Rmu_sc0002460.1_g000027

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002460.1
OG0000290
Physical Location & Seq
Forward (+)
97058 .. 101164
4107 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002460.1_g000027.1.cds

Sequence Viewer

Length: 1983 bp
atgggttccaaaaagaagggaaagtctgaaagaaagaaaaaatcagtggaagaagctgatgtgaagacttgtctcgagtctgatgagtctgttgagaagcaagtagaatctgtatcagcagacaccgtcacaaccagtgaatcaactaaaattagagggaagcgaagtgtggtggaaatgtacaatgttttgatcaagaaagcattgggtaaaaagttgaaagtgacatacactgacacaggcaatccaaatggacgagcatggcacaatctgcaatcatacataggaatgctggcgcgtaaaatggtgccgatcaacattgaaagctggcctgcagtggacaaagacttgaaagataaaatttggattgatgtccaggatacattcaaagtggcccctgaaagcaagaaattggtgttgacatctaccggcactaaatggagacaattcaagacctacttaacaaataagcatgtgctgccatacttggggaagaagaagaaactgaggaagccaccgaagcaatatgcattcattgggttacaaccatggaaggaatttgtaactcagaggaagacagaggaatggctggatgaattgttggagaagaagagtaagggtgagctagaaatatcagggagcgatgatgttctcactcaagcactagaaactcctgaacactcgggtagggtgaggggtgttggaggcttcgtcaatccgtccacctactttaagcttccaaagcagaaaagggtcagaattaccaaggtagaattaatggcacgtgatagagagcgtgatcgggagttggaggagacaaagaaaatgcttattgaaaaacaagcaaaggcagaagatctcttaaacaaaaggattgctcaactagaagcactaataacagacaaggcgaactatgcaccccattcccctatatcagataagggcagttttcatgatagagtgaaaaaaaattcccctatattagatgacaaggtgcaagaaaatgtggatgattgtgaaattgttcctccacctactgataagggtggcatatgtgagttagcagtgaataccatcaccaacatagttggttttggtaccgtattcgatgatgtggatattaataagatgataaatggagctgcattgaaggagggatgcgttagagtgtcagtggatggtgagattcaaggtgatgcaccacttcctttccctatagcgggtgagatggaattggttcgagaagccattggaagtcacgtggcttggcctgaggagcttgtaattcggagacagccatcaaagaaaaagataaggaagaatgattttgtcaaatcattgttcaataaagctgaggtcaacccgtttgtgcccaagcgctgcaagctattgtacaaacatgccacaacaatcatgaaacatactagtgaggcaataaccacagtattggacgataaagtctttggcgtacacaaagaactcttcatcttgacagagaatgtgattgatatgttagaaatgcagaagattggccaaggagtgatagcagcatacatggcccacctccatgaagttgttacagaaagagacgagttcgataattttgcctttattgatccggctgctacatataactgtgagagatcagattttggttcctatttagttaaccggttgaaagagggcaagactgatcgcatattctttatgccctacaatccaggggaacattggatattgacaatcatatgggaggatgatatctacatcttggaccctttggggaaatcagtcaattaccaagcatgggagagctcggtgataaatgcggttaaaagtttcaatgctaaaacgggtagggctaacaaggtgccgaaattgaaactacttccgtgggcagcaaagactccgaaaggctacacccaacagcaacttgacgaggtgcgcattgaggtggctgactatttgcagactttgctatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_24

