Urb2/Npa2 family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Urb2 | PF10441 | 709 - 765 | 3.1e-11 | Urb2/Npa2 family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 27 |
| AccB1I | GGYRCC | 1 cut(s) | 1032 |
| AciI | CCGC | 3 cut(s) | 803, 1753, 1861 |
| AclWI | GGATC | 3 cut(s) | 590, 2099, 2105 |
| AcsI | RAATTY | 5 cut(s) | 113, 332, 1300, 1470, 1967 |
| AcuI | CTGAAG | 4 cut(s) | 603, 897, 1175, 1532 |
| AfaI | GTAC | 3 cut(s) | 612, 1488, 2285 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 2114, 2287 |
| AjiI | CACGTC | 1 cut(s) | 1668 |
| AjnI | CCWGG | 3 cut(s) | 2113, 2155, 2286 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1812, 1844 |
| AleI | CACNNNNGTG | 1 cut(s) | 1000 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2262, 2294 |
| Alw21I | GWGCWC | 4 cut(s) | 861, 1131, 1673, 1874 |
| Alw26I | GTCTC | 1 cut(s) | 415 |
| Alw44I | GTGCAC | 1 cut(s) | 1870 |
| AlwI | GGATC | 3 cut(s) | 590, 2099, 2105 |
| AoxI | GGCC | 1 cut(s) | 1351 |
| ApaLI | GTGCAC | 1 cut(s) | 1870 |
| ApeKI | GCWGC | 4 cut(s) | 479, 677, 830, 1110 |
| ApoI | RAATTY | 5 cut(s) | 113, 332, 1300, 1470, 1967 |
| AseI | ATTAAT | 1 cut(s) | 266 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1064, 1918 |
| AspLEI | GCGC | 2 cut(s) | 251, 2170 |
| AspS9I | GGNCC | 3 cut(s) | 305, 1351, 2228 |
| AsuHPI | GGTGA | 2 cut(s) | 794, 2178 |
| AvaII | GGWCC | 2 cut(s) | 305, 2228 |
| BaeGI | GKGCMC | 2 cut(s) | 1037, 1874 |
| BanI | GGYRCC | 1 cut(s) | 1032 |
| BanII | GRGCYC | 1 cut(s) | 1849 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2249, 2281 |
| BbsI | GAAGAC | 2 cut(s) | 1472, 2198 |
| Bbv12I | GWGCWC | 4 cut(s) | 861, 1131, 1673, 1874 |
| BbvI | GCAGC | 4 cut(s) | 491, 689, 842, 1122 |
| BccI | CCATC | 6 cut(s) | 135, 559, 847, 919, 1373, 1901 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1351, 1385 |
| BciT130I | CCWGG | 3 cut(s) | 2115, 2157, 2288 |
| BcoDI | GTCTC | 1 cut(s) | 415 |
| BfaI | CTAG | 6 cut(s) | 206, 378, 1355, 1476, 1484, 1850 |
| BfmI | CTRYAG | 5 cut(s) | 519, 1640, 1653, 1824, 2051 |
| BfoI | RGCGCY | 1 cut(s) | 252 |
| BglII | AGATCT | 2 cut(s) | 807, 1233 |
| BisI | GCNGC | 4 cut(s) | 480, 678, 831, 1111 |
| BlpI | GCTNAGC | 2 cut(s) | 1404, 1672 |
| BlsI | GCNGC | 4 cut(s) | 481, 679, 832, 1112 |
| Bme1390I | CCNGG | 3 cut(s) | 2115, 2157, 2288 |
| Bme18I | GGWCC | 2 cut(s) | 305, 2228 |
| BmgBI | CACGTC | 1 cut(s) | 1668 |
| BmgT120I | GGNCC | 3 cut(s) | 305, 1351, 2228 |
| BmiI | GGNNCC | 3 cut(s) | 1034, 1352, 2229 |
| BmrFI | CCNGG | 3 cut(s) | 2115, 2157, 2288 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1760 |
| BpiI | GAAGAC | 2 cut(s) | 1472, 2198 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 848, 880, 2068, 2100 |
