DNA topoisomerase 2-binding protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PTCB-BRCT | PF12738 | 91 - 152 | 9.5e-07 | twin BRCT domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 49, 1297 |
| AccB1I | GGYRCC | 1 cut(s) | 1192 |
| AccII | CGCG | 2 cut(s) | 107, 1183 |
| AciI | CCGC | 4 cut(s) | 12, 82, 105, 1183 |
| AclWI | GGATC | 3 cut(s) | 60, 749, 762 |
| AcsI | RAATTY | 3 cut(s) | 546, 625, 897 |
| AcuI | CTGAAG | 1 cut(s) | 707 |
| AfaI | GTAC | 4 cut(s) | 273, 847, 1067, 1288 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 256, 521, 673, 674 |
| AgsI | TTSAA | 8 cut(s) | 113, 173, 430, 575, 739, 866, 980, 1237 |
| AjnI | CCWGG | 2 cut(s) | 714, 1328 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 377, 409 |
| AluBI | AGCT | 9 cut(s) | 123, 372, 658, 685, 793, 938, 943, 1088, 1212 |
| AluI | AGCT | 9 cut(s) | 123, 372, 658, 685, 793, 938, 943, 1088, 1212 |
| Alw21I | GWGCWC | 2 cut(s) | 840, 1022 |
| Alw26I | GTCTC | 6 cut(s) | 99, 168, 705, 941, 956, 1115 |
| AlwI | GGATC | 3 cut(s) | 60, 749, 762 |
| AoxI | GGCC | 5 cut(s) | 56, 664, 1214, 1326, 1334 |
| ApeKI | GCWGC | 2 cut(s) | 398, 790 |
| ApoI | RAATTY | 3 cut(s) | 546, 625, 897 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 674, 706 |
| AseI | ATTAAT | 1 cut(s) | 450 |
| AspLEI | GCGC | 1 cut(s) | 1183 |
| AspS9I | GGNCC | 6 cut(s) | 182, 647, 665, 1185, 1215, 1326 |
| AsuHPI | GGTGA | 2 cut(s) | 900, 1241 |
| AsuII | TTCGAA | 1 cut(s) | 901 |
| AvaII | GGWCC | 3 cut(s) | 182, 647, 1185 |
| AxyI | CCTNAGG | 1 cut(s) | 642 |
| BaeGI | GKGCMC | 1 cut(s) | 1197 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 829, 862 |
| BamHI | GGATCC | 1 cut(s) | 754 |
| BanI | GGYRCC | 1 cut(s) | 1192 |
| BauI | CACGAG | 1 cut(s) | 1015 |
| Bbv12I | GWGCWC | 2 cut(s) | 840, 1022 |
| BbvCI | CCTCAGC | 1 cut(s) | 747 |
| BbvI | GCAGC | 2 cut(s) | 385, 802 |
| BccI | CCATC | 6 cut(s) | 41, 254, 559, 658, 1205, 1220 |
| BciT130I | CCWGG | 2 cut(s) | 716, 1330 |
| BcoDI | GTCTC | 6 cut(s) | 99, 168, 705, 941, 956, 1115 |
| BfaI | CTAG | 1 cut(s) | 99 |
| BfmI | CTRYAG | 1 cut(s) | 1157 |
| BisI | GCNGC | 3 cut(s) | 105, 399, 791 |
| BlpI | GCTNAGC | 1 cut(s) | 939 |
| BlsI | GCNGC | 3 cut(s) | 106, 400, 792 |
| Bme1390I | CCNGG | 2 cut(s) | 716, 1330 |
| Bme18I | GGWCC | 3 cut(s) | 182, 647, 1185 |
| BmgT120I | GGNCC | 6 cut(s) | 182, 647, 665, 1185, 1215, 1326 |
| BmiI | GGNNCC | 4 cut(s) | 648, 756, 886, 1194 |
| BmrFI | CCNGG | 2 cut(s) | 716, 1330 |
| BmsI | GCATC | 1 cut(s) | 36 |