Protein Analysis

660

Amino Acids

75.0

Weight (kDa)

8.97

Isoelectric Point (pI)

33.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000290)

Species Orthologous Gene IDs
prunus_persica Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0352291 RchiOBHm_Chr1g0352301 RchiOBHm_Chr2g0145261 RchiOBHm_Chr2g0160781 RchiOBHm_Chr2g0160871 RchiOBHm_Chr3g0460901 RchiOBHm_Chr3g0494431 RchiOBHm_Chr3g0494441 RchiOBHm_Chr4g0385451 RchiOBHm_Chr4g0417051 RchiOBHm_Chr4g0424111 RchiOBHm_Chr5g0035911 RchiOBHm_Chr6g0269251 RchiOBHm_Chr6g0274141 RchiOBHm_Chr7g0191841 RchiOBHm_Chr7g0196691 RchiOBHm_Chr7g0211271 RchiOBHm_Chr7g0227321 RchiOBHm_Chr7g0242811
rosa_laevigata RLG00000013212
rosa_multiflora Rmu_co8387591.1_g000001 Rmu_sc0000147.1_g000094 Rmu_sc0000340.1_g000034 Rmu_sc0000546.1_g000048 Rmu_sc0001461.1_g000092 Rmu_sc0001659.1_g000042 Rmu_sc0002460.1_g000027 Rmu_sc0003170.1_g000021 Rmu_sc0004301.1_g000015 Rmu_sc0004344.1_g000009 Rmu_sc0005539.1_g000024 Rmu_sc0006803.1_g000018 Rmu_sc0006888.1_g000057 Rmu_sc0009330.1_g000004 Rmu_sc0010704.1_g000001 Rmu_sc0012787.1_g000002 Rmu_sc0023684.1_g000002 Rmu_ssc0000189.1_g000010
rosa_roxburghii Rroxscaffold_5G00377480 Rroxscaffold_6G00389290 Rroxscaffold_6G00414410 Rroxscaffold_7G00202010
rosa_rugosa Rorug01G0242100 Rorug02G0188500 Rorug02G0273900 Rorug03G0342600 Rorug05G0239000 Rorug07G0163300 Rorug07G0192100
rosa_samantha Rh1BG091000 Rh1BG200300 Rh1DG228100 Rh2AG268900 Rh2AG431600 Rh2AG508400 Rh2CG258700 Rh2CG417500 Rh2CG493900 Rh3AG323800 Rh3BG237800 Rh3CG306700 Rh3DG204700 Rh3DG259400 Rh4AG203100 Rh4AG377200 Rh4BG054300 Rh4BG125100 Rh4BG146000 Rh4BG251900 Rh4DG132500 Rh4DG155000 Rh4DG384000 Rh5BG230700 Rh5CG382700 Rh5CG532300 Rh5DG235600 Rh5DG259700 Rh5DG320000 Rh6AG162900 Rh6CG065400 Rh6CG065500 Rh6CG307600 Rh6CG310500 Rh6CG391900 Rh6DG062500 Rh6DG062600 Rh6DG187500 Rh7BG296200 Rh7DG266900 Rh7DG322300
rosa_wichuraiana Rw2G018510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1457
