Encoded by
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF659 | PF04937 | 383 - 543 | 4.2e-44 | Domain of unknown function (DUF659) |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 708, 1155 |
| AarI | CACCTGC | 1 cut(s) | 974 |
| Acc36I | ACCTGC | 1 cut(s) | 974 |
| AccII | CGCG | 3 cut(s) | 10, 380, 382 |
| AciI | CCGC | 5 cut(s) | 10, 337, 462, 468, 581 |
| AclWI | GGATC | 1 cut(s) | 1374 |
| AcsI | RAATTY | 1 cut(s) | 1345 |
| AcuI | CTGAAG | 2 cut(s) | 981, 1371 |
| AcvI | CACGTG | 1 cut(s) | 455 |
| AfaI | GTAC | 2 cut(s) | 169, 559 |
| AgeI | ACCGGT | 2 cut(s) | 1061, 1615 |
| AleI | CACNNNNGTG | 2 cut(s) | 622, 725 |
| AluBI | AGCT | 6 cut(s) | 899, 909, 959, 1121, 1225, 1571 |
| AluI | AGCT | 6 cut(s) | 899, 909, 959, 1121, 1225, 1571 |
| Alw21I | GWGCWC | 3 cut(s) | 454, 619, 946 |
| Alw26I | GTCTC | 2 cut(s) | 153, 720 |
| AlwI | GGATC | 1 cut(s) | 1374 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 959 |
| ApoI | RAATTY | 1 cut(s) | 1345 |
| AseI | ATTAAT | 1 cut(s) | 1296 |
| AsiGI | ACCGGT | 2 cut(s) | 1061, 1615 |
| AspLEI | GCGC | 3 cut(s) | 380, 382, 384 |
| AspS9I | GGNCC | 3 cut(s) | 587, 1269, 1322 |
| AsuC2I | CCSGG | 1 cut(s) | 1134 |
| AsuHPI | GGTGA | 3 cut(s) | 829, 941, 1049 |
| AvaII | GGWCC | 3 cut(s) | 587, 1269, 1322 |
| BbrPI | CACGTG | 1 cut(s) | 455 |
| BbsI | GAAGAC | 9 cut(s) | 98, 123, 135, 172, 183, 211, 228, 288, 1291 |
| Bbv12I | GWGCWC | 3 cut(s) | 454, 619, 946 |
| BccI | CCATC | 3 cut(s) | 880, 1256, 1297 |
| BciVI | GTATCC | 2 cut(s) | 1503, 1602 |
| BclI | TGATCA | 1 cut(s) | 1687 |
| BcnI | CCSGG | 1 cut(s) | 1134 |
| BcoDI | GTCTC | 2 cut(s) | 153, 720 |
| BfmI | CTRYAG | 1 cut(s) | 405 |
| BfuAI | ACCTGC | 1 cut(s) | 974 |
| BfuI | GTATCC | 2 cut(s) | 1503, 1602 |
| Bme1390I | CCNGG | 1 cut(s) | 1134 |
| Bme18I | GGWCC | 3 cut(s) | 587, 1269, 1322 |
| BmgT120I | GGNCC | 3 cut(s) | 587, 1269, 1322 |
| BmiI | GGNNCC | 1 cut(s) | 589 |
| BmrFI | CCNGG | 1 cut(s) | 1134 |
| BmsI | GCATC | 3 cut(s) | 1203, 1264, 1742 |
| BpiI | GAAGAC | 9 cut(s) | 98, 123, 135, 172, 183, 211, 228, 288, 1291 |
| BpuEI | CTTGAG | 4 cut(s) | 1220, 1529, 1551, 1736 |
| BpuMI | CCSGG | 1 cut(s) | 1134 |
| BsaAI | YACGTR | 1 cut(s) | 455 |
| BsaI | GGTCTC | 1 cut(s) | 720 |
| BsaJI | CCNNGG | 1 cut(s) | 25 |
