RchiOBHm_Chr6g0245301

Urb2/Npa2 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000376
Physical Location & Seq
Reverse (-)
1159941 .. 1164264
4324 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21985

Sequence Viewer

Length: 1548 bp
ATGCTAAAAGGTGATTTCCCCAACGCAGCATTCTTACTGAGGCAGTTGTTAATTGCCTCTTCTGCTATTTTAAGGCTAAATTTGCATATTAAGAGCGCTCCCATGTTGTCAAGCTTGGTGCATAAGTTTGCTGGCATTATGCAAGTCTTGTTATTGGAATCAGCGGACGCAGGTCAGGTGCCACACTTCTATTATTTTGTGTGTTTAGATGGTGTTCTGAAGTATCTGGAAGAATTAGGGAATCATTTTCCTTTGACTAATCCTACCTTATCCAGAGATTTGTTTGACAAGATGGTTCAGCTACAGTTACGGGCTCTAGGGAAATGCATAACTTTACAAGGGAAAAGAGCAACTCTTGCATCTCATGAAACAAGCACCAACACACCCTTAGGAGAAAGGAGATTTTCTGAAGCATCATCTTTTTCTCGCTGGGAATATTTATTGGATGAATTCAAAGCTAGGTTGAGGTCGTCATTTGCAGTGTTCATAAAGAAATCAACAGAGTTGCATCTCCAATCTGCAGTTCAAGCTATCGAAAGAGCCCTAGTTGGTGTGCGGGAAGGGTGCACAGTGAGGTATGACATATGTGTTGGAAGTGAAGTTGGAGGAAAGGTTTCTTCAATTGTTGCATCTGGCATTGATTGCTTGGATTTGGTTCTGGAATTTGTTTCAGGACGCAATTTGATTGTGGTTAAAAAATACATTCAGAGGTTAATTGCCTGCATGTTCAATGTTATTCTGCATCTGCAGAGTCCACTAATCTTCTATGAGAGATTAACTCTGAGTAAAGATGATACTGATCCAGATCCAGGAACAGTCATTCTTATGTGTGTTGATGTACTGGCAAGAATTTCTGGCAAGCATGCAATATACAAGATGGATCTCTGGCATGTAGCGCACTCGTTACGTATACCTTCAGCACTTTTTGAAGATTTCCATCTGTTAAAACATTCTAAATGTCCTGTTCCAAATGATTCTTCAACAAGTCCAAATAACCAACCATCCGATCCTGTAGCAAGTGTACATGTCTCTGGCATAGATAGGCAATACTCAATCGGTCTATATTCTGCTTGCTGCCGATTATTGCATAATGTTGTGAAGCATCACAAAAGTGAATGCGAGGGGTATGTTGCTCTACTTCAAGCTTCTGTTCGTGTTCTTCTTTATTGTTTGGAGACATTGGATGCTGTTGTGGTAGCCAGGGAAGGCTTCTTTTCATGGGAAGTAGAAGAAGGAGTCAAATGTGCATGTTTTCTCAGAAGGATTTATGAAGAGCTAAGACATCAAAAAGAGGTCTTTGGTCCACACTGTTACCACTTTTTAGCTTATTACATACGGGTTTATTCAGGATATGGCCCCCGCAAAACAGGCATCAAAAGGGAAATAGATGAAGCTCTAAGACCAGGTGTATATGCGCTGATAGATGTTTGCTCACCTGATGATCTTCAACGTCTTCATACCTCATTTGGAGAGGGTCCTTGCAGAAACACTTTGGCAACCTTGAAGCACGATTACGAACTCAATTTCCAGTACCAGGGAAAAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Urb2

Protein Analysis

515

Amino Acids

57.99

Weight (kDa)

8.06

Isoelectric Point (pI)

43.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Urb2 PF10441 276 - 514 9.3e-39 Urb2/Npa2 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000376)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G30150 AT4G30150