Acc16I TGCGCA 1 cut(s) 1946
Acc65I GGTACC 1 cut(s) 1097
AccB1I GGYRCC 3 cut(s) 307, 1097, 1870
AccII CGCG 1 cut(s) 298
AciI CCGC 2 cut(s) 1220, 1829
AclWI GGATC 1 cut(s) 1610
AcoI YGGCCR 1 cut(s) 1531
AcsI RAATTY 3 cut(s) 360, 557, 970
AcvI CACGTG 2 cut(s) 785, 1261
AfaI GTAC 4 cut(s) 182, 1099, 1394, 1470
AfeI AGCGCT 1 cut(s) 1379
AfiI CCNNNNNNNGG 4 cut(s) 488, 1219, 1220, 1807
AgeI ACCGGT 1 cut(s) 1671
AhlI ACTAGT 1 cut(s) 1424
AjnI CCWGG 2 cut(s) 375, 1720
AluBI AGCT 9 cut(s) 56, 327, 625, 736, 1142, 1279, 1352, 1387, 1815
AluI AGCT 9 cut(s) 56, 327, 625, 736, 1142, 1279, 1352, 1387, 1815
Alw21I GWGCWC 1 cut(s) 1817
Alw26I GTCTC 5 cut(s) 77, 436, 809, 1285, 1581
AlwI GGATC 1 cut(s) 1610
Ama87I CYCGRG 2 cut(s) 74, 682
Aor51HI AGCGCT 1 cut(s) 1379
AoxI GGCC 5 cut(s) 329, 393, 1268, 1531, 1557
ApeKI GCWGC 6 cut(s) 478, 1142, 1380, 1547, 1622, 1898
ApoI RAATTY 3 cut(s) 360, 557, 970
AseI ATTAAT 2 cut(s) 776, 1122
AsiGI ACCGGT 1 cut(s) 1671
Asp700I GAANNNNTTC 2 cut(s) 1023, 1236
Asp718I GGTACC 1 cut(s) 1097
AspLEI GCGC 3 cut(s) 298, 1380, 1947
AspS9I GGNCC 3 cut(s) 394, 1558, 1774
AsuHPI GGTGA 7 cut(s) 632, 703, 1069, 1193, 1205, 1235, 1831
AvaI CYCGRG 2 cut(s) 74, 682
AvaII GGWCC 1 cut(s) 1774
AxyI CCTNAGG 1 cut(s) 1272
BaeGI GKGCMC 1 cut(s) 1374
BalI TGGCCA 1 cut(s) 1533
BanI GGYRCC 3 cut(s) 307, 1097, 1870
BanII GRGCYC 1 cut(s) 1817
BbrPI CACGTG 2 cut(s) 785, 1261
BbsI GAAGAC 2 cut(s) 71, 581
Bbv12I GWGCWC 1 cut(s) 1817
BbvCI CCTCAGC 1 cut(s) 1353
BbvI GCAGC 6 cut(s) 465, 1129, 1367, 1559, 1609, 1910
BccI CCATC 4 cut(s) 1082, 1172, 1222, 1306
BcgI CGANNNNNNTGC 2 cut(s) 1586, 1620
BciT130I CCWGG 2 cut(s) 377, 1722
BciVI GTATCC 1 cut(s) 373
BclI TGATCA 1 cut(s) 192
BcoDI GTCTC 5 cut(s) 77, 436, 809, 1285, 1581
BcuI ACTAGT 1 cut(s) 1424
BfaI CTAG 4 cut(s) 626, 665, 884, 1425
BfmI CTRYAG 3 cut(s) 333, 1215, 1979
BfoI RGCGCY 1 cut(s) 1381
BfuI GTATCC 1 cut(s) 373
BglII AGATCT 1 cut(s) 856
BisI GCNGC 6 cut(s) 479, 1143, 1381, 1548, 1623, 1899
BlsI GCNGC 6 cut(s) 480, 1144, 1382, 1549, 1624, 1900
Bme1390I CCNGG 2 cut(s) 377, 1722
Bme18I GGWCC 1 cut(s) 1774
BmeT110I CYCGRG 2 cut(s) 74, 682
