Rw2G026070
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000371
Physical Location & Seq
Reverse (-)
40011779 .. 40013900
2122 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G026070.1

Sequence Viewer

Length: 1782 bp
ATGGCCTACGTTCCGGTAGGTTTCCGGTTCCACCCGACCGACGACGAGCTCATCCGGCACTACCTGTATTTGAAGAACAAGGTCAGCAAGGGAGAAGATGAGGCGGCCGCGGCCGCGGCGGTGGTACCGGAGTTTGATTTGTATGGCGAGACGGAGCCCTGGAACATTTGGGAAGCCCACGGCGGAGCGGATCTGTACGACCAGGATTTGTTCTTCTTCACAAAGCTGAAGAAGGTGAATCCCCACGGCACGCGAATCAATCGGAAGATTGGGACGGGGACTTGGAGCGAAGGCGAACCGTCCAGGCCCATTTTCGTCGGCGAGAAGAACAAGAAGAACAAAACCCCAATCGGCCGAAAGAGGAAGTTCCGGTACGAGAACAAGCTCTCCGACCAGCACGGCTGCTGGTACATGGAGGAGTATAGTCTCGACGGCATCAAATCCGCCGACTACGTCATTTGCCGGCTGCGGGAGAACAACAGATCTGGAGGCGGGACCGGAGGGAATAGGGATTTGCTGGCCATATCGGTGGCGGCGTCCATGGAAGCTTCTGGACCGATTCCGGTGGGGTTCAGGTTCCACCCTACGGATCAGGAGCTGATCTGTTACTTTCTCTACAACAAGAACAAGGGCAAGGGCGGCAGAGGCCTGTCGTTCATCGCCGAGGAGGTGGCGGCGGCGCCCGCGGCGGAGGAGGAGGAAATTAAGGCCCTCCCGGCGCCGGAGGAGCCTCCATTGGCGACGGCGGCGGCGGAGGCGGAGGAGAGCAAAGACAACGGCAAAGAAGAGGAAGGCCACCCGCCGCCTGCGGAGGCGGAGGAAGAGAAGAGGAAGAGCGGCGGCGGAGGCGATGCGGGGGCGGAGGGAGAGAAGGAGAAGACCGGCCAAGTGTTGGCGCTGGTGTCAGTGGAGGAGGAAGAGGAGAAGAAAAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGGAAGGAGAGGGGCAAGCGGCTCCTCTGCTGTTACTGGAGTACATGAAGAACAAGGACGAAGACGAGAAAGGGCTGAAGCTGGTGGCAAGGGAGGAGGAGGCGGAGGTGGTGGAGGCGGTAGAGGTATGTAAGAAAGAGAATCAATTTTTGCACGAGTTTGATTTGTTTGGAAGCACAGAGCCTTGGGAGATATGGGAAATGTTTAGGGGAGCTGAATTGTGCAACCAGGACTTGTTCTTCTTTACACAATTGAAGAAGGTGAACCCCAAGGGCTCACGCATTGGCCGCAAGGTTGGGTCCGGCGGTACTTGGAGCGAAGGAGATGTCTCCAAGCCCATTGTTGATGACAGAACTGGAAACCAAATTGGCCGGAAGAGGAAGTTGCGGTATGAGAAAGTTGGCTCTCCACACCATGCTTGTTGGTATTTGGATGAGTATAGTCTGCTTGATGCTGATATTGGAGATTATGTCATTTGTCGACTCCGGAAGAATGACAAGTTAGCAGCAGCAGCATTCTCATCTGGTGAACCAATCCACAGCAGGAAGAGGAAGTCCACTCCTTCCACGACTGCAGCAGAATCAAAACATCCTCCCGCTACTCCACAAGAATCAAAACATCCTTCCACCACTGCGGGAGAATCAAAACCGGAGGAGGACTCATCAAAGGCAAAGCGCAAGCGCACTACCGGGCTCACACAAGTAGAGGAAGCTGCAGCAGATGTGTTGATGAATATGGCCAACAGCACCCTCAACAACAACACATTGAAACTATTTGGTATTGAAATTGGTTCTACTCCTACTATAGGAGGAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

593

Amino Acids

65.76

Weight (kDa)

5.6

Isoelectric Point (pI)

41.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 5 - 143 3.3e-25 No apical meristem (NAM) protein