| BsaWI | WCCGGW | 2 cut(s) | 1061, 1615 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 331, 361, 747, 777 |
| Bse118I | RCCGGY | 4 cut(s) | 554, 1061, 1469, 1615 |
| Bse1I | ACTGG | 1 cut(s) | 697 |
| Bse3DI | GCAATG | 1 cut(s) | 571 |
| BseDI | CCNNGG | 1 cut(s) | 25 |
| BseGI | GGATG | 4 cut(s) | 1034, 1056, 1591, 1633 |
| BseMI | GCAATG | 1 cut(s) | 571 |
| BseMII | CTCAG | 1 cut(s) | 815 |
| BseNI | ACTGG | 1 cut(s) | 697 |
| BsePI | GCGCGC | 2 cut(s) | 378, 380 |
| BseRI | GAGGAG | 5 cut(s) | 141, 234, 294, 768, 864 |
| Bsh1236I | CGCG | 3 cut(s) | 10, 380, 382 |
| BshTI | ACCGGT | 2 cut(s) | 1061, 1615 |
| BsiHKAI | GWGCWC | 3 cut(s) | 454, 619, 946 |
| BsiSI | CCGG | 5 cut(s) | 555, 1062, 1133, 1470, 1616 |
| BslFI | GGGAC | 3 cut(s) | 448, 573, 670 |
| BsmAI | GTCTC | 2 cut(s) | 153, 720 |
| BsmBI | CGTCTC | 1 cut(s) | 153 |
| BsmFI | GGGAC | 3 cut(s) | 448, 573, 670 |
| BsmI | GAATGC | 1 cut(s) | 1004 |
| Bso31I | GGTCTC | 1 cut(s) | 720 |
| Bsp1286I | GDGCHC | 3 cut(s) | 454, 619, 946 |
| Bsp143I | GATC | 2 cut(s) | 1366, 1687 |
| BspACI | CCGC | 5 cut(s) | 10, 337, 462, 468, 581 |
| BspCNI | CTCAG | 1 cut(s) | 814 |
| BspFNI | CGCG | 3 cut(s) | 10, 380, 382 |
| BspLI | GGNNCC | 1 cut(s) | 589 |
| BspMAI | CTGCAG | 1 cut(s) | 409 |
| BspMI | ACCTGC | 1 cut(s) | 974 |
| BspPI | GGATC | 1 cut(s) | 1374 |
| BspQI | GCTCTTC | 1 cut(s) | 916 |
| BspTNI | GGTCTC | 1 cut(s) | 720 |
| BsrDI | GCAATG | 1 cut(s) | 571 |
| BsrFI | RCCGGY | 4 cut(s) | 554, 1061, 1469, 1615 |
| BsrI | ACTGG | 1 cut(s) | 697 |
| BssAI | RCCGGY | 4 cut(s) | 554, 1061, 1469, 1615 |
| BssECI | CCNNGG | 1 cut(s) | 25 |
| BssHII | GCGCGC | 2 cut(s) | 378, 380 |
| BssMI | GATC | 2 cut(s) | 1366, 1687 |
| BssT1I | CCWWGG | 1 cut(s) | 25 |
| Bst4CI | ACNGT | 1 cut(s) | 769 |
| Bst6I | CTCTTC | 4 cut(s) | 159, 312, 348, 916 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 989 |
| BstBAI | YACGTR | 1 cut(s) | 455 |
| BstC8I | GCNNGC | 3 cut(s) | 380, 382, 1227 |
| BstDEI | CTNAG | 1 cut(s) | 801 |
| BstEII | GGTNACC | 1 cut(s) | 763 |
| BstF5I | GGATG | 4 cut(s) | 1034, 1056, 1591, 1633 |
| BstFNI | CGCG | 3 cut(s) | 10, 380, 382 |
| BstHHI | GCGC | 3 cut(s) | 380, 382, 384 |
| BstKTI | GATC | 2 cut(s) | 1369, 1690 |
| BstMAI | GTCTC | 2 cut(s) | 153, 720 |
