FvH4_6g26310
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000371
Physical Location & Seq
Reverse (-)
20130234 .. 20131973
1740 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g26310.t1

Sequence Viewer

Length: 1740 bp
ATGGCCAACGTTCCGGTAGGTTTCCGGTTCCACCCGACGGACGAGGAGCTCATCCGGCACTACCTGTATCTGAAGAACAAGGTGATCAAGGGCCCAGCTGAGGAGGAGGCGGCGGCGGTGGTGCCGGAGGTTGATCTGTACGGGGAGACGGAGCCGTGGAGGATTTGGGAAGCCCACGGCGGAGCGGATCTGTACGACCAGGACCTGTTCTTCTTCACGAAGCTGAAGAAGGTGAACCCACACGGCACGCGGATTAATCGCAAGATTGGGACGGGGACTTGGAGCGAAGGCGAGCCGTCCAGACCCATTTTCGTCGGGGAAAAGAAGAACAAAACCCCAATCGGCCGCAAGAGGAAGTTCCGGTATGAGAACAAGTCATCCGACCACCACGGCTGTTGGTACATGGAGGAGTACAGCCTCGACGGCATCAAATCCGCCGATTACGTCATTTGCCGGCTGCGGGAGAACAACAGATCTGGAGGCGGCGGCACGGGAGGGAATAGGGATTCGTTGGCCATATCGGTGGCGGCGTCGATGGAGGCTTCTGGGCCCATTCCGGTGGGGTTTAGGTTCCATCCTACCGATCAGGAGCTGATCTGTTACTTTCTGTATAATAAGAACAAGGGGAAGGGCGGCAGAGGGCTAGCGATGTTCATGGCGGAGGAGGCGGAGGCGGAGGCGGAGGAGGAGAAAATTAAGGCCTTACCGGCGGCGGAGGGACAAGCGGAGCTTCCAGAGGACAAGAACAACACCAACGAGAAAGAAGGCCAAGCGCCGCCTCCGGAAGTCGAGGAGAAGAAGAACAACGGCGAAAACGAAGCGGCGGCGGTGGTACCAGTGGAGGAGGAGGAGAAGAAAAAGGACAAGGGGAAGGAGAAGAAAACGGAGGGAGAGATGCAAGCAGCTCCGCTGCTGTTACTGGAGTACATGAAAGACAACCAGGAGGATGAGACGCTGCTGCCAAGGGAGGTGGAGGTAGGTAAGAAAGAGAACATGTTTTTGCATGAGTTTGATCTTTTTGGGAGCACGGAGCCTTGGGAAATATGGGAGATGTTTAGGGGAGCTGAATTGTGTAACCAGGACTTGTTCTTCTTTACACAATTGAAGAAGGTAAACCCCAAGGGCTCACGCATTGGGCGAAAGGTTGGATCCGGCGGTACTTGGAGTGAAGGAGATGTCTCCAAGCCCATTGTTGATGACAGAACTGGAAATCCTATTGGCCGAAAGAGGAAGTTGAGGTATGAGAAGGTTGGCTCCCCACACCATGCATGTTGGTATTTGGATGAGTATAGTCTGCTTGATGCTGATATTGGAGATTATGTCATTTGTCGACTCCGAAAGAATGACAAGTTAGCAGCAGCTGCATTCTCATCCGCTGAAGCTGTCAACAACAGGAAGAGGAAAGCCACTCCTTCCACCACTCCTGCTACTGCAGAAGAATCAAAACAACCTCCCACCGCAGCTGAAGAATCAAAACAACCTCCCGCTACCGCAGAAGAATCACAAGCTCTCGCTCTCGCTACCGCAGAAGAATCAAAACAACCTCCCGCTACCGCAGAAGAATCGAAACAGGAGGAGGACTCATCAAAGGCAAAGCGAAGGCGCATTACTGGGCTCACACAAGTAGAGGAAGCAGCAGCAGATGTGTTGATGAATATGGCCAACAGCACCCTCAACCACAACACATTGAAACTGTTTGGTATTGAAATTGGTTCCACTCCTATTATAGGAGGTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

580

Amino Acids

64.47

Weight (kDa)

5.42

Isoelectric Point (pI)

45.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 5 - 140 2.3e-26 No apical meristem (NAM) protein
