RchiOBHm_Chr2g0126751
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000371
Physical Location & Seq
Reverse (-)
41316172 .. 41318354
2183 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ49871

Sequence Viewer

Length: 1788 bp
ATGGCCTACGTTCCGGTAGGTTTCCGGTTCCACCCGACCGACGACGAGCTCATCCGGCACTACCTGTATTTGAAGAACAAGGTCAGCAAGGGAGAAGATGAGGCGGCCGCGGCCGCGGCGGTGGTGCCGGAGTTTGATTTGTATGGCGAGACGGAGCCCTGGAACATTTGGGAAGCCCACGGCGGAGCGGATCTGTACGACCAGGATTTGTTCTTCTTCACGAAGCTGAAGAAGGTGAATCCCCACGGCACGCGAATCAATCGGAAGATTGGGACGGGGACTTGGAGCGAAGGCGAACCGTCCAGGCCCATTTTCGTCGGCGAGAAGAACAAGAAGAACAAAACCCCAATCGGCCGGAAGAGGAAGTTCCGGTACGAGAACAAGCTCTCCGACCAGCACGGCTGCTGGTACATGGAGGAGTACAGTCTCGACGGCATCAAATCCGCCGATTACGTCATTTGCCGGCTGCGGGAGAACAACAGATCTGGAGGCGGGACCGGAGGGAATAGGGATTTGCTGGCCATATCGGTGGCGGCGTCCATGGAAGCTTCTGGACCGATTCCGGTGGGGTTCAGGTTCCACCCTACGGATCAGGAGCTGATCTGTTACTTTCTCTACAACAAGAACAAGGGCAAGGGCGGCAGAGGCCTGTCGTTCATCGCCGAGGAGGTGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAAATTAAGGCCCTCCCGGCGCCGGAGGAGCCTCCATTGGAGACAGCGGCGGCGGAGGCGGAGGCGGAGGAGAGCAAAGACAACGGCAAAGAAGAGGAAGGCCACGCGCCGCCTGCGGAGGCGGAGGAAGAGAAGAGGAAGAACGGCGGCGGAGGCGATGCGGGGGCGGAGGGAGAGAAGGAGAAGACCGGCCAAGTGTTGGCGCTGGTGTCAGTGGAGGAGGAAGAGGAGAAGAAAAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGGAAGGAGAGGGGCAAGCGGCTCCTCTGCTATTACTGGAGTACATGAAGAACAAGGACGAAGACGAGAAAGGGCTGAAGCTGGTGGCAAGGGAGGAGGAGGCGGAGGTGGTGGAGGCGGTGGAGGTATGTAAGAAAGAGAATCAATTTTTGCACGAGTTTGATTTGTTTGGAAGCACAGAGCCTTGGGAGATATGGGAAATGTTTAGGGGAGCTGAATTGTGCAACCAGGACTTGTTCTTCTTTACACAATTGAAGAAGGTGAACCCCAAGGGCTCACGCATTGGCCGCAAGGTTGGGTCCGGCGGTACTTGGAGCGAAGGAGATGTCTCCAAGCCCATTGTTGATGACAGAACTGGAAACCAAATTGGCCGGAAGAGGAAGTTGCGGTATGAGAAAGTTGGCTCTCCACACCATGCTTGTTGGTATTTGGATGAGTATAGTCTGCTTGATGCTGATATTGGAGATTATGTCATTTGTCGTCTCCGGAAGAATGACAAGTTAGCAGCAGCAGCATTCTCATCTGGTGAACCAATCCACAGCAGGAAGAGGAAGTCCACTCCTTCCACGACTGCAGCAGAATCAAAACATCCTCCCGCTACTCCACAAGAATCAAAACATCCTTCCACCACTGCGGGAGAATCAAAACCGGAGGAGGACTCATCAAAGGCAAAGCGCAAGCGCACTACCGGGCTCACACAAGTAGAGGAAGCTGCAGCAGATGTGTTGATGAATATGGCCAACAGCACCCTCAACAACAGCACATTGAAACTATTTGGTATTGAAATTGGTTCTACTCCTACTATAGGAGGAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

595

Amino Acids

66.08

Weight (kDa)

5.43

Isoelectric Point (pI)

42.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 5 - 143 3.3e-25 No apical meristem (NAM) protein
