pycom11g06170
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000371
Physical Location & Seq
Forward (+)
4743470 .. 4746274
2805 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g06170.14

Sequence Viewer

Length: 2193 bp
ATGCTTATATATAAGATAGATTGTAATTTCTTTCGTAGTTTATATAATATAAGATGTTTCTTTGATTTCTTTTTATTGACACACAAAGTCATTGGCATTACACTGAAAGAATCCATGGCGGTAAATATTCCGTCGGAGCCAATAAAGGATCGCTCACTCAAATCCAAAGGACAAATGAGAGATTATGAAGAGAAAAATGAAATCATAACATCCCCTACAGAATTCAAAGACATCCCAGTAACAGGACCACCACGTCTCTTGAGACAATCCATGTTGTTGCACCATGGTACATCTGTTCACGCAGAACTCAGACATCCAGGCACATTTGTCGTTTTACCTCCCGTGGGCTTTCTTAAATCAACTCATCCGAATCTGACCACTCATCATGACCTGCATTTTTTTTTTTTTTTAAATTTTTTACGCGTGAAACACCACATTTTACACTTGTATTTCCATGTACTTGCTAAAGAATCACTGCTAGTGACCGGCATAACCTACTCTACTATCTACAGATATCTTCCCAGCACTGTGAGAGCGAGGGCCGCCGTGCAGCCGCTAATAAGAAAAAGTAGAAAATCACGACTCCTATTTTTTTCAGTAAAACACAATCATCCACCGTGGGATGGGATTAGATCCAACGGGTCAGGATTGCCCAGAACACATAAGAACTCCAATGATTTTATCCAACCCGGTTTCCAACTTCCAGTGGCGGCACAGCGGCGGTGCTCCGCGCACAACTCGGGACAAAATGTGTATACTTTTCCTTACCACGTTTGCCCACCCAACGGCTACTTACGTCAAACTCGCCCAGCCGTAGATGAGATTAGATCGATCGACAGAGACTTGGGAAGAAAAACTCATACGATTTCGCACCAAAAGAGAGTGTCTGAAACAACAGAGAGAAACCCTAACGAGGTCTCAACAATGGAGGAGGAGGGTTATGGTGGTATTGTGCCGCTGGGTTTTTATGAAAATCAGCTGCTGGGTTCTAACGGAATGCCGCTGGGGTTTCGGTTTCACCCGACCGATCAGGAATTGATCAGTTTCTTCCTTTACAACAGACTCCTCCACAGAGAGTACTGCGAGAATTTAATCTACGAGTTCGACCTCTTCGGCAAGACTCCACCGTGGGTGGTTTGGGAGAATTTCGGCGGGCCGGGACTTGAAGATCAAGATTCGTACTTCTTCTGCCAACTCAAGCCTAGAAGCAAGGCGCGCATCAAACGTGAAATTGACGCCGGAGGTACGTGGAGCGAATCCAATTCAAAGCCGGTAAAGGATATGCAGAATGAAAAAGCTATTGGGAAAAAGAGGAAATTGCGGTATGAGAAGGAAGGATGCGAGCATGATGGTGACTGGCTCTTGGAAGAGTACAGTATTCTTCCCAGTGTAGTTGGCTGCGCTGATGATTCCGATCACGAAATTGGGAAGGTGGTTCTCTGCCGACTTAAAAAGAATTCTAGGAACGAAAACAAGAAGAATAATTCGAATTCAACCCAACAAGTGAACGAGCAGCCGGCAAAAAAGAGAGCAAGAAAAGAAGTCAAGGAGAAGCCGGCGAAAACAAAAAAGAGAGCAAGAAAAGAAGAGAGCGAGAAGCCGGCGAAAACAAAGGCAAGAAACGAAGTGCGATCACCAAATACTACTAGCGTGATCACCCATACCATTGAGGAACTACAAAACTGCCCTAGTACTAGCAGTGCTCCTGTCCTGCCCTTCGATGAAAGCAATTACAAGATGATTAGTGACGCTATTAATCATGATCAGCAGTGCATAAGCAACATTGACGGTAGTACGATGCCTGCAAATTTTTCCGATCAAGATTATGTGCCGATAAGCTTGGTCAGCGAAGGTGATGAGTCGCTTTTGAAGGATGAAGATTTACTTTTTGACAACGGTGAAGATATGTTTTTTGACCTCGACGATTTGTTCGCACCATTAGACTGTGAATCTGCATGGTCGCAAGAGAAGCTGCTTCAGATTGACGAAACTCAAGTGCCTTTGCCGTTGGATGGGATGAATTGTTGGGACGACTGTTTGTGGATGGGCAATTGTCTGTCTAATTTCGACGGCGAGAGATTATGTAATTGTGATCACTACGGTTGTTTTATTTCGACTGCTGGGGATTGTAATTTCTTTTGTAGTTTATATAATATAAGATGTTTCTTTGATTTCTTCTTGTTATTGAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

731

Amino Acids

83.87

Weight (kDa)

6.72

Isoelectric Point (pI)

45.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000371)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g30540 FvH4_5g31040 FvH4_5g34901 FvH4_5g34902 FvH4_5g35290 FvH4_6g26310 FvH4_6g26330 FvH4_6g51360
malus_domestica MD03G1130400.v1.1 MD05G1005400.v1.1 MD05G1030600.v1.1 MD11G1074200.v1.1 MD11G1075500.v1.1 MD11G1075600.v1.1 MD11G1138500.v1.1 MD13G1124900.v1.1 MD15G1393000.v1.1
prunus_persica Prupe.1G063700_v2.0.a1 Prupe.1G106100_v2.0.a1 Prupe.2G196800_v2.0.a1 Prupe.2G202600_v2.0.a1 Prupe.6G057300_v2.0.a1 Prupe.6G092100_v2.0.a1 Prupe.6G098300_v2.0.a1 Prupe.6G098400_v2.0.a1 Prupe.6G112000_v2.0.a1 Prupe.8G095200_v2.0.a1 Prupe.8G097100_v2.0.a1
pyrus_communis pycom03g04400 pycom03g04810 pycom04g03340 pycom11g06160 pycom11g06170 pycom11g06280 pycom12g00070
rosa_chinensis RchiOBHm_Chr2g0126751 RchiOBHm_Chr5g0047081 RchiOBHm_Chr7g0230611 RchiOBHm_Chr7g0236441 RchiOBHm_Chr7g0236481 RchiOBHm_Chr7g0236511
rosa_laevigata RLG00000001105 RLG00000001256 RLG00000018919 RLG00000018920 RLG00000022153
rosa_multiflora Rmu_co8144300.1_g000001 Rmu_sc0000007.1_g000005 Rmu_sc0000007.1_g000006 Rmu_sc0000070.1_g000054 Rmu_sc0000588.1_g000007 Rmu_sc0002222.1_g000014 Rmu_sc0002449.1_g000028 Rmu_sc0003747.1_g000001 Rmu_sc0005733.1_g000007 Rmu_sc0007784.1_g000006 Rmu_sc0011173.1_g000003 Rmu_sc0011236.1_g000004 Rmu_sc0014124.1_g000001
rosa_roxburghii Rroxscaffold_2G00116990 Rroxscaffold_4G00294750 Rroxscaffold_4G00294760 Rroxscaffold_4G00294800
rosa_rugosa Rorug02G0264600 Rorug02G0264600 Rorug02G0564800 Rorug02G0564900