fragaria_vesca FvH4_2g02080 FvH4_2g02080
malus_domestica MD05G1115300.v1.1 MD10G1117200.v1.1 MD10G1117300.v1.1 MD10G1117400.v1.1 MD10G1117500.v1.1 MD10G1117600.v1.1 MD10G1117700.v1.1
prunus_persica Prupe.8G159900_v2.0.a1 Prupe.8G159900_v2.0.a1 Prupe.8G159900_v2.0.a1
pyrus_communis pycom05g10980 pycom10g10170
rosa_chinensis RchiOBHm_Chr2g0118221 RchiOBHm_Chr6g0244891 RchiOBHm_Chr6g0244901 RchiOBHm_Chr6g0244911 RchiOBHm_Chr6g0244921 RchiOBHm_Chr6g0244931 RchiOBHm_Chr6g0244961 RchiOBHm_Chr6g0244971 RchiOBHm_Chr6g0245301 RchiOBHm_Chr6g0245311 RchiOBHm_Chr6g0245351 RchiOBHm_Chr6g0245361 RchiOBHm_Chr6g0245441 RchiOBHm_Chr6g0245521 RchiOBHm_Chr6g0245531 RchiOBHm_Chr6g0245571
rosa_laevigata RLG00000015303
rosa_multiflora Rmu_sc0000471.1_g000006 Rmu_sc0000471.1_g000007 Rmu_sc0000471.1_g000008 Rmu_sc0001288.1_g000012 Rmu_sc0001925.1_g000002 Rmu_sc0002202.1_g000009 Rmu_sc0002202.1_g000016 Rmu_sc0002202.1_g000017 Rmu_sc0002202.1_g000019 Rmu_sc0002202.1_g000020 Rmu_ssc0000087.1_g000055 Rmu_ssc0000087.1_g000056
rosa_roxburghii Rroxscaffold_3G00242140 Rroxscaffold_7G00215270
rosa_rugosa Rorug05G0511800 Rorug05G0513500 Rorug05G0513900 Rorug05G0514000 Rorug05G0514200 Rorug05G0514400
rosa_samantha Rh1AG142300 Rh1DG147200 Rh6AG026300 Rh6AG026400 Rh6AG026500 Rh6AG028900 Rh6AG029000 Rh6AG029100 Rh6AG029200 Rh6AG029300 Rh6AG029400 Rh6AG029500 Rh6BG025200 Rh6CG020200 Rh6CG020300 Rh6CG020400 Rh6CG023100 Rh6CG023300 Rh6CG023500 Rh6CG023800 Rh6CG024100 Rh6CG024200 Rh6CG024400 Rh6CG024700 Rh6CG024800 Rh6CG025200 Rh6CG025400 Rh6CG025600 Rh6CG025700 Rh6CG025800 Rh6CG025900 Rh6CG026000 Rh6DG020800 Rh6DG020900 Rh6DG021000 Rh6DG023100 Rh6DG023300 Rh6DG023500 Rh6DG023700 Rh6DG023900 Rh6DG024200 Rh6DG024500 Rh6DG024700 Rh6DG024900 Rh6DG025000 Rh6DG025200 Rh6DG025300 Rh6DG025400
rosa_wichuraiana Rw2G021630 Rw2G021750 Rw6G002430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 161
AccB1I GGYRCC 1 cut(s) 178
AccI GTMKAC 1 cut(s) 910
AciI CCGC 3 cut(s) 164, 556, 1360
