) | 651, 910, 1761, 1797 |
| BspPI | GGATC | 1 cut(s) | 810 |
| BspT107I | GGYRCC | 2 cut(s) | 908, 1795 |
| BsrDI | GCAATG | 3 cut(s) | 470, 1021, 1126 |
| BsrFI | RCCGGY | 3 cut(s) | 53, 497, 905 |
| BsrI | ACTGG | 1 cut(s) | 1052 |
| BssAI | RCCGGY | 3 cut(s) | 53, 497, 905 |
| BssECI | CCNNGG | 2 cut(s) | 1783, 2037 |
| BssMI | GATC | 5 cut(s) | 87, 802, 1335, 1666, 2122 |
| BssT1I | CCWWGG | 2 cut(s) | 1783, 2037 |
| Bst2UI | CCWGG | 2 cut(s) | 570, 585 |
| Bst4CI | ACNGT | 3 cut(s) | 108, 149, 785 |
| Bst6I | CTCTTC | 3 cut(s) | 401, 1371, 2037 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 129, 1016 |
| BstBAI | YACGTR | 1 cut(s) | 1303 |
| BstC8I | GCNNGC | 1 cut(s) | 1012 |
| BstDEI | CTNAG | 7 cut(s) | 246, 451, 599, 1059, 1317, 1571, 1643 |
| BstDSI | CCRYGG | 1 cut(s) | 1783 |
| BstEII | GGTNACC | 1 cut(s) | 874 |
| BstKTI | GATC | 5 cut(s) | 90, 805, 1338, 1669, 2125 |
| BstMAI | GTCTC | 1 cut(s) | 1461 |
| BstMBI | GATC | 5 cut(s) | 87, 802, 1335, 1666, 2122 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 129, 200, 236, 386, 658, 917, 1016 |
| BstNI | CCWGG | 2 cut(s) | 570, 585 |
| BstNSI | RCATGY | 2 cut(s) | 299, 1038 |
| BstPI | GGTNACC | 1 cut(s) | 874 |
| BstSCI | CCNGG | 3 cut(s) | 38, 568, 583 |
| BstSFI | CTRYAG | 2 cut(s) | 1423, 1555 |
| BstSNI | TACGTA | 1 cut(s) | 1303 |
| BstV1I | GCAGC | 3 cut(s) | 296, 406, 1259 |
| BstV2I | GAAGAC | 3 cut(s) | 433, 727, 2145 |
| BsuI | GTATCC | 3 cut(s) | 939, 1038, 1649 |
| BtgI | CCRYGG | 1 cut(s) | 1783 |
| BtsIMutI | CAGTG | 1 cut(s) | 1350 |
| Cac8I | GCNNGC | 1 cut(s) | 1012 |
| CaiI | CAGNNNCTG | 4 cut(s) | 422, 1058, 1253, 1352 |
| CciI | TCATGA | 1 cut(s) | 2125 |
| Cfr10I | RCCGGY | 3 cut(s) | 53, 497, 905 |
| Cfr13I | GGNCC | 2 cut(s) | 603, 758 |
| Csp6I | GTAC | 6 cut(s) | 57, 139, 345, 490, 1552, 1872 |
| CspAI | ACCGGT | 1 cut(s) | 497 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 595, 630 |
| CviQI | GTAC | 6 cut(s) | 57, 139, 345, 490, 1552, 1872 |
| DdeI | CTNAG | 7 cut(s) | 246, 451, 599, 1059, 1317, 1571, 1643 |
| DpnI | GATC | 5 cut(s) | 89, 804, 1337, 1668, 2124 |
| DpnII | GATC | 5 cut(s) | 87, 802, 1335, 1666, 2122 |
| DraI | TTTAAA | 1 cut(s) | 969 |
| DraIII | CACNNNGTG | 2 cut(s) | 953, 1894 |
| Eam1104I | CTCTTC | 3 cut(s) | 401, 1371, 2037 |
| EarI | CTCTTC | 3 cut(s) | 401, 1371, 2037 |
| Eco105I | TACGTA | 1 cut(s) | 1303 |
| Eco130I | CCWWGG | 2 cut(s) | 1783, 2037 |
| Eco47I | GGWCC | 2 cut(s) | 603, 758 |
| Eco91I | GGTNACC | 1 cut(s) | 874 |
| EcoO65I | GGTNACC | 1 cut(s) | 874 |
| EcoRI | GAATTC | 1 cut(s) | 794 |
| EcoRII | CCWGG | 2 cut(s) | 568, 583 |
| EcoT14I | CCWWGG | 2 cut(s) | 1783, 2037 |
| EcoT22I | ATGCAT | 1 cut(s) | 1036 |