| BstMBI | GATC | 2 cut(s) | 1366, 1687 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 92, 117, 271, 331, 950, 989, 1222, 1481 |
| BstPI | GGTNACC | 1 cut(s) | 763 |
| BstSCI | CCNGG | 1 cut(s) | 1132 |
| BstSFI | CTRYAG | 1 cut(s) | 405 |
| BstUI | CGCG | 3 cut(s) | 10, 380, 382 |
| BstV2I | GAAGAC | 9 cut(s) | 98, 123, 135, 172, 183, 211, 228, 288, 1291 |
| BsuI | GTATCC | 2 cut(s) | 1503, 1602 |
| BtsCI | GGATG | 4 cut(s) | 1034, 1056, 1591, 1633 |
| BtsI | GCAGTG | 1 cut(s) | 689 |
| BtsIMutI | CAGTG | 1 cut(s) | 689 |
| BveI | ACCTGC | 1 cut(s) | 974 |
| Cac8I | GCNNGC | 3 cut(s) | 380, 382, 1227 |
| CaiI | CAGNNNCTG | 1 cut(s) | 959 |
| CfoI | GCGC | 3 cut(s) | 380, 382, 384 |
| Cfr10I | RCCGGY | 4 cut(s) | 554, 1061, 1469, 1615 |
| Cfr13I | GGNCC | 3 cut(s) | 587, 1269, 1322 |
| CseI | GACGC | 1 cut(s) | 129 |
| Csp6I | GTAC | 2 cut(s) | 168, 558 |
| CspAI | ACCGGT | 2 cut(s) | 1061, 1615 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1711, 1746 |
| CviAII | CATG | 4 cut(s) | 902, 1230, 1515, 1661 |
| CviQI | GTAC | 2 cut(s) | 168, 558 |
| DdeI | CTNAG | 1 cut(s) | 801 |
| DpnI | GATC | 2 cut(s) | 1368, 1689 |
| DpnII | GATC | 2 cut(s) | 1366, 1687 |
| Eam1104I | CTCTTC | 4 cut(s) | 159, 312, 348, 916 |
| EarI | CTCTTC | 4 cut(s) | 159, 312, 348, 916 |
| Eco130I | CCWWGG | 1 cut(s) | 25 |
| Eco31I | GGTCTC | 1 cut(s) | 720 |
| Eco47I | GGWCC | 3 cut(s) | 587, 1269, 1322 |
| Eco57I | CTGAAG | 2 cut(s) | 981, 1371 |
| Eco72I | CACGTG | 1 cut(s) | 455 |
| Eco91I | GGTNACC | 1 cut(s) | 763 |
| EcoO65I | GGTNACC | 1 cut(s) | 763 |
| EcoT14I | CCWWGG | 1 cut(s) | 25 |
| ErhI | CCWWGG | 1 cut(s) | 25 |
| Esp3I | CGTCTC | 1 cut(s) | 153 |
| FaeI | CATG | 4 cut(s) | 905, 1233, 1518, 1664 |
| FaqI | GGGAC | 3 cut(s) | 448, 573, 670 |
| FatI | CATG | 4 cut(s) | 901, 1229, 1514, 1660 |
| FauI | CCCGC | 1 cut(s) | 3 |
| FbaI | TGATCA | 1 cut(s) | 1687 |
| FokI | GGATG | 4 cut(s) | 1041, 1063, 1598, 1640 |
| GlaI | GCGC | 3 cut(s) | 379, 381, 383 |
| HapII | CCGG | 5 cut(s) | 555, 1062, 1133, 1470, 1616 |
| HgaI | GACGC | 1 cut(s) | 129 |
| HhaI | GCGC | 3 cut(s) | 380, 382, 384 |
| Hin1II | CATG | 4 cut(s) | 905, 1233, 1518, 1664 |
| Hin6I | GCGC | 3 cut(s) | 378, 380, 382 |
| HinP1I | GCGC | 3 cut(s) | 378, 380, 382 |
| HincII | GTYRAC | 1 cut(s) | 784 |