BmgT120I GGNCC 3 cut(s) 394, 1558, 1774
BmiI GGNNCC 7 cut(s) 7, 309, 396, 1099, 1657, 1776, 1872
BmrFI CCNGG 2 cut(s) 377, 1722
BmsI GCATC 2 cut(s) 1148, 1186
BpiI GAAGAC 2 cut(s) 71, 581
Bpu10I CCTNAGC 1 cut(s) 1353
BpuEI CTTGAG 1 cut(s) 642
BsaAI YACGTR 2 cut(s) 785, 1261
BsaJI CCNNGG 5 cut(s) 548, 765, 1534, 1721, 1892
BsaWI WCCGGW 1 cut(s) 1671
BsaXI ACNNNNNCTCC 2 cut(s) 696, 726
Bsc4I CCNNNNNNNGG 4 cut(s) 488, 1219, 1220, 1807
Bse118I RCCGGY 2 cut(s) 428, 1671
Bse1I ACTGG 1 cut(s) 135
Bse21I CCTNAGG 1 cut(s) 1272
BseBI CCWGG 2 cut(s) 377, 1722
BseDI CCNNGG 5 cut(s) 548, 765, 1534, 1721, 1892
BseGI GGATG 5 cut(s) 598, 1015, 1163, 1183, 1762
BseLI CCNNNNNNNGG 4 cut(s) 488, 1219, 1220, 1807
BseMII CTCAG 4 cut(s) 497, 581, 1263, 1344
BseNI ACTGG 1 cut(s) 135
BseRI GAGGAG 2 cut(s) 827, 1289
BseSI GKGCMC 1 cut(s) 1374
BseXI GCAGC 6 cut(s) 465, 1129, 1367, 1559, 1609, 1910
Bsh1236I CGCG 1 cut(s) 298
BshFI GGCC 5 cut(s) 331, 395, 1270, 1533, 1559
BshNI GGYRCC 3 cut(s) 307, 1097, 1870
BshTI ACCGGT 1 cut(s) 1671
BsiHKAI GWGCWC 1 cut(s) 1817
BsiHKCI CYCGRG 2 cut(s) 74, 682
BsiSI CCGG 3 cut(s) 429, 1619, 1672
BslI CCNNNNNNNGG 4 cut(s) 488, 1219, 1220, 1807
BsmAI GTCTC 5 cut(s) 77, 436, 809, 1285, 1581
BsmBI CGTCTC 1 cut(s) 1581
BsmI GAATGC 2 cut(s) 294, 530
BsnI GGCC 5 cut(s) 331, 395, 1270, 1533, 1559
BsoBI CYCGRG 2 cut(s) 74, 682
Bsp1286I GDGCHC 2 cut(s) 1374, 1817
Bsp1407I TGTACA 2 cut(s) 180, 1392
Bsp143I GATC 7 cut(s) 192, 312, 799, 856, 1615, 1643, 1693
Bsp19I CCATGG 1 cut(s) 548
BspACI CCGC 2 cut(s) 1220, 1829
BspANI GGCC 5 cut(s) 331, 395, 1270, 1533, 1559
BspCNI CTCAG 4 cut(s) 498, 580, 1264, 1345
BspFNI CGCG 1 cut(s) 298
BspHI TCATGA 2 cut(s) 952, 1413
BspLI GGNNCC 7 cut(s) 7, 309, 396, 1099, 1657, 1776, 1872
BspMAI CTGCAG 1 cut(s) 337
BspPI GGATC 1 cut(s) 1610
BspT107I GGYRCC 3 cut(s) 307, 1097, 1870
BsrFI RCCGGY 2 cut(s) 428, 1671
BsrGI TGTACA 2 cut(s) 180, 1392
BsrI ACTGG 1 cut(s) 135
BssAI RCCGGY 2 cut(s) 428, 1671
BssECI CCNNGG 5 cut(s) 548, 765, 1534, 1721, 1892
BssMI GATC 7 cut(s) 192, 312, 799, 856, 1615, 1643, 1693
BssT1I CCWWGG 3 cut(s) 548, 765, 1534
Bst2UI CCWGG 2 cut(s) 377, 1722