AclWI GGATC 4 cut(s) 794, 800, 888, 1001
AcsI RAATTY 4 cut(s) 79, 449, 662, 849
AcuI CTGAAG 3 cut(s) 239, 429, 900
AfaI GTAC 3 cut(s) 840, 1023, 1532
AfeI AGCGCT 1 cut(s) 97
AfiI CCNNNNNNNGG 2 cut(s) 809, 1534
AflIII ACRYGT 1 cut(s) 1024
AgsI TTSAA 9 cut(s) 454, 527, 621, 730, 929, 981, 1142, 1448, 1504
AjnI CCWGG 4 cut(s) 808, 1199, 1402, 1533
AjuI GAANNNNNNNTTGG 6 cut(s) 14, 46, 507, 539, 961, 993
AleI CACNNNNGTG 1 cut(s) 1110
AloI GAACNNNNNNTCC 2 cut(s) 1509, 1541
AluBI AGCT 8 cut(s) 114, 301, 458, 530, 1145, 1276, 1325, 1394
AluI AGCT 8 cut(s) 114, 301, 458, 530, 1145, 1276, 1325, 1394
Alw21I GWGCWC 1 cut(s) 569
Alw26I GTCTC 2 cut(s) 1033, 1169
Alw44I GTGCAC 1 cut(s) 565
AlwI GGATC 4 cut(s) 794, 800, 888, 1001
Aor51HI AGCGCT 1 cut(s) 97
AoxI GGCC 1 cut(s) 1354
ApaLI GTGCAC 1 cut(s) 565
ApeKI GCWGC 2 cut(s) 26, 1074
ApoI RAATTY 4 cut(s) 79, 449, 662, 849
Asp700I GAANNNNTTC 1 cut(s) 613
AspLEI GCGC 3 cut(s) 98, 898, 1417
AspS9I GGNCC 3 cut(s) 1301, 1355, 1475
AsuHPI GGTGA 2 cut(s) 23, 1425
AvaII GGWCC 2 cut(s) 1301, 1475
AxyI CCTNAGG 1 cut(s) 388
BaeGI GKGCMC 1 cut(s) 569
BanI GGYRCC 1 cut(s) 178
BanII GRGCYC 2 cut(s) 316, 544
BarI GAAGNNNNNNTAC 2 cut(s) 1496, 1528
BbsI GAAGAC 1 cut(s) 1445
Bbv12I GWGCWC 1 cut(s) 569
BbvI GCAGC 2 cut(s) 38, 1061
BccI CCATC 5 cut(s) 203, 286, 871, 945, 1009
BciT130I CCWGG 4 cut(s) 810, 1201, 1404, 1535
BcoDI GTCTC 2 cut(s) 1033, 1169
BfaI CTAG 3 cut(s) 317, 459, 545
BfmI CTRYAG 4 cut(s) 302, 519, 746, 1011
BfoI RGCGCY 1 cut(s) 99
BfuAI ACCTGC 1 cut(s) 161
BisI GCNGC 2 cut(s) 27, 1075
BlsI GCNGC 2 cut(s) 28, 1076
Bme1390I CCNGG 4 cut(s) 810, 1201, 1404, 1535
Bme18I GGWCC 2 cut(s) 1301, 1475
BmgT120I GGNCC 3 cut(s) 1301, 1355, 1475
BmiI GGNNCC 3 cut(s) 180, 1357, 1476
BmrFI CCNGG 4 cut(s) 810, 1201, 1404, 1535
BmsI GCATC 8 cut(s) 368, 422, 517, 638, 751, 1111, 1174, 1380
BoxI GACNNNNGTC 1 cut(s) 171
BpiI GAAGAC 1 cut(s) 1445
BplI GAGNNNNNCTC 2 cut(s) 763, 795
BsaAI YACGTR 1 cut(s) 908
BsaBI GATNNNNATC 3 cut(s) 798, 804, 936
BsaJI CCNNGG 2 cut(s) 1200, 1534
BsaXI ACNNNNNCTCC 2 cut(s) 597, 627
