RLG00000013212

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000290
Physical Location & Seq
Reverse (-)
27744603 .. 27747990
3388 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013212

Sequence Viewer

Length: 1695 bp
ATGGGTTCCAAGAAGAAGGGAAAGGCTGAAAGAGAGAAAAAGTCAAAGAAAGAAGCTGATTTGGAGACTTGTTCTGAGGCTAACAGGGTGGCTGGTAAGAAAGCAGAATCTGAATCTGCAGAGACCATCACAAGCACCGAATCAACTAAAAGAAGAGGGAAGCGAAGTGTGGTGGAAATGTATAAGGATACATTCAAAGTGGCCCCTGAAAGCAAGAAATTGGTGTTGACATCTGCTGGCACTAAATGGAGACAATTCAAGACCAAATTAACAACTAAGTATGTGCTGCCATACTTGGGAAAGAAGAAGAAATTGCGAAAGCCACCAAAGCAGTATGCATTTGTTGGGTTGCAGCCATGGAAGGAGTTTGTAAGTCAGAGGAGTACAGAGGCATGGCTGAAACTTCATAATGACCAAAGTCAACGAGTCAAGAAGAGAAAATACCATTATAGATTATCAAGAAAGGGATATATTGGACTAGAGGAGGAATTGAAACATTCTTGGCCTGAAGGAGAGGTTATTGACCGTGCAATTCTATGGAAGAAGGCCCATGTACTTAAAAATGGGGAGATAAGTGAGGAGGTGACACCGATTGCAACAAAGATAGATGAATTGATGGAAAAGAAAAGGAAGGGTGAGCTAGAAATTTCAGGGAGTAGTGATGTATTATCTCAAGCACTAGAAACTCCTGAACATTCGGGTAGGGTAAGGGGTGTTGGAGGCTTCGTAAATCCGTCTACCTACTTTAAGCTTCCAAAGCAGAAAAGGGTGAGAATTACTAAGGCAGAATTACTGGCACGTGATAGAGAGCGTGATCGAGAGCTGGAGGAGACAAAGAAAATAATTCTTCAAAAACAAGCAACGACAGAAGAGCTATTACATAAAAGGATTGCTCAATTAGAAGCATTGATAACAGAAAAGGCAACCTATACACCACATTCCCCTATATCAGATAAGGGCAGTTTCCATGATAAAGAAAAGAAAAGGCTAATTGATCTTGATGTTGACAAGCTGCAAGAAAATGTAGATGATTGCGAGATTGTTCCTCCGCCTACTGATATGGGTGGCACCTGCGAGTTGGCAGTGAATACCATTAGCAATATAGTTGCTTTTGGTACCGTATTCGATGACGCAGATATTAACAAAACAATACATGGAGCTCCATTGAAGGAGGGGTATGTTAGAGTGTCAGTGGATGGTGAGATTCAAGGCGATGCACCACTTCCTTTCCCTATAACGGGTGAGATGGAATTGGTTCGAGAAGCGGTTGGAAGTCACGTGGCTTGGCCTGAGGAGTTTGTTATTCGAAGACAACCGGTGAAGAAAAAGAAAACAAAGATGGATTTCGTCAGATCAATGTTCGATAAAGTTGAGCTAAATCCGTTTGTGCCCAAGCGCTGTAAGTTATTGTACAAACATGCCACAACAATCATGAAACAAACTAAACTCTTCATCTTGACTGAGAATGTGATTGATCTCTTAGAAATGCAAAAGATTGGCCAAGGAGTGATAGCAGCATACATGGCGCAACTACATGAACTTATTATTGAACGAGATGAGTTGGAAACTTTTGGCTTCATTGATCCTGCTGCTACATATAACTGCGAGAGATCGGACTTTAGTTCCTACTTAGTGAATCGGTTGAAAGAGGGAAAGGCTGATCGCATATTCTTTATGCCCTACAATCCGGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_24

Protein Analysis

565

Amino Acids

64.46

Weight (kDa)

9.35

Isoelectric Point (pI)

42.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 120 - 245 9.8e-06 Plant transposase (Ptta/En/Spm family)