NAM PF02365 319 - 432 6.2e-13 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000371)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g30540 FvH4_5g31040 FvH4_5g34901 FvH4_5g34902 FvH4_5g35290 FvH4_6g26310 FvH4_6g26330 FvH4_6g51360
malus_domestica MD03G1130400.v1.1 MD05G1005400.v1.1 MD05G1030600.v1.1 MD11G1074200.v1.1 MD11G1075500.v1.1 MD11G1075600.v1.1 MD11G1138500.v1.1 MD13G1124900.v1.1 MD15G1393000.v1.1
prunus_persica Prupe.1G063700_v2.0.a1 Prupe.1G106100_v2.0.a1 Prupe.2G196800_v2.0.a1 Prupe.2G202600_v2.0.a1 Prupe.6G057300_v2.0.a1 Prupe.6G092100_v2.0.a1 Prupe.6G098300_v2.0.a1 Prupe.6G098400_v2.0.a1 Prupe.6G112000_v2.0.a1 Prupe.8G095200_v2.0.a1 Prupe.8G097100_v2.0.a1
pyrus_communis pycom03g04400 pycom03g04810 pycom04g03340 pycom11g06160 pycom11g06170 pycom11g06280 pycom12g00070
rosa_chinensis RchiOBHm_Chr2g0126751 RchiOBHm_Chr5g0047081 RchiOBHm_Chr7g0230611 RchiOBHm_Chr7g0236441 RchiOBHm_Chr7g0236481 RchiOBHm_Chr7g0236511
rosa_laevigata RLG00000001105 RLG00000001256 RLG00000018919 RLG00000018920 RLG00000022153
rosa_multiflora Rmu_co8144300.1_g000001 Rmu_sc0000007.1_g000005 Rmu_sc0000007.1_g000006 Rmu_sc0000070.1_g000054 Rmu_sc0000588.1_g000007 Rmu_sc0002222.1_g000014 Rmu_sc0002449.1_g000028 Rmu_sc0003747.1_g000001 Rmu_sc0005733.1_g000007 Rmu_sc0007784.1_g000006 Rmu_sc0011173.1_g000003 Rmu_sc0011236.1_g000004 Rmu_sc0014124.1_g000001
rosa_roxburghii Rroxscaffold_2G00116990 Rroxscaffold_4G00294750 Rroxscaffold_4G00294760 Rroxscaffold_4G00294800
rosa_rugosa Rorug02G0264600 Rorug02G0264600 Rorug02G0564800 Rorug02G0564900
rosa_samantha Rh1AG295700 Rh1AG301300 Rh1BG128600 Rh1BG128700 Rh1BG128800 Rh1CG282300 Rh1DG164800 Rh1DG164900 Rh2AG321700 Rh2AG321800 Rh2AG644400 Rh2AG644500 Rh2BG655200 Rh2BG655300 Rh2CG309500 Rh2CG309600 Rh2CG620500 Rh2DG668700 Rh3BG170600 Rh7AG434800 Rh7BG127300 Rh7BG423300 Rh7BG423700 Rh7BG424100 Rh7BG424200 Rh7CG383900 Rh7CG432200 Rh7CG453500 Rh7DG368300 Rh7DG409100 Rh7DG438400
rosa_wichuraiana Rw0G020640 Rw2G026070 Rw2G026080 Rw5G020070 Rw7G037290 Rw7G037330 Rw7G037540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 832
AccB1I GGYRCC 2 cut(s) 121, 832
AccBSI CCGCTC 1 cut(s) 185
AccI GTMKAC 1 cut(s) 1330
AccII CGCG 1 cut(s) 250
AccIII TCCGGA 1 cut(s) 781
AclI AACGTT 1 cut(s) 9
AclWI GGATC 3 cut(s) 195, 1143, 1156
AcoI YGGCCR 5 cut(s) 3, 343, 513, 1219, 1659