Bsc4I CCNNNNNNNGG 2 cut(s) 809, 1534
Bse1I ACTGG 2 cut(s) 846, 1528
Bse21I CCTNAGG 1 cut(s) 388
Bse8I GATNNNNATC 3 cut(s) 798, 804, 936
BseBI CCWGG 4 cut(s) 810, 1201, 1404, 1535
BseDI CCNNGG 2 cut(s) 1200, 1534
BseGI GGATG 3 cut(s) 451, 1001, 1189
BseJI GATNNNNATC 3 cut(s) 798, 804, 936
BseLI CCNNNNNNNGG 2 cut(s) 809, 1534
BseMII CTCAG 3 cut(s) 29, 773, 1270
BseNI ACTGG 2 cut(s) 846, 1528
BseSI GKGCMC 1 cut(s) 569
BseXI GCAGC 2 cut(s) 38, 1061
BseYI CCCAGC 1 cut(s) 429
BshFI GGCC 1 cut(s) 1356
BshNI GGYRCC 1 cut(s) 178
BsiHKAI GWGCWC 1 cut(s) 569
BslI CCNNNNNNNGG 2 cut(s) 809, 1534
BsmAI GTCTC 2 cut(s) 1033, 1169
BsmI GAATGC 2 cut(s) 29, 1121
BsnI GGCC 1 cut(s) 1356
Bsp1286I GDGCHC 3 cut(s) 316, 544, 569
Bsp1407I TGTACA 1 cut(s) 1021
Bsp143I GATC 5 cut(s) 799, 805, 880, 1006, 1441
BspACI CCGC 3 cut(s) 164, 556, 1360
BspANI GGCC 1 cut(s) 1356
BspCNI CTCAG 3 cut(s) 30, 774, 1269
BspHI TCATGA 1 cut(s) 364
BspLI GGNNCC 3 cut(s) 180, 1357, 1476
BspMAI CTGCAG 2 cut(s) 523, 750
BspMI ACCTGC 1 cut(s) 161
BspPI GGATC 4 cut(s) 794, 800, 888, 1001
BspQI GCTCTTC 1 cut(s) 1266
BspT107I GGYRCC 1 cut(s) 178
BsrGI TGTACA 1 cut(s) 1021
BsrI ACTGG 2 cut(s) 846, 1528
BssECI CCNNGG 2 cut(s) 1200, 1534
BssMI GATC 5 cut(s) 799, 805, 880, 1006, 1441
BssNAI GTATAC 1 cut(s) 911
Bst1107I GTATAC 1 cut(s) 911
Bst2UI CCWGG 4 cut(s) 810, 1201, 1404, 1535
Bst4CI ACNGT 4 cut(s) 306, 571, 817, 1310
Bst6I CTCTTC 2 cut(s) 64, 1266
BstAPI GCANNNNNTGC 2 cut(s) 356, 642
BstAUI TGTACA 1 cut(s) 1021
BstBAI YACGTR 1 cut(s) 908
BstC8I GCNNGC 5 cut(s) 133, 721, 860, 864, 1072
BstDEI CTNAG 6 cut(s) 38, 388, 782, 1256, 1277, 1397
BstF5I GGATG 3 cut(s) 451, 1001, 1189
BstH2I RGCGCY 1 cut(s) 99
BstHHI GCGC 3 cut(s) 98, 898, 1417
BstKTI GATC 5 cut(s) 802, 808, 883, 1009, 1444
BstMAI GTCTC 2 cut(s) 1033, 1169
BstMBI GATC 5 cut(s) 799, 805, 880, 1006, 1441
BstMWI GCNNNNNNNGC 7 cut(s) 62, 82, 356, 527, 642, 895, 1368
BstNI CCWGG 4 cut(s) 810, 1201, 1404, 1535
BstNSI RCATGY 5 cut(s) 727, 866, 893, 1028, 1251
BstPAI GACNNNNGTC 1 cut(s) 171
BstSCI CCNGG 4 cut(s) 808, 1199, 1402, 1533
