Urb2/Npa2 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 327 |
| AciI | CCGC | 2 cut(s) | 98, 200 |
| AcuI | CTGAAG | 1 cut(s) | 192 |
| AgsI | TTSAA | 5 cut(s) | 37, 71, 355, 454, 533 |
| AleI | CACNNNNGTG | 1 cut(s) | 295 |
| AluBI | AGCT | 2 cut(s) | 408, 443 |
| AluI | AGCT | 2 cut(s) | 408, 443 |
| Alw21I | GWGCWC | 2 cut(s) | 156, 429 |
| ApeKI | GCWGC | 2 cut(s) | 125, 405 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 359 |
| AsuHPI | GGTGA | 1 cut(s) | 89 |
| BaeGI | GKGCMC | 1 cut(s) | 332 |
| BanI | GGYRCC | 1 cut(s) | 327 |
| Bbv12I | GWGCWC | 2 cut(s) | 156, 429 |
| BbvI | GCAGC | 2 cut(s) | 137, 417 |
| BccI | CCATC | 2 cut(s) | 142, 214 |
| BciVI | GTATCC | 1 cut(s) | 196 |
| BfuI | GTATCC | 1 cut(s) | 196 |
| BglII | AGATCT | 1 cut(s) | 102 |
| BisI | GCNGC | 2 cut(s) | 126, 406 |
| BlsI | GCNGC | 2 cut(s) | 127, 407 |
| BmiI | GGNNCC | 1 cut(s) | 329 |
| BmsI | GCATC | 1 cut(s) | 534 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 143, 175 |
| BsaBI | GATNNNNATC | 1 cut(s) | 224 |
| Bse1I | ACTGG | 2 cut(s) | 142, 501 |
| Bse3DI | GCAATG | 1 cut(s) | 278 |
| Bse8I | GATNNNNATC | 1 cut(s) | 224 |
| BseJI | GATNNNNATC | 1 cut(s) | 224 |
| BseMI | GCAATG | 1 cut(s) | 278 |
| BseNI | ACTGG | 2 cut(s) | 142, 501 |
| BseSI | GKGCMC | 1 cut(s) | 332 |
| BseXI | GCAGC | 2 cut(s) | 137, 417 |
| BsgI | GTGCAG | 1 cut(s) | 273 |
| BshNI | GGYRCC | 1 cut(s) | 327 |
| BsiHKAI | GWGCWC | 2 cut(s) | 156, 429 |
| Bsp1286I | GDGCHC | 3 cut(s) | 156, 332, 429 |
| Bsp143I | GATC | 3 cut(s) | 102, 175, 536 |
| BspACI | CCGC | 2 cut(s) | 98, 200 |
| BspLI | GGNNCC | 1 cut(s) | 329 |
| BspT107I | GGYRCC | 1 cut(s) | 327 |
| BsrDI | GCAATG | 1 cut(s) | 278 |
| BsrI | ACTGG | 2 cut(s) | 142, 501 |
| BssMI | GATC | 3 cut(s) | 102, 175, 536 |
| Bst4CI | ACNGT | 1 cut(s) | 486 |
| Bst6I | CTCTTC | 2 cut(s) | 112, 350 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstKTI | GATC | 3 cut(s) | 105, 178, 539 |
| BstMBI | GATC | 3 cut(s) | 102, 175, 536 |
| BstNSI | RCATGY | 2 cut(s) | 8, 568 |
| BstSLI | GKGCMC | 1 cut(s) | 332 |
| BstV1I | GCAGC | 2 cut(s) | 137, 417 |
| BstX2I | RGATCY | 1 cut(s) | 102 |
| BstYI | RGATCY | 1 cut(s) | 102 |
| BsuI | GTATCC | 1 cut(s) | 196 |
| BtsI | GCAGTG | 1 cut(s) | 285 |
| BtsIMutI | CAGTG | 3 cut(s) | 135, 285, 491 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CviAII | CATG | 6 cut(s) | 5, 320, 324, 335, 437, 565 |
| CviJI | RGCY | 4 cut(s) | 14, 25, 408, 443 |
| CviKI_1 | RGCY | 4 cut(s) | 14, 25, 408, 443 |
| DpnI | GATC | 3 cut(s) | 104, 177, 538 |
| DpnII | GATC | 3 cut(s) | 102, 175, 536 |
| Eam1104I | CTCTTC | 2 cut(s) | 112, 350 |
| EarI | CTCTTC | 2 cut(s) | 112, 350 |
| Eco57I | CTGAAG | 1 cut(s) | 192 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 325 |
| FaeI | CATG | 6 cut(s) | 8, 323, 327, 338, 440, 568 |
| FatI | CATG | 6 cut(s) | 4, 319, 323, 334, 436, 564 |
| Fnu4HI | GCNGC | 2 cut(s) | 126, 406 |