AcuI CTGAAG 4 cut(s) 92, 245, 1398, 1485
AcyI GRCGYC 1 cut(s) 530
AfaI GTAC 7 cut(s) 140, 194, 401, 413, 834, 926, 1159
AfiI CCNNNNNNNGG 4 cut(s) 37, 100, 460, 1727
AflIII ACRYGT 1 cut(s) 993
AgsI TTSAA 3 cut(s) 1105, 1690, 1706
AjnI CCWGG 3 cut(s) 198, 939, 1077
AloI GAACNNNNNNTCC 4 cut(s) 362, 394, 1195, 1227
Alw21I GWGCWC 2 cut(s) 51, 1028
Alw26I GTCTC 3 cut(s) 140, 944, 1183
AlwI GGATC 3 cut(s) 195, 1143, 1156
AlwNI CAGNNNCTG 3 cut(s) 205, 592, 1361
Aor13HI TCCGGA 1 cut(s) 781
AoxI GGCC 9 cut(s) 3, 91, 343, 513, 548, 699, 766, 1219, 1659
ApaI GGGCCC 2 cut(s) 95, 552
AseI ATTAAT 1 cut(s) 255
Asp718I GGTACC 1 cut(s) 832
AspLEI GCGC 2 cut(s) 775, 1605
AspS9I GGNCC 5 cut(s) 91, 92, 202, 548, 549
AsuHPI GGTGA 2 cut(s) 94, 244
AsuNHI GCTAGC 1 cut(s) 643
AvaII GGWCC 1 cut(s) 202
BaeGI GKGCMC 2 cut(s) 95, 552
BalI TGGCCA 3 cut(s) 5, 515, 1661
BamHI GGATCC 1 cut(s) 1148
BanI GGYRCC 2 cut(s) 121, 832
BanII GRGCYC 5 cut(s) 51, 95, 552, 1127, 1617
BarI GAAGNNNNNNTAC 2 cut(s) 1591, 1623
Bbv12I GWGCWC 2 cut(s) 51, 1028
BbvCI CCTCAGC 1 cut(s) 99
BccI CCATC 2 cut(s) 529, 582
BceAI ACGGC 7 cut(s) 139, 193, 259, 280, 406, 439, 823
BcgI CGANNNNNNTGC 2 cut(s) 1545, 1579
BciT130I CCWGG 3 cut(s) 200, 941, 1079
BclI TGATCA 1 cut(s) 84
BcoDI GTCTC 3 cut(s) 140, 944, 1183
BfaI CTAG 1 cut(s) 644
BfmI CTRYAG 1 cut(s) 1431
BfoI RGCGCY 1 cut(s) 776
BglI GCCNNNNNGGC 2 cut(s) 423, 707
BglII AGATCT 1 cut(s) 473
Bme1390I CCNGG 3 cut(s) 200, 941, 1079
Bme18I GGWCC 1 cut(s) 202
BmgT120I GGNCC 5 cut(s) 91, 92, 202, 548, 549
BmrFI CCNGG 3 cut(s) 200, 941, 1079
BmrI ACTGGG 1 cut(s) 1620
BmsI GCATC 3 cut(s) 435, 885, 1291
BmtI GCTAGC 1 cut(s) 647
BmuI ACTGGG 1 cut(s) 1620
BplI GAGNNNNNCTC 2 cut(s) 1565, 1597
BpmI CTGGAG 2 cut(s) 498, 941
Bpu10I CCTNAGC 1 cut(s) 99
BsaHI GRCGYC 1 cut(s) 530
BsaJI CCNNGG 6 cut(s) 155, 175, 388, 962, 1034, 1119
BsaWI WCCGGW 5 cut(s) 13, 24, 360, 556, 781
BsaXI ACNNNNNCTCC 2 cut(s) 1305, 1335
Bsc4I CCNNNNNNNGG 4 cut(s) 37, 100, 460, 1727
Bse118I RCCGGY 2 cut(s) 453, 706
Bse1I ACTGG 4 cut(s) 836, 924, 1210, 1615
BseAI TCCGGA 1 cut(s) 781
BseBI CCWGG 3 cut(s) 200, 941, 1079
BseDI CCNNGG 6 cut(s) 155, 175, 388, 962, 1034, 1119
BseGI GGATG 6 cut(s) 51, 377, 574, 952, 1288, 1370
BseLI CCNNNNNNNGG 4 cut(s) 37, 100, 460, 1727
BseMII CTCAG 1 cut(s) 90