NAM PF02365 368 - 472 5.3e-13 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000371)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g30540 FvH4_5g31040 FvH4_5g34901 FvH4_5g34902 FvH4_5g35290 FvH4_6g26310 FvH4_6g26330 FvH4_6g51360
malus_domestica MD03G1130400.v1.1 MD05G1005400.v1.1 MD05G1030600.v1.1 MD11G1074200.v1.1 MD11G1075500.v1.1 MD11G1075600.v1.1 MD11G1138500.v1.1 MD13G1124900.v1.1 MD15G1393000.v1.1
prunus_persica Prupe.1G063700_v2.0.a1 Prupe.1G106100_v2.0.a1 Prupe.2G196800_v2.0.a1 Prupe.2G202600_v2.0.a1 Prupe.6G057300_v2.0.a1 Prupe.6G092100_v2.0.a1 Prupe.6G098300_v2.0.a1 Prupe.6G098400_v2.0.a1 Prupe.6G112000_v2.0.a1 Prupe.8G095200_v2.0.a1 Prupe.8G097100_v2.0.a1
pyrus_communis pycom03g04400 pycom03g04810 pycom04g03340 pycom11g06160 pycom11g06170 pycom11g06280 pycom12g00070
rosa_chinensis RchiOBHm_Chr2g0126751 RchiOBHm_Chr5g0047081 RchiOBHm_Chr7g0230611 RchiOBHm_Chr7g0236441 RchiOBHm_Chr7g0236481 RchiOBHm_Chr7g0236511
rosa_laevigata RLG00000001105 RLG00000001256 RLG00000018919 RLG00000018920 RLG00000022153
rosa_multiflora Rmu_co8144300.1_g000001 Rmu_sc0000007.1_g000005 Rmu_sc0000007.1_g000006 Rmu_sc0000070.1_g000054 Rmu_sc0000588.1_g000007 Rmu_sc0002222.1_g000014 Rmu_sc0002449.1_g000028 Rmu_sc0003747.1_g000001 Rmu_sc0005733.1_g000007 Rmu_sc0007784.1_g000006 Rmu_sc0011173.1_g000003 Rmu_sc0011236.1_g000004 Rmu_sc0014124.1_g000001
rosa_roxburghii Rroxscaffold_2G00116990 Rroxscaffold_4G00294750 Rroxscaffold_4G00294760 Rroxscaffold_4G00294800
rosa_rugosa Rorug02G0264600 Rorug02G0264600 Rorug02G0564800 Rorug02G0564900
rosa_samantha Rh1AG295700 Rh1AG301300 Rh1BG128600 Rh1BG128700 Rh1BG128800 Rh1CG282300 Rh1DG164800 Rh1DG164900 Rh2AG321700 Rh2AG321800 Rh2AG644400 Rh2AG644500 Rh2BG655200 Rh2BG655300 Rh2CG309500 Rh2CG309600 Rh2CG620500 Rh2DG668700 Rh3BG170600 Rh7AG434800 Rh7BG127300 Rh7BG423300 Rh7BG423700 Rh7BG424100 Rh7BG424200 Rh7CG383900 Rh7CG432200 Rh7CG453500 Rh7DG368300 Rh7DG409100 Rh7DG438400
rosa_wichuraiana Rw0G020640 Rw2G026070 Rw2G026080 Rw5G020070 Rw7G037290 Rw7G037330 Rw7G037540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 124, 718
AccB7I CCANNNNNTGG 1 cut(s) 898
AccBSI CCGCTC 1 cut(s) 188
AccII CGCG 4 cut(s) 110, 116, 253, 806
AccIII TCCGGA 1 cut(s) 1455