NAM PF02365 366 - 470 5.3e-13 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000371)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g30540 FvH4_5g31040 FvH4_5g34901 FvH4_5g34902 FvH4_5g35290 FvH4_6g26310 FvH4_6g26330 FvH4_6g51360
malus_domestica MD03G1130400.v1.1 MD05G1005400.v1.1 MD05G1030600.v1.1 MD11G1074200.v1.1 MD11G1075500.v1.1 MD11G1075600.v1.1 MD11G1138500.v1.1 MD13G1124900.v1.1 MD15G1393000.v1.1
prunus_persica Prupe.1G063700_v2.0.a1 Prupe.1G106100_v2.0.a1 Prupe.2G196800_v2.0.a1 Prupe.2G202600_v2.0.a1 Prupe.6G057300_v2.0.a1 Prupe.6G092100_v2.0.a1 Prupe.6G098300_v2.0.a1 Prupe.6G098400_v2.0.a1 Prupe.6G112000_v2.0.a1 Prupe.8G095200_v2.0.a1 Prupe.8G097100_v2.0.a1
pyrus_communis pycom03g04400 pycom03g04810 pycom04g03340 pycom11g06160 pycom11g06170 pycom11g06280 pycom12g00070
rosa_chinensis RchiOBHm_Chr2g0126751 RchiOBHm_Chr5g0047081 RchiOBHm_Chr7g0230611 RchiOBHm_Chr7g0236441 RchiOBHm_Chr7g0236481 RchiOBHm_Chr7g0236511
rosa_laevigata RLG00000001105 RLG00000001256 RLG00000018919 RLG00000018920 RLG00000022153
rosa_multiflora Rmu_co8144300.1_g000001 Rmu_sc0000007.1_g000005 Rmu_sc0000007.1_g000006 Rmu_sc0000070.1_g000054 Rmu_sc0000588.1_g000007 Rmu_sc0002222.1_g000014 Rmu_sc0002449.1_g000028 Rmu_sc0003747.1_g000001 Rmu_sc0005733.1_g000007 Rmu_sc0007784.1_g000006 Rmu_sc0011173.1_g000003 Rmu_sc0011236.1_g000004 Rmu_sc0014124.1_g000001
rosa_roxburghii Rroxscaffold_2G00116990 Rroxscaffold_4G00294750 Rroxscaffold_4G00294760 Rroxscaffold_4G00294800
rosa_rugosa Rorug02G0264600 Rorug02G0264600 Rorug02G0564800 Rorug02G0564900
rosa_samantha Rh1AG295700 Rh1AG301300 Rh1BG128600 Rh1BG128700 Rh1BG128800 Rh1CG282300 Rh1DG164800 Rh1DG164900 Rh2AG321700 Rh2AG321800 Rh2AG644400 Rh2AG644500 Rh2BG655200 Rh2BG655300 Rh2CG309500 Rh2CG309600 Rh2CG620500 Rh2DG668700 Rh3BG170600 Rh7AG434800 Rh7BG127300 Rh7BG423300 Rh7BG423700 Rh7BG424100 Rh7BG424200 Rh7CG383900 Rh7CG432200 Rh7CG453500 Rh7DG368300 Rh7DG409100 Rh7DG438400
rosa_wichuraiana Rw0G020640 Rw2G026070 Rw2G026080 Rw5G020070 Rw7G037290 Rw7G037330 Rw7G037540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 124
AccB1I GGYRCC 3 cut(s) 124, 679, 718
AccB7I CCANNNNNTGG 1 cut(s) 892
AccBSI CCGCTC 2 cut(s) 188, 837
AccI GTMKAC 1 cut(s) 1444
AccII CGCG 4 cut(s) 110, 116, 253, 686
AccIII TCCGGA 1 cut(s) 1449
AclWI GGATC 2 cut(s) 198, 597
AcoI YGGCCR 8 cut(s) 105, 111, 352, 519, 883, 1249, 1333, 1701
AcuI CTGAAG 2 cut(s) 248, 1061
AcyI GRCGYC 3 cut(s) 536, 680, 719
AfaI GTAC 6 cut(s) 126, 197, 374, 410, 1007, 1273
AfiI CCNNNNNNNGG 5 cut(s) 469, 586, 721, 892, 1769
AgsI TTSAA 4 cut(s) 73, 1219, 1732, 1748
AjnI CCWGG 4 cut(s) 158, 201, 302, 1191
AloI GAACNNNNNNTCC 2 cut(s) 371, 403
AluBI AGCT 8 cut(s) 49, 226, 385, 548, 598, 1045, 1178, 1676
AluI AGCT 8 cut(s) 49, 226, 385, 548, 598, 1045, 1178, 1676
Alw21I GWGCWC 1 cut(s) 51
Alw26I GTCTC 3 cut(s) 143, 431, 1297
AlwI GGATC 2 cut(s) 198, 597
AlwNI CAGNNNCTG 1 cut(s) 598
Aor13HI TCCGGA 1 cut(s) 1449
ApeKI GCWGC 8 cut(s) 402, 466, 1469, 1472, 1475, 1538, 1676, 1679
ArsI GACNNNNNNTTYG 2 cut(s) 1275, 1307
Asp718I GGTACC 1 cut(s) 124
AspLEI GCGC 5 cut(s) 682, 721, 898, 1641, 1647
AspS9I GGNCC 5 cut(s) 306, 495, 554, 709, 1263
AsuC2I CCSGG 2 cut(s) 716, 1654
AsuHPI GGTGA 3 cut(s) 247, 1237, 1502
AvaII GGWCC 3 cut(s) 495, 554, 1263
BaeI ACNNNNGTAYC 2 cut(s) 116, 149
BalI TGGCCA 2 cut(s) 521, 1703
BanI GGYRCC 3 cut(s) 124, 679, 718
BanII GRGCYC 4 cut(s) 51, 159, 1241, 1659
BarI GAAGNNNNNNTAC 2 cut(s) 356, 388
BauI CACGAG 1 cut(s) 1118
BbsI GAAGAC 2 cut(s) 884, 1032
Bbv12I GWGCWC 1 cut(s) 51
BbvI GCAGC 8 cut(s) 389, 453, 1481, 1484, 1487, 1550, 1663, 1691
BceAI ACGGC 6 cut(s) 196, 262, 415, 448, 759, 793
BciT130I CCWGG 4 cut(s) 160, 203, 304, 1193
BcnI CCSGG 2 cut(s) 716, 1654
BcoDI GTCTC 3 cut(s) 143, 431, 1297
BfmI CTRYAG 3 cut(s) 1536, 1677, 1767
BfoI RGCGCY 3 cut(s) 683, 722, 899
BglI GCCNNNNNGGC 1 cut(s) 716
BglII AGATCT 1 cut(s) 482
Bme1390I CCNGG 6 cut(s) 160, 203, 304, 716, 1193, 1654
Bme18I GGWCC 3 cut(s) 495, 554, 1263
BmgT120I GGNCC 5 cut(s) 306, 495, 554, 709, 1263
BmrFI CCNGG 6 cut(s) 160, 203, 304, 716, 1193, 1654
BmsI GCATC 3 cut(s) 444, 841, 1405
BpiI GAAGAC 2 cut(s) 884, 1032
BplI GAGNNNNNCTC 2 cut(s) 1607, 1639
BpmI CTGGAG 2 cut(s) 507, 1022
BpuMI CCSGG 2 cut(s) 716, 1654
BsaHI GRCGYC 3 cut(s) 536, 680, 719
BsaWI WCCGGW 8 cut(s) 13, 24, 127, 369, 497, 562, 1449, 1612
BsaXI ACNNNNNCTCC 4 cut(s) 371, 401, 1419, 1449
Bsc4I CCNNNNNNNGG 5 cut(s) 469, 586, 721, 892, 1769
Bse118I RCCGGY 2 cut(s) 462, 881
Bse1I ACTGG 2 cut(s) 1005, 1324
BseAI TCCGGA 1 cut(s) 1449
BseBI CCWGG 4 cut(s) 160, 203, 304, 1193