| BpmI | CTGGAG | 1 cut(s) | 965 |
| Bpu10I | CCTNAGC | 1 cut(s) | 747 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 939 |
| Bpu14I | TTCGAA | 1 cut(s) | 901 |
| BpuEI | CTTGAG | 2 cut(s) | 103, 477 |
| BsaI | GGTCTC | 1 cut(s) | 705 |
| BsaJI | CCNNGG | 3 cut(s) | 85, 870, 1188 |
| BsaWI | WCCGGW | 1 cut(s) | 1292 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 256, 521, 673, 674 |
| Bse1I | ACTGG | 1 cut(s) | 437 |
| Bse21I | CCTNAGG | 1 cut(s) | 642 |
| Bse3DI | GCAATG | 3 cut(s) | 378, 478, 885 |
| BseBI | CCWGG | 2 cut(s) | 716, 1330 |
| BseDI | CCNNGG | 3 cut(s) | 85, 870, 1188 |
| BseGI | GGATG | 4 cut(s) | 27, 265, 370, 1231 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 256, 521, 673, 674 |
| BseMI | GCAATG | 3 cut(s) | 378, 478, 885 |
| BseMII | CTCAG | 3 cut(s) | 738, 930, 951 |
| BseNI | ACTGG | 1 cut(s) | 437 |
| BseSI | GKGCMC | 1 cut(s) | 1197 |
| BseXI | GCAGC | 2 cut(s) | 385, 802 |
| Bsh1236I | CGCG | 2 cut(s) | 107, 1183 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1293 |
| BshFI | GGCC | 5 cut(s) | 58, 666, 1216, 1328, 1336 |
| BshNI | GGYRCC | 1 cut(s) | 1192 |
| BsiEI | CGRYCG | 1 cut(s) | 1293 |
| BsiHKAI | GWGCWC | 2 cut(s) | 840, 1022 |
| BsiSI | CCGG | 1 cut(s) | 1293 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 256, 521, 673, 674 |
| BsmAI | GTCTC | 6 cut(s) | 99, 168, 705, 941, 956, 1115 |
| BsmBI | CGTCTC | 1 cut(s) | 1115 |
| BsnI | GGCC | 5 cut(s) | 58, 666, 1216, 1328, 1336 |
| Bso31I | GGTCTC | 1 cut(s) | 705 |
| Bsp119I | TTCGAA | 1 cut(s) | 901 |
| Bsp1286I | GDGCHC | 3 cut(s) | 840, 1022, 1197 |
| Bsp1407I | TGTACA | 1 cut(s) | 1065 |
| Bsp143I | GATC | 2 cut(s) | 65, 754 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 939 |
| BspACI | CCGC | 4 cut(s) | 12, 82, 105, 1183 |
| BspANI | GGCC | 5 cut(s) | 58, 666, 1216, 1328, 1336 |
| BspCNI | CTCAG | 3 cut(s) | 739, 931, 952 |
| BspFNI | CGCG | 2 cut(s) | 107, 1183 |
| BspLI | GGNNCC | 4 cut(s) | 648, 756, 886, 1194 |
| BspPI | GGATC | 3 cut(s) | 60, 749, 762 |
| BspQI | GCTCTTC | 1 cut(s) | 806 |
| BspT104I | TTCGAA | 1 cut(s) | 901 |
| BspT107I | GGYRCC | 1 cut(s) | 1192 |
| BspTNI | GGTCTC | 1 cut(s) | 705 |
| BsrDI | GCAATG | 3 cut(s) | 378, 478, 885 |
| BsrGI | TGTACA | 1 cut(s) | 1065 |
| BsrI | ACTGG | 1 cut(s) | 437 |
| BssECI | CCNNGG | 3 cut(s) | 85, 870, 1188 |
| BssMI | GATC | 2 cut(s) | 65, 754 |
| BssSI | CACGAG | 1 cut(s) | 1015 |
| BssT1I | CCWWGG | 2 cut(s) | 870, 1188 |
| Bst2BI | CACGAG | 1 cut(s) | 1015 |