BseNI ACTGG 4 cut(s) 836, 924, 1210, 1615
BseSI GKGCMC 2 cut(s) 95, 552
BseX3I CGGCCG 1 cut(s) 343
BseYI CCCAGC 1 cut(s) 94
Bsh1236I CGCG 1 cut(s) 250
Bsh1285I CGRYCG 1 cut(s) 346
BshFI GGCC 9 cut(s) 5, 93, 345, 515, 550, 701, 768, 1221, 1661
BshNI GGYRCC 2 cut(s) 121, 832
BsiEI CGRYCG 1 cut(s) 346
BsiHKAI GWGCWC 2 cut(s) 51, 1028
BslFI GGGAC 3 cut(s) 283, 289, 732
BslI CCNNNNNNNGG 4 cut(s) 37, 100, 460, 1727
BsmAI GTCTC 3 cut(s) 140, 944, 1183
BsmBI CGTCTC 2 cut(s) 140, 944
BsmFI GGGAC 3 cut(s) 283, 289, 732
BsmI GAATGC 1 cut(s) 1364
BsnI GGCC 9 cut(s) 5, 93, 345, 515, 550, 701, 768, 1221, 1661
Bsp120I GGGCCC 2 cut(s) 91, 548
Bsp1286I GDGCHC 6 cut(s) 51, 95, 552, 1028, 1127, 1617
Bsp13I TCCGGA 1 cut(s) 781
Bsp143I GATC 8 cut(s) 84, 133, 187, 473, 583, 594, 1012, 1148
BspANI GGCC 9 cut(s) 5, 93, 345, 515, 550, 701, 768, 1221, 1661
BspCNI CTCAG 1 cut(s) 91
BspEI TCCGGA 1 cut(s) 781
BspFNI CGCG 1 cut(s) 250
BspMAI CTGCAG 1 cut(s) 1435
BspOI GCTAGC 1 cut(s) 647
BspPI GGATC 3 cut(s) 195, 1143, 1156
BspT107I GGYRCC 2 cut(s) 121, 832
BsrBI CCGCTC 1 cut(s) 185
BsrFI RCCGGY 2 cut(s) 453, 706
BsrI ACTGG 4 cut(s) 836, 924, 1210, 1615
BssAI RCCGGY 2 cut(s) 453, 706
BssECI CCNNGG 6 cut(s) 155, 175, 388, 962, 1034, 1119
BssMI GATC 8 cut(s) 84, 133, 187, 473, 583, 594, 1012, 1148
BssNI GRCGYC 1 cut(s) 530
BssT1I CCWWGG 3 cut(s) 962, 1034, 1119
Bst2UI CCWGG 3 cut(s) 200, 941, 1079
Bst4CI ACNGT 1 cut(s) 1695
Bst6I CTCTTC 1 cut(s) 1391
BstACI GRCGYC 1 cut(s) 530
BstAPI GCANNNNNTGC 1 cut(s) 1361
BstC8I GCNNGC 5 cut(s) 248, 293, 455, 645, 900
BstDEI CTNAG 1 cut(s) 99
BstDSI CCRYGG 3 cut(s) 155, 175, 388
BstENI CCTNNNNNAGG 1 cut(s) 1725
BstF5I GGATG 6 cut(s) 51, 377, 574, 952, 1288, 1370
BstFNI CGCG 1 cut(s) 250
BstH2I RGCGCY 1 cut(s) 776
BstHHI GCGC 2 cut(s) 775, 1605
BstKTI GATC 8 cut(s) 87, 136, 190, 476, 586, 597, 1015, 1151
BstMAI GTCTC 3 cut(s) 140, 944, 1183
BstMBI GATC 8 cut(s) 84, 133, 187, 473, 583, 594, 1012, 1148
BstMCI CGRYCG 1 cut(s) 346
BstMWI GCNNNNNNNGC 5 cut(s) 55, 423, 665, 707, 1361
BstNI CCWGG 3 cut(s) 200, 941, 1079
BstNSI RCATGY 2 cut(s) 997, 1272
BstSCI CCNGG 3 cut(s) 198, 939, 1077
BstSFI CTRYAG 1 cut(s) 1431
BstSLI GKGCMC 2 cut(s) 95, 552
BstUI CGCG 1 cut(s) 250
BstX2I RGATCY 3 cut(s) 187, 473, 1148
BstXI CCANNNNNNTGG 2 cut(s) 523, 559