| ErhI | CCWWGG | 2 cut(s) | 1783, 2037 |
| FauI | CCCGC | 1 cut(s) | 187 |
| FbaI | TGATCA | 2 cut(s) | 1335, 2122 |
| Fnu4HI | GCNGC | 3 cut(s) | 285, 420, 1248 |
| Fsp4HI | GCNGC | 3 cut(s) | 285, 420, 1248 |
| FspBI | CTAG | 8 cut(s) | 33, 60, 159, 291, 342, 522, 1829, 1968 |
| GluI | GCNGC | 3 cut(s) | 285, 420, 1248 |
| HapII | CCGG | 4 cut(s) | 39, 54, 498, 906 |
| HincII | GTYRAC | 3 cut(s) | 49, 1681, 1835 |
| HindII | GTYRAC | 3 cut(s) | 49, 1681, 1835 |
| HindIII | AAGCTT | 1 cut(s) | 659 |
| HinfI | GANTC | 7 cut(s) | 685, 833, 1093, 1454, 1543, 2033, 2045 |
| HpaI | GTTAAC | 2 cut(s) | 49, 1681 |
| HpaII | CCGG | 4 cut(s) | 39, 54, 498, 906 |
| HphI | GGTGA | 3 cut(s) | 265, 485, 2033 |
| Hpy166II | GTNNAC | 3 cut(s) | 49, 1681, 1835 |
| Hpy188I | TCNGA | 5 cut(s) | 540, 709, 762, 1060, 1564 |
| Hpy188III | TCNNGA | 7 cut(s) | 77, 315, 982, 1078, 1339, 1451, 2126 |
| Hpy8I | GTNNAC | 3 cut(s) | 49, 1681, 1835 |
| HpyCH4III | ACNGT | 3 cut(s) | 108, 149, 785 |
| HpyCH4IV | ACGT | 1 cut(s) | 1302 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 129, 200, 236, 386, 658, 917, 1016 |
| HpyF3I | CTNAG | 7 cut(s) | 246, 451, 599, 1059, 1317, 1571, 1643 |
| HpySE526I | ACGT | 1 cut(s) | 1302 |
| Ksp22I | TGATCA | 2 cut(s) | 1335, 2122 |
| KspAI | GTTAAC | 2 cut(s) | 49, 1681 |
| Kzo9I | GATC | 5 cut(s) | 87, 802, 1335, 1666, 2122 |
| LmnI | GCTCC | 7 cut(s) | 68, 292, 460, 649, 1159, 1759, 1787 |
| Lsp1109I | GCAGC | 3 cut(s) | 296, 406, 1259 |
| LweI | GCATC | 4 cut(s) | 700, 1021, 1459, 1723 |
| MaeI | CTAG | 8 cut(s) | 33, 60, 159, 291, 342, 522, 1829, 1968 |
| MaeII | ACGT | 1 cut(s) | 1302 |
| MaeIII | GTNAC | 4 cut(s) | 217, 572, 874, 1982 |
| MalI | GATC | 5 cut(s) | 89, 804, 1337, 1668, 2124 |
| MboI | GATC | 5 cut(s) | 87, 802, 1335, 1666, 2122 |
| MfeI | CAATTG | 1 cut(s) | 1522 |
| MlyI | GAGTC | 3 cut(s) | 694, 1463, 2054 |
| MmeI | TCCRAC | 3 cut(s) | 1022, 1996, 2035 |
| Mph1103I | ATGCAT | 1 cut(s) | 1036 |
| MseI | TTAA | 8 cut(s) | 48, 275, 732, 968, 1119, 1487, 1680, 2115 |
| MslI | CAYNNNNRTG | 1 cut(s) | 109 |
| MspA1I | CMGCKG | 2 cut(s) | 194, 419 |
| MspI | CCGG | 4 cut(s) | 39, 54, 498, 906 |
| MspR9I | CCNGG | 3 cut(s) | 40, 570, 585 |
| MunI | CAATTG | 1 cut(s) | 1522 |
| Mva1269I | GAATGC | 2 cut(s) | 266, 286 |
| MvaI | CCWGG | 2 cut(s) | 570, 585 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 129, 200, 236, 386, 658, 917, 1016 |
| NciI | CCSGG | 1 cut(s) | 40 |
| NcoI | CCATGG | 1 cut(s) | 1783 |
| NdeII | GATC | 5 cut(s) | 87, 802, 1335, 1666, 2122 |
| NlaIV | GGNNCC | 4 cut(s) | 651, 910, 1761, 1797 |
| NsiI | ATGCAT | 1 cut(s) | 1036 |
| NspI | RCATGY | 2 cut(s) | 299, 1038 |
| OliI | CACNNNNGTG | 1 cut(s) | 109 |
| PagI | TCATGA | 1 cut(s) | 2125 |