| Fsp4HI | GCNGC | 2 cut(s) | 126, 406 |
| GluI | GCNGC | 2 cut(s) | 126, 406 |
| Hin1II | CATG | 6 cut(s) | 8, 323, 327, 338, 440, 568 |
| HinfI | GANTC | 3 cut(s) | 132, 360, 497 |
| HphI | GGTGA | 1 cut(s) | 89 |
| Hpy166II | GTNNAC | 1 cut(s) | 268 |
| Hpy188I | TCNGA | 1 cut(s) | 172 |
| Hpy188III | TCNNGA | 1 cut(s) | 494 |
| Hpy8I | GTNNAC | 1 cut(s) | 268 |
| HpyAV | CCTTC | 1 cut(s) | 398 |
| HpyCH4III | ACNGT | 1 cut(s) | 486 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 91, 290, 323, 568, 591 |
| Hsp92II | CATG | 6 cut(s) | 8, 323, 327, 338, 440, 568 |
| Kzo9I | GATC | 3 cut(s) | 102, 175, 536 |
| LmnI | GCTCC | 1 cut(s) | 151 |
| LpnPI | CCDG | 7 cut(s) | 71, 114, 123, 280, 433, 514, 567 |
| Lsp1109I | GCAGC | 2 cut(s) | 137, 417 |
| LweI | GCATC | 1 cut(s) | 534 |
| MaeIII | GTNAC | 2 cut(s) | 77, 460 |
| MalI | GATC | 3 cut(s) | 104, 177, 538 |
| MboI | GATC | 3 cut(s) | 102, 175, 536 |
| MboII | GAAGA | 4 cut(s) | 99, 185, 367, 466 |
| MflI | RGATCY | 1 cut(s) | 102 |
| MhlI | GDGCHC | 3 cut(s) | 156, 332, 429 |
| MlyI | GAGTC | 1 cut(s) | 126 |
| MnlI | CCTC | 7 cut(s) | 108, 115, 167, 342, 349, 374, 570 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 325 |
| MroXI | GAANNNNTTC | 1 cut(s) | 359 |
| MseI | TTAA | 2 cut(s) | 374, 601 |
| MslI | CAYNNNNRTG | 2 cut(s) | 295, 484 |
| NdeII | GATC | 3 cut(s) | 102, 175, 536 |
| NlaIII | CATG | 6 cut(s) | 8, 323, 327, 338, 440, 568 |
| NlaIV | GGNNCC | 1 cut(s) | 329 |
| NmuCI | GTSAC | 2 cut(s) | 77, 460 |
| NsiI | ATGCAT | 2 cut(s) | 6, 325 |
| NspI | RCATGY | 2 cut(s) | 8, 568 |
| OliI | CACNNNNGTG | 1 cut(s) | 295 |
| PaeI | GCATGC | 1 cut(s) | 8 |
| PdmI | GAANNNNTTC | 1 cut(s) | 359 |
| PfeI | GAWTC | 2 cut(s) | 360, 497 |
| PkrI | GCNGC | 2 cut(s) | 127, 407 |
| PleI | GAGTC | 1 cut(s) | 126 |
| PpsI | GAGTC | 1 cut(s) | 126 |
| PspN4I | GGNNCC | 1 cut(s) | 329 |
| PsuI | RGATCY | 1 cut(s) | 102 |
| RseI | CAYNNNNRTG | 2 cut(s) | 295, 484 |
| SaqAI | TTAA | 2 cut(s) | 374, 601 |
| SatI | GCNGC | 2 cut(s) | 126, 406 |
| Sau3AI | GATC | 3 cut(s) | 102, 175, 536 |
| SchI | GAGTC | 1 cut(s) | 126 |
| SduI | GDGCHC | 3 cut(s) | 156, 332, 429 |
| SetI | ASST | 4 cut(s) | 159, 410, 445, 452 |
| SfaNI | GCATC | 1 cut(s) | 534 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 295, 484 |
| SphI | GCATGC | 1 cut(s) | 8 |
| SsiI | CCGC | 2 cut(s) | 98, 200 |
| SspI | AATATT | 4 cut(s) | 62, 189, 316, 597 |
| TaaI | ACNGT | 1 cut(s) | 486 |
| TfiI | GAWTC | 2 cut(s) | 360, 497 |
| Tru1I | TTAA | 2 cut(s) | 374, 601 |
| Tru9I | TTAA | 2 cut(s) | 374, 601 |
| TscAI | CASTG | 3 cut(s) | 142, 292, 491 |
| TseFI | GTSAC | 2 cut(s) | 77, 460 |
| TseI | GCWGC | 2 cut(s) | 125, 405 |
| Tsp45I | GTSAC | 2 cut(s) | 77, 460 |
| TspDTI | ATGAA | 4 cut(s) | 246, 255, 308, 453 |
| TspRI | CASTG | 3 cut(s) | 142, 292, 491 |
| XceI | RCATGY | 2 cut(s) | 8, 568 |
| XmnI | GAANNNNTTC | 1 cut(s) | 359 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 325 |