AclWI GGATC 2 cut(s) 198, 597
AcoI YGGCCR 8 cut(s) 105, 111, 352, 519, 889, 1255, 1339, 1707
AcuI CTGAAG 2 cut(s) 248, 1067
AcyI GRCGYC 2 cut(s) 536, 719
AfaI GTAC 6 cut(s) 197, 374, 410, 422, 1013, 1279
AfiI CCNNNNNNNGG 5 cut(s) 469, 586, 721, 898, 1775
AgsI TTSAA 4 cut(s) 73, 1225, 1738, 1754
AjnI CCWGG 4 cut(s) 158, 201, 302, 1197
AloI GAACNNNNNNTCC 2 cut(s) 371, 403
AluBI AGCT 8 cut(s) 49, 226, 385, 548, 598, 1051, 1184, 1682
AluI AGCT 8 cut(s) 49, 226, 385, 548, 598, 1051, 1184, 1682
Alw21I GWGCWC 1 cut(s) 51
Alw26I GTCTC 5 cut(s) 143, 431, 734, 1303, 1457
AlwI GGATC 2 cut(s) 198, 597
AlwNI CAGNNNCTG 1 cut(s) 598
Aor13HI TCCGGA 1 cut(s) 1455
ApeKI GCWGC 8 cut(s) 402, 466, 1475, 1478, 1481, 1544, 1682, 1685
ArsI GACNNNNNNTTYG 2 cut(s) 1281, 1313
AspLEI GCGC 5 cut(s) 721, 808, 904, 1647, 1653
AspS9I GGNCC 5 cut(s) 306, 495, 554, 709, 1269
AsuC2I CCSGG 2 cut(s) 716, 1660
AsuHPI GGTGA 3 cut(s) 247, 1243, 1508
AvaII GGWCC 3 cut(s) 495, 554, 1269
BalI TGGCCA 2 cut(s) 521, 1709
BanI GGYRCC 2 cut(s) 124, 718
BanII GRGCYC 4 cut(s) 51, 159, 1247, 1665
BarI GAAGNNNNNNTAC 2 cut(s) 356, 388
BauI CACGAG 1 cut(s) 1124
BbsI GAAGAC 2 cut(s) 890, 1038
Bbv12I GWGCWC 1 cut(s) 51
BbvI GCAGC 8 cut(s) 389, 453, 1487, 1490, 1493, 1556, 1669, 1697
BceAI ACGGC 6 cut(s) 196, 262, 415, 448, 799, 859
BciT130I CCWGG 4 cut(s) 160, 203, 304, 1199
BcnI CCSGG 2 cut(s) 716, 1660
BcoDI GTCTC 5 cut(s) 143, 431, 734, 1303, 1457
BfmI CTRYAG 3 cut(s) 1542, 1683, 1773
BfoI RGCGCY 2 cut(s) 722, 905
BglI GCCNNNNNGGC 1 cut(s) 716
BglII AGATCT 1 cut(s) 482
Bme1390I CCNGG 6 cut(s) 160, 203, 304, 716, 1199, 1660
Bme18I GGWCC 3 cut(s) 495, 554, 1269
BmgT120I GGNCC 5 cut(s) 306, 495, 554, 709, 1269
BmiI GGNNCC 9 cut(s) 29, 126, 156, 496, 578, 720, 729, 993, 1270
BmrFI CCNGG 6 cut(s) 160, 203, 304, 716, 1199, 1660
BmsI GCATC 3 cut(s) 444, 847, 1411
BpiI GAAGAC 2 cut(s) 890, 1038
BplI GAGNNNNNCTC 2 cut(s) 1613, 1645
BpmI CTGGAG 2 cut(s) 507, 1028
BpuMI CCSGG 2 cut(s) 716, 1660
BsaHI GRCGYC 2 cut(s) 536, 719
BsaJI CCNNGG 9 cut(s) 108, 114, 158, 178, 244, 540, 663, 1154, 1239
BsaWI WCCGGW 7 cut(s) 13, 24, 369, 497, 562, 1455, 1618
BsaXI ACNNNNNCTCC 4 cut(s) 371, 401, 1425, 1455
Bsc4I CCNNNNNNNGG 5 cut(s) 469, 586, 721, 898, 1775
Bse118I RCCGGY 2 cut(s) 462, 887