| HindII | GTYRAC | 1 cut(s) | 784 |
| HindIII | AAGCTT | 2 cut(s) | 1223, 1569 |
| HinfI | GANTC | 9 cut(s) | 340, 569, 1195, 1204, 1287, 1397, 1510, 1534, 1657 |
| HpaII | CCGG | 5 cut(s) | 555, 1062, 1133, 1470, 1616 |
| HphI | GGTGA | 3 cut(s) | 829, 941, 1049 |
| Hpy166II | GTNNAC | 1 cut(s) | 784 |
| Hpy188I | TCNGA | 4 cut(s) | 804, 1104, 1273, 1351 |
| Hpy188III | TCNNGA | 6 cut(s) | 415, 590, 1199, 1291, 1546, 1753 |
| Hpy8I | GTNNAC | 1 cut(s) | 784 |
| HpyCH4III | ACNGT | 1 cut(s) | 769 |
| HpyCH4IV | ACGT | 2 cut(s) | 33, 454 |
| HpyCH4V | TGCA | 9 cut(s) | 407, 494, 542, 828, 1229, 1277, 1432, 1557, 1733 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 92, 117, 271, 331, 950, 989, 1222, 1481 |
| HpyF3I | CTNAG | 1 cut(s) | 801 |
| HpySE526I | ACGT | 2 cut(s) | 33, 454 |
| Hsp92II | CATG | 4 cut(s) | 905, 1233, 1518, 1664 |
| HspAI | GCGC | 3 cut(s) | 378, 380, 382 |
| Ksp22I | TGATCA | 1 cut(s) | 1687 |
| Kzo9I | GATC | 2 cut(s) | 1366, 1687 |
| LguI | GCTCTTC | 1 cut(s) | 916 |
| LmnI | GCTCC | 3 cut(s) | 851, 1456, 1723 |
| LweI | GCATC | 3 cut(s) | 1203, 1264, 1742 |
| MaeII | ACGT | 2 cut(s) | 33, 454 |
| MaeIII | GTNAC | 4 cut(s) | 686, 763, 929, 1438 |
| MalI | GATC | 2 cut(s) | 1368, 1689 |
| MboI | GATC | 2 cut(s) | 1366, 1687 |
| MfeI | CAATTG | 2 cut(s) | 1208, 1373 |
| MhlI | GDGCHC | 3 cut(s) | 454, 619, 946 |
| MlyI | GAGTC | 3 cut(s) | 334, 1281, 1504 |
| MmeI | TCCRAC | 2 cut(s) | 653, 1586 |
| MseI | TTAA | 7 cut(s) | 204, 549, 636, 1019, 1296, 1641, 1761 |
| MslI | CAYNNNNRTG | 2 cut(s) | 622, 725 |
| MspA1I | CMGCKG | 1 cut(s) | 959 |
| MspI | CCGG | 5 cut(s) | 555, 1062, 1133, 1470, 1616 |
| MspR9I | CCNGG | 1 cut(s) | 1134 |
| MunI | CAATTG | 2 cut(s) | 1208, 1373 |
| Mva1269I | GAATGC | 1 cut(s) | 1004 |
| MvnI | CGCG | 3 cut(s) | 10, 380, 382 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 92, 117, 271, 331, 950, 989, 1222, 1481 |
| NciI | CCSGG | 1 cut(s) | 1134 |
| NdeII | GATC | 2 cut(s) | 1366, 1687 |
| NlaIII | CATG | 4 cut(s) | 905, 1233, 1518, 1664 |
| NlaIV | GGNNCC | 1 cut(s) | 589 |
| NmuCI | GTSAC | 2 cut(s) | 929, 1438 |
| OliI | CACNNNNGTG | 2 cut(s) | 622, 725 |
| PaqCI | CACCTGC | 1 cut(s) | 974 |
| PauI | GCGCGC | 2 cut(s) | 378, 380 |
| PciSI | GCTCTTC | 1 cut(s) | 916 |