Bst4CI ACNGT 4 cut(s) 127, 1102, 1444, 1637
Bst6I CTCTTC 2 cut(s) 605, 1487
BstAPI GCANNNNNTGC 3 cut(s) 271, 478, 1975
BstAUI TGTACA 2 cut(s) 180, 1392
BstBAI YACGTR 2 cut(s) 785, 1261
BstC8I GCNNGC 4 cut(s) 294, 329, 333, 1385
BstDEI CTNAG 4 cut(s) 506, 567, 1272, 1353
BstDSI CCRYGG 2 cut(s) 548, 1892
BstF5I GGATG 5 cut(s) 598, 1015, 1163, 1183, 1762
BstFNI CGCG 1 cut(s) 298
BstH2I RGCGCY 1 cut(s) 1381
BstHHI GCGC 3 cut(s) 298, 1380, 1947
BstKTI GATC 7 cut(s) 195, 315, 802, 859, 1618, 1646, 1696
BstMAI GTCTC 5 cut(s) 77, 436, 809, 1285, 1581
BstMBI GATC 7 cut(s) 192, 312, 799, 856, 1615, 1643, 1693
BstMWI GCNNNNNNNGC 9 cut(s) 271, 478, 520, 742, 914, 1276, 1384, 1556, 1975
BstNI CCWGG 2 cut(s) 377, 1722
BstNSI RCATGY 2 cut(s) 476, 1403
BstSCI CCNGG 2 cut(s) 375, 1720
BstSFI CTRYAG 3 cut(s) 333, 1215, 1979
BstSLI GKGCMC 1 cut(s) 1374
BstUI CGCG 1 cut(s) 298
BstV1I GCAGC 6 cut(s) 465, 1129, 1367, 1559, 1609, 1910
BstV2I GAAGAC 2 cut(s) 71, 581
BstX2I RGATCY 1 cut(s) 856
BstXI CCANNNNNNTGG 1 cut(s) 1447
BstYI RGATCY 1 cut(s) 856
Bsu36I CCTNAGG 1 cut(s) 1272
BsuI GTATCC 1 cut(s) 373
BsuRI GGCC 5 cut(s) 331, 395, 1270, 1533, 1559
BtgI CCRYGG 2 cut(s) 548, 1892
BtgZI GCGATG 1 cut(s) 657
BtsCI GGATG 5 cut(s) 598, 1015, 1163, 1183, 1762
BtsI GCAGTG 2 cut(s) 342, 1071
BtsIMutI CAGTG 6 cut(s) 51, 142, 231, 342, 1071, 1179
Cac8I GCNNGC 4 cut(s) 294, 329, 333, 1385
CciI TCATGA 2 cut(s) 952, 1413
CfoI GCGC 3 cut(s) 298, 1380, 1947
Cfr10I RCCGGY 2 cut(s) 428, 1671
Cfr13I GGNCC 3 cut(s) 394, 1558, 1774
Csp6I GTAC 4 cut(s) 181, 1098, 1393, 1469
CspAI ACCGGT 1 cut(s) 1671
CviAII CATG 9 cut(s) 261, 473, 549, 953, 1400, 1414, 1555, 1568, 1806
CviQI GTAC 4 cut(s) 181, 1098, 1393, 1469
DdeI CTNAG 4 cut(s) 506, 567, 1272, 1353
DpnI GATC 7 cut(s) 194, 314, 801, 858, 1617, 1645, 1695
DpnII GATC 7 cut(s) 192, 312, 799, 856, 1615, 1643, 1693
DrdI GACNNNNNNGTC 1 cut(s) 1457
DseDI GACNNNNNNGTC 1 cut(s) 1457
EaeI YGGCCR 1 cut(s) 1531
Eam1104I CTCTTC 2 cut(s) 605, 1487
EarI CTCTTC 2 cut(s) 605, 1487
Ecl136II GAGCTC 1 cut(s) 1815
Eco130I CCWWGG 3 cut(s) 548, 765, 1534
Eco24I GRGCYC 1 cut(s) 1817
Eco32I GATATC 1 cut(s) 1762
Eco47I GGWCC 1 cut(s) 1774