Bse1I ACTGG 2 cut(s) 1011, 1330
BseAI TCCGGA 1 cut(s) 1455
BseBI CCWGG 4 cut(s) 160, 203, 304, 1199
BseDI CCNNGG 9 cut(s) 108, 114, 158, 178, 244, 540, 663, 1154, 1239
BseGI GGATG 4 cut(s) 51, 1408, 1558, 1588
BseLI CCNNNNNNNGG 5 cut(s) 469, 586, 721, 898, 1775
BseNI ACTGG 2 cut(s) 1011, 1330
BseX3I CGGCCG 3 cut(s) 105, 111, 352
BseXI GCAGC 8 cut(s) 389, 453, 1487, 1490, 1493, 1556, 1669, 1697
Bsh1236I CGCG 4 cut(s) 110, 116, 253, 806
Bsh1285I CGRYCG 4 cut(s) 39, 108, 114, 355
BshNI GGYRCC 2 cut(s) 124, 718
BsiEI CGRYCG 4 cut(s) 39, 108, 114, 355
BsiHKAI GWGCWC 1 cut(s) 51
BslFI GGGAC 3 cut(s) 286, 292, 508
BslI CCNNNNNNNGG 5 cut(s) 469, 586, 721, 898, 1775
BsmAI GTCTC 5 cut(s) 143, 431, 734, 1303, 1457
BsmBI CGTCTC 2 cut(s) 143, 1457
BsmFI GGGAC 3 cut(s) 286, 292, 508
BsmI GAATGC 1 cut(s) 1484
Bsp1286I GDGCHC 4 cut(s) 51, 159, 1247, 1665
Bsp13I TCCGGA 1 cut(s) 1455
Bsp143I GATC 4 cut(s) 190, 482, 589, 600
Bsp19I CCATGG 1 cut(s) 540
BspEI TCCGGA 1 cut(s) 1455
BspFNI CGCG 4 cut(s) 110, 116, 253, 806
BspLI GGNNCC 9 cut(s) 29, 126, 156, 496, 578, 720, 729, 993, 1270
BspMAI CTGCAG 2 cut(s) 1546, 1687
BspPI GGATC 2 cut(s) 198, 597
BspT107I GGYRCC 2 cut(s) 124, 718
BsrBI CCGCTC 1 cut(s) 188
BsrFI RCCGGY 2 cut(s) 462, 887
BsrI ACTGG 2 cut(s) 1011, 1330
BssAI RCCGGY 2 cut(s) 462, 887
BssECI CCNNGG 9 cut(s) 108, 114, 158, 178, 244, 540, 663, 1154, 1239
BssMI GATC 4 cut(s) 190, 482, 589, 600
BssNI GRCGYC 2 cut(s) 536, 719
BssSI CACGAG 1 cut(s) 1124
BssT1I CCWWGG 3 cut(s) 540, 1154, 1239
Bst2BI CACGAG 1 cut(s) 1124
Bst2UI CCWGG 4 cut(s) 160, 203, 304, 1199
Bst4CI ACNGT 2 cut(s) 300, 425
Bst6I CTCTTC 7 cut(s) 353, 786, 822, 827, 918, 1340, 1511
BstACI GRCGYC 2 cut(s) 536, 719
BstC8I GCNNGC 6 cut(s) 251, 464, 519, 813, 987, 1649
BstDSI CCRYGG 5 cut(s) 108, 114, 178, 244, 540
BstENI CCTNNNNNAGG 1 cut(s) 1773
BstF5I GGATG 4 cut(s) 51, 1408, 1558, 1588
BstFNI CGCG 4 cut(s) 110, 116, 253, 806
BstH2I RGCGCY 2 cut(s) 722, 905
BstHHI GCGC 5 cut(s) 721, 808, 904, 1647, 1653
BstKTI GATC 4 cut(s) 193, 485, 592, 603
BstMAI GTCTC 5 cut(s) 143, 431, 734, 1303, 1457
BstMBI GATC 4 cut(s) 190, 482, 589, 600
BstMCI CGRYCG 4 cut(s) 39, 108, 114, 355
BstNI CCWGG 4 cut(s) 160, 203, 304, 1199
BstSCI CCNGG 6 cut(s) 158, 201, 302, 714, 1197, 1658