| BpmI | CTGGAG | 2 cut(s) | 92, 480 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1404, 1672 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1232, 2103, 2109 |
| BsaJI | CCNNGG | 1 cut(s) | 2287 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1375, 1405, 1902, 1932 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 2114, 2287 |
| Bse1I | ACTGG | 3 cut(s) | 232, 1203, 2281 |
| Bse3DI | GCAATG | 3 cut(s) | 983, 1166, 1612 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1232, 2103, 2109 |
| BseBI | CCWGG | 3 cut(s) | 2115, 2157, 2288 |
| BseDI | CCNNGG | 1 cut(s) | 2287 |
| BseGI | GGATG | 5 cut(s) | 84, 325, 570, 1651, 1686 |
| BseJI | GATNNNNATC | 3 cut(s) | 1232, 2103, 2109 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 2114, 2287 |
| BseMI | GCAATG | 3 cut(s) | 983, 1166, 1612 |
| BseMII | CTCAG | 2 cut(s) | 1686, 2099 |
| BseNI | ACTGG | 3 cut(s) | 232, 1203, 2281 |
| BseRI | GAGGAG | 1 cut(s) | 532 |
| BseSI | GKGCMC | 2 cut(s) | 1037, 1874 |
| BseXI | GCAGC | 4 cut(s) | 491, 689, 842, 1122 |
| BsgI | GTGCAG | 3 cut(s) | 696, 978, 1602 |
| BshFI | GGCC | 1 cut(s) | 1353 |
| BshNI | GGYRCC | 1 cut(s) | 1032 |
| BsiHKAI | GWGCWC | 4 cut(s) | 861, 1131, 1673, 1874 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 2114, 2287 |
| BsmAI | GTCTC | 1 cut(s) | 415 |
| BsmI | GAATGC | 1 cut(s) | 128 |
| BsnI | GGCC | 1 cut(s) | 1353 |
| Bsp1286I | GDGCHC | 6 cut(s) | 861, 1037, 1131, 1673, 1849, 1874 |
| Bsp1407I | TGTACA | 1 cut(s) | 610 |
| Bsp143I | GATC | 9 cut(s) | 372, 582, 807, 880, 1233, 1368, 2104, 2110, 2194 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1404, 1672 |
| BspACI | CCGC | 3 cut(s) | 803, 1753, 1861 |
| BspANI | GGCC | 1 cut(s) | 1353 |
| BspCNI | CTCAG | 2 cut(s) | 1685, 2098 |
| BspLI | GGNNCC | 3 cut(s) | 1034, 1352, 2229 |
| BspMAI | CTGCAG | 5 cut(s) | 523, 1644, 1657, 1828, 2055 |
| BspPI | GGATC | 3 cut(s) | 590, 2099, 2105 |
| BspT107I | GGYRCC | 1 cut(s) | 1032 |
| BsrDI | GCAATG | 3 cut(s) | 983, 1166, 1612 |
| BsrGI | TGTACA | 1 cut(s) | 610 |
| BsrI | ACTGG | 3 cut(s) | 232, 1203, 2281 |
| BssECI | CCNNGG | 1 cut(s) | 2287 |
| BssMI | GATC | 9 cut(s) | 372, 582, 807, 880, 1233, 1368, 2104, 2110, 2194 |
| Bst2UI | CCWGG | 3 cut(s) | 2115, 2157, 2288 |
| Bst4CI | ACNGT | 7 cut(s) | 146, 236, 352, 674, 1188, 1565, 1876 |
| Bst6I | CTCTTC | 3 cut(s) | 633, 817, 1055 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1947 |
| BstAUI | TGTACA | 1 cut(s) | 610 |
| BstC8I | GCNNGC | 6 cut(s) | 140, 477, 711, 1360, 1722, 2026 |
| BstDEI | CTNAG | 5 cut(s) | 131, 1404, 1672, 2085, 2150 |
| BstF5I | GGATG | 5 cut(s) | 84, 325, 570, 1651, 1686 |
| BstH2I | RGCGCY | 1 cut(s) | 252 |
| BstHHI | GCGC | 2 cut(s) | 251, 2170 |
| BstKTI | GATC | 9 cut(s) | 375, 585, 810, 883, 1236, 1371, 2107, 2113, 2197 |
| BstMAI | GTCTC | 1 cut(s) | 415 |