BseGI GGATG 4 cut(s) 51, 1402, 1552, 1582
BseLI CCNNNNNNNGG 5 cut(s) 469, 586, 721, 892, 1769
BseNI ACTGG 2 cut(s) 1005, 1324
BseX3I CGGCCG 3 cut(s) 105, 111, 352
BseXI GCAGC 8 cut(s) 389, 453, 1481, 1484, 1487, 1550, 1663, 1691
Bsh1236I CGCG 4 cut(s) 110, 116, 253, 686
Bsh1285I CGRYCG 4 cut(s) 39, 108, 114, 355
BshNI GGYRCC 3 cut(s) 124, 679, 718
BsiEI CGRYCG 4 cut(s) 39, 108, 114, 355
BsiHKAI GWGCWC 1 cut(s) 51
BslFI GGGAC 3 cut(s) 286, 292, 508
BslI CCNNNNNNNGG 5 cut(s) 469, 586, 721, 892, 1769
BsmAI GTCTC 3 cut(s) 143, 431, 1297
BsmBI CGTCTC 1 cut(s) 143
BsmFI GGGAC 3 cut(s) 286, 292, 508
BsmI GAATGC 1 cut(s) 1478
Bsp1286I GDGCHC 4 cut(s) 51, 159, 1241, 1659
Bsp13I TCCGGA 1 cut(s) 1449
Bsp143I GATC 4 cut(s) 190, 482, 589, 600
Bsp19I CCATGG 1 cut(s) 540
BspEI TCCGGA 1 cut(s) 1449
BspFNI CGCG 4 cut(s) 110, 116, 253, 686
BspMAI CTGCAG 2 cut(s) 1540, 1681
BspPI GGATC 2 cut(s) 198, 597
BspQI GCTCTTC 1 cut(s) 827
BspT107I GGYRCC 3 cut(s) 124, 679, 718
BsrBI CCGCTC 2 cut(s) 188, 837
BsrFI RCCGGY 2 cut(s) 462, 881
BsrI ACTGG 2 cut(s) 1005, 1324
BssAI RCCGGY 2 cut(s) 462, 881
BssMI GATC 4 cut(s) 190, 482, 589, 600
BssNI GRCGYC 3 cut(s) 536, 680, 719
BssSI CACGAG 1 cut(s) 1118
BssT1I CCWWGG 3 cut(s) 540, 1148, 1233
Bst2BI CACGAG 1 cut(s) 1118
Bst2UI CCWGG 4 cut(s) 160, 203, 304, 1193
Bst4CI ACNGT 1 cut(s) 300
Bst6I CTCTTC 7 cut(s) 780, 816, 821, 827, 912, 1334, 1505
BstACI GRCGYC 3 cut(s) 536, 680, 719
BstC8I GCNNGC 7 cut(s) 251, 464, 519, 684, 807, 981, 1643
BstDSI CCRYGG 6 cut(s) 108, 114, 178, 244, 540, 684
BstENI CCTNNNNNAGG 1 cut(s) 1767
BstF5I GGATG 4 cut(s) 51, 1402, 1552, 1582
BstFNI CGCG 4 cut(s) 110, 116, 253, 686
BstH2I RGCGCY 3 cut(s) 683, 722, 899
BstHHI GCGC 5 cut(s) 682, 721, 898, 1641, 1647
BstKTI GATC 4 cut(s) 193, 485, 592, 603
BstMAI GTCTC 3 cut(s) 143, 431, 1297
BstMBI GATC 4 cut(s) 190, 482, 589, 600
BstMCI CGRYCG 4 cut(s) 39, 108, 114, 355
BstNI CCWGG 4 cut(s) 160, 203, 304, 1193
BstSCI CCNGG 6 cut(s) 158, 201, 302, 714, 1191, 1652
BstSFI CTRYAG 3 cut(s) 1536, 1677, 1767
BstUI CGCG 4 cut(s) 110, 116, 253, 686
BstV1I GCAGC 8 cut(s) 389, 453, 1481, 1484, 1487, 1550, 1663, 1691
BstV2I GAAGAC 2 cut(s) 884, 1032
BstX2I RGATCY 2 cut(s) 190, 482
BstXI CCANNNNNNTGG 1 cut(s) 529
BstYI RGATCY 2 cut(s) 190, 482
BstZI CGGCCG 3 cut(s) 105, 111, 352