Eco47III AGCGCT 1 cut(s) 1379
Eco53kI GAGCTC 1 cut(s) 1815
Eco72I CACGTG 2 cut(s) 785, 1261
Eco81I CCTNAGG 1 cut(s) 1272
Eco88I CYCGRG 2 cut(s) 74, 682
EcoICRI GAGCTC 1 cut(s) 1815
EcoRII CCWGG 2 cut(s) 375, 1720
EcoRV GATATC 1 cut(s) 1762
EcoT14I CCWWGG 3 cut(s) 548, 765, 1534
EcoT22I ATGCAT 1 cut(s) 532
EcoT38I GRGCYC 1 cut(s) 1817
ErhI CCWWGG 3 cut(s) 548, 765, 1534
Esp3I CGTCTC 1 cut(s) 1581
FaeI CATG 9 cut(s) 264, 476, 552, 956, 1403, 1417, 1558, 1571, 1809
FalI AAGNNNNNCTT 2 cut(s) 443, 475
FatI CATG 9 cut(s) 260, 472, 548, 952, 1399, 1413, 1554, 1567, 1805
FauI CCCGC 1 cut(s) 1213
FauNDI CATATG 2 cut(s) 1052, 1748
FbaI TGATCA 1 cut(s) 192
Fnu4HI GCNGC 6 cut(s) 479, 1143, 1381, 1548, 1623, 1899
FokI GGATG 5 cut(s) 605, 1022, 1170, 1190, 1769
FriOI GRGCYC 1 cut(s) 1817
Fsp4HI GCNGC 6 cut(s) 479, 1143, 1381, 1548, 1623, 1899
FspAI RTGCGCAY 1 cut(s) 1946
FspBI CTAG 4 cut(s) 626, 665, 884, 1425
FspI TGCGCA 1 cut(s) 1946
GlaI GCGC 3 cut(s) 297, 1379, 1946
GluI GCNGC 6 cut(s) 479, 1143, 1381, 1548, 1623, 1899
HaeII RGCGCY 1 cut(s) 1381
HaeIII GGCC 5 cut(s) 331, 395, 1270, 1533, 1559
HapII CCGG 3 cut(s) 429, 1619, 1672
HhaI GCGC 3 cut(s) 298, 1380, 1947
Hin1II CATG 9 cut(s) 264, 476, 552, 956, 1403, 1417, 1558, 1571, 1809
Hin6I GCGC 3 cut(s) 296, 1378, 1945
HinP1I GCGC 3 cut(s) 296, 1378, 1945
HincII GTYRAC 3 cut(s) 420, 1360, 1669
HindII GTYRAC 3 cut(s) 420, 1360, 1669
HindIII AAGCTT 1 cut(s) 734
HinfI GANTC 6 cut(s) 77, 86, 107, 140, 1186, 1906
HpaI GTTAAC 1 cut(s) 1669
HpaII CCGG 3 cut(s) 429, 1619, 1672
HphI GGTGA 7 cut(s) 632, 703, 1069, 1193, 1205, 1235, 1831
Hpy166II GTNNAC 6 cut(s) 340, 420, 723, 1360, 1471, 1669
Hpy188I TCNGA 8 cut(s) 28, 82, 570, 758, 937, 1290, 1648, 1911
Hpy188III TCNNGA 9 cut(s) 74, 196, 451, 674, 803, 953, 1241, 1414, 1489
Hpy8I GTNNAC 6 cut(s) 340, 420, 723, 1360, 1471, 1669
HpyAV CCTTC 3 cut(s) 10, 547, 1144
HpyCH4III ACNGT 4 cut(s) 127, 1102, 1444, 1637
HpyCH4IV ACGT 2 cut(s) 784, 1260
HpyF10VI GCNNNNNNNGC 9 cut(s) 271, 478, 520, 742, 914, 1276, 1384, 1556, 1975
HpyF3I CTNAG 4 cut(s) 506, 567, 1272, 1353
HpySE526I ACGT 2 cut(s) 784, 1260