| BstMBI | GATC | 9 cut(s) | 372, 582, 807, 880, 1233, 1368, 2104, 2110, 2194 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1359, 1832, 1947 |
| BstNI | CCWGG | 3 cut(s) | 2115, 2157, 2288 |
| BstNSI | RCATGY | 4 cut(s) | 713, 1362, 1632, 2032 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1760 |
| BstSCI | CCNGG | 3 cut(s) | 2113, 2155, 2286 |
| BstSFI | CTRYAG | 5 cut(s) | 519, 1640, 1653, 1824, 2051 |
| BstSLI | GKGCMC | 2 cut(s) | 1037, 1874 |
| BstV1I | GCAGC | 4 cut(s) | 491, 689, 842, 1122 |
| BstV2I | GAAGAC | 2 cut(s) | 1472, 2198 |
| BstX2I | RGATCY | 3 cut(s) | 807, 1233, 2110 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2131 |
| BstYI | RGATCY | 3 cut(s) | 807, 1233, 2110 |
| BsuRI | GGCC | 1 cut(s) | 1353 |
| BtrI | CACGTC | 1 cut(s) | 1668 |
| BtsCI | GGATG | 5 cut(s) | 84, 325, 570, 1651, 1686 |
| BtsI | GCAGTG | 2 cut(s) | 1668, 1791 |
| BtsIMutI | CAGTG | 5 cut(s) | 38, 1193, 1668, 1791, 1881 |
| Cac8I | GCNNGC | 6 cut(s) | 140, 477, 711, 1360, 1722, 2026 |
| CfoI | GCGC | 2 cut(s) | 251, 2170 |
| Cfr13I | GGNCC | 3 cut(s) | 305, 1351, 2228 |
| CseI | GACGC | 2 cut(s) | 1765, 1989 |
| CsiI | ACCWGGT | 1 cut(s) | 2155 |
| Csp6I | GTAC | 3 cut(s) | 611, 1487, 2284 |
| CviQI | GTAC | 3 cut(s) | 611, 1487, 2284 |
| DdeI | CTNAG | 5 cut(s) | 131, 1404, 1672, 2085, 2150 |
| DpnI | GATC | 9 cut(s) | 374, 584, 809, 882, 1235, 1370, 2106, 2112, 2196 |
| DpnII | GATC | 9 cut(s) | 372, 582, 807, 880, 1233, 1368, 2104, 2110, 2194 |
| DraI | TTTAAA | 1 cut(s) | 1299 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 27 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 27 |
| Eam1104I | CTCTTC | 3 cut(s) | 633, 817, 1055 |
| EarI | CTCTTC | 3 cut(s) | 633, 817, 1055 |
| Eco24I | GRGCYC | 1 cut(s) | 1849 |
| Eco47I | GGWCC | 2 cut(s) | 305, 2228 |
| Eco57I | CTGAAG | 4 cut(s) | 603, 897, 1175, 1532 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1351, 2228 |
| EcoRII | CCWGG | 3 cut(s) | 2113, 2155, 2286 |
| EcoT22I | ATGCAT | 3 cut(s) | 711, 1030, 1364 |
| EcoT38I | GRGCYC | 1 cut(s) | 1849 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 150, 182 |
| FauI | CCCGC | 1 cut(s) | 1854 |
| FauNDI | CATATG | 1 cut(s) | 1889 |
| Fnu4HI | GCNGC | 4 cut(s) | 480, 678, 831, 1111 |
| FokI | GGATG | 5 cut(s) | 91, 332, 577, 1658, 1673 |
| FriOI | GRGCYC | 1 cut(s) | 1849 |
| Fsp4HI | GCNGC | 4 cut(s) | 480, 678, 831, 1111 |
| FspBI | CTAG | 6 cut(s) | 206, 378, 1355, 1476, 1484, 1850 |
| GlaI | GCGC | 2 cut(s) | 250, 2169 |
| GluI | GCNGC | 4 cut(s) | 480, 678, 831, 1111 |
| GsuI | CTGGAG | 2 cut(s) | 92, 480 |
| HaeII | RGCGCY | 1 cut(s) | 252 |
| HaeIII | GGCC | 1 cut(s) | 1353 |
| HgaI | GACGC | 2 cut(s) | 1765, 1989 |
| HhaI | GCGC | 2 cut(s) | 251, 2170 |
| Hin6I | GCGC | 2 cut(s) | 249, 2168 |
| HinP1I | GCGC | 2 cut(s) | 249, 2168 |
| HincII | GTYRAC | 2 cut(s) | 48, 931 |