BstSFI CTRYAG 4 cut(s) 302, 519, 746, 1011
BstSLI GKGCMC 1 cut(s) 569
BstSNI TACGTA 1 cut(s) 908
BstV1I GCAGC 2 cut(s) 38, 1061
BstV2I GAAGAC 1 cut(s) 1445
BstX2I RGATCY 2 cut(s) 805, 880
BstYI RGATCY 2 cut(s) 805, 880
BstZ17I GTATAC 1 cut(s) 911
Bsu36I CCTNAGG 1 cut(s) 388
BsuRI GGCC 1 cut(s) 1356
BtsCI GGATG 3 cut(s) 451, 1001, 1189
BtsI GCAGTG 1 cut(s) 486
BtsIMutI CAGTG 3 cut(s) 486, 576, 1306
BveI ACCTGC 1 cut(s) 161
Cac8I GCNNGC 5 cut(s) 133, 721, 860, 864, 1072
CciI TCATGA 1 cut(s) 364
CfoI GCGC 3 cut(s) 98, 898, 1417
Cfr13I GGNCC 3 cut(s) 1301, 1355, 1475
CseI GACGC 2 cut(s) 176, 684
CsiI ACCWGGT 1 cut(s) 1402
Csp6I GTAC 3 cut(s) 839, 1022, 1531
CviAII CATG 8 cut(s) 103, 365, 724, 863, 890, 1025, 1218, 1248
CviQI GTAC 3 cut(s) 839, 1022, 1531
DdeI CTNAG 6 cut(s) 38, 388, 782, 1256, 1277, 1397
DpnI GATC 5 cut(s) 801, 807, 882, 1008, 1443
DpnII GATC 5 cut(s) 799, 805, 880, 1006, 1441
Eam1104I CTCTTC 2 cut(s) 64, 1266
EarI CTCTTC 2 cut(s) 64, 1266
Eco105I TACGTA 1 cut(s) 908
Eco24I GRGCYC 2 cut(s) 316, 544
Eco47I GGWCC 2 cut(s) 1301, 1475
Eco47III AGCGCT 1 cut(s) 97
Eco57I CTGAAG 3 cut(s) 239, 429, 900
Eco81I CCTNAGG 1 cut(s) 388
EcoO109I RGGNCCY 1 cut(s) 1475
EcoRI GAATTC 1 cut(s) 449
EcoRII CCWGG 4 cut(s) 808, 1199, 1402, 1533
EcoT22I ATGCAT 1 cut(s) 329
EcoT38I GRGCYC 2 cut(s) 316, 544
FaeI CATG 8 cut(s) 106, 368, 727, 866, 893, 1028, 1221, 1251
FatI CATG 8 cut(s) 102, 364, 723, 862, 889, 1024, 1217, 1247
FauI CCCGC 2 cut(s) 549, 1367
FauNDI CATATG 1 cut(s) 584
FblI GTMKAC 1 cut(s) 910
Fnu4HI GCNGC 2 cut(s) 27, 1075
FokI GGATG 3 cut(s) 458, 988, 1196
FriOI GRGCYC 2 cut(s) 316, 544
Fsp4HI GCNGC 2 cut(s) 27, 1075
FspBI CTAG 3 cut(s) 317, 459, 545
GlaI GCGC 3 cut(s) 97, 897, 1416
GluI GCNGC 2 cut(s) 27, 1075
GsaI CCCAGC 1 cut(s) 433
HaeII RGCGCY 1 cut(s) 99
HaeIII GGCC 1 cut(s) 1356
HgaI GACGC 2 cut(s) 176, 684
HhaI GCGC 3 cut(s) 98, 898, 1417
Hin1II CATG 8 cut(s) 106, 368, 727, 866, 893, 1028, 1221, 1251
Hin6I GCGC 3 cut(s) 96, 896, 1415
HinP1I GCGC 3 cut(s) 96, 896, 1415
HindIII AAGCTT 2 cut(s) 112, 1143