rosa_samantha Rh1AG295700 Rh1AG301300 Rh1BG128600 Rh1BG128700 Rh1BG128800 Rh1CG282300 Rh1DG164800 Rh1DG164900 Rh2AG321700 Rh2AG321800 Rh2AG644400 Rh2AG644500 Rh2BG655200 Rh2BG655300 Rh2CG309500 Rh2CG309600 Rh2CG620500 Rh2DG668700 Rh3BG170600 Rh7AG434800 Rh7BG127300 Rh7BG423300 Rh7BG423700 Rh7BG424100 Rh7BG424200 Rh7CG383900 Rh7CG432200 Rh7CG453500 Rh7DG368300 Rh7DG409100 Rh7DG438400
rosa_wichuraiana Rw0G020640 Rw2G026070 Rw2G026080 Rw5G020070 Rw7G037290 Rw7G037330 Rw7G037540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 399
AccI GTMKAC 1 cut(s) 755
AccII CGCG 3 cut(s) 423, 731, 1216
AclWI GGATC 2 cut(s) 156, 627
AcsI RAATTY 7 cut(s) 221, 412, 1087, 1144, 1456, 1489, 1807
AcuI CTGAAG 1 cut(s) 1961
AcyI GRCGYC 1 cut(s) 1236
AfaI GTAC 8 cut(s) 289, 459, 1079, 1181, 1246, 1373, 1693, 1795
AfiI CCNNNNNNNGG 6 cut(s) 242, 344, 623, 785, 913, 2012
AflIII ACRYGT 1 cut(s) 421
AgsI TTSAA 5 cut(s) 226, 1166, 1266, 1494, 1870
AjiI CACGTC 1 cut(s) 254
AjnI CCWGG 1 cut(s) 316
AjuI GAANNNNNNNTTGG 2 cut(s) 1284, 1316
AluBI AGCT 4 cut(s) 979, 1298, 1839, 1972
AluI AGCT 4 cut(s) 979, 1298, 1839, 1972
Alw21I GWGCWC 2 cut(s) 728, 1705
Alw26I GTCTC 4 cut(s) 256, 260, 834, 922
AlwI GGATC 2 cut(s) 156, 627
AlwNI CAGNNNCTG 1 cut(s) 982
Ama87I CYCGRG 1 cut(s) 739
AoxI GGCC 2 cut(s) 540, 1154
ApeKI GCWGC 5 cut(s) 550, 979, 1398, 1513, 1972
ApoI RAATTY 7 cut(s) 221, 412, 1087, 1144, 1456, 1489, 1807
ArsI GACNNNNNNTTYG 2 cut(s) 1913, 1945
AseI ATTAAT 1 cut(s) 1755
AspLEI GCGC 4 cut(s) 733, 1216, 1218, 1403
AspS9I GGNCC 3 cut(s) 245, 540, 1154
AsuC2I CCSGG 2 cut(s) 690, 1158
AsuHPI GGTGA 6 cut(s) 1010, 1364, 1626, 1648, 1865, 1910
AsuII TTCGAA 1 cut(s) 1487
AvaI CYCGRG 1 cut(s) 739
AvaII GGWCC 1 cut(s) 245
BaeI ACNNNNGTAYC 2 cut(s) 279, 312
Bbv12I GWGCWC 2 cut(s) 728, 1705
BbvI GCAGC 5 cut(s) 562, 966, 1385, 1525, 1959
BccI CCATC 4 cut(s) 617, 1343, 2006, 2038
BceAI ACGGC 5 cut(s) 530, 797, 802, 1990, 2086
BcgI CGANNNNNNTGC 2 cut(s) 310, 344
BciT130I CCWGG 1 cut(s) 318
BclI TGATCA 4 cut(s) 1038, 1653, 1762, 2092
BcnI CCSGG 2 cut(s) 690, 1158
BcoDI GTCTC 4 cut(s) 256, 260, 834, 922