BtgI CCRYGG 6 cut(s) 108, 114, 178, 244, 540, 684
BtgZI GCGATG 2 cut(s) 643, 864
BtsCI GGATG 4 cut(s) 51, 1402, 1552, 1582
BtsI GCAGTG 1 cut(s) 1593
BtsIMutI CAGTG 2 cut(s) 912, 1593
Cac8I GCNNGC 7 cut(s) 251, 464, 519, 684, 807, 981, 1643
CaiI CAGNNNCTG 1 cut(s) 598
CciNI GCGGCCGC 2 cut(s) 105, 111
CfoI GCGC 5 cut(s) 682, 721, 898, 1641, 1647
Cfr10I RCCGGY 2 cut(s) 462, 881
Cfr13I GGNCC 5 cut(s) 306, 495, 554, 709, 1263
Cfr42I CCGCGG 3 cut(s) 111, 117, 687
CseI GACGC 1 cut(s) 525
Csp6I GTAC 6 cut(s) 125, 196, 373, 409, 1006, 1272
CviAII CATG 4 cut(s) 412, 541, 1009, 1379
CviQI GTAC 6 cut(s) 125, 196, 373, 409, 1006, 1272
DinI GGCGCC 2 cut(s) 681, 720
DpnI GATC 4 cut(s) 192, 484, 591, 602
DpnII GATC 4 cut(s) 190, 482, 589, 600
EaeI YGGCCR 8 cut(s) 105, 111, 352, 519, 883, 1249, 1333, 1701
EagI CGGCCG 3 cut(s) 105, 111, 352
Eam1104I CTCTTC 7 cut(s) 780, 816, 821, 827, 912, 1334, 1505
EarI CTCTTC 7 cut(s) 780, 816, 821, 827, 912, 1334, 1505
EciI GGCGGA 9 cut(s) 198, 433, 704, 767, 773, 830, 858, 875, 1082
Ecl136II GAGCTC 1 cut(s) 49
EclXI CGGCCG 3 cut(s) 105, 111, 352
Eco130I CCWWGG 3 cut(s) 540, 1148, 1233
Eco147I AGGCCT 1 cut(s) 648
Eco24I GRGCYC 4 cut(s) 51, 159, 1241, 1659
Eco47I GGWCC 3 cut(s) 495, 554, 1263
Eco52I CGGCCG 3 cut(s) 105, 111, 352
Eco53kI GAGCTC 1 cut(s) 49
Eco57I CTGAAG 2 cut(s) 248, 1061
EcoICRI GAGCTC 1 cut(s) 49
EcoNI CCTNNNNNAGG 1 cut(s) 1767
EcoO109I RGGNCCY 1 cut(s) 709
EcoRII CCWGG 4 cut(s) 158, 201, 302, 1191
EcoT14I CCWWGG 3 cut(s) 540, 1148, 1233
EcoT38I GRGCYC 4 cut(s) 51, 159, 1241, 1659
EgeI GGCGCC 2 cut(s) 681, 720
EheI GGCGCC 2 cut(s) 681, 720
ErhI CCWWGG 3 cut(s) 540, 1148, 1233
Esp3I CGTCTC 1 cut(s) 143
FaeI CATG 4 cut(s) 415, 544, 1012, 1382
FaqI GGGAC 3 cut(s) 286, 292, 508
FatI CATG 4 cut(s) 411, 540, 1008, 1378
FauI CCCGC 7 cut(s) 462, 485, 691, 807, 847, 1567, 1591
FblI GTMKAC 1 cut(s) 1444
FokI GGATG 4 cut(s) 38, 1409, 1539, 1569
FriOI GRGCYC 4 cut(s) 51, 159, 1241, 1659
GlaI GCGC 5 cut(s) 681, 720, 897, 1640, 1646
GsuI CTGGAG 2 cut(s) 507, 1022
HaeII RGCGCY 3 cut(s) 683, 722, 899
HgaI GACGC 1 cut(s) 525
HhaI GCGC 5 cut(s) 682, 721, 898, 1641, 1647
Hin1I GRCGYC 3 cut(s) 536, 680, 719
Hin1II CATG 4 cut(s) 415, 544, 1012, 1382
Hin6I GCGC 5 cut(s) 680, 719, 896, 1639, 1645
HinP1I GCGC 5 cut(s) 680, 719, 896, 1639, 1645