BstSFI CTRYAG 3 cut(s) 1542, 1683, 1773
BstUI CGCG 4 cut(s) 110, 116, 253, 806
BstV1I GCAGC 8 cut(s) 389, 453, 1487, 1490, 1493, 1556, 1669, 1697
BstV2I GAAGAC 2 cut(s) 890, 1038
BstX2I RGATCY 2 cut(s) 190, 482
BstXI CCANNNNNNTGG 1 cut(s) 529
BstYI RGATCY 2 cut(s) 190, 482
BstZI CGGCCG 3 cut(s) 105, 111, 352
BtgI CCRYGG 5 cut(s) 108, 114, 178, 244, 540
BtgZI GCGATG 2 cut(s) 643, 870
BtsCI GGATG 4 cut(s) 51, 1408, 1558, 1588
BtsI GCAGTG 1 cut(s) 1599
BtsIMutI CAGTG 2 cut(s) 918, 1599
Cac8I GCNNGC 6 cut(s) 251, 464, 519, 813, 987, 1649
CaiI CAGNNNCTG 1 cut(s) 598
CciNI GCGGCCGC 2 cut(s) 105, 111
CfoI GCGC 5 cut(s) 721, 808, 904, 1647, 1653
Cfr10I RCCGGY 2 cut(s) 462, 887
Cfr13I GGNCC 5 cut(s) 306, 495, 554, 709, 1269
Cfr42I CCGCGG 2 cut(s) 111, 117
CseI GACGC 1 cut(s) 525
Csp6I GTAC 6 cut(s) 196, 373, 409, 421, 1012, 1278
CviAII CATG 4 cut(s) 412, 541, 1015, 1385
CviQI GTAC 6 cut(s) 196, 373, 409, 421, 1012, 1278
DinI GGCGCC 1 cut(s) 720
DpnI GATC 4 cut(s) 192, 484, 591, 602
DpnII GATC 4 cut(s) 190, 482, 589, 600
EaeI YGGCCR 8 cut(s) 105, 111, 352, 519, 889, 1255, 1339, 1707
EagI CGGCCG 3 cut(s) 105, 111, 352
Eam1104I CTCTTC 7 cut(s) 353, 786, 822, 827, 918, 1340, 1511
EarI CTCTTC 7 cut(s) 353, 786, 822, 827, 918, 1340, 1511
Ecl136II GAGCTC 1 cut(s) 49
EclXI CGGCCG 3 cut(s) 105, 111, 352
Eco130I CCWWGG 3 cut(s) 540, 1154, 1239
Eco147I AGGCCT 1 cut(s) 648
Eco24I GRGCYC 4 cut(s) 51, 159, 1247, 1665
Eco47I GGWCC 3 cut(s) 495, 554, 1269
Eco52I CGGCCG 3 cut(s) 105, 111, 352
Eco53kI GAGCTC 1 cut(s) 49
Eco57I CTGAAG 2 cut(s) 248, 1067
EcoICRI GAGCTC 1 cut(s) 49
EcoNI CCTNNNNNAGG 1 cut(s) 1773
EcoO109I RGGNCCY 1 cut(s) 709
EcoRII CCWGG 4 cut(s) 158, 201, 302, 1197
EcoT14I CCWWGG 3 cut(s) 540, 1154, 1239
EcoT38I GRGCYC 4 cut(s) 51, 159, 1247, 1665
EgeI GGCGCC 1 cut(s) 720
EheI GGCGCC 1 cut(s) 720
ErhI CCWWGG 3 cut(s) 540, 1154, 1239
Esp3I CGTCTC 2 cut(s) 143, 1457
FaeI CATG 4 cut(s) 415, 544, 1018, 1388
FaqI GGGAC 3 cut(s) 286, 292, 508
FatI CATG 4 cut(s) 411, 540, 1014, 1384
FauI CCCGC 5 cut(s) 462, 485, 853, 1573, 1597
FokI GGATG 4 cut(s) 38, 1415, 1545, 1575
FriOI GRGCYC 4 cut(s) 51, 159, 1247, 1665
GlaI GCGC 5 cut(s) 720, 807, 903, 1646, 1652
GsuI CTGGAG 2 cut(s) 507, 1028
HaeII RGCGCY 2 cut(s) 722, 905