BfaI CTAG 6 cut(s) 479, 1203, 1461, 1647, 1689, 1695
BfmI CTRYAG 2 cut(s) 216, 508
BfuAI ACCTGC 1 cut(s) 399
BmcAI AGTACT 2 cut(s) 1079, 1693
Bme1390I CCNGG 3 cut(s) 318, 690, 1158
Bme18I GGWCC 1 cut(s) 245
BmeT110I CYCGRG 1 cut(s) 739
BmgBI CACGTC 1 cut(s) 254
BmgT120I GGNCC 3 cut(s) 245, 540, 1154
BmiI GGNNCC 1 cut(s) 138
BmrFI CCNGG 3 cut(s) 318, 690, 1158
BmrI ACTGGG 2 cut(s) 230, 1380
BmsI GCATC 3 cut(s) 1227, 1328, 1788
BmuI ACTGGG 2 cut(s) 230, 1380
Bpu14I TTCGAA 1 cut(s) 1487
BpuEI CTTGAG 3 cut(s) 280, 1181, 1977
BpuMI CCSGG 2 cut(s) 690, 1158
Bsa29I ATCGAT 1 cut(s) 830
BsaAI YACGTR 1 cut(s) 1248
BsaBI GATNNNNATC 1 cut(s) 1413
BsaHI GRCGYC 1 cut(s) 1236
BsaI GGTCTC 1 cut(s) 922
BsaJI CCNNGG 5 cut(s) 114, 283, 342, 617, 1127
Bsc4I CCNNNNNNNGG 6 cut(s) 242, 344, 623, 785, 913, 2012
Bse118I RCCGGY 5 cut(s) 485, 1270, 1516, 1555, 1600
Bse1I ACTGG 4 cut(s) 236, 704, 1361, 1386
Bse8I GATNNNNATC 1 cut(s) 1413
BseBI CCWGG 1 cut(s) 318
BseCI ATCGAT 1 cut(s) 830
BseDI CCNNGG 5 cut(s) 114, 283, 342, 617, 1127
BseJI GATNNNNATC 1 cut(s) 1413
BseLI CCNNNNNNNGG 6 cut(s) 242, 344, 623, 785, 913, 2012
BseMII CTCAG 1 cut(s) 322
BseNI ACTGG 4 cut(s) 236, 704, 1361, 1386
BsePI GCGCGC 1 cut(s) 1214
BseRI GAGGAG 3 cut(s) 944, 947, 1055
BseXI GCAGC 5 cut(s) 562, 966, 1385, 1525, 1959
BseYI CCCAGC 6 cut(s) 521, 808, 958, 982, 1003, 2120
BsgI GTGCAG 1 cut(s) 569
Bsh1236I CGCG 3 cut(s) 423, 731, 1216
Bsh1285I CGRYCG 2 cut(s) 834, 1026
BshFI GGCC 2 cut(s) 542, 1156
BshVI ATCGAT 1 cut(s) 830
BsiEI CGRYCG 2 cut(s) 834, 1026
BsiHKAI GWGCWC 2 cut(s) 728, 1705
BsiHKCI CYCGRG 1 cut(s) 739
BsiSI CCGG 8 cut(s) 486, 690, 1157, 1239, 1271, 1517, 1556, 1601
BslFI GGGAC 3 cut(s) 756, 1173, 2042
BslI CCNNNNNNNGG 6 cut(s) 242, 344, 623, 785, 913, 2012
BsmAI GTCTC 4 cut(s) 256, 260, 834, 922
BsmBI CGTCTC 1 cut(s) 260
BsmFI GGGAC 3 cut(s) 756, 1173, 2042
BsmI GAATGC 1 cut(s) 1002
BsnI GGCC 2 cut(s) 542, 1156
Bso31I GGTCTC 1 cut(s) 922
BsoBI CYCGRG 1 cut(s) 739
Bsp119I TTCGAA 1 cut(s) 1487
Bsp1286I GDGCHC 2 cut(s) 728, 1705
Bsp19I CCATGG 2 cut(s) 114, 283