| Bst2UI | CCWGG | 2 cut(s) | 716, 1330 |
| Bst4CI | ACNGT | 2 cut(s) | 1065, 1161 |
| Bst6I | CTCTTC | 2 cut(s) | 156, 806 |
| BstAUI | TGTACA | 1 cut(s) | 1065 |
| BstBI | TTCGAA | 1 cut(s) | 901 |
| BstC8I | GCNNGC | 1 cut(s) | 1214 |
| BstDEI | CTNAG | 6 cut(s) | 319, 642, 654, 747, 939, 960 |
| BstF5I | GGATG | 4 cut(s) | 27, 265, 370, 1231 |
| BstFNI | CGCG | 2 cut(s) | 107, 1183 |
| BstHHI | GCGC | 1 cut(s) | 1183 |
| BstKTI | GATC | 2 cut(s) | 68, 757 |
| BstMAI | GTCTC | 6 cut(s) | 99, 168, 705, 941, 956, 1115 |
| BstMBI | GATC | 2 cut(s) | 65, 754 |
| BstMCI | CGRYCG | 1 cut(s) | 1293 |
| BstNI | CCWGG | 2 cut(s) | 716, 1330 |
| BstSCI | CCNGG | 2 cut(s) | 714, 1328 |
| BstSFI | CTRYAG | 1 cut(s) | 1157 |
| BstSLI | GKGCMC | 1 cut(s) | 1197 |
| BstUI | CGCG | 2 cut(s) | 107, 1183 |
| BstV1I | GCAGC | 2 cut(s) | 385, 802 |
| BstX2I | RGATCY | 1 cut(s) | 754 |
| BstYI | RGATCY | 1 cut(s) | 754 |
| Bsu36I | CCTNAGG | 1 cut(s) | 642 |
| BsuRI | GGCC | 5 cut(s) | 58, 666, 1216, 1328, 1336 |
| BtgZI | GCGATG | 1 cut(s) | 464 |
| BtsCI | GGATG | 4 cut(s) | 27, 265, 370, 1231 |
| BtsI | GCAGTG | 1 cut(s) | 221 |
| BtsIMutI | CAGTG | 2 cut(s) | 221, 1061 |
| Cac8I | GCNNGC | 1 cut(s) | 1214 |
| CfoI | GCGC | 1 cut(s) | 1183 |
| Cfr13I | GGNCC | 6 cut(s) | 182, 647, 665, 1185, 1215, 1326 |
| Csp6I | GTAC | 4 cut(s) | 272, 846, 1066, 1287 |
| CviAII | CATG | 1 cut(s) | 728 |
| CviQI | GTAC | 4 cut(s) | 272, 846, 1066, 1287 |
| DdeI | CTNAG | 6 cut(s) | 319, 642, 654, 747, 939, 960 |
| DpnI | GATC | 2 cut(s) | 67, 756 |
| DpnII | GATC | 2 cut(s) | 65, 754 |
| DraI | TTTAAA | 1 cut(s) | 1105 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 49, 1297 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 49, 1297 |
| Eam1104I | CTCTTC | 2 cut(s) | 156, 806 |
| EarI | CTCTTC | 2 cut(s) | 156, 806 |
| EciI | GGCGGA | 1 cut(s) | 71 |
| Eco130I | CCWWGG | 2 cut(s) | 870, 1188 |
| Eco31I | GGTCTC | 1 cut(s) | 705 |
| Eco47I | GGWCC | 3 cut(s) | 182, 647, 1185 |
| Eco57I | CTGAAG | 1 cut(s) | 707 |
| Eco81I | CCTNAGG | 1 cut(s) | 642 |
| EcoO109I | RGGNCCY | 2 cut(s) | 182, 1326 |
| EcoRI | GAATTC | 3 cut(s) | 546, 625, 897 |
| EcoRII | CCWGG | 2 cut(s) | 714, 1328 |
| EcoT14I | CCWWGG | 2 cut(s) | 870, 1188 |
| ErhI | CCWWGG | 2 cut(s) | 870, 1188 |
| Esp3I | CGTCTC | 1 cut(s) | 1115 |
| FaeI | CATG | 1 cut(s) | 731 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 377, 409 |
| FatI | CATG | 1 cut(s) | 727 |
| FauI | CCCGC | 1 cut(s) | 19 |