BstYI RGATCY 3 cut(s) 187, 473, 1148
BstZI CGGCCG 1 cut(s) 343
BsuRI GGCC 9 cut(s) 5, 93, 345, 515, 550, 701, 768, 1221, 1661
BtgI CCRYGG 3 cut(s) 155, 175, 388
BtgZI GCGATG 1 cut(s) 662
BtsCI GGATG 6 cut(s) 51, 377, 574, 952, 1288, 1370
BtsIMutI CAGTG 1 cut(s) 843
Cac8I GCNNGC 5 cut(s) 248, 293, 455, 645, 900
CaiI CAGNNNCTG 3 cut(s) 205, 592, 1361
CfoI GCGC 2 cut(s) 775, 1605
Cfr10I RCCGGY 2 cut(s) 453, 706
Cfr13I GGNCC 5 cut(s) 91, 92, 202, 548, 549
CseI GACGC 2 cut(s) 519, 961
Csp6I GTAC 7 cut(s) 139, 193, 400, 412, 833, 925, 1158
CspCI CAANNNNNGTGG 4 cut(s) 377, 412, 951, 986
CviAII CATG 7 cut(s) 403, 655, 928, 994, 1004, 1265, 1269
CviQI GTAC 7 cut(s) 139, 193, 400, 412, 833, 925, 1158
DdeI CTNAG 1 cut(s) 99
DpnI GATC 8 cut(s) 86, 135, 189, 475, 585, 596, 1014, 1150
DpnII GATC 8 cut(s) 84, 133, 187, 473, 583, 594, 1012, 1148
EaeI YGGCCR 5 cut(s) 3, 343, 513, 1219, 1659
EagI CGGCCG 1 cut(s) 343
Eam1104I CTCTTC 1 cut(s) 1391
EarI CTCTTC 1 cut(s) 1391
EciI GGCGGA 7 cut(s) 195, 424, 674, 683, 689, 695, 728
Ecl136II GAGCTC 1 cut(s) 49
EclXI CGGCCG 1 cut(s) 343
Eco130I CCWWGG 3 cut(s) 962, 1034, 1119
Eco147I AGGCCT 1 cut(s) 701
Eco24I GRGCYC 5 cut(s) 51, 95, 552, 1127, 1617
Eco47I GGWCC 1 cut(s) 202
Eco52I CGGCCG 1 cut(s) 343
Eco53kI GAGCTC 1 cut(s) 49
Eco57I CTGAAG 4 cut(s) 92, 245, 1398, 1485
EcoICRI GAGCTC 1 cut(s) 49
EcoNI CCTNNNNNAGG 1 cut(s) 1725
EcoO109I RGGNCCY 2 cut(s) 91, 202
EcoRII CCWGG 3 cut(s) 198, 939, 1077
EcoT14I CCWWGG 3 cut(s) 962, 1034, 1119
EcoT22I ATGCAT 1 cut(s) 1270
EcoT38I GRGCYC 5 cut(s) 51, 95, 552, 1127, 1617
ErhI CCWWGG 3 cut(s) 962, 1034, 1119
Esp3I CGTCTC 2 cut(s) 140, 944
FaeI CATG 7 cut(s) 406, 658, 931, 997, 1007, 1268, 1272
FalI AAGNNNNNCTT 2 cut(s) 714, 746
FaqI GGGAC 3 cut(s) 283, 289, 732
FatI CATG 7 cut(s) 402, 654, 927, 993, 1003, 1264, 1268
FauI CCCGC 3 cut(s) 453, 1492, 1555
FbaI TGATCA 1 cut(s) 84
FblI GTMKAC 1 cut(s) 1330
FokI GGATG 6 cut(s) 38, 364, 561, 959, 1295, 1357
FriOI GRGCYC 5 cut(s) 51, 95, 552, 1127, 1617
FspBI CTAG 1 cut(s) 644
GlaI GCGC 2 cut(s) 774, 1604
GsaI CCCAGC 1 cut(s) 98
GsuI CTGGAG 2 cut(s) 498, 941
HaeII RGCGCY 1 cut(s) 776
HaeIII GGCC 9 cut(s) 5, 93, 345, 515, 550, 701, 768, 1221, 1661
HgaI GACGC 2 cut(s) 519, 961
HhaI GCGC 2 cut(s) 775, 1605