HinfI GANTC 5 cut(s) 158, 241, 751, 974, 1236
HphI GGTGA 2 cut(s) 23, 1425
Hpy166II GTNNAC 5 cut(s) 567, 755, 911, 1022, 1304
Hpy188I TCNGA 6 cut(s) 219, 409, 708, 783, 1006, 1259
Hpy188III TCNNGA 7 cut(s) 227, 273, 365, 659, 672, 803, 1347
Hpy8I GTNNAC 5 cut(s) 567, 755, 911, 1022, 1304
HpyAV CCTTC 5 cut(s) 554, 924, 1199, 1226, 1254
HpyCH4III ACNGT 4 cut(s) 306, 571, 817, 1310
HpyCH4IV ACGT 2 cut(s) 907, 1450
HpyF10VI GCNNNNNNNGC 7 cut(s) 62, 82, 356, 527, 642, 895, 1368
HpyF3I CTNAG 6 cut(s) 38, 388, 782, 1256, 1277, 1397
HpySE526I ACGT 2 cut(s) 907, 1450
Hsp92II CATG 8 cut(s) 106, 368, 727, 866, 893, 1028, 1221, 1251
HspAI GCGC 3 cut(s) 96, 896, 1415
Kzo9I GATC 5 cut(s) 799, 805, 880, 1006, 1441
LguI GCTCTTC 1 cut(s) 1266
LmnI GCTCC 1 cut(s) 103
Lsp1109I GCAGC 2 cut(s) 38, 1061
LweI GCATC 8 cut(s) 368, 422, 517, 638, 751, 1111, 1174, 1380
MabI ACCWGGT 1 cut(s) 1402
MaeI CTAG 3 cut(s) 317, 459, 545
MaeII ACGT 2 cut(s) 907, 1450
MaeIII GTNAC 3 cut(s) 306, 903, 1310
MalI GATC 5 cut(s) 801, 807, 882, 1008, 1443
MboI GATC 5 cut(s) 799, 805, 880, 1006, 1441
MfeI CAATTG 1 cut(s) 621
MflI RGATCY 2 cut(s) 805, 880
MhlI GDGCHC 3 cut(s) 316, 544, 569
MlyI GAGTC 2 cut(s) 760, 1245
MmeI TCCRAC 2 cut(s) 571, 583
Mph1103I ATGCAT 1 cut(s) 329
MroXI GAANNNNTTC 1 cut(s) 613
MseI TTAA 7 cut(s) 50, 71, 90, 693, 713, 776, 944
MslI CAYNNNNRTG 2 cut(s) 824, 1110
MspA1I CMGCKG 1 cut(s) 164
MspR9I CCNGG 4 cut(s) 810, 1201, 1404, 1535
MunI CAATTG 1 cut(s) 621
Mva1269I GAATGC 2 cut(s) 29, 1121
MvaI CCWGG 4 cut(s) 810, 1201, 1404, 1535
MwoI GCNNNNNNNGC 7 cut(s) 62, 82, 356, 527, 642, 895, 1368
NdeI CATATG 1 cut(s) 584
NdeII GATC 5 cut(s) 799, 805, 880, 1006, 1441
NlaIII CATG 8 cut(s) 106, 368, 727, 866, 893, 1028, 1221, 1251
NlaIV GGNNCC 3 cut(s) 180, 1357, 1476
NsiI ATGCAT 1 cut(s) 329
NspI RCATGY 5 cut(s) 727, 866, 893, 1028, 1251
OliI CACNNNNGTG 1 cut(s) 1110
PaeI GCATGC 1 cut(s) 866
PagI TCATGA 1 cut(s) 364
PciI ACATGT 1 cut(s) 1024
PciSI GCTCTTC 1 cut(s) 1266
PctI GAATGC 2 cut(s) 29, 1121
PdmI GAANNNNTTC 1 cut(s) 613
PfeI GAWTC 3 cut(s) 158, 241, 974
PfoI TCCNGGA 1 cut(s) 808
