Rh4DG384000

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0000290
Physical Location & Seq
Forward (+)
60123584 .. 60151482
27899 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG384000.1

Sequence Viewer

Length: 1215 bp
ATGTCGAAGAAACCTTCGTCTTCCGAAGCACGCCCTCATCGGGAAATCCTTGAACGGCTGTCTGATTCTCCAGACTCCGACGAGGAGACTCAGATCGGAGCACCCTGTCGCCCTAGACAGGTCGCTCGCCCCGGCGTTGCTGTTTCTTGCGCTCGGATAGGAGTTTCTCGCCCTCCGACCGGCGGTTCTTGCGCACATGCCGACGGTTCTTTTCACCTCAAGCCTGTTGGGGGATCTCCTCCCGCAGCACCTGCTGGATCTCCTCCCCCCGCCCCTGCCGGATCTCCACCACCCTCTCTGGCCGCAGGGGCACCACTCGCTTGGGCCGCAGGGACGCCCTCAGATTCAGTTGGTGTTCCTAAGGGTCCATCTAAGCTCTCTGGCCCACTTTCGGGTGCGAAGCTGAAGTCAGTAGATGAAGAAGTCAGAGACCAGGCACATCTTCATGTGTTGTTCAATAATGCTGAGGTGGATCCATATAGAAACGCACATAAGGAGATTGTGGAGCAGCTTTGGGGAGGGAAGAAGAAGAGCAAAAAGTGGCTACAAAGTGAGCACAATCGTACCTTTGCCGATTGGTTTCAATCCAAGGTAGCAATGGGTTCCAAGAAGGGAATTCGAAAGTCACGAAGAGGCAAAAAATTAAAGAGAAAAGCTGATCTGGAGACTTCTCAACCTGAGACTGCTGAAGTGCTTGAAGAAAAAGAAGAATCTGTATCAGCTGACACTATCACGAGCACCGAATCAGTCAAAACCAGAGGGAAGCATAATGTGGTAGCACTGTACAAGGTCTTGGTCAAGAAAGCTTTGGGAAAAAAGTTTAAAGTATCATACACCGAGACGGGCAATCCAAATGGAAGAATAAGACACACTCTACAGTTTTACATAGGAATGTTGGCGCGGACCAAGGTGCCCATCAATATTGTAAGCTGGCCCGAAGTGGATGGTGACTTGAAGGATAAACTTTGGCTCGATGTTCAGAGAAAGACTTTGCCCAAAGGAGAGGTCACTGATCGTGCAATTATGTGGAAGAAAGCCCGTCAACGAAAAGATGGGGACATAGATGAGGAGGCTAGAGCTGTGGCCACAAAGATAGGAAGCAAAGCGGAATTAGTAACAGATTTACGCAAGTTGTTTGTTGTTGAAAAGATCTTTTGGGCTCAACGTGCAAGGGTAAACGGCCTTAACATCGAAAATGCTTCACATGCAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_24

Protein Analysis

404

Amino Acids

44.0

Weight (kDa)

9.82

Isoelectric Point (pI)

44.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000290)