| Fnu4HI | GCNGC | 3 cut(s) | 105, 399, 791 |
| FokI | GGATG | 4 cut(s) | 14, 272, 377, 1238 |
| Fsp4HI | GCNGC | 3 cut(s) | 105, 399, 791 |
| FspBI | CTAG | 1 cut(s) | 99 |
| GlaI | GCGC | 1 cut(s) | 1182 |
| GluI | GCNGC | 3 cut(s) | 105, 399, 791 |
| GsuI | CTGGAG | 1 cut(s) | 965 |
| HaeIII | GGCC | 5 cut(s) | 58, 666, 1216, 1328, 1336 |
| HapII | CCGG | 1 cut(s) | 1293 |
| HhaI | GCGC | 1 cut(s) | 1183 |
| Hin1II | CATG | 1 cut(s) | 731 |
| Hin6I | GCGC | 1 cut(s) | 1181 |
| HinP1I | GCGC | 1 cut(s) | 1181 |
| HindIII | AAGCTT | 1 cut(s) | 1086 |
| HinfI | GANTC | 5 cut(s) | 116, 497, 992, 1025, 1298 |
| HpaII | CCGG | 1 cut(s) | 1293 |
| HphI | GGTGA | 2 cut(s) | 900, 1241 |
| Hpy166II | GTNNAC | 2 cut(s) | 240, 599 |
| Hpy188I | TCNGA | 3 cut(s) | 556, 710, 1263 |
| Hpy188III | TCNNGA | 6 cut(s) | 113, 134, 494, 1015, 1081, 1319 |
| Hpy8I | GTNNAC | 2 cut(s) | 240, 599 |
| Hpy99I | CGWCG | 3 cut(s) | 55, 1310, 1313 |
| HpyAV | CCTTC | 3 cut(s) | 165, 886, 1231 |
| HpyCH4III | ACNGT | 2 cut(s) | 1065, 1161 |
| HpyCH4IV | ACGT | 1 cut(s) | 1305 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 27, 129, 401, 471 |
| HpyF3I | CTNAG | 6 cut(s) | 319, 642, 654, 747, 939, 960 |
| HpySE526I | ACGT | 1 cut(s) | 1305 |
| Hsp92II | CATG | 1 cut(s) | 731 |
| HspAI | GCGC | 1 cut(s) | 1181 |
| Kzo9I | GATC | 2 cut(s) | 65, 754 |
| LguI | GCTCTTC | 1 cut(s) | 806 |
| LmnI | GCTCC | 1 cut(s) | 787 |
| Lsp1109I | GCAGC | 2 cut(s) | 385, 802 |
| LweI | GCATC | 1 cut(s) | 36 |
| MaeI | CTAG | 1 cut(s) | 99 |
| MaeII | ACGT | 1 cut(s) | 1305 |
| MaeIII | GTNAC | 5 cut(s) | 219, 322, 538, 906, 1229 |
| MalI | GATC | 2 cut(s) | 67, 756 |
| MboI | GATC | 2 cut(s) | 65, 754 |
| MflI | RGATCY | 1 cut(s) | 754 |
| MhlI | GDGCHC | 3 cut(s) | 840, 1022, 1197 |
| MluCI | AATT | 5 cut(s) | 451, 546, 625, 897, 923 |
| MlyI | GAGTC | 2 cut(s) | 110, 1307 |
| MseI | TTAA | 5 cut(s) | 39, 306, 450, 926, 1104 |
| MslI | CAYNNNNRTG | 3 cut(s) | 172, 726, 1172 |
| MspI | CCGG | 1 cut(s) | 1293 |
| MspR9I | CCNGG | 2 cut(s) | 716, 1330 |
| MvaI | CCWGG | 2 cut(s) | 716, 1330 |
| MvnI | CGCG | 2 cut(s) | 107, 1183 |
| NdeII | GATC | 2 cut(s) | 65, 754 |
| NlaIII | CATG | 1 cut(s) | 731 |
| NlaIV | GGNNCC | 4 cut(s) | 648, 756, 886, 1194 |
| NmeAIII | GCCGAG | 1 cut(s) | 66 |
| NmuCI | GTSAC | 3 cut(s) | 219, 906, 1229 |
| NspV | TTCGAA | 1 cut(s) | 901 |
| PciSI | GCTCTTC | 1 cut(s) | 806 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 50, 1317 |
| PfeI | GAWTC | 3 cut(s) | 497, 992, 1025 |