BspANI GGCC 2 cut(s) 542, 1156
BspCNI CTCAG 1 cut(s) 321
BspDI ATCGAT 1 cut(s) 830
BspFNI CGCG 3 cut(s) 423, 731, 1216
BspHI TCATGA 2 cut(s) 385, 1759
BspLI GGNNCC 1 cut(s) 138
BspMI ACCTGC 1 cut(s) 399
BspPI GGATC 2 cut(s) 156, 627
BspT104I TTCGAA 1 cut(s) 1487
BspTNI GGTCTC 1 cut(s) 922
BsrFI RCCGGY 5 cut(s) 485, 1270, 1516, 1555, 1600
BsrI ACTGG 4 cut(s) 236, 704, 1361, 1386
BssAI RCCGGY 5 cut(s) 485, 1270, 1516, 1555, 1600
BssECI CCNNGG 5 cut(s) 114, 283, 342, 617, 1127
BssHII GCGCGC 1 cut(s) 1214
BssNAI GTATAC 1 cut(s) 756
BssNI GRCGYC 1 cut(s) 1236
BssT1I CCWWGG 2 cut(s) 114, 283
Bst1107I GTATAC 1 cut(s) 756
Bst2UI CCWGG 1 cut(s) 318
Bst4CI ACNGT 9 cut(s) 529, 618, 1128, 1376, 1790, 1898, 1946, 2036, 2102
Bst6I CTCTTC 4 cut(s) 183, 1115, 1362, 1581
BstACI GRCGYC 1 cut(s) 1236
BstBAI YACGTR 1 cut(s) 1248
BstBI TTCGAA 1 cut(s) 1487
BstC8I GCNNGC 7 cut(s) 1154, 1216, 1343, 1518, 1557, 1602, 1803
BstDEI CTNAG 1 cut(s) 308
BstDSI CCRYGG 5 cut(s) 114, 283, 342, 617, 1127
BstFNI CGCG 3 cut(s) 423, 731, 1216
BstHHI GCGC 4 cut(s) 733, 1216, 1218, 1403
BstMAI GTCTC 4 cut(s) 256, 260, 834, 922
BstMCI CGRYCG 2 cut(s) 834, 1026
BstMWI GCNNNNNNNGC 4 cut(s) 542, 1215, 1845, 1969
BstNI CCWGG 1 cut(s) 318
BstSCI CCNGG 3 cut(s) 316, 688, 1156
BstSFI CTRYAG 2 cut(s) 216, 508
BstUI CGCG 3 cut(s) 423, 731, 1216
BstV1I GCAGC 5 cut(s) 562, 966, 1385, 1525, 1959
BstX2I RGATCY 1 cut(s) 632
BstYI RGATCY 1 cut(s) 632
BstZ17I GTATAC 1 cut(s) 756
Bsu15I ATCGAT 1 cut(s) 830
BsuRI GGCC 2 cut(s) 542, 1156
BsuTUI ATCGAT 1 cut(s) 830
BtgI CCRYGG 5 cut(s) 114, 283, 342, 617, 1127
BtrI CACGTC 1 cut(s) 254
BtsI GCAGTG 3 cut(s) 473, 1705, 1775
BtsIMutI CAGTG 7 cut(s) 101, 473, 525, 711, 1393, 1705, 1775
BveI ACCTGC 1 cut(s) 399
Cac8I GCNNGC 7 cut(s) 1154, 1216, 1343, 1518, 1557, 1602, 1803
CaiI CAGNNNCTG 1 cut(s) 982
CciI TCATGA 2 cut(s) 385, 1759
CfoI GCGC 4 cut(s) 733, 1216, 1218, 1403
Cfr10I RCCGGY 5 cut(s) 485, 1270, 1516, 1555, 1600
Cfr13I GGNCC 3 cut(s) 245, 540, 1154
ClaI ATCGAT 1 cut(s) 830
CseI GACGC 2 cut(s) 1244, 1757