PkrI GCNGC 2 cut(s) 28, 1076
PleI GAGTC 2 cut(s) 759, 1244
PpsI GAGTC 2 cut(s) 759, 1244
Ppu21I YACGTR 1 cut(s) 908
PpuMI RGGWCCY 1 cut(s) 1475
PscI ACATGT 1 cut(s) 1024
PshAI GACNNNNGTC 1 cut(s) 171
Psp5II RGGWCCY 1 cut(s) 1475
Psp6I CCWGG 4 cut(s) 808, 1199, 1402, 1533
PspFI CCCAGC 1 cut(s) 429
PspGI CCWGG 4 cut(s) 808, 1199, 1402, 1533
PspN4I GGNNCC 3 cut(s) 180, 1357, 1476
PspPI GGNCC 3 cut(s) 1301, 1355, 1475
PspPPI RGGWCCY 1 cut(s) 1475
PstI CTGCAG 2 cut(s) 523, 750
PsuI RGATCY 2 cut(s) 805, 880
RsaI GTAC 3 cut(s) 840, 1023, 1532
RsaNI GTAC 3 cut(s) 839, 1022, 1531
RseI CAYNNNNRTG 2 cut(s) 824, 1110
SapI GCTCTTC 1 cut(s) 1266
SaqAI TTAA 7 cut(s) 50, 71, 90, 693, 713, 776, 944
SatI GCNGC 2 cut(s) 27, 1075
Sau3AI GATC 5 cut(s) 799, 805, 880, 1006, 1441
Sau96I GGNCC 3 cut(s) 1301, 1355, 1475
SchI GAGTC 2 cut(s) 760, 1245
ScrFI CCNGG 4 cut(s) 810, 1201, 1404, 1535
SduI GDGCHC 3 cut(s) 316, 544, 569
SexAI ACCWGGT 1 cut(s) 1402
SfaNI GCATC 8 cut(s) 368, 422, 517, 638, 751, 1111, 1174, 1380
SfcI CTRYAG 4 cut(s) 302, 519, 746, 1011
SinI GGWCC 2 cut(s) 1301, 1475
SmiMI CAYNNNNRTG 2 cut(s) 824, 1110
SnaBI TACGTA 1 cut(s) 908
SphI GCATGC 1 cut(s) 866
SsiI CCGC 3 cut(s) 164, 556, 1360
SspI AATATT 1 cut(s) 437
SspMI CTAG 3 cut(s) 317, 459, 545
StyD4I CCNGG 4 cut(s) 808, 1199, 1402, 1533
TaaI ACNGT 4 cut(s) 306, 571, 817, 1310
TaiI ACGT 2 cut(s) 910, 1453
TaqI TCGA 1 cut(s) 534
TaqII GACCGA 1 cut(s) 1046
TatI WGTACW 2 cut(s) 838, 1021
TfiI GAWTC 3 cut(s) 158, 241, 974
Tru1I TTAA 7 cut(s) 50, 71, 90, 693, 713, 776, 944
Tru9I TTAA 7 cut(s) 50, 71, 90, 693, 713, 776, 944
TscAI CASTG 3 cut(s) 486, 576, 1313
TseI GCWGC 2 cut(s) 26, 1074
TspDTI ATGAA 7 cut(s) 381, 462, 475, 1206, 1284, 1404, 1445
TspRI CASTG 3 cut(s) 486, 576, 1313
VneI GTGCAC 1 cut(s) 565
VpaK11BI GGWCC 2 cut(s) 1301, 1475
XapI RAATTY 4 cut(s) 79, 449, 662, 849
XceI RCATGY 5 cut(s) 727, 866, 893, 1028, 1251
XmiI GTMKAC 1 cut(s) 910
XmnI GAANNNNTTC 1 cut(s) 613
XspI CTAG 3 cut(s) 317, 459, 545
Zsp2I ATGCAT 1 cut(s) 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.