DUF8039 PF26133 357 - 435 3.8e-13 Domain of unknown function (DUF8039)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000290)

Species Orthologous Gene IDs
prunus_persica Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0352291 RchiOBHm_Chr1g0352301 RchiOBHm_Chr2g0145261 RchiOBHm_Chr2g0160781 RchiOBHm_Chr2g0160871 RchiOBHm_Chr3g0460901 RchiOBHm_Chr3g0494431 RchiOBHm_Chr3g0494441 RchiOBHm_Chr4g0385451 RchiOBHm_Chr4g0417051 RchiOBHm_Chr4g0424111 RchiOBHm_Chr5g0035911 RchiOBHm_Chr6g0269251 RchiOBHm_Chr6g0274141 RchiOBHm_Chr7g0191841 RchiOBHm_Chr7g0196691 RchiOBHm_Chr7g0211271 RchiOBHm_Chr7g0227321 RchiOBHm_Chr7g0242811
rosa_laevigata RLG00000013212
rosa_multiflora Rmu_co8387591.1_g000001 Rmu_sc0000147.1_g000094 Rmu_sc0000340.1_g000034 Rmu_sc0000546.1_g000048 Rmu_sc0001461.1_g000092 Rmu_sc0001659.1_g000042 Rmu_sc0002460.1_g000027 Rmu_sc0003170.1_g000021 Rmu_sc0004301.1_g000015 Rmu_sc0004344.1_g000009 Rmu_sc0005539.1_g000024 Rmu_sc0006803.1_g000018 Rmu_sc0006888.1_g000057 Rmu_sc0009330.1_g000004 Rmu_sc0010704.1_g000001 Rmu_sc0012787.1_g000002 Rmu_sc0023684.1_g000002 Rmu_ssc0000189.1_g000010
rosa_roxburghii Rroxscaffold_5G00377480 Rroxscaffold_6G00389290 Rroxscaffold_6G00414410 Rroxscaffold_7G00202010
rosa_rugosa Rorug01G0242100 Rorug02G0188500 Rorug02G0273900 Rorug03G0342600 Rorug05G0239000 Rorug07G0163300 Rorug07G0192100
rosa_samantha Rh1BG091000 Rh1BG200300 Rh1DG228100 Rh2AG268900 Rh2AG431600 Rh2AG508400 Rh2CG258700 Rh2CG417500 Rh2CG493900 Rh3AG323800 Rh3BG237800 Rh3CG306700 Rh3DG204700 Rh3DG259400 Rh4AG203100 Rh4AG377200 Rh4BG054300 Rh4BG125100 Rh4BG146000 Rh4BG251900 Rh4DG132500 Rh4DG155000 Rh4DG384000 Rh5BG230700 Rh5CG382700 Rh5CG532300 Rh5DG235600 Rh5DG259700 Rh5DG320000 Rh6AG162900 Rh6CG065400 Rh6CG065500 Rh6CG307600 Rh6CG310500 Rh6CG391900 Rh6DG062500 Rh6DG062600 Rh6DG187500 Rh7BG296200 Rh7DG266900 Rh7DG322300
rosa_wichuraiana Rw2G018510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1079
Acc36I ACCTGC 1 cut(s) 1079
Acc65I GGTACC 1 cut(s) 1115
AccB1I GGYRCC 2 cut(s) 1067, 1115
AccI GTMKAC 1 cut(s) 737
AciI CCGC 2 cut(s) 1049, 1265