HgaI GACGC 1 cut(s) 525
HhaI GCGC 5 cut(s) 721, 808, 904, 1647, 1653
Hin1I GRCGYC 2 cut(s) 536, 719
Hin1II CATG 4 cut(s) 415, 544, 1018, 1388
Hin6I GCGC 5 cut(s) 719, 806, 902, 1645, 1651
HinP1I GCGC 5 cut(s) 719, 806, 902, 1645, 1651
HindIII AAGCTT 1 cut(s) 546
HinfI GANTC 8 cut(s) 238, 255, 559, 1111, 1550, 1580, 1610, 1628
HphI GGTGA 3 cut(s) 247, 1243, 1508
Hpy166II GTNNAC 3 cut(s) 1234, 1499, 1527
Hpy188I TCNGA 2 cut(s) 264, 391
Hpy188III TCNNGA 6 cut(s) 220, 428, 486, 552, 593, 1456
Hpy8I GTNNAC 3 cut(s) 1234, 1499, 1527
Hpy99I CGWCG 4 cut(s) 44, 47, 320, 434
HpyCH4III ACNGT 2 cut(s) 300, 425
HpyCH4IV ACGT 2 cut(s) 9, 453
HpyCH4V TGCA 4 cut(s) 1123, 1194, 1544, 1685
HpySE526I ACGT 2 cut(s) 9, 453
Hsp92I GRCGYC 2 cut(s) 536, 719
Hsp92II CATG 4 cut(s) 415, 544, 1018, 1388
HspAI GCGC 5 cut(s) 719, 806, 902, 1645, 1651
KasI GGCGCC 1 cut(s) 718
Kpn2I TCCGGA 1 cut(s) 1455
KroI GCCGGC 1 cut(s) 462
KroNI GCCGGC 1 cut(s) 464
KspI CCGCGG 2 cut(s) 111, 117
Kzo9I GATC 4 cut(s) 190, 482, 589, 600
LmnI GCTCC 8 cut(s) 154, 185, 285, 595, 727, 997, 1181, 1284
Lsp1109I GCAGC 8 cut(s) 389, 453, 1487, 1490, 1493, 1556, 1669, 1697
LweI GCATC 3 cut(s) 444, 847, 1411
MaeII ACGT 2 cut(s) 9, 453
MaeIII GTNAC 1 cut(s) 605
MalI GATC 4 cut(s) 192, 484, 591, 602
MbiI CCGCTC 1 cut(s) 188
MboI GATC 4 cut(s) 190, 482, 589, 600
MfeI CAATTG 1 cut(s) 1220
MflI RGATCY 2 cut(s) 190, 482
MhlI GDGCHC 4 cut(s) 51, 159, 1247, 1665
MlsI TGGCCA 2 cut(s) 521, 1709
MluCI AATT 6 cut(s) 702, 1115, 1187, 1220, 1335, 1755
MluNI TGGCCA 2 cut(s) 521, 1709
Mly113I GGCGCC 1 cut(s) 719
MlyI GAGTC 1 cut(s) 1622
MmeI TCCRAC 1 cut(s) 414
Mox20I TGGCCA 2 cut(s) 521, 1709
MroI TCCGGA 1 cut(s) 1455
MroNI GCCGGC 1 cut(s) 462
MscI TGGCCA 2 cut(s) 521, 1709
MseI TTAA 1 cut(s) 705
MslI CAYNNNNRTG 1 cut(s) 527
Msp20I TGGCCA 2 cut(s) 521, 1709
MspA1I CMGCKG 3 cut(s) 110, 116, 746
MspR9I CCNGG 6 cut(s) 160, 203, 304, 716, 1199, 1660
MunI CAATTG 1 cut(s) 1220
Mva1269I GAATGC 1 cut(s) 1484
MvaI CCWGG 4 cut(s) 160, 203, 304, 1199
MvnI CGCG 4 cut(s) 110, 116, 253, 806
NaeI GCCGGC 1 cut(s) 464
NarI GGCGCC 1 cut(s) 719
NciI CCSGG 2 cut(s) 716, 1660
NcoI CCATGG 1 cut(s) 540
NdeII GATC 4 cut(s) 190, 482, 589, 600
NgoMIV GCCGGC 1 cut(s) 462
NlaIII CATG 4 cut(s) 415, 544, 1018, 1388