HincII GTYRAC 1 cut(s) 1445
HindII GTYRAC 1 cut(s) 1445
HindIII AAGCTT 1 cut(s) 546
HinfI GANTC 9 cut(s) 238, 255, 559, 1105, 1446, 1544, 1574, 1604, 1622
HphI GGTGA 3 cut(s) 247, 1237, 1502
Hpy166II GTNNAC 4 cut(s) 1228, 1445, 1493, 1521
Hpy188I TCNGA 2 cut(s) 264, 391
Hpy188III TCNNGA 5 cut(s) 428, 486, 552, 593, 1450
Hpy8I GTNNAC 4 cut(s) 1228, 1445, 1493, 1521
Hpy99I CGWCG 5 cut(s) 44, 47, 320, 434, 745
HpyCH4III ACNGT 1 cut(s) 300
HpyCH4IV ACGT 2 cut(s) 9, 453
HpyCH4V TGCA 4 cut(s) 1117, 1188, 1538, 1679
HpySE526I ACGT 2 cut(s) 9, 453
Hsp92I GRCGYC 3 cut(s) 536, 680, 719
Hsp92II CATG 4 cut(s) 415, 544, 1012, 1382
HspAI GCGC 5 cut(s) 680, 719, 896, 1639, 1645
KasI GGCGCC 2 cut(s) 679, 718
Kpn2I TCCGGA 1 cut(s) 1449
KpnI GGTACC 1 cut(s) 128
KroI GCCGGC 1 cut(s) 462
KroNI GCCGGC 1 cut(s) 464
KspI CCGCGG 3 cut(s) 111, 117, 687
Kzo9I GATC 4 cut(s) 190, 482, 589, 600
LguI GCTCTTC 1 cut(s) 827
LmnI GCTCC 8 cut(s) 154, 185, 285, 595, 727, 991, 1175, 1278
Lsp1109I GCAGC 8 cut(s) 389, 453, 1481, 1484, 1487, 1550, 1663, 1691
LweI GCATC 3 cut(s) 444, 841, 1405
MaeII ACGT 2 cut(s) 9, 453
MaeIII GTNAC 2 cut(s) 605, 996
MalI GATC 4 cut(s) 192, 484, 591, 602
MbiI CCGCTC 2 cut(s) 188, 837
MboI GATC 4 cut(s) 190, 482, 589, 600
MfeI CAATTG 1 cut(s) 1214
MflI RGATCY 2 cut(s) 190, 482
MhlI GDGCHC 4 cut(s) 51, 159, 1241, 1659
MlsI TGGCCA 2 cut(s) 521, 1703
MluCI AATT 6 cut(s) 702, 1109, 1181, 1214, 1329, 1749
MluNI TGGCCA 2 cut(s) 521, 1703
Mly113I GGCGCC 2 cut(s) 680, 719
MlyI GAGTC 2 cut(s) 1440, 1616
MmeI TCCRAC 1 cut(s) 414
Mox20I TGGCCA 2 cut(s) 521, 1703
MroI TCCGGA 1 cut(s) 1449
MroNI GCCGGC 1 cut(s) 462
MscI TGGCCA 2 cut(s) 521, 1703
MseI TTAA 1 cut(s) 705
MslI CAYNNNNRTG 1 cut(s) 527
Msp20I TGGCCA 2 cut(s) 521, 1703
MspA1I CMGCKG 3 cut(s) 110, 116, 686
MspR9I CCNGG 6 cut(s) 160, 203, 304, 716, 1193, 1654
MunI CAATTG 1 cut(s) 1214
Mva1269I GAATGC 1 cut(s) 1478
MvaI CCWGG 4 cut(s) 160, 203, 304, 1193
MvnI CGCG 4 cut(s) 110, 116, 253, 686
NaeI GCCGGC 1 cut(s) 464
NarI GGCGCC 2 cut(s) 680, 719
NciI CCSGG 2 cut(s) 716, 1654
NcoI CCATGG 1 cut(s) 540
NdeII GATC 4 cut(s) 190, 482, 589, 600
NgoMIV GCCGGC 1 cut(s) 462
NlaIII CATG 4 cut(s) 415, 544, 1012, 1382
NmeAIII GCCGAG 1 cut(s) 688
NotI GCGGCCGC 2 cut(s) 105, 111
PceI AGGCCT 1 cut(s) 648