AclWI GGATC 1 cut(s) 1577
AcoI YGGCCR 1 cut(s) 1498
AcsI RAATTY 1 cut(s) 645
AcuI CTGAAG 1 cut(s) 528
AcvI CACGTG 2 cut(s) 800, 1279
AfaI GTAC 4 cut(s) 385, 555, 1117, 1412
AfeI AGCGCT 1 cut(s) 1397
AfiI CCNNNNNNNGG 3 cut(s) 296, 1237, 1238
AgeI ACCGGT 1 cut(s) 1315
AgsI TTSAA 8 cut(s) 196, 259, 493, 851, 1168, 1208, 1550, 1645
AluBI AGCT 8 cut(s) 56, 640, 751, 823, 874, 1012, 1160, 1375
AluI AGCT 8 cut(s) 56, 640, 751, 823, 874, 1012, 1160, 1375
Alw21I GWGCWC 1 cut(s) 1162
Alw26I GTCTC 4 cut(s) 59, 116, 244, 824
AlwI GGATC 1 cut(s) 1577
AlwNI CAGNNNCTG 1 cut(s) 110
Aor51HI AGCGCT 1 cut(s) 1397
AoxI GGCC 5 cut(s) 201, 503, 546, 1286, 1498
ApeKI GCWGC 5 cut(s) 286, 352, 1012, 1514, 1589
ApoI RAATTY 1 cut(s) 645
AsiGI ACCGGT 1 cut(s) 1315
Asp700I GAANNNNTTC 1 cut(s) 1254
Asp718I GGTACC 1 cut(s) 1115
AspLEI GCGC 2 cut(s) 1398, 1528
AspS9I GGNCC 2 cut(s) 202, 547
AsuC2I CCSGG 1 cut(s) 1689
AsuHPI GGTGA 6 cut(s) 595, 647, 781, 1211, 1253, 1330
AsuII TTCGAA 1 cut(s) 1306
AxyI CCTNAGG 1 cut(s) 1290
BaeGI GKGCMC 1 cut(s) 1392
BalI TGGCCA 1 cut(s) 1500
BanI GGYRCC 2 cut(s) 1067, 1115
BanII GRGCYC 1 cut(s) 1162
BarI GAAGNNNNNNTAC 4 cut(s) 425, 457, 861, 893
BbrPI CACGTG 2 cut(s) 800, 1279
BbsI GAAGAC 1 cut(s) 1315
Bbv12I GWGCWC 1 cut(s) 1162
BbvI GCAGC 5 cut(s) 273, 364, 999, 1526, 1576
BccI CCATC 5 cut(s) 134, 610, 1190, 1240, 1333
BciVI GTATCC 1 cut(s) 181
BcnI CCSGG 1 cut(s) 1689
BcoDI GTCTC 4 cut(s) 59, 116, 244, 824
BfaI CTAG 3 cut(s) 479, 641, 680
BfmI CTRYAG 1 cut(s) 117
BfoI RGCGCY 1 cut(s) 1399
BfuAI ACCTGC 1 cut(s) 1079
BfuI GTATCC 1 cut(s) 181
BisI GCNGC 5 cut(s) 287, 353, 1013, 1515, 1590
BlsI GCNGC 5 cut(s) 288, 354, 1014, 1516, 1591
Bme1390I CCNGG 1 cut(s) 1689
BmgT120I GGNCC 2 cut(s) 202, 547
BmiI GGNNCC 4 cut(s) 7, 204, 1069, 1117
BmrFI CCNGG 1 cut(s) 1689
BmsI GCATC 1 cut(s) 1204
BoxI GACNNNNGTC 1 cut(s) 417
BpiI GAAGAC 1 cut(s) 1315
BpmI CTGGAG 1 cut(s) 845
Bpu14I TTCGAA 1 cut(s) 1306
BpuEI CTTGAG 1 cut(s) 657
BpuMI CCSGG 1 cut(s) 1689
BsaAI YACGTR 2 cut(s) 800, 1279
BsaI GGTCTC 1 cut(s) 116
BsaJI CCNNGG 3 cut(s) 356, 1501, 1688
BsaWI WCCGGW 1 cut(s) 1315