Csp6I GTAC 8 cut(s) 288, 458, 1078, 1180, 1245, 1372, 1692, 1794
CspCI CAANNNNNGTGG 2 cut(s) 240, 275
CviAII CATG 8 cut(s) 115, 271, 284, 386, 455, 1346, 1760, 1956
CviQI GTAC 8 cut(s) 288, 458, 1078, 1180, 1245, 1372, 1692, 1794
DdeI CTNAG 1 cut(s) 308
DraI TTTAAA 1 cut(s) 411
DrdI GACNNNNNNGTC 1 cut(s) 252
DseDI GACNNNNNNGTC 1 cut(s) 252
Eam1104I CTCTTC 4 cut(s) 183, 1115, 1362, 1581
EarI CTCTTC 4 cut(s) 183, 1115, 1362, 1581
Eco130I CCWWGG 2 cut(s) 114, 283
Eco31I GGTCTC 1 cut(s) 922
Eco32I GATATC 1 cut(s) 515
Eco47I GGWCC 1 cut(s) 245
Eco57I CTGAAG 1 cut(s) 1961
Eco88I CYCGRG 1 cut(s) 739
EcoRI GAATTC 3 cut(s) 221, 1456, 1489
EcoRII CCWGG 1 cut(s) 316
EcoRV GATATC 1 cut(s) 515
EcoT14I CCWWGG 2 cut(s) 114, 283
ErhI CCWWGG 2 cut(s) 114, 283
Esp3I CGTCTC 1 cut(s) 260
FaeI CATG 8 cut(s) 118, 274, 287, 389, 458, 1349, 1763, 1959
FalI AAGNNNNNCTT 2 cut(s) 1869, 1901
FaqI GGGAC 3 cut(s) 756, 1173, 2042
FatI CATG 8 cut(s) 114, 270, 283, 385, 454, 1345, 1759, 1955
FauI CCCGC 1 cut(s) 1145
FbaI TGATCA 4 cut(s) 1038, 1653, 1762, 2092
FblI GTMKAC 1 cut(s) 755
FspBI CTAG 6 cut(s) 479, 1203, 1461, 1647, 1689, 1695
GlaI GCGC 4 cut(s) 732, 1215, 1217, 1402
GsaI CCCAGC 6 cut(s) 525, 812, 962, 986, 1007, 2124
HaeIII GGCC 2 cut(s) 542, 1156
HapII CCGG 8 cut(s) 486, 690, 1157, 1239, 1271, 1517, 1556, 1601
HgaI GACGC 2 cut(s) 1244, 1757
HhaI GCGC 4 cut(s) 733, 1216, 1218, 1403
Hin1I GRCGYC 1 cut(s) 1236
Hin1II CATG 8 cut(s) 118, 274, 287, 389, 458, 1349, 1763, 1959
Hin6I GCGC 4 cut(s) 731, 1214, 1216, 1401
HinP1I GCGC 4 cut(s) 731, 1214, 1216, 1401
HindIII AAGCTT 1 cut(s) 1837
HpaII CCGG 8 cut(s) 486, 690, 1157, 1239, 1271, 1517, 1556, 1601
HphI GGTGA 6 cut(s) 1010, 1364, 1626, 1648, 1865, 1910
Hpy166II GTNNAC 3 cut(s) 298, 756, 1507
Hpy188I TCNGA 8 cut(s) 136, 311, 369, 375, 889, 1414, 1816, 1980
Hpy8I GTNNAC 3 cut(s) 298, 756, 1507
Hpy99I CGWCG 3 cut(s) 136, 1925, 2072
HpyAV CCTTC 6 cut(s) 1324, 1328, 1423, 1726, 1844, 1864
HpyCH4III ACNGT 9 cut(s) 529, 618, 1128, 1376, 1790, 1898, 1946, 2036, 2102
HpyCH4IV ACGT 5 cut(s) 253, 771, 796, 1225, 1247