NlaIV GGNNCC 9 cut(s) 29, 126, 156, 496, 578, 720, 729, 993, 1270
NmeAIII GCCGAG 1 cut(s) 688
NotI GCGGCCGC 2 cut(s) 105, 111
PceI AGGCCT 1 cut(s) 648
PcsI WCGNNNNNNNCGW 1 cut(s) 533
PctI GAATGC 1 cut(s) 1484
PdiI GCCGGC 1 cut(s) 464
PfeI GAWTC 7 cut(s) 238, 255, 559, 1111, 1550, 1580, 1610
PflMI CCANNNNNTGG 1 cut(s) 898
PleI GAGTC 1 cut(s) 1622
PluTI GGCGCC 1 cut(s) 722
PpsI GAGTC 1 cut(s) 1622
Psp124BI GAGCTC 1 cut(s) 51
Psp6I CCWGG 4 cut(s) 158, 201, 302, 1197
PspGI CCWGG 4 cut(s) 158, 201, 302, 1197
PspN4I GGNNCC 9 cut(s) 29, 126, 156, 496, 578, 720, 729, 993, 1270
PspPI GGNCC 5 cut(s) 306, 495, 554, 709, 1269
PstI CTGCAG 2 cut(s) 1546, 1687
PstNI CAGNNNCTG 1 cut(s) 598
PsuI RGATCY 2 cut(s) 190, 482
RsaI GTAC 6 cut(s) 197, 374, 410, 422, 1013, 1279
RsaNI GTAC 6 cut(s) 196, 373, 409, 421, 1012, 1278
RseI CAYNNNNRTG 1 cut(s) 527
SacI GAGCTC 1 cut(s) 51
SacII CCGCGG 2 cut(s) 111, 117
SaqAI TTAA 1 cut(s) 705
Sau3AI GATC 4 cut(s) 190, 482, 589, 600
Sau96I GGNCC 5 cut(s) 306, 495, 554, 709, 1269
SchI GAGTC 1 cut(s) 1622
ScrFI CCNGG 6 cut(s) 160, 203, 304, 716, 1199, 1660
SduI GDGCHC 4 cut(s) 51, 159, 1247, 1665
SfaNI GCATC 3 cut(s) 444, 847, 1411
SfcI CTRYAG 3 cut(s) 1542, 1683, 1773
SfoI GGCGCC 1 cut(s) 720
Sfr303I CCGCGG 2 cut(s) 111, 117
SgrBI CCGCGG 2 cut(s) 111, 117
SinI GGWCC 3 cut(s) 495, 554, 1269
SmiMI CAYNNNNRTG 1 cut(s) 527
Sse9I AATT 6 cut(s) 702, 1115, 1187, 1220, 1335, 1755
SseBI AGGCCT 1 cut(s) 648
SspDI GGCGCC 1 cut(s) 718
SstI GAGCTC 1 cut(s) 51
StuI AGGCCT 1 cut(s) 648
StyD4I CCNGG 6 cut(s) 158, 201, 302, 714, 1197, 1658
StyI CCWWGG 3 cut(s) 540, 1154, 1239
TaaI ACNGT 2 cut(s) 300, 425
TaiI ACGT 2 cut(s) 12, 456
TaqI TCGA 1 cut(s) 429
TaqII GACCGA 2 cut(s) 53, 571
TasI AATT 6 cut(s) 702, 1115, 1187, 1220, 1335, 1755
TatI WGTACW 2 cut(s) 420, 1011
TfiI GAWTC 7 cut(s) 238, 255, 559, 1111, 1550, 1580, 1610
Tru1I TTAA 1 cut(s) 705
Tru9I TTAA 1 cut(s) 705
TscAI CASTG 2 cut(s) 918, 1606
TseI GCWGC 8 cut(s) 402, 466, 1475, 1478, 1481, 1544, 1682, 1685
TspDTI ATGAA 3 cut(s) 646, 1031, 1715
TspGWI ACGGA 2 cut(s) 167, 602
TspRI CASTG 2 cut(s) 918, 1606
Van91I CCANNNNNTGG 1 cut(s) 898
VpaK11BI GGWCC 3 cut(s) 495, 554, 1269
XagI CCTNNNNNAGG 1 cut(s) 1773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.