Rmu_sc0001659.1_g000042

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001659.1
OG0000290
Physical Location & Seq
Forward (+)
157706 .. 162782
5077 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001659.1_g000042.1.cds

Sequence Viewer

Length: 1641 bp
atgaacatattgcaggtagcaatgggttccaagaagggaattcgcaaatctccaagaggcaaaaaatcaaagaaaaagaaagatgaggagacttctcaacctaagactgatgaagtgcttgaagaaaaagacgattctgtatcagccaacaccgtcacgagcactgaatcagctgctgctagagggaagcgaaatgtggttgccatgtataaggtcttggtcaagaaagctttgggaaaaaagtttaaagtgacatacaccgacacgagcaatctaaatggatcaataaggcacactctacagtcttatataggaatgttggcgcggactaaggtgcccatcaacattgtaagcaggcccgacgtggacggtgacttgaaggataaactttggctcgatgttaaggatacattcaaggtcgcccctgaaagtaagaaactggtattgacatctgctggcactaaatggagagcattcaagaccatgttaacaagaaaatatgtgctcccatacttgggaaagaagaagaagttgagaaagccaccaagtcaatatgcatttgttgggaagcagccatggaggcaatttgtgaaagagaggactactgagaaatggctgttggagaagaaaagtaagggtgagcttgagatttcagggagtagtgatgttctttctcaagcattagaaactcctgaacactcgggcagggtgaggggtgttggaggcttcatcaatccctccacatactttaaacttccgaagctgaaaaggattagaattaccaaggcagacttactagcacgtgatagagagcatgatagagagttggaagagacaaagaaaatgctcactacaaagcaagcaaaggcagaagagctcttaaataaaaggattgctgcattagaagcaatgataacagggaagacacccaacactccacctttgaatgtccatgttgtgggagactgtagaatttcccctatattggataaaggaagtatccatgatagaacactaaatacctcaaataatcttgatgaagccaaggtgaaagaagaggttcaggactgcgaggttgttcctccccctactgaaatggaggggtgtgttagggtgttagtggatggggtcattcaagctgaaacacgacttcctttcccagtggagggtgagatgggattggttggccaagctgttggaagtcatgtggcttggcctgaggagcttgttattcgaagagtgaataagccacataactgtgagagatcgggatttggtccttacttagtggatcggttgaaagagggaaaggctgatcgtatattctttatgccatacaatccgggggaacattggattttgacaaccatttgggaggatgaagtctacatcttagaccctttgccaaaaccggtccattacacggcatgggaaactgcagtgatgaatgcggttaaaagttacaatgctgaaaaggggagggctaacaaagtgcccaaattgactactcccgcactgatgggaggtggaggattgttagaactaatcggtgcctgggcgtgtgaactagacgtgtcttcgccaatagcggaggatccttccccagcttatctagacgacctacgacgaacctgtaaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 Transposase_24

Protein Analysis

546

Amino Acids

61.13

Weight (kDa)

9.46

Isoelectric Point (pI)

37.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000290)