HpyCH4V TGCA 7 cut(s) 280, 394, 550, 1285, 1773, 1805, 1955
HpyF10VI GCNNNNNNNGC 4 cut(s) 542, 1215, 1845, 1969
HpyF3I CTNAG 1 cut(s) 308
HpySE526I ACGT 5 cut(s) 253, 771, 796, 1225, 1247
Hsp92I GRCGYC 1 cut(s) 1236
Hsp92II CATG 8 cut(s) 118, 274, 287, 389, 458, 1349, 1763, 1959
HspAI GCGC 4 cut(s) 731, 1214, 1216, 1401
KroI GCCGGC 3 cut(s) 1516, 1555, 1600
KroNI GCCGGC 3 cut(s) 1518, 1557, 1602
Ksp22I TGATCA 4 cut(s) 1038, 1653, 1762, 2092
LmnI GCTCC 4 cut(s) 136, 731, 1251, 1708
Lsp1109I GCAGC 5 cut(s) 562, 966, 1385, 1525, 1959
LweI GCATC 3 cut(s) 1227, 1328, 1788
MaeI CTAG 6 cut(s) 479, 1203, 1461, 1647, 1689, 1695
MaeII ACGT 5 cut(s) 253, 771, 796, 1225, 1247
MaeIII GTNAC 4 cut(s) 238, 481, 1352, 1745
MfeI CAATTG 1 cut(s) 2050
MflI RGATCY 1 cut(s) 632
MhlI GDGCHC 2 cut(s) 728, 1705
MluI ACGCGT 1 cut(s) 421
MlyI GAGTC 4 cut(s) 576, 1056, 1114, 1868
MmeI TCCRAC 5 cut(s) 114, 660, 709, 721, 1989
MroNI GCCGGC 3 cut(s) 1516, 1555, 1600
MseI TTAA 6 cut(s) 354, 410, 1091, 1449, 1755, 2191
MslI CAYNNNNRTG 1 cut(s) 1350
MspA1I CMGCKG 4 cut(s) 718, 958, 979, 1003
MspI CCGG 8 cut(s) 486, 690, 1157, 1239, 1271, 1517, 1556, 1601
MspR9I CCNGG 3 cut(s) 318, 690, 1158
MunI CAATTG 1 cut(s) 2050
Mva1269I GAATGC 1 cut(s) 1002
MvaI CCWGG 1 cut(s) 318
MvnI CGCG 3 cut(s) 423, 731, 1216
MwoI GCNNNNNNNGC 4 cut(s) 542, 1215, 1845, 1969
NaeI GCCGGC 3 cut(s) 1518, 1557, 1602
NciI CCSGG 2 cut(s) 690, 1158
NcoI CCATGG 2 cut(s) 114, 283
NgoMIV GCCGGC 3 cut(s) 1516, 1555, 1600
NlaIII CATG 8 cut(s) 118, 274, 287, 389, 458, 1349, 1763, 1959
NlaIV GGNNCC 1 cut(s) 138
NmuCI GTSAC 3 cut(s) 481, 1352, 1745
NspV TTCGAA 1 cut(s) 1487
PagI TCATGA 2 cut(s) 385, 1759
PauI GCGCGC 1 cut(s) 1214
PctI GAATGC 1 cut(s) 1002
PdiI GCCGGC 3 cut(s) 1518, 1557, 1602
PfeI GAWTC 7 cut(s) 110, 370, 470, 1175, 1256, 1409, 1949
Ple19I CGATCG 1 cut(s) 834
PleI GAGTC 4 cut(s) 576, 1056, 1114, 1867
PpsI GAGTC 4 cut(s) 576, 1056, 1114, 1867
Ppu21I YACGTR 1 cut(s) 1248
PshBI ATTAAT 1 cut(s) 1755
Psp6I CCWGG 1 cut(s) 316
PspFI CCCAGC 6 cut(s) 521, 808, 958, 982, 1003, 2120