BsaXI ACNNNNNCTCC 2 cut(s) 711, 741
Bsc4I CCNNNNNNNGG 3 cut(s) 296, 1237, 1238
Bse118I RCCGGY 1 cut(s) 1315
Bse1I ACTGG 1 cut(s) 798
Bse21I CCTNAGG 1 cut(s) 1290
BseDI CCNNGG 3 cut(s) 356, 1501, 1688
BseGI GGATG 1 cut(s) 1201
BseLI CCNNNNNNNGG 3 cut(s) 296, 1237, 1238
BseMII CTCAG 3 cut(s) 66, 1281, 1452
BseNI ACTGG 1 cut(s) 798
BseRI GAGGAG 5 cut(s) 394, 497, 593, 842, 1307
BseSI GKGCMC 1 cut(s) 1392
BseXI GCAGC 5 cut(s) 273, 364, 999, 1526, 1576
BshFI GGCC 5 cut(s) 203, 505, 548, 1288, 1500
BshNI GGYRCC 2 cut(s) 1067, 1115
BshTI ACCGGT 1 cut(s) 1315
BsiHKAI GWGCWC 1 cut(s) 1162
BsiSI CCGG 2 cut(s) 1316, 1688
BslI CCNNNNNNNGG 3 cut(s) 296, 1237, 1238
BsmAI GTCTC 4 cut(s) 59, 116, 244, 824
BsnI GGCC 5 cut(s) 203, 505, 548, 1288, 1500
Bso31I GGTCTC 1 cut(s) 116
Bsp119I TTCGAA 1 cut(s) 1306
Bsp1286I GDGCHC 2 cut(s) 1162, 1392
Bsp1407I TGTACA 1 cut(s) 1410
Bsp143I GATC 7 cut(s) 814, 994, 1352, 1474, 1582, 1610, 1660
Bsp19I CCATGG 1 cut(s) 356
BspACI CCGC 2 cut(s) 1049, 1265
BspANI GGCC 5 cut(s) 203, 505, 548, 1288, 1500
BspCNI CTCAG 3 cut(s) 67, 1282, 1453
BspHI TCATGA 1 cut(s) 1431
BspLI GGNNCC 4 cut(s) 7, 204, 1069, 1117
BspMAI CTGCAG 1 cut(s) 121
BspMI ACCTGC 1 cut(s) 1079
BspPI GGATC 1 cut(s) 1577
BspQI GCTCTTC 1 cut(s) 864
BspT104I TTCGAA 1 cut(s) 1306
BspT107I GGYRCC 2 cut(s) 1067, 1115
BspTNI GGTCTC 1 cut(s) 116
BsrFI RCCGGY 1 cut(s) 1315
BsrGI TGTACA 1 cut(s) 1410
BsrI ACTGG 1 cut(s) 798
BssAI RCCGGY 1 cut(s) 1315
BssECI CCNNGG 3 cut(s) 356, 1501, 1688
BssMI GATC 7 cut(s) 814, 994, 1352, 1474, 1582, 1610, 1660
BssT1I CCWWGG 2 cut(s) 356, 1501
Bst4CI ACNGT 2 cut(s) 527, 1120
Bst6I CTCTTC 4 cut(s) 148, 428, 864, 1454
BstAUI TGTACA 1 cut(s) 1410
BstBAI YACGTR 2 cut(s) 800, 1279
BstBI TTCGAA 1 cut(s) 1306
BstC8I GCNNGC 1 cut(s) 238
BstDEI CTNAG 7 cut(s) 75, 276, 780, 1290, 1461, 1480, 1630
BstDSI CCRYGG 1 cut(s) 356
BstF5I GGATG 1 cut(s) 1201
BstH2I RGCGCY 1 cut(s) 1399
BstHHI GCGC 2 cut(s) 1398, 1528
BstKTI GATC 7 cut(s) 817, 997, 1355, 1477, 1585, 1613, 1663
BstMAI GTCTC 4 cut(s) 59, 116, 244, 824
BstMBI GATC 7 cut(s) 814, 994, 1352, 1474, 1582, 1610, 1660
BstMWI GCNNNNNNNGC 3 cut(s) 328, 757, 1523