| PciI | ACATGT | 1 cut(s) | 295 |
| PctI | GAATGC | 2 cut(s) | 266, 286 |
| PfeI | GAWTC | 4 cut(s) | 833, 1093, 1543, 2033 |
| PinAI | ACCGGT | 1 cut(s) | 497 |
| PkrI | GCNGC | 3 cut(s) | 286, 421, 1249 |
| PleI | GAGTC | 3 cut(s) | 693, 1462, 2053 |
| PpsI | GAGTC | 3 cut(s) | 693, 1462, 2053 |
| Ppu21I | YACGTR | 1 cut(s) | 1303 |
| PscI | ACATGT | 1 cut(s) | 295 |
| PshBI | ATTAAT | 2 cut(s) | 275, 732 |
| Psp6I | CCWGG | 2 cut(s) | 568, 583 |
| PspEI | GGTNACC | 1 cut(s) | 874 |
| PspGI | CCWGG | 2 cut(s) | 568, 583 |
| PspN4I | GGNNCC | 4 cut(s) | 651, 910, 1761, 1797 |
| PspPI | GGNCC | 2 cut(s) | 603, 758 |
| PstNI | CAGNNNCTG | 4 cut(s) | 422, 1058, 1253, 1352 |
| PvuII | CAGCTG | 1 cut(s) | 419 |
| RsaI | GTAC | 6 cut(s) | 58, 140, 346, 491, 1553, 1873 |
| RsaNI | GTAC | 6 cut(s) | 57, 139, 345, 490, 1552, 1872 |
| RseI | CAYNNNNRTG | 1 cut(s) | 109 |
| SaqAI | TTAA | 8 cut(s) | 48, 275, 732, 968, 1119, 1487, 1680, 2115 |
| SatI | GCNGC | 3 cut(s) | 285, 420, 1248 |
| Sau3AI | GATC | 5 cut(s) | 87, 802, 1335, 1666, 2122 |
| Sau96I | GGNCC | 2 cut(s) | 603, 758 |
| ScaI | AGTACT | 2 cut(s) | 1553, 1873 |
| SchI | GAGTC | 3 cut(s) | 694, 1463, 2054 |
| ScrFI | CCNGG | 3 cut(s) | 40, 570, 585 |
| SfaNI | GCATC | 4 cut(s) | 700, 1021, 1459, 1723 |
| SfcI | CTRYAG | 2 cut(s) | 1423, 1555 |
| SgrAI | CRCCGGYG | 1 cut(s) | 497 |
| SinI | GGWCC | 2 cut(s) | 603, 758 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 109 |
| SmlI | CTYRAG | 2 cut(s) | 2063, 2144 |
| SmoI | CTYRAG | 2 cut(s) | 2063, 2144 |
| SnaBI | TACGTA | 1 cut(s) | 1303 |
| SpeI | ACTAGT | 2 cut(s) | 59, 341 |
| SsiI | CCGC | 3 cut(s) | 194, 1019, 1472 |
| SspI | AATATT | 2 cut(s) | 634, 988 |
| SspMI | CTAG | 8 cut(s) | 33, 60, 159, 291, 342, 522, 1829, 1968 |
| StyD4I | CCNGG | 3 cut(s) | 38, 568, 583 |
| StyI | CCWWGG | 2 cut(s) | 1783, 2037 |
| TaaI | ACNGT | 3 cut(s) | 108, 149, 785 |
| TaiI | ACGT | 1 cut(s) | 1305 |
| TaqI | TCGA | 1 cut(s) | 1669 |
| TatI | WGTACW | 4 cut(s) | 138, 489, 1551, 1871 |
| TfiI | GAWTC | 4 cut(s) | 833, 1093, 1543, 2033 |
| Tru1I | TTAA | 8 cut(s) | 48, 275, 732, 968, 1119, 1487, 1680, 2115 |
| Tru9I | TTAA | 8 cut(s) | 48, 275, 732, 968, 1119, 1487, 1680, 2115 |
| TscAI | CASTG | 1 cut(s) | 1357 |
| TseI | GCWGC | 3 cut(s) | 284, 419, 1247 |
| TspRI | CASTG | 1 cut(s) | 1357 |
| VpaK11BI | GGWCC | 2 cut(s) | 603, 758 |
| VspI | ATTAAT | 2 cut(s) | 275, 732 |
| XapI | RAATTY | 3 cut(s) | 116, 794, 1688 |
| XceI | RCATGY | 2 cut(s) | 299, 1038 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 844 |
| XspI | CTAG | 8 cut(s) | 33, 60, 159, 291, 342, 522, 1829, 1968 |
| ZrmI | AGTACT | 2 cut(s) | 1553, 1873 |
| Zsp2I | ATGCAT | 1 cut(s) | 1036 |