| HindII | GTYRAC | 2 cut(s) | 48, 931 |
| HindIII | AAGCTT | 1 cut(s) | 1701 |
| HpaI | GTTAAC | 1 cut(s) | 48 |
| HphI | GGTGA | 2 cut(s) | 794, 2178 |
| Hpy166II | GTNNAC | 8 cut(s) | 48, 328, 931, 973, 1521, 1637, 1872, 2060 |
| Hpy188III | TCNNGA | 8 cut(s) | 71, 155, 497, 507, 1502, 1964, 1977, 2108 |
| Hpy8I | GTNNAC | 8 cut(s) | 48, 328, 931, 973, 1521, 1637, 1872, 2060 |
| HpyAV | CCTTC | 5 cut(s) | 11, 251, 627, 1595, 1859 |
| HpyCH4III | ACNGT | 7 cut(s) | 146, 236, 352, 674, 1188, 1565, 1876 |
| HpyCH4IV | ACGT | 2 cut(s) | 1667, 2203 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1359, 1832, 1947 |
| HpyF3I | CTNAG | 5 cut(s) | 131, 1404, 1672, 2085, 2150 |
| HpySE526I | ACGT | 2 cut(s) | 1667, 2203 |
| HspAI | GCGC | 2 cut(s) | 249, 2168 |
| KspAI | GTTAAC | 1 cut(s) | 48 |
| Kzo9I | GATC | 9 cut(s) | 372, 582, 807, 880, 1233, 1368, 2104, 2110, 2194 |
| LmnI | GCTCC | 2 cut(s) | 458, 856 |
| Lsp1109I | GCAGC | 4 cut(s) | 491, 689, 842, 1122 |
| MabI | ACCWGGT | 1 cut(s) | 2155 |
| MaeI | CTAG | 6 cut(s) | 206, 378, 1355, 1476, 1484, 1850 |
| MaeII | ACGT | 2 cut(s) | 1667, 2203 |
| MaeIII | GTNAC | 5 cut(s) | 220, 236, 346, 782, 1663 |
| MalI | GATC | 9 cut(s) | 374, 584, 809, 882, 1235, 1370, 2106, 2112, 2196 |
| MboI | GATC | 9 cut(s) | 372, 582, 807, 880, 1233, 1368, 2104, 2110, 2194 |
| MfeI | CAATTG | 1 cut(s) | 1926 |
| MflI | RGATCY | 3 cut(s) | 807, 1233, 2110 |
| MhlI | GDGCHC | 6 cut(s) | 861, 1037, 1131, 1673, 1849, 1874 |
| MlyI | GAGTC | 4 cut(s) | 218, 417, 831, 2065 |
| MmeI | TCCRAC | 1 cut(s) | 283 |
| Mph1103I | ATGCAT | 3 cut(s) | 711, 1030, 1364 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1064, 1918 |
| MseI | TTAA | 8 cut(s) | 47, 150, 266, 695, 1079, 1298, 1998, 2018 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1000, 1186, 1622, 2129 |
| MspA1I | CMGCKG | 2 cut(s) | 680, 1753 |
| MspR9I | CCNGG | 3 cut(s) | 2115, 2157, 2288 |
| MunI | CAATTG | 1 cut(s) | 1926 |
| Mva1269I | GAATGC | 1 cut(s) | 128 |
| MvaI | CCWGG | 3 cut(s) | 2115, 2157, 2288 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1359, 1832, 1947 |
| NdeI | CATATG | 1 cut(s) | 1889 |
| NdeII | GATC | 9 cut(s) | 372, 582, 807, 880, 1233, 1368, 2104, 2110, 2194 |
| NlaIV | GGNNCC | 3 cut(s) | 1034, 1352, 2229 |
| NmuCI | GTSAC | 4 cut(s) | 220, 346, 782, 1663 |
| NsiI | ATGCAT | 3 cut(s) | 711, 1030, 1364 |
| NspI | RCATGY | 4 cut(s) | 713, 1362, 1632, 2032 |
| OliI | CACNNNNGTG | 1 cut(s) | 1000 |
| PaeI | GCATGC | 2 cut(s) | 713, 1362 |
| PctI | GAATGC | 1 cut(s) | 128 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1064, 1918 |
| PfeI | GAWTC | 9 cut(s) | 65, 359, 683, 1065, 1199, 1427, 1649, 1747, 2079 |
| PfoI | TCCNGGA | 1 cut(s) | 2113 |
| PkrI | GCNGC | 4 cut(s) | 481, 679, 832, 1112 |
| PleI | GAGTC | 4 cut(s) | 217, 416, 831, 2064 |