PspGI CCWGG 1 cut(s) 316
PspN4I GGNNCC 1 cut(s) 138
PspPI GGNCC 3 cut(s) 245, 540, 1154
PstNI CAGNNNCTG 1 cut(s) 982
PsuI RGATCY 1 cut(s) 632
PteI GCGCGC 1 cut(s) 1214
PvuI CGATCG 1 cut(s) 834
PvuII CAGCTG 1 cut(s) 979
RsaI GTAC 8 cut(s) 289, 459, 1079, 1181, 1246, 1373, 1693, 1795
RsaNI GTAC 8 cut(s) 288, 458, 1078, 1180, 1245, 1372, 1692, 1794
RseI CAYNNNNRTG 1 cut(s) 1350
SaqAI TTAA 6 cut(s) 354, 410, 1091, 1449, 1755, 2191
Sau96I GGNCC 3 cut(s) 245, 540, 1154
ScaI AGTACT 2 cut(s) 1079, 1693
SchI GAGTC 4 cut(s) 576, 1056, 1114, 1868
ScrFI CCNGG 3 cut(s) 318, 690, 1158
SduI GDGCHC 2 cut(s) 728, 1705
SfaNI GCATC 3 cut(s) 1227, 1328, 1788
SfcI CTRYAG 2 cut(s) 216, 508
SfuI TTCGAA 1 cut(s) 1487
SinI GGWCC 1 cut(s) 245
SmiMI CAYNNNNRTG 1 cut(s) 1350
SmlI CTYRAG 3 cut(s) 259, 1196, 1992
SmoI CTYRAG 3 cut(s) 259, 1196, 1992
SspI AATATT 1 cut(s) 127
SspMI CTAG 6 cut(s) 479, 1203, 1461, 1647, 1689, 1695
StyD4I CCNGG 3 cut(s) 316, 688, 1156
StyI CCWWGG 2 cut(s) 114, 283
TaaI ACNGT 9 cut(s) 529, 618, 1128, 1376, 1790, 1898, 1946, 2036, 2102
TaiI ACGT 5 cut(s) 256, 774, 799, 1228, 1250
TaqI TCGA 8 cut(s) 830, 834, 1104, 1487, 1719, 1920, 2067, 2114
TaqII GACCGA 1 cut(s) 1040
TatI WGTACW 4 cut(s) 457, 1077, 1371, 1691
TauI GCSGC 6 cut(s) 545, 556, 713, 721, 958, 1003
TfiI GAWTC 7 cut(s) 110, 370, 470, 1175, 1256, 1409, 1949
Tru1I TTAA 6 cut(s) 354, 410, 1091, 1449, 1755, 2191
Tru9I TTAA 6 cut(s) 354, 410, 1091, 1449, 1755, 2191
TscAI CASTG 7 cut(s) 108, 480, 532, 711, 1393, 1705, 1775
TseFI GTSAC 3 cut(s) 481, 1352, 1745
TseI GCWGC 5 cut(s) 550, 979, 1398, 1513, 1972
Tsp45I GTSAC 3 cut(s) 481, 1352, 1745
TspDTI ATGAA 7 cut(s) 201, 213, 984, 1305, 1737, 1890, 2033
TspGWI ACGGA 2 cut(s) 120, 1008
TspRI CASTG 7 cut(s) 108, 480, 532, 711, 1393, 1705, 1775
VpaK11BI GGWCC 1 cut(s) 245
VspI ATTAAT 1 cut(s) 1755
XapI RAATTY 7 cut(s) 221, 412, 1087, 1144, 1456, 1489, 1807
XmiI GTMKAC 1 cut(s) 755
XspI CTAG 6 cut(s) 479, 1203, 1461, 1647, 1689, 1695
ZrmI AGTACT 2 cut(s) 1079, 1693
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.