Hin1I GRCGYC 1 cut(s) 530
Hin1II CATG 7 cut(s) 406, 658, 931, 997, 1007, 1268, 1272
Hin6I GCGC 2 cut(s) 773, 1603
HinP1I GCGC 2 cut(s) 773, 1603
HincII GTYRAC 2 cut(s) 1331, 1387
HindII GTYRAC 2 cut(s) 1331, 1387
HinfI GANTC 8 cut(s) 506, 1332, 1439, 1469, 1499, 1532, 1562, 1580
HphI GGTGA 2 cut(s) 94, 244
Hpy166II GTNNAC 4 cut(s) 235, 1114, 1331, 1387
Hpy188I TCNGA 3 cut(s) 72, 382, 1337
Hpy188III TCNNGA 6 cut(s) 217, 300, 477, 587, 734, 782
Hpy8I GTNNAC 4 cut(s) 235, 1114, 1331, 1387
Hpy99I CGWCG 4 cut(s) 40, 317, 425, 535
HpyCH4III ACNGT 1 cut(s) 1695
HpyCH4IV ACGT 2 cut(s) 9, 444
HpyCH4V TGCA 5 cut(s) 898, 1003, 1268, 1364, 1433
HpyF10VI GCNNNNNNNGC 5 cut(s) 55, 423, 665, 707, 1361
HpyF3I CTNAG 1 cut(s) 99
HpySE526I ACGT 2 cut(s) 9, 444
Hsp92I GRCGYC 1 cut(s) 530
Hsp92II CATG 7 cut(s) 406, 658, 931, 997, 1007, 1268, 1272
HspAI GCGC 2 cut(s) 773, 1603
Kpn2I TCCGGA 1 cut(s) 781
KpnI GGTACC 1 cut(s) 836
KroI GCCGGC 1 cut(s) 453
KroNI GCCGGC 1 cut(s) 455
Ksp22I TGATCA 1 cut(s) 84
Kzo9I GATC 8 cut(s) 84, 133, 187, 473, 583, 594, 1012, 1148
LweI GCATC 3 cut(s) 435, 885, 1291
MaeI CTAG 1 cut(s) 644
MaeII ACGT 2 cut(s) 9, 444
MaeIII GTNAC 3 cut(s) 599, 915, 1073
MalI GATC 8 cut(s) 86, 135, 189, 475, 585, 596, 1014, 1150
MbiI CCGCTC 1 cut(s) 185
MboI GATC 8 cut(s) 84, 133, 187, 473, 583, 594, 1012, 1148
MfeI CAATTG 1 cut(s) 1100
MflI RGATCY 3 cut(s) 187, 473, 1148
MhlI GDGCHC 6 cut(s) 51, 95, 552, 1028, 1127, 1617
MlsI TGGCCA 3 cut(s) 5, 515, 1661
MluCI AATT 4 cut(s) 693, 1067, 1100, 1707
MluNI TGGCCA 3 cut(s) 5, 515, 1661
MlyI GAGTC 2 cut(s) 1326, 1574
MmeI TCCRAC 2 cut(s) 405, 1126
Mox20I TGGCCA 3 cut(s) 5, 515, 1661
Mph1103I ATGCAT 1 cut(s) 1270
MroI TCCGGA 1 cut(s) 781
MroNI GCCGGC 1 cut(s) 453
MscI TGGCCA 3 cut(s) 5, 515, 1661
MseI TTAA 2 cut(s) 255, 696
MslI CAYNNNNRTG 2 cut(s) 521, 557
Msp20I TGGCCA 3 cut(s) 5, 515, 1661
MspA1I CMGCKG 5 cut(s) 98, 910, 1361, 1376, 1463
MspR9I CCNGG 3 cut(s) 200, 941, 1079
MunI CAATTG 1 cut(s) 1100
Mva1269I GAATGC 1 cut(s) 1364
MvaI CCWGG 3 cut(s) 200, 941, 1079
MvnI CGCG 1 cut(s) 250
MwoI GCNNNNNNNGC 5 cut(s) 55, 423, 665, 707, 1361
NaeI GCCGGC 1 cut(s) 455
NdeII GATC 8 cut(s) 84, 133, 187, 473, 583, 594, 1012, 1148
NgoMIV GCCGGC 1 cut(s) 453
NheI GCTAGC 1 cut(s) 643
NlaIII CATG 7 cut(s) 406, 658, 931, 997, 1007, 1268, 1272