| PpsI | GAGTC | 4 cut(s) | 217, 416, 831, 2064 |
| PpuMI | RGGWCCY | 1 cut(s) | 2228 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1760 |
| PshBI | ATTAAT | 1 cut(s) | 266 |
| Psp5II | RGGWCCY | 1 cut(s) | 2228 |
| Psp6I | CCWGG | 3 cut(s) | 2113, 2155, 2286 |
| PspGI | CCWGG | 3 cut(s) | 2113, 2155, 2286 |
| PspN4I | GGNNCC | 3 cut(s) | 1034, 1352, 2229 |
| PspPI | GGNCC | 3 cut(s) | 305, 1351, 2228 |
| PspPPI | RGGWCCY | 1 cut(s) | 2228 |
| PstI | CTGCAG | 5 cut(s) | 523, 1644, 1657, 1828, 2055 |
| PsuI | RGATCY | 3 cut(s) | 807, 1233, 2110 |
| PvuII | CAGCTG | 1 cut(s) | 680 |
| RsaI | GTAC | 3 cut(s) | 612, 1488, 2285 |
| RsaNI | GTAC | 3 cut(s) | 611, 1487, 2284 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1000, 1186, 1622, 2129 |
| SaqAI | TTAA | 8 cut(s) | 47, 150, 266, 695, 1079, 1298, 1998, 2018 |
| SatI | GCNGC | 4 cut(s) | 480, 678, 831, 1111 |
| Sau3AI | GATC | 9 cut(s) | 372, 582, 807, 880, 1233, 1368, 2104, 2110, 2194 |
| Sau96I | GGNCC | 3 cut(s) | 305, 1351, 2228 |
| SchI | GAGTC | 4 cut(s) | 218, 417, 831, 2065 |
| ScrFI | CCNGG | 3 cut(s) | 2115, 2157, 2288 |
| SduI | GDGCHC | 6 cut(s) | 861, 1037, 1131, 1673, 1849, 1874 |
| SexAI | ACCWGGT | 1 cut(s) | 2155 |
| SfcI | CTRYAG | 5 cut(s) | 519, 1640, 1653, 1824, 2051 |
| SinI | GGWCC | 2 cut(s) | 305, 2228 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1000, 1186, 1622, 2129 |
| SphI | GCATGC | 2 cut(s) | 713, 1362 |
| SsiI | CCGC | 3 cut(s) | 803, 1753, 1861 |
| SspI | AATATT | 3 cut(s) | 767, 894, 1021 |
| SspMI | CTAG | 6 cut(s) | 206, 378, 1355, 1476, 1484, 1850 |
| StyD4I | CCNGG | 3 cut(s) | 2113, 2155, 2286 |
| TaaI | ACNGT | 7 cut(s) | 146, 236, 352, 674, 1188, 1565, 1876 |
| TaiI | ACGT | 2 cut(s) | 1670, 2206 |
| TaqI | TCGA | 3 cut(s) | 442, 1371, 1839 |
| TatI | WGTACW | 2 cut(s) | 610, 1486 |
| TfiI | GAWTC | 9 cut(s) | 65, 359, 683, 1065, 1199, 1427, 1649, 1747, 2079 |
| Tru1I | TTAA | 8 cut(s) | 47, 150, 266, 695, 1079, 1298, 1998, 2018 |
| Tru9I | TTAA | 8 cut(s) | 47, 150, 266, 695, 1079, 1298, 1998, 2018 |
| TscAI | CASTG | 5 cut(s) | 38, 1193, 1668, 1791, 1881 |
| TseFI | GTSAC | 4 cut(s) | 220, 346, 782, 1663 |
| TseI | GCWGC | 4 cut(s) | 479, 677, 830, 1110 |
| Tsp45I | GTSAC | 4 cut(s) | 220, 346, 782, 1663 |
| TspGWI | ACGGA | 1 cut(s) | 1634 |
| TspRI | CASTG | 5 cut(s) | 38, 1193, 1668, 1791, 1881 |
| VneI | GTGCAC | 1 cut(s) | 1870 |
| VpaK11BI | GGWCC | 2 cut(s) | 305, 2228 |
| VspI | ATTAAT | 1 cut(s) | 266 |
| XapI | RAATTY | 5 cut(s) | 113, 332, 1300, 1470, 1967 |
| XceI | RCATGY | 4 cut(s) | 713, 1362, 1632, 2032 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 996 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1064, 1918 |
| XspI | CTAG | 6 cut(s) | 206, 378, 1355, 1476, 1484, 1850 |
| Zsp2I | ATGCAT | 3 cut(s) | 711, 1030, 1364 |