| PkrI | GCNGC | 3 cut(s) | 106, 400, 792 |
| PleI | GAGTC | 2 cut(s) | 110, 1306 |
| PpsI | GAGTC | 2 cut(s) | 110, 1306 |
| PpuMI | RGGWCCY | 1 cut(s) | 182 |
| PshBI | ATTAAT | 1 cut(s) | 450 |
| Psp5II | RGGWCCY | 1 cut(s) | 182 |
| Psp6I | CCWGG | 2 cut(s) | 714, 1328 |
| PspGI | CCWGG | 2 cut(s) | 714, 1328 |
| PspN4I | GGNNCC | 4 cut(s) | 648, 756, 886, 1194 |
| PspPI | GGNCC | 6 cut(s) | 182, 647, 665, 1185, 1215, 1326 |
| PspPPI | RGGWCCY | 1 cut(s) | 182 |
| PsuI | RGATCY | 1 cut(s) | 754 |
| RsaI | GTAC | 4 cut(s) | 273, 847, 1067, 1288 |
| RsaNI | GTAC | 4 cut(s) | 272, 846, 1066, 1287 |
| RseI | CAYNNNNRTG | 3 cut(s) | 172, 726, 1172 |
| SapI | GCTCTTC | 1 cut(s) | 806 |
| SaqAI | TTAA | 5 cut(s) | 39, 306, 450, 926, 1104 |
| SatI | GCNGC | 3 cut(s) | 105, 399, 791 |
| Sau3AI | GATC | 2 cut(s) | 65, 754 |
| Sau96I | GGNCC | 6 cut(s) | 182, 647, 665, 1185, 1215, 1326 |
| SchI | GAGTC | 2 cut(s) | 110, 1307 |
| ScrFI | CCNGG | 2 cut(s) | 716, 1330 |
| SduI | GDGCHC | 3 cut(s) | 840, 1022, 1197 |
| SfaNI | GCATC | 1 cut(s) | 36 |
| SfcI | CTRYAG | 1 cut(s) | 1157 |
| SfuI | TTCGAA | 1 cut(s) | 901 |
| SinI | GGWCC | 3 cut(s) | 182, 647, 1185 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 172, 726, 1172 |
| SmlI | CTYRAG | 2 cut(s) | 118, 492 |
| SmoI | CTYRAG | 2 cut(s) | 118, 492 |
| Sse9I | AATT | 5 cut(s) | 451, 546, 625, 897, 923 |
| SsiI | CCGC | 4 cut(s) | 12, 82, 105, 1183 |
| SspI | AATATT | 1 cut(s) | 1204 |
| SspMI | CTAG | 1 cut(s) | 99 |
| StyD4I | CCNGG | 2 cut(s) | 714, 1328 |
| StyI | CCWWGG | 2 cut(s) | 870, 1188 |
| TaaI | ACNGT | 2 cut(s) | 1065, 1161 |
| TaiI | ACGT | 1 cut(s) | 1308 |
| TaqI | TCGA | 2 cut(s) | 901, 1254 |
| TaqII | GACCGA | 1 cut(s) | 1287 |
| TasI | AATT | 5 cut(s) | 451, 546, 625, 897, 923 |
| TatI | WGTACW | 2 cut(s) | 271, 1065 |
| TauI | GCSGC | 1 cut(s) | 107 |
| TfiI | GAWTC | 3 cut(s) | 497, 992, 1025 |
| Tru1I | TTAA | 5 cut(s) | 39, 306, 450, 926, 1104 |
| Tru9I | TTAA | 5 cut(s) | 39, 306, 450, 926, 1104 |
| TscAI | CASTG | 2 cut(s) | 228, 1068 |
| TseFI | GTSAC | 3 cut(s) | 219, 906, 1229 |
| TseI | GCWGC | 2 cut(s) | 398, 790 |
| Tsp45I | GTSAC | 3 cut(s) | 219, 906, 1229 |
| TspDTI | ATGAA | 6 cut(s) | 312, 489, 573, 714, 716, 984 |
| TspRI | CASTG | 2 cut(s) | 228, 1068 |
| VpaK11BI | GGWCC | 3 cut(s) | 182, 647, 1185 |
| VspI | ATTAAT | 1 cut(s) | 450 |
| XapI | RAATTY | 3 cut(s) | 546, 625, 897 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 877 |
| XspI | CTAG | 1 cut(s) | 99 |