NsiI ATGCAT 1 cut(s) 1270
NspI RCATGY 2 cut(s) 997, 1272
PceI AGGCCT 1 cut(s) 701
PciI ACATGT 1 cut(s) 993
PcsI WCGNNNNNNNCGW 3 cut(s) 527, 813, 1135
PctI GAATGC 1 cut(s) 1364
PdiI GCCGGC 1 cut(s) 455
PfeI GAWTC 6 cut(s) 506, 1439, 1469, 1499, 1532, 1562
PleI GAGTC 2 cut(s) 1326, 1574
PpsI GAGTC 2 cut(s) 1326, 1574
PpuMI RGGWCCY 1 cut(s) 202
PscI ACATGT 1 cut(s) 993
PshBI ATTAAT 1 cut(s) 255
Psp124BI GAGCTC 1 cut(s) 51
Psp1406I AACGTT 1 cut(s) 9
Psp5II RGGWCCY 1 cut(s) 202
Psp6I CCWGG 3 cut(s) 198, 939, 1077
PspFI CCCAGC 1 cut(s) 94
PspGI CCWGG 3 cut(s) 198, 939, 1077
PspOMI GGGCCC 2 cut(s) 91, 548
PspPI GGNCC 5 cut(s) 91, 92, 202, 548, 549
PspPPI RGGWCCY 1 cut(s) 202
PstI CTGCAG 1 cut(s) 1435
PstNI CAGNNNCTG 3 cut(s) 205, 592, 1361
PsuI RGATCY 3 cut(s) 187, 473, 1148
PvuII CAGCTG 3 cut(s) 98, 1361, 1463
RsaI GTAC 7 cut(s) 140, 194, 401, 413, 834, 926, 1159
RsaNI GTAC 7 cut(s) 139, 193, 400, 412, 833, 925, 1158
RseI CAYNNNNRTG 2 cut(s) 521, 557
SacI GAGCTC 1 cut(s) 51
SalI GTCGAC 1 cut(s) 1329
SaqAI TTAA 2 cut(s) 255, 696
Sau3AI GATC 8 cut(s) 84, 133, 187, 473, 583, 594, 1012, 1148
Sau96I GGNCC 5 cut(s) 91, 92, 202, 548, 549
SchI GAGTC 2 cut(s) 1326, 1574
ScrFI CCNGG 3 cut(s) 200, 941, 1079
SduI GDGCHC 6 cut(s) 51, 95, 552, 1028, 1127, 1617
SfaNI GCATC 3 cut(s) 435, 885, 1291
SfcI CTRYAG 1 cut(s) 1431
SinI GGWCC 1 cut(s) 202
SmiMI CAYNNNNRTG 2 cut(s) 521, 557
Sse9I AATT 4 cut(s) 693, 1067, 1100, 1707
SseBI AGGCCT 1 cut(s) 701
SspMI CTAG 1 cut(s) 644
SstI GAGCTC 1 cut(s) 51
StuI AGGCCT 1 cut(s) 701
StyD4I CCNGG 3 cut(s) 198, 939, 1077
StyI CCWWGG 3 cut(s) 962, 1034, 1119
TaaI ACNGT 1 cut(s) 1695
TaiI ACGT 2 cut(s) 12, 447
TaqI TCGA 5 cut(s) 420, 533, 789, 1330, 1565
TasI AATT 4 cut(s) 693, 1067, 1100, 1707
TatI WGTACW 2 cut(s) 411, 924
TfiI GAWTC 6 cut(s) 506, 1439, 1469, 1499, 1532, 1562
Tru1I TTAA 2 cut(s) 255, 696
Tru9I TTAA 2 cut(s) 255, 696
TscAI CASTG 1 cut(s) 843
TspDTI ATGAA 3 cut(s) 643, 944, 1667
TspGWI ACGGA 4 cut(s) 53, 164, 899, 1043
TspRI CASTG 1 cut(s) 843
VpaK11BI GGWCC 1 cut(s) 202
VspI ATTAAT 1 cut(s) 255
XagI CCTNNNNNAGG 1 cut(s) 1725
XceI RCATGY 2 cut(s) 997, 1272
XmiI GTMKAC 1 cut(s) 1330
XspI CTAG 1 cut(s) 644
Zsp2I ATGCAT 1 cut(s) 1270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.