BstNSI RCATGY 1 cut(s) 1421
BstPAI GACNNNNGTC 1 cut(s) 417
BstSCI CCNGG 1 cut(s) 1687
BstSFI CTRYAG 1 cut(s) 117
BstSLI GKGCMC 1 cut(s) 1392
BstV1I GCAGC 5 cut(s) 273, 364, 999, 1526, 1576
BstV2I GAAGAC 1 cut(s) 1315
Bsu36I CCTNAGG 1 cut(s) 1290
BsuI GTATCC 1 cut(s) 181
BsuRI GGCC 5 cut(s) 203, 505, 548, 1288, 1500
BtgI CCRYGG 1 cut(s) 356
BtgZI GCGATG 1 cut(s) 1227
BtsCI GGATG 1 cut(s) 1201
BtsI GCAGTG 1 cut(s) 1089
BtsIMutI CAGTG 2 cut(s) 1089, 1197
BveI ACCTGC 1 cut(s) 1079
Cac8I GCNNGC 1 cut(s) 238
CaiI CAGNNNCTG 1 cut(s) 110
CciI TCATGA 1 cut(s) 1431
CfoI GCGC 2 cut(s) 1398, 1528
Cfr10I RCCGGY 1 cut(s) 1315
Cfr13I GGNCC 2 cut(s) 202, 547
CseI GACGC 1 cut(s) 1139
Csp6I GTAC 4 cut(s) 384, 554, 1116, 1411
CspAI ACCGGT 1 cut(s) 1315
CviAII CATG 9 cut(s) 357, 393, 551, 968, 1154, 1418, 1432, 1522, 1535
CviQI GTAC 4 cut(s) 384, 554, 1116, 1411
DdeI CTNAG 7 cut(s) 75, 276, 780, 1290, 1461, 1480, 1630
DpnI GATC 7 cut(s) 816, 996, 1354, 1476, 1584, 1612, 1662
DpnII GATC 7 cut(s) 814, 994, 1352, 1474, 1582, 1610, 1660
EaeI YGGCCR 1 cut(s) 1498
Eam1104I CTCTTC 4 cut(s) 148, 428, 864, 1454
EarI CTCTTC 4 cut(s) 148, 428, 864, 1454
EciI GGCGGA 1 cut(s) 1038
Ecl136II GAGCTC 1 cut(s) 1160
Eco130I CCWWGG 2 cut(s) 356, 1501
Eco24I GRGCYC 1 cut(s) 1162
Eco31I GGTCTC 1 cut(s) 116
Eco47III AGCGCT 1 cut(s) 1397
Eco53kI GAGCTC 1 cut(s) 1160
Eco57I CTGAAG 1 cut(s) 528
Eco72I CACGTG 2 cut(s) 800, 1279
Eco81I CCTNAGG 1 cut(s) 1290
EcoICRI GAGCTC 1 cut(s) 1160
EcoT14I CCWWGG 2 cut(s) 356, 1501
EcoT22I ATGCAT 1 cut(s) 340
EcoT38I GRGCYC 1 cut(s) 1162
ErhI CCWWGG 2 cut(s) 356, 1501
FaeI CATG 9 cut(s) 360, 396, 554, 971, 1157, 1421, 1435, 1525, 1538
FatI CATG 9 cut(s) 356, 392, 550, 967, 1153, 1417, 1431, 1521, 1534
FblI GTMKAC 1 cut(s) 737
Fnu4HI GCNGC 5 cut(s) 287, 353, 1013, 1515, 1590
FokI GGATG 1 cut(s) 1208
FriOI GRGCYC 1 cut(s) 1162
Fsp4HI GCNGC 5 cut(s) 287, 353, 1013, 1515, 1590
FspBI CTAG 3 cut(s) 479, 641, 680
GlaI GCGC 2 cut(s) 1397, 1527
GluI GCNGC 5 cut(s) 287, 353, 1013, 1515, 1590
GsuI CTGGAG 1 cut(s) 845
HaeII RGCGCY 1 cut(s) 1399
HaeIII GGCC 5 cut(s) 203, 505, 548, 1288, 1500
HapII CCGG 2 cut(s) 1316, 1688