PciSI GCTCTTC 1 cut(s) 827
PcsI WCGNNNNNNNCGW 1 cut(s) 533
PctI GAATGC 1 cut(s) 1478
PdiI GCCGGC 1 cut(s) 464
PfeI GAWTC 7 cut(s) 238, 255, 559, 1105, 1544, 1574, 1604
PflFI GACNNNGTC 1 cut(s) 452
PflMI CCANNNNNTGG 1 cut(s) 892
PleI GAGTC 2 cut(s) 1440, 1616
PluTI GGCGCC 2 cut(s) 683, 722
PpsI GAGTC 2 cut(s) 1440, 1616
Psp124BI GAGCTC 1 cut(s) 51
Psp6I CCWGG 4 cut(s) 158, 201, 302, 1191
PspGI CCWGG 4 cut(s) 158, 201, 302, 1191
PspPI GGNCC 5 cut(s) 306, 495, 554, 709, 1263
PstI CTGCAG 2 cut(s) 1540, 1681
PstNI CAGNNNCTG 1 cut(s) 598
PsuI RGATCY 2 cut(s) 190, 482
PsyI GACNNNGTC 1 cut(s) 452
RsaI GTAC 6 cut(s) 126, 197, 374, 410, 1007, 1273
RsaNI GTAC 6 cut(s) 125, 196, 373, 409, 1006, 1272
RseI CAYNNNNRTG 1 cut(s) 527
SacI GAGCTC 1 cut(s) 51
SacII CCGCGG 3 cut(s) 111, 117, 687
SalI GTCGAC 1 cut(s) 1443
SapI GCTCTTC 1 cut(s) 827
SaqAI TTAA 1 cut(s) 705
Sau3AI GATC 4 cut(s) 190, 482, 589, 600
Sau96I GGNCC 5 cut(s) 306, 495, 554, 709, 1263
SchI GAGTC 2 cut(s) 1440, 1616
ScrFI CCNGG 6 cut(s) 160, 203, 304, 716, 1193, 1654
SduI GDGCHC 4 cut(s) 51, 159, 1241, 1659
SfaNI GCATC 3 cut(s) 444, 841, 1405
SfcI CTRYAG 3 cut(s) 1536, 1677, 1767
SfoI GGCGCC 2 cut(s) 681, 720
Sfr303I CCGCGG 3 cut(s) 111, 117, 687
SgrBI CCGCGG 3 cut(s) 111, 117, 687
SinI GGWCC 3 cut(s) 495, 554, 1263
SmiMI CAYNNNNRTG 1 cut(s) 527
Sse9I AATT 6 cut(s) 702, 1109, 1181, 1214, 1329, 1749
SseBI AGGCCT 1 cut(s) 648
SspDI GGCGCC 2 cut(s) 679, 718
SstI GAGCTC 1 cut(s) 51
StuI AGGCCT 1 cut(s) 648
StyD4I CCNGG 6 cut(s) 158, 201, 302, 714, 1191, 1652
StyI CCWWGG 3 cut(s) 540, 1148, 1233
TaaI ACNGT 1 cut(s) 300
TaiI ACGT 2 cut(s) 12, 456
TaqI TCGA 2 cut(s) 429, 1444
TaqII GACCGA 2 cut(s) 53, 571
TasI AATT 6 cut(s) 702, 1109, 1181, 1214, 1329, 1749
TatI WGTACW 1 cut(s) 1005
TfiI GAWTC 7 cut(s) 238, 255, 559, 1105, 1544, 1574, 1604
Tru1I TTAA 1 cut(s) 705
Tru9I TTAA 1 cut(s) 705
TscAI CASTG 2 cut(s) 912, 1600
TseI GCWGC 8 cut(s) 402, 466, 1469, 1472, 1475, 1538, 1676, 1679
TspDTI ATGAA 3 cut(s) 646, 1025, 1709
TspGWI ACGGA 2 cut(s) 167, 602
TspRI CASTG 2 cut(s) 912, 1600
Tth111I GACNNNGTC 1 cut(s) 452
Van91I CCANNNNNTGG 1 cut(s) 892
VpaK11BI GGWCC 3 cut(s) 495, 554, 1263
XagI CCTNNNNNAGG 1 cut(s) 1767
XmiI GTMKAC 1 cut(s) 1444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.