Hsp92II CATG 9 cut(s) 264, 476, 552, 956, 1403, 1417, 1558, 1571, 1809
HspAI GCGC 3 cut(s) 296, 1378, 1945
KpnI GGTACC 1 cut(s) 1101
Ksp22I TGATCA 1 cut(s) 192
KspAI GTTAAC 1 cut(s) 1669
Kzo9I GATC 7 cut(s) 192, 312, 799, 856, 1615, 1643, 1693
LmnI GCTCC 3 cut(s) 639, 1139, 1276
Lsp1109I GCAGC 6 cut(s) 465, 1129, 1367, 1559, 1609, 1910
LweI GCATC 2 cut(s) 1148, 1186
MaeI CTAG 4 cut(s) 626, 665, 884, 1425
MaeII ACGT 2 cut(s) 784, 1260
MaeIII GTNAC 6 cut(s) 127, 223, 540, 562, 1256, 1576
MalI GATC 7 cut(s) 194, 314, 801, 858, 1617, 1645, 1695
MboI GATC 7 cut(s) 192, 312, 799, 856, 1615, 1643, 1693
MflI RGATCY 1 cut(s) 856
MhlI GDGCHC 2 cut(s) 1374, 1817
MlsI TGGCCA 1 cut(s) 1533
MluNI TGGCCA 1 cut(s) 1533
MlyI GAGTC 3 cut(s) 86, 95, 1900
MmeI TCCRAC 3 cut(s) 582, 682, 789
Mox20I TGGCCA 1 cut(s) 1533
Mph1103I ATGCAT 1 cut(s) 532
MroXI GAANNNNTTC 2 cut(s) 1023, 1236
MscI TGGCCA 1 cut(s) 1533
MseI TTAA 7 cut(s) 461, 732, 776, 863, 1122, 1668, 1833
MslI CAYNNNNRTG 4 cut(s) 287, 1425, 1566, 1952
Msp20I TGGCCA 1 cut(s) 1533
MspI CCGG 3 cut(s) 429, 1619, 1672
MspR9I CCNGG 2 cut(s) 377, 1722
Mva1269I GAATGC 2 cut(s) 294, 530
MvaI CCWGG 2 cut(s) 377, 1722
MvnI CGCG 1 cut(s) 298
MwoI GCNNNNNNNGC 9 cut(s) 271, 478, 520, 742, 914, 1276, 1384, 1556, 1975
NcoI CCATGG 1 cut(s) 548
NdeI CATATG 2 cut(s) 1052, 1748
NdeII GATC 7 cut(s) 192, 312, 799, 856, 1615, 1643, 1693
NlaIII CATG 9 cut(s) 264, 476, 552, 956, 1403, 1417, 1558, 1571, 1809
NlaIV GGNNCC 7 cut(s) 7, 309, 396, 1099, 1657, 1776, 1872
NmuCI GTSAC 3 cut(s) 127, 223, 1256
NsbI TGCGCA 1 cut(s) 1946
NsiI ATGCAT 1 cut(s) 532
NspI RCATGY 2 cut(s) 476, 1403
PaeR7I CTCGAG 1 cut(s) 74
PagI TCATGA 2 cut(s) 952, 1413
PctI GAATGC 2 cut(s) 294, 530
PdmI GAANNNNTTC 2 cut(s) 1023, 1236
PfeI GAWTC 3 cut(s) 107, 140, 1186
PflFI GACNNNGTC 1 cut(s) 125
PfoI TCCNGGA 1 cut(s) 375
PinAI ACCGGT 1 cut(s) 1671
PkrI GCNGC 6 cut(s) 480, 1144, 1382, 1549, 1624, 1900
PleI GAGTC 3 cut(s) 85, 94, 1900
PmaCI CACGTG 2 cut(s) 785, 1261
PmlI CACGTG 2 cut(s) 785, 1261
PpsI GAGTC 3 cut(s) 85, 94, 1900
Ppu21I YACGTR 2 cut(s) 785, 1261
PshBI ATTAAT 2 cut(s) 776, 1122
Psp124BI GAGCTC 1 cut(s) 1817