HgaI GACGC 1 cut(s) 1139
HhaI GCGC 2 cut(s) 1398, 1528
Hin1II CATG 9 cut(s) 360, 396, 554, 971, 1157, 1421, 1435, 1525, 1538
Hin6I GCGC 2 cut(s) 1396, 1526
HinP1I GCGC 2 cut(s) 1396, 1526
HincII GTYRAC 3 cut(s) 228, 422, 1006
HindII GTYRAC 3 cut(s) 228, 422, 1006
HindIII AAGCTT 1 cut(s) 749
HinfI GANTC 6 cut(s) 107, 113, 140, 426, 1204, 1636
HpaII CCGG 2 cut(s) 1316, 1688
HphI GGTGA 6 cut(s) 595, 647, 781, 1211, 1253, 1330
Hpy166II GTNNAC 4 cut(s) 228, 422, 738, 1006
Hpy188I TCNGA 6 cut(s) 76, 112, 378, 952, 1352, 1615
Hpy188III TCNNGA 9 cut(s) 259, 430, 459, 689, 818, 998, 1259, 1432, 1456
Hpy8I GTNNAC 4 cut(s) 228, 422, 738, 1006
HpyAV CCTTC 6 cut(s) 10, 355, 503, 538, 625, 1162
HpyCH4III ACNGT 2 cut(s) 527, 1120
HpyCH4IV ACGT 2 cut(s) 799, 1278
HpyCH4V TGCA 8 cut(s) 119, 338, 352, 530, 596, 1015, 1217, 1489
HpyF10VI GCNNNNNNNGC 3 cut(s) 328, 757, 1523
HpyF3I CTNAG 7 cut(s) 75, 276, 780, 1290, 1461, 1480, 1630
HpySE526I ACGT 2 cut(s) 799, 1278
Hsp92II CATG 9 cut(s) 360, 396, 554, 971, 1157, 1421, 1435, 1525, 1538
HspAI GCGC 2 cut(s) 1396, 1526
KpnI GGTACC 1 cut(s) 1119
Kzo9I GATC 7 cut(s) 814, 994, 1352, 1474, 1582, 1610, 1660
LguI GCTCTTC 1 cut(s) 864
LmnI GCTCC 2 cut(s) 1157, 1165
Lsp1109I GCAGC 5 cut(s) 273, 364, 999, 1526, 1576
LweI GCATC 1 cut(s) 1204
MaeI CTAG 3 cut(s) 479, 641, 680
MaeII ACGT 2 cut(s) 799, 1278
MaeIII GTNAC 2 cut(s) 583, 1274
MalI GATC 7 cut(s) 816, 996, 1354, 1476, 1584, 1612, 1662
MboI GATC 7 cut(s) 814, 994, 1352, 1474, 1582, 1610, 1660
MhlI GDGCHC 2 cut(s) 1162, 1392
MlsI TGGCCA 1 cut(s) 1500
MluNI TGGCCA 1 cut(s) 1500
MlyI GAGTC 1 cut(s) 435
MmeI TCCRAC 3 cut(s) 697, 1249, 1542
Mox20I TGGCCA 1 cut(s) 1500
Mph1103I ATGCAT 1 cut(s) 340
MroXI GAANNNNTTC 1 cut(s) 1254
MscI TGGCCA 1 cut(s) 1500
MseI TTAA 4 cut(s) 269, 558, 747, 1140
Msp20I TGGCCA 1 cut(s) 1500
MspI CCGG 2 cut(s) 1316, 1688
MspR9I CCNGG 1 cut(s) 1689
MwoI GCNNNNNNNGC 3 cut(s) 328, 757, 1523
NciI CCSGG 1 cut(s) 1689
NcoI CCATGG 1 cut(s) 356
NdeII GATC 7 cut(s) 814, 994, 1352, 1474, 1582, 1610, 1660
NlaIII CATG 9 cut(s) 360, 396, 554, 971, 1157, 1421, 1435, 1525, 1538
NlaIV GGNNCC 4 cut(s) 7, 204, 1069, 1117
NmuCI GTSAC 2 cut(s) 583, 1274
NsiI ATGCAT 1 cut(s) 340
NspI RCATGY 1 cut(s) 1421
NspV TTCGAA 1 cut(s) 1306
PagI TCATGA 1 cut(s) 1431
PaqCI CACCTGC 1 cut(s) 1079
PciSI GCTCTTC 1 cut(s) 864
PdmI GAANNNNTTC 1 cut(s) 1254
PfeI GAWTC 5 cut(s) 107, 113, 140, 1204, 1636
PinAI ACCGGT 1 cut(s) 1315
PkrI GCNGC 5 cut(s) 288, 354, 1014, 1516, 1591
PleI GAGTC 1 cut(s) 434
PmaCI CACGTG 2 cut(s) 800, 1279
PmlI CACGTG 2 cut(s) 800, 1279
PpsI GAGTC 1 cut(s) 434
Ppu21I YACGTR 2 cut(s) 800, 1279
PshAI GACNNNNGTC 1 cut(s) 417
Psp124BI GAGCTC 1 cut(s) 1162
PspCI CACGTG 2 cut(s) 800, 1279
PspN4I GGNNCC 4 cut(s) 7, 204, 1069, 1117
PspPI GGNCC 2 cut(s) 202, 547
PstI CTGCAG 1 cut(s) 121
PstNI CAGNNNCTG 1 cut(s) 110
RsaI GTAC 4 cut(s) 385, 555, 1117, 1412
RsaNI GTAC 4 cut(s) 384, 554, 1116, 1411
SacI GAGCTC 1 cut(s) 1162
SapI GCTCTTC 1 cut(s) 864
SaqAI TTAA 4 cut(s) 269, 558, 747, 1140
SatI GCNGC 5 cut(s) 287, 353, 1013, 1515, 1590
Sau3AI GATC 7 cut(s) 814, 994, 1352, 1474, 1582, 1610, 1660
Sau96I GGNCC 2 cut(s) 202, 547
SchI GAGTC 1 cut(s) 435
ScrFI CCNGG 1 cut(s) 1689
SduI GDGCHC 2 cut(s) 1162, 1392
SfaNI GCATC 1 cut(s) 1204
SfcI CTRYAG 1 cut(s) 117
SfuI TTCGAA 1 cut(s) 1306
SmlI CTYRAG 1 cut(s) 672
SmoI CTYRAG 1 cut(s) 672
SsiI CCGC 2 cut(s) 1049, 1265
SspMI CTAG 3 cut(s) 479, 641, 680
SstI GAGCTC 1 cut(s) 1162
StyD4I CCNGG 1 cut(s) 1687
StyI CCWWGG 2 cut(s) 356, 1501
TaaI ACNGT 2 cut(s) 527, 1120
TaiI ACGT 2 cut(s) 802, 1281
TaqI TCGA 5 cut(s) 817, 1125, 1258, 1306, 1362
TatI WGTACW 3 cut(s) 383, 553, 1410
TfiI GAWTC 5 cut(s) 107, 113, 140, 1204, 1636
Tru1I TTAA 4 cut(s) 269, 558, 747, 1140
Tru9I TTAA 4 cut(s) 269, 558, 747, 1140
TscAI CASTG 2 cut(s) 1089, 1197
TseFI GTSAC 2 cut(s) 583, 1274
TseI GCWGC 5 cut(s) 286, 352, 1012, 1514, 1589
Tsp45I GTSAC 2 cut(s) 583, 1274
TspDTI ATGAA 6 cut(s) 395, 624, 1441, 1448, 1551, 1567
TspGWI ACGGA 2 cut(s) 723, 1371
TspRI CASTG 2 cut(s) 1089, 1197
XapI RAATTY 1 cut(s) 645
XceI RCATGY 1 cut(s) 1421
XmiI GTMKAC 1 cut(s) 737
XmnI GAANNNNTTC 1 cut(s) 1254
XspI CTAG 3 cut(s) 479, 641, 680
Zsp2I ATGCAT 1 cut(s) 340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.