Species Orthologous Gene IDs
prunus_persica Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0352291 RchiOBHm_Chr1g0352301 RchiOBHm_Chr2g0145261 RchiOBHm_Chr2g0160781 RchiOBHm_Chr2g0160871 RchiOBHm_Chr3g0460901 RchiOBHm_Chr3g0494431 RchiOBHm_Chr3g0494441 RchiOBHm_Chr4g0385451 RchiOBHm_Chr4g0417051 RchiOBHm_Chr4g0424111 RchiOBHm_Chr5g0035911 RchiOBHm_Chr6g0269251 RchiOBHm_Chr6g0274141 RchiOBHm_Chr7g0191841 RchiOBHm_Chr7g0196691 RchiOBHm_Chr7g0211271 RchiOBHm_Chr7g0227321 RchiOBHm_Chr7g0242811
rosa_laevigata RLG00000013212
rosa_multiflora Rmu_co8387591.1_g000001 Rmu_sc0000147.1_g000094 Rmu_sc0000340.1_g000034 Rmu_sc0000546.1_g000048 Rmu_sc0001461.1_g000092 Rmu_sc0001659.1_g000042 Rmu_sc0002460.1_g000027 Rmu_sc0003170.1_g000021 Rmu_sc0004301.1_g000015 Rmu_sc0004344.1_g000009 Rmu_sc0005539.1_g000024 Rmu_sc0006803.1_g000018 Rmu_sc0006888.1_g000057 Rmu_sc0009330.1_g000004 Rmu_sc0010704.1_g000001 Rmu_sc0012787.1_g000002 Rmu_sc0023684.1_g000002 Rmu_ssc0000189.1_g000010
rosa_roxburghii Rroxscaffold_5G00377480 Rroxscaffold_6G00389290 Rroxscaffold_6G00414410 Rroxscaffold_7G00202010
rosa_rugosa Rorug01G0242100 Rorug02G0188500 Rorug02G0273900 Rorug03G0342600 Rorug05G0239000 Rorug07G0163300 Rorug07G0192100
rosa_samantha Rh1BG091000 Rh1BG200300 Rh1DG228100 Rh2AG268900 Rh2AG431600 Rh2AG508400 Rh2CG258700 Rh2CG417500 Rh2CG493900 Rh3AG323800 Rh3BG237800 Rh3CG306700 Rh3DG204700 Rh3DG259400 Rh4AG203100 Rh4AG377200 Rh4BG054300 Rh4BG125100 Rh4BG146000 Rh4BG251900 Rh4DG132500 Rh4DG155000 Rh4DG384000 Rh5BG230700 Rh5CG382700 Rh5CG532300 Rh5DG235600 Rh5DG259700 Rh5DG320000 Rh6AG162900 Rh6CG065400 Rh6CG065500 Rh6CG307600 Rh6CG310500 Rh6CG391900 Rh6DG062500 Rh6DG062600 Rh6DG187500 Rh7BG296200 Rh7DG266900 Rh7DG322300
rosa_wichuraiana Rw2G018510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 4
AccB1I GGYRCC 2 cut(s) 334, 1550
AccB7I CCANNNNNTGG 1 cut(s) 958
AccI GTMKAC 1 cut(s) 1386
AccII CGCG 1 cut(s) 325
AciI CCGC 4 cut(s) 325, 1451, 1512, 1589
AclWI GGATC 4 cut(s) 289, 1299, 1589, 1602
AcoI YGGCCR 1 cut(s) 1186
AcsI RAATTY 2 cut(s) 39, 972
AcvI CACGTG 1 cut(s) 803
AfiI CCNNNNNNNGG 7 cut(s) 514, 515, 958, 985, 1165, 1166, 1423
AflIII ACRYGT 1 cut(s) 1572
AgeI ACCGGT 1 cut(s) 1411
AgsI TTSAA 7 cut(s) 122, 379, 415, 478, 946, 1136, 1300
AjiI CACGTC 2 cut(s) 364, 1573
AjnI CCWGG 1 cut(s) 1553
AjuI GAANNNNNNNTTGG 2 cut(s) 602, 634
AluBI AGCT 9 cut(s) 173, 230, 643, 763, 877, 1139, 1193, 1225, 1607
AluI AGCT 9 cut(s) 173, 230, 643, 763, 877, 1139, 1193, 1225, 1607
Alw21I GWGCWC 3 cut(s) 164, 507, 879
Alw26I GTCTC 3 cut(s) 83, 827, 957
AlwI GGATC 4 cut(s) 289, 1299, 1589, 1602
AlwNI CAGNNNCTG 1 cut(s) 176
Ama87I CYCGRG 1 cut(s) 700
AoxI GGCC 3 cut(s) 356, 1186, 1214
ApeKI GCWGC 4 cut(s) 173, 176, 571, 896
ApoI RAATTY 2 cut(s) 39, 972
AsiGI ACCGGT 1 cut(s) 1411
Asp700I GAANNNNTTC 1 cut(s) 1059
AspLEI GCGC 1 cut(s) 325
AspS9I GGNCC 3 cut(s) 357, 1277, 1414
AsuC2I CCSGG 1 cut(s) 1344
AsuHPI GGTGA 5 cut(s) 383, 650, 721, 1060, 1181
AsuII TTCGAA 1 cut(s) 1234
AvaI CYCGRG 1 cut(s) 700
AvaII GGWCC 2 cut(s) 1277, 1414
AxyI CCTNAGG 1 cut(s) 1218
BaeGI GKGCMC 2 cut(s) 339, 1497
BalI TGGCCA 1 cut(s) 1188
BamHI GGATCC 1 cut(s) 1594
BanI GGYRCC 2 cut(s) 334, 1550
BanII GRGCYC 1 cut(s) 879
BauI CACGAG 2 cut(s) 157, 