| PctI | GAATGC | 1 cut(s) | 1004 |
| PfeI | GAWTC | 6 cut(s) | 569, 1195, 1204, 1397, 1534, 1657 |
| PinAI | ACCGGT | 2 cut(s) | 1061, 1615 |
| PleI | GAGTC | 3 cut(s) | 334, 1281, 1504 |
| PmaCI | CACGTG | 1 cut(s) | 455 |
| PmlI | CACGTG | 1 cut(s) | 455 |
| PpsI | GAGTC | 3 cut(s) | 334, 1281, 1504 |
| Ppu21I | YACGTR | 1 cut(s) | 455 |
| PshBI | ATTAAT | 1 cut(s) | 1296 |
| PsiI | TTATAA | 2 cut(s) | 708, 1155 |
| PspCI | CACGTG | 1 cut(s) | 455 |
| PspEI | GGTNACC | 1 cut(s) | 763 |
| PspN4I | GGNNCC | 1 cut(s) | 589 |
| PspPI | GGNCC | 3 cut(s) | 587, 1269, 1322 |
| PstI | CTGCAG | 1 cut(s) | 409 |
| PstNI | CAGNNNCTG | 1 cut(s) | 959 |
| PteI | GCGCGC | 2 cut(s) | 378, 380 |
| PvuII | CAGCTG | 1 cut(s) | 959 |
| RsaI | GTAC | 2 cut(s) | 169, 559 |
| RsaNI | GTAC | 2 cut(s) | 168, 558 |
| RseI | CAYNNNNRTG | 2 cut(s) | 622, 725 |
| SapI | GCTCTTC | 1 cut(s) | 916 |
| SaqAI | TTAA | 7 cut(s) | 204, 549, 636, 1019, 1296, 1641, 1761 |
| Sau3AI | GATC | 2 cut(s) | 1366, 1687 |
| Sau96I | GGNCC | 3 cut(s) | 587, 1269, 1322 |
| SchI | GAGTC | 3 cut(s) | 334, 1281, 1504 |
| ScrFI | CCNGG | 1 cut(s) | 1134 |
| SduI | GDGCHC | 3 cut(s) | 454, 619, 946 |
| SfaNI | GCATC | 3 cut(s) | 1203, 1264, 1742 |
| SfcI | CTRYAG | 1 cut(s) | 405 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1061 |
| SinI | GGWCC | 3 cut(s) | 587, 1269, 1322 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 622, 725 |
| SmlI | CTYRAG | 4 cut(s) | 1199, 1544, 1566, 1751 |
| SmoI | CTYRAG | 4 cut(s) | 1199, 1544, 1566, 1751 |
| SsiI | CCGC | 5 cut(s) | 10, 337, 462, 468, 581 |
| SspI | AATATT | 1 cut(s) | 1552 |
| StyD4I | CCNGG | 1 cut(s) | 1132 |
| StyI | CCWWGG | 1 cut(s) | 25 |
| TaaI | ACNGT | 1 cut(s) | 769 |
| TaiI | ACGT | 2 cut(s) | 36, 457 |
| TaqII | GACCGA | 1 cut(s) | 1457 |
| TatI | WGTACW | 1 cut(s) | 167 |
| TfiI | GAWTC | 6 cut(s) | 569, 1195, 1204, 1397, 1534, 1657 |
| Tru1I | TTAA | 7 cut(s) | 204, 549, 636, 1019, 1296, 1641, 1761 |
| Tru9I | TTAA | 7 cut(s) | 204, 549, 636, 1019, 1296, 1641, 1761 |
| TscAI | CASTG | 1 cut(s) | 689 |
| TseFI | GTSAC | 2 cut(s) | 929, 1438 |
| Tsp45I | GTSAC | 2 cut(s) | 929, 1438 |
| TspRI | CASTG | 1 cut(s) | 689 |
| VpaK11BI | GGWCC | 3 cut(s) | 587, 1269, 1322 |
| VspI | ATTAAT | 1 cut(s) | 1296 |
| XapI | RAATTY | 1 cut(s) | 1345 |