Psp6I CCWGG 2 cut(s) 375, 1720
PspCI CACGTG 2 cut(s) 785, 1261
PspGI CCWGG 2 cut(s) 375, 1720
PspN4I GGNNCC 7 cut(s) 7, 309, 396, 1099, 1657, 1776, 1872
PspPI GGNCC 3 cut(s) 394, 1558, 1774
PstI CTGCAG 1 cut(s) 337
PsuI RGATCY 1 cut(s) 856
PsyI GACNNNGTC 1 cut(s) 125
RsaI GTAC 4 cut(s) 182, 1099, 1394, 1470
RsaNI GTAC 4 cut(s) 181, 1098, 1393, 1469
RseI CAYNNNNRTG 4 cut(s) 287, 1425, 1566, 1952
SacI GAGCTC 1 cut(s) 1817
SaqAI TTAA 7 cut(s) 461, 732, 776, 863, 1122, 1668, 1833
SatI GCNGC 6 cut(s) 479, 1143, 1381, 1548, 1623, 1899
Sau3AI GATC 7 cut(s) 192, 312, 799, 856, 1615, 1643, 1693
Sau96I GGNCC 3 cut(s) 394, 1558, 1774
SchI GAGTC 3 cut(s) 86, 95, 1900
ScrFI CCNGG 2 cut(s) 377, 1722
SduI GDGCHC 2 cut(s) 1374, 1817
SfaNI GCATC 2 cut(s) 1148, 1186
SfcI CTRYAG 3 cut(s) 333, 1215, 1979
Sfr274I CTCGAG 1 cut(s) 74
SinI GGWCC 1 cut(s) 1774
SlaI CTCGAG 1 cut(s) 74
SmiMI CAYNNNNRTG 4 cut(s) 287, 1425, 1566, 1952
SmlI CTYRAG 2 cut(s) 74, 657
SmoI CTYRAG 2 cut(s) 74, 657
SpeI ACTAGT 1 cut(s) 1424
SsiI CCGC 2 cut(s) 1220, 1829
SspMI CTAG 4 cut(s) 626, 665, 884, 1425
SstI GAGCTC 1 cut(s) 1817
StyD4I CCNGG 2 cut(s) 375, 1720
StyI CCWWGG 3 cut(s) 548, 765, 1534
TaaI ACNGT 4 cut(s) 127, 1102, 1444, 1637
TaiI ACGT 2 cut(s) 787, 1263
TaqI TCGA 4 cut(s) 75, 1107, 1240, 1596
TatI WGTACW 2 cut(s) 180, 1392
TfiI GAWTC 3 cut(s) 107, 140, 1186
Tru1I TTAA 7 cut(s) 461, 732, 776, 863, 1122, 1668, 1833
Tru9I TTAA 7 cut(s) 461, 732, 776, 863, 1122, 1668, 1833
TscAI CASTG 6 cut(s) 51, 142, 238, 342, 1071, 1179
TseFI GTSAC 3 cut(s) 127, 223, 1256
TseI GCWGC 6 cut(s) 478, 1142, 1380, 1547, 1622, 1898
Tsp45I GTSAC 3 cut(s) 127, 223, 1256
TspDTI ATGAA 6 cut(s) 523, 609, 941, 1430, 1474, 1584
TspGWI ACGGA 2 cut(s) 708, 1881
TspRI CASTG 6 cut(s) 51, 142, 238, 342, 1071, 1179
Tth111I GACNNNGTC 1 cut(s) 125
VpaK11BI GGWCC 1 cut(s) 1774
VspI ATTAAT 2 cut(s) 776, 1122
XapI RAATTY 3 cut(s) 360, 557, 970
XceI RCATGY 2 cut(s) 476, 1403
XcmI CCANNNNNNNNNTGG 1 cut(s) 1728
XhoI CTCGAG 1 cut(s) 74
XmnI GAANNNNTTC 2 cut(s) 1023, 1236
XspI CTAG 4 cut(s) 626, 665, 884, 1425
Zsp2I ATGCAT 1 cut(s) 532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.