Species Orthologous Gene IDs
prunus_persica Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0352291 RchiOBHm_Chr1g0352301 RchiOBHm_Chr2g0145261 RchiOBHm_Chr2g0160781 RchiOBHm_Chr2g0160871 RchiOBHm_Chr3g0460901 RchiOBHm_Chr3g0494431 RchiOBHm_Chr3g0494441 RchiOBHm_Chr4g0385451 RchiOBHm_Chr4g0417051 RchiOBHm_Chr4g0424111 RchiOBHm_Chr5g0035911 RchiOBHm_Chr6g0269251 RchiOBHm_Chr6g0274141 RchiOBHm_Chr7g0191841 RchiOBHm_Chr7g0196691 RchiOBHm_Chr7g0211271 RchiOBHm_Chr7g0227321 RchiOBHm_Chr7g0242811
rosa_laevigata RLG00000013212
rosa_multiflora Rmu_co8387591.1_g000001 Rmu_sc0000147.1_g000094 Rmu_sc0000340.1_g000034 Rmu_sc0000546.1_g000048 Rmu_sc0001461.1_g000092 Rmu_sc0001659.1_g000042 Rmu_sc0002460.1_g000027 Rmu_sc0003170.1_g000021 Rmu_sc0004301.1_g000015 Rmu_sc0004344.1_g000009 Rmu_sc0005539.1_g000024 Rmu_sc0006803.1_g000018 Rmu_sc0006888.1_g000057 Rmu_sc0009330.1_g000004 Rmu_sc0010704.1_g000001 Rmu_sc0012787.1_g000002 Rmu_sc0023684.1_g000002 Rmu_ssc0000189.1_g000010
rosa_roxburghii Rroxscaffold_5G00377480 Rroxscaffold_6G00389290 Rroxscaffold_6G00414410 Rroxscaffold_7G00202010
rosa_rugosa Rorug01G0242100 Rorug02G0188500 Rorug02G0273900 Rorug03G0342600 Rorug05G0239000 Rorug07G0163300 Rorug07G0192100
rosa_samantha Rh1BG091000 Rh1BG200300 Rh1DG228100 Rh2AG268900 Rh2AG431600 Rh2AG508400 Rh2CG258700 Rh2CG417500 Rh2CG493900 Rh3AG323800 Rh3BG237800 Rh3CG306700 Rh3DG204700 Rh3DG259400 Rh4AG203100 Rh4AG377200 Rh4BG054300 Rh4BG125100 Rh4BG146000 Rh4BG251900 Rh4DG132500 Rh4DG155000 Rh4DG384000 Rh5BG230700 Rh5CG382700 Rh5CG532300 Rh5DG235600 Rh5DG259700 Rh5DG320000 Rh6AG162900 Rh6CG065400 Rh6CG065500 Rh6CG307600 Rh6CG310500 Rh6CG391900 Rh6DG062500 Rh6DG062600 Rh6DG187500 Rh7BG296200 Rh7DG266900 Rh7DG322300
rosa_wichuraiana Rw2G018510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 259
Acc16I TGCGCA 1 cut(s) 193
Acc36I ACCTGC 1 cut(s) 259
AccB1I GGYRCC 2 cut(s) 310, 910
AccII CGCG 1 cut(s) 901
AciI CCGC 7 cut(s) 183, 243, 270, 303, 327, 901, 1106
AclWI GGATC 5 cut(s) 241, 265, 289, 467, 480
AcoI YGGCCR 2 cut(s) 300, 1083
AcsI RAATTY 1 cut(s) 615
AcuI CTGAAG 2 cut(s) 425, 708
AcyI GRCGYC 1 cut(s) 335
AfaI GTAC 2 cut(s) 565, 785
AfiI CCNNNNNNNGG 7 cut(s) 40, 118, 179, 182, 230, 391, 392
AgsI TTSAA 6 cut(s) 53, 457, 584, 698, 955, 1145
AjnI CCWGG 1 cut(s) 432
AluBI AGCT 8 cut(s) 376, 403, 511, 656, 722, 806, 930, 1079
AluI AGCT 8 cut(s) 376, 403, 511, 656, 722, 806, 930, 1079
Alw21I GWGCWC 3 cut(s) 103, 558, 740
Alw26I GTCTC 5 cut(s) 80, 423, 659, 674, 833
AlwI GGATC 5 cut(s) 241, 265, 289, 467, 480
AlwNI CAGNNNCTG 1 cut(s) 251
AoxI GGCC 6 cut(s) 300, 324, 382, 932, 1083, 1180
ApeKI GCWGC 3 cut(s) 245, 508, 1208
ApoI RAATTY 1 cut(s) 615
ArsI GACNNNNNNTTYG 4 cut(s) 392, 424, 990, 1022
AspLEI GCGC 3 cut(s) 152, 194, 901
AspS9I GGNCC 5 cut(s) 324, 365, 383, 903, 933
AsuC2I CCSGG 1 cut(s) 132
AsuHPI GGTGA 2 cut(s) 206, 959
AsuII TTCGAA 1 cut(s) 619
AvaII GGWCC 2 cut(s) 365, 903
AxyI CCTNAGG 1 cut(s) 360
BaeGI GKGCMC 2 cut(s) 313, 915
BaeI ACNNNNGTAYC 2 cut(s) 547, 580
BalI TGGCCA 1 cut(s) 1085
BamHI GGATCC 1 cut(s) 472
BanI GGYRCC 2 cut(s) 310, 910
BanII GRGCYC 1 cut(s) 1162
BauI CACGAG 1 cut(s) 733
BbsI GAAGAC 1 cut(s) 12
Bbv12I GWGCWC 3 cut(s) 103, 558, 740
BbvCI CCTCAGC 1 cut(s) 465
BbvI GCAGC 2 cut(s) 257, 520
BccI CCATC 4 cut(s) 376, 923, 938, 1046
BceAI ACGGC 2 cut(s) 71, 1195
BciT130I CCWGG 1 cut(s) 434
BcnI CCSGG 1 cut(s) 132
BcoDI GTCTC 5 cut(s) 80, 423, 659, 674, 833
BfaI CTAG 2 cut(s) 114, 1074
BfmI CTRYAG 1 cut(s) 875
BfuAI ACCTGC 1 cut(s) 259
BglI GCCNNNNNGGC 1 cut(s) 308
BglII AGATCT 1 cut(s) 1149
BisI GCNGC 5 cut(s) 246, 303, 327, 509, 1209
BlsI GCNGC 5 cut(s) 247, 304, 328, 510, 1210
Bme1390I CCNGG 2 cut(s) 132, 434
Bme18I GGWCC 2 cut(s) 365, 903
BmgT120I GGNCC 5 cut(s) 324, 365, 383, 903, 933
BmiI GGNNCC 5 cut(s) 312, 366, 474, 604, 912
BmrFI CCNGG 2 cut(s) 132, 434
BpiI GAAGAC 1 cut(s) 12
BpmI CTGGAG 2 cut(s) 54, 683
Bpu10I CCTNAGC 1 cut(s) 465
Bpu14I TTCGAA 1 cut(s) 619
BpuEI CTTGAG 1 cut(s) 203
BpuMI CCSGG 1 cut(s) 132
BsaHI GRCGYC 1 cut(s) 335
BsaI GGTCTC 1 cut(s) 423
BsaJI CCNNGG 3 cut(s) 130, 588, 906
Bsc4I CCNNNNNNNGG 7 cut(s) 40, 118, 179, 182, 230, 391, 392
Bse118I RCCGGY 1 cut(s) 179
Bse21I CCTNAGG 1 cut(s) 360
Bse3DI GCAATG 1 cut(s) 603
BseBI CCWGG 1 cut(s) 434
BseDI CCNNGG 3 cut(s) 130, 588, 906
BseGI GGATG 1 cut(s) 949
BseLI CCNNNNNNNGG 7 cut(s) 40, 118, 179, 182, 230, 391, 392
BseMI GCAATG 1 cut(s) 603
BseMII CTCAG 4 cut(s) 104, 354, 456, 669
BseRI GAGGAG 4 cut(s) 98, 228, 252, 1082
BseSI GKGCMC 2 cut(s) 313, 915
BseXI GCAGC 2 cut(s) 257, 520
Bsh1236I CGCG 1 cut(s) 901
Bsh1285I CGRYCG 1 cut(s) 180
BshFI GGCC 6 cut(s) 302, 326, 384, 934, 1085, 1182
BshNI GGYRCC 2 cut(s) 310, 910
BsiEI CGRYCG 1 cut(s) 180
BsiHKAI GWGCWC 3 cut(s) 103, 558, 740
BsiSI CCGG 3 cut(s) 132, 180, 279
BslFI GGGAC 2 cut(s) 346, 1070
BslI CCNNNNNNNGG 7 cut(s) 40, 118, 179, 182, 230, 391, 392
BsmAI GTCTC 5 cut(s) 80, 423, 659, 674, 833
BsmBI CGTCTC 1 cut(s) 833
BsmFI GGGAC 2 cut(s) 346, 1070
BsnI GGCC 6 cut(s) 302, 326, 384, 934, 1085, 1182
Bso31I GGTCTC 1 cut(s) 423
Bsp119I TTCGAA 1 cut(s) 619
Bsp1286I GDGCHC 6 cut(s) 103, 313, 558, 740, 915, 1162
Bsp1407I TGTACA 1 cut(s) 783
Bsp143I GATC 8 cut(s) 93, 233, 257, 281, 472, 658, 1012, 1149
BspACI CCGC 7 cut(s) 183, 243, 270, 303, 327, 901, 1106
BspANI GGCC 6 cut(s) 302, 326, 384, 934, 1085, 1182
BspCNI CTCAG 4 cut(s) 103, 353, 457, 670
BspFNI CGCG 1 cut(s) 901
BspLI GGNNCC 5 cut(s) 312, 366, 474, 604, 912
BspMI ACCTGC 1 cut(s) 259
BspPI GGATC 5 cut(s) 241, 265, 289, 467, 480
BspQI GCTCTTC 1 cut(s) 524
BspT104I TTCGAA 1 cut(s) 619
BspT107I GGYRCC 2 cut(s) 310, 910
BspTNI GGTCTC 1 cut(s) 423
BsrDI GCAATG 1 cut(s) 603
BsrFI RCCGGY 1 cut(s) 179
BsrGI TGTACA 1 cut(s) 783
BssAI RCCGGY 1 cut(s) 179
BssECI CCNNGG 3 cut(s) 130, 588, 906
BssMI GATC 8 cut(s) 93, 233, 257, 281, 472, 658, 1012, 1149
BssNI GRCGYC 1 cut(s) 335
BssSI CACGAG 1 cut(s) 733
BssT1I CCWWGG 2 cut(s) 588, 906
Bst2BI CACGAG 1 cut(s) 733
Bst2UI CCWGG 1 cut(s) 434
Bst4CI ACNGT 3 cut(s) 206, 783, 879
Bst6I CTCTTC 2 cut(s) 524, 625
BstACI GRCGYC 1 cut(s) 335
BstAPI GCANNNNNTGC 1 cut(s) 251
BstAUI TGTACA 1 cut(s) 783
BstBI TTCGAA 1 cut(s) 619
BstC8I GCNNGC 3 cut(s) 31, 127, 932
BstDEI CTNAG 6 cut(s) 90, 340, 360, 372, 465, 678
BstF5I GGATG 1 cut(s) 949
BstFNI CGCG 1 cut(s) 901
BstHHI GCGC 3 cut(s) 152, 194, 901
BstKTI GATC 8 cut(s) 96, 236, 260, 284, 475, 661, 1015, 1152
BstMAI GTCTC 5 cut(s) 80, 423, 659, 674, 833
BstMBI GATC 8 cut(s) 93, 233, 257, 281, 472, 658, 1012, 1149
BstMCI CGRYCG 1 cut(s) 180
BstMWI GCNNNNNNNGC 7 cut(s) 189, 251, 308, 317, 326, 1166, 1205
BstNI CCWGG 1 cut(s) 434
BstNSI RCATGY 2 cut(s) 200, 1208
BstSCI CCNGG 2 cut(s) 130, 432
BstSFI CTRYAG 1 cut(s) 875
BstSLI GKGCMC 2 cut(s) 313, 915
BstUI CGCG 1 cut(s) 901
BstV1I GCAGC 2 cut(s) 257, 520
BstV2I GAAGAC 1 cut(s) 12
BstX2I RGATCY 5 cut(s) 233, 257, 281, 472, 1149
BstXI CCANNNNNNTGG 1 cut(s) 321
BstYI RGATCY 5 cut(s) 233, 257, 281, 472, 1149
Bsu36I CCTNAGG 1 cut(s) 360
BsuRI GGCC 6 cut(s) 302, 326, 384, 934, 1085, 1182
BtsCI GGATG 1 cut(s) 949
BtsIMutI CAGTG 2 cut(s) 779, 1008
BveI ACCTGC 1 cut(s) 259
Cac8I GCNNGC 3 cut(s) 31, 127, 932
CaiI CAGNNNCTG 1 cut(s) 251
CfoI GCGC 3 cut(s) 152, 194, 901
Cfr10I RCCGGY 1 cut(s) 179
Cfr13I GGNCC 5 cut(s) 324, 365, 383, 903, 933
CseI GACGC 1 cut(s) 343
Csp6I GTAC 2 cut(s) 564, 784
CviAII CATG 3 cut(s) 197, 446, 1205
CviQI GTAC 2 cut(s) 564, 784
DdeI CTNAG 6 cut(s) 90, 340, 360, 372, 465, 678
DpnI GATC 8 cut(s) 95, 235, 259, 283, 474, 660, 1014, 1151
DpnII GATC 8 cut(s) 93, 233, 257, 281, 472, 658, 1012, 1149
DraI TTTAAA 1 cut(s) 823
EaeI YGGCCR 2 cut(s) 300, 1083
Eam1104I CTCTTC 2 cut(s) 524, 625
EarI CTCTTC 2 cut(s) 524, 625
Eco130I CCWWGG 2 cut(s) 588, 906
Eco24I GRGCYC 1 cut(s) 1162
Eco31I GGTCTC 1 cut(s) 423
Eco47I GGWCC 2 cut(s) 365, 903
Eco57I CTGAAG 2 cut(s) 425, 708
Eco81I CCTNAGG 1 cut(s) 360
EcoRI GAATTC 1 cut(s) 615
EcoRII CCWGG 1 cut(s) 432
EcoT14I CCWWGG 2 cut(s) 588, 906
EcoT38I GRGCYC 1 cut(s) 1162
ErhI CCWWGG 2 cut(s) 588, 906
Esp3I CGTCTC 1 cut(s) 833
FaeI CATG 3 cut(s) 200, 449, 1208
FaqI GGGAC 2 cut(s) 346, 1070
FatI CATG 3 cut(s) 196, 445, 1204
FauI CCCGC 2 cut(s) 250, 277
Fnu4HI GCNGC 5 cut(s) 246, 303, 327, 509, 1209
FokI GGATG 1 cut(s) 956
FriOI GRGCYC 1 cut(s) 1162
Fsp4HI GCNGC 5 cut(s) 246, 303, 327, 509, 1209
FspBI CTAG 2 cut(s) 114, 1074
FspI TGCGCA 1 cut(s) 193
GlaI GCGC 3 cut(s) 151, 193, 900
GluI GCNGC 5 cut(s) 246, 303, 327, 509, 1209
GsuI CTGGAG 2 cut(s) 54, 683
HaeIII GGCC 6 cut(s) 302, 326, 384, 934, 1085, 1182
HapII CCGG 3 cut(s) 132, 180, 279
HgaI GACGC 1 cut(s) 343
HhaI GCGC 3 cut(s) 152, 194, 901
Hin1I GRCGYC 1 cut(s) 335
Hin1II CATG 3 cut(s) 200, 449, 1208
Hin6I GCGC 3 cut(s) 150, 192, 899
HinP1I GCGC 3 cut(s) 150, 192, 899
HincII GTYRAC 1 cut(s) 1043
HindII GTYRAC 1 cut(s) 1043
HindIII AAGCTT 1 cut(s) 804
HinfI GANTC 6 cut(s) 65, 74, 88, 344, 710, 743
HpaII CCGG 3 cut(s) 132, 180, 279
HphI GGTGA 2 cut(s) 206, 959
Hpy166II GTNNAC 2 cut(s) 1043, 1177
Hpy188III TCNNGA 6 cut(s) 41, 71, 627, 662, 733, 799
Hpy8I GTNNAC 2 cut(s) 1043, 1177
Hpy99I CGWCG 2 cut(s) 83, 206
HpyAV CCTTC 3 cut(s) 24, 604, 949
HpyCH4III ACNGT 3 cut(s) 206, 783, 879
HpyCH4IV ACGT 1 cut(s) 1165
HpyCH4V TGCA 3 cut(s) 1019, 1169, 1208
HpyF10VI GCNNNNNNNGC 7 cut(s) 189, 251, 308, 317, 326, 1166, 1205
HpyF3I CTNAG 6 cut(s) 90, 340, 360, 372, 465, 678
HpySE526I ACGT 1 cut(s) 1165
Hsp92I GRCGYC 1 cut(s) 335
Hsp92II CATG 3 cut(s) 200, 449, 1208
HspAI GCGC 3 cut(s) 150, 192, 899
Kzo9I GATC 8 cut(s) 93, 233, 257, 281, 472, 658, 1012, 1149
LguI GCTCTTC 1 cut(s) 524
LmnI GCTCC 2 cut(s) 98, 505
Lsp1109I GCAGC 2 cut(s) 257, 520
MaeI CTAG 2 cut(s) 114, 1074
MaeII ACGT 1 cut(s) 1165
MaeIII GTNAC 4 cut(s) 624, 947, 1006, 1114
MalI GATC 8 cut(s) 95, 235, 259, 283, 474, 660, 1014, 1151
MboI GATC 8 cut(s) 93, 233, 257, 281, 472, 658, 1012, 1149
MflI RGATCY 5 cut(s) 233, 257, 281, 472, 1149
MhlI GDGCHC 6 cut(s) 103, 313, 558, 740, 915, 1162
MlsI TGGCCA 1 cut(s) 1085
MluCI AATT 4 cut(s) 615, 641, 1020, 1109
MluNI TGGCCA 1 cut(s) 1085
MlyI GAGTC 2 cut(s) 68, 82
MmeI TCCRAC 2 cut(s) 102, 200
Mox20I TGGCCA 1 cut(s) 1085
MscI TGGCCA 1 cut(s) 1085
MseI TTAA 3 cut(s) 644, 822, 1185
MslI CAYNNNNRTG 2 cut(s) 444, 890
Msp20I TGGCCA 1 cut(s) 1085
MspA1I CMGCKG 1 cut(s) 722
MspI CCGG 3 cut(s) 132, 180, 279
MspR9I CCNGG 2 cut(s) 132, 434
MvaI CCWGG 1 cut(s) 434
MvnI CGCG 1 cut(s) 901
MwoI GCNNNNNNNGC 7 cut(s) 189, 251, 308, 317, 326, 1166, 1205
NciI CCSGG 1 cut(s) 132
NdeII GATC 8 cut(s) 93, 233, 257, 281, 472, 658, 1012, 1149
NlaIII CATG 3 cut(s) 200, 449, 1208
NlaIV GGNNCC 5 cut(s) 312, 366, 474, 604, 912
NmuCI GTSAC 3 cut(s) 624, 947, 1006
NsbI TGCGCA 1 cut(s) 193
NspI RCATGY 2 cut(s) 200, 1208
NspV TTCGAA 1 cut(s) 619
PaqCI CACCTGC 1 cut(s) 259
PciSI GCTCTTC 1 cut(s) 524
PcsI WCGNNNNNNNCGW 1 cut(s) 625
PfeI GAWTC 4 cut(s) 65, 344, 710, 743
PkrI GCNGC 5 cut(s) 247, 304, 328, 510, 1210
PleI GAGTC 2 cut(s) 68, 82
PpsI GAGTC 2 cut(s) 68, 82
Psp6I CCWGG 1 cut(s) 432
PspGI CCWGG 1 cut(s) 432
PspN4I GGNNCC 5 cut(s) 312, 366, 474, 604, 912
PspPI GGNCC 5 cut(s) 324, 365, 383, 903, 933
PstNI CAGNNNCTG 1 cut(s) 251
PsuI RGATCY 5 cut(s) 233, 257, 281, 472, 1149
PvuII CAGCTG 1 cut(s) 722
RsaI GTAC 2 cut(s) 565, 785
RsaNI GTAC 2 cut(s) 564, 784
RseI CAYNNNNRTG 2 cut(s) 444, 890
SapI GCTCTTC 1 cut(s) 524
SaqAI TTAA 3 cut(s) 644, 822, 1185
SatI GCNGC 5 cut(s) 246, 303, 327, 509, 1209
Sau3AI GATC 8 cut(s) 93, 233, 257, 281, 472, 658, 1012, 1149
Sau96I GGNCC 5 cut(s) 324, 365, 383, 903, 933
SchI GAGTC 2 cut(s) 68, 82
ScrFI CCNGG 2 cut(s) 132, 434
SduI GDGCHC 6 cut(s) 103, 313, 558, 740, 915, 1162
SfcI CTRYAG 1 cut(s) 875
SfuI TTCGAA 1 cut(s) 619
SinI GGWCC 2 cut(s) 365, 903
SmiMI CAYNNNNRTG 2 cut(s) 444, 890
SmlI CTYRAG 1 cut(s) 218
SmoI CTYRAG 1 cut(s) 218
Sse9I AATT 4 cut(s) 615, 641, 1020, 1109
SsiI CCGC 7 cut(s) 183, 243, 270, 303, 327, 901, 1106
SspI AATATT 1 cut(s) 922
SspMI CTAG 2 cut(s) 114, 1074
StyD4I CCNGG 2 cut(s) 130, 432
StyI CCWWGG 2 cut(s) 588, 906
TaaI ACNGT 3 cut(s) 206, 783, 879
TaiI ACGT 1 cut(s) 1168
TaqI TCGA 4 cut(s) 5, 619, 972, 1191
TasI AATT 4 cut(s) 615, 641, 1020, 1109
TatI WGTACW 1 cut(s) 783
TauI GCSGC 2 cut(s) 305, 329
TfiI GAWTC 4 cut(s) 65, 344, 710, 743
Tru1I TTAA 3 cut(s) 644, 822, 1185
Tru9I TTAA 3 cut(s) 644, 822, 1185
TscAI CASTG 2 cut(s) 786, 1015
TseFI GTSAC 3 cut(s) 624, 947, 1006
TseI GCWGC 3 cut(s) 245, 508, 1208
Tsp45I GTSAC 3 cut(s) 624, 947, 1006
TspDTI ATGAA 2 cut(s) 432, 434
TspRI CASTG 2 cut(s) 786, 1015
VpaK11BI GGWCC 2 cut(s) 365, 903
XapI RAATTY 1 cut(s) 615
XceI RCATGY 2 cut(s) 200, 1208
XcmI CCANNNNNNNNNTGG 1 cut(s) 595
XspI CTAG 2 cut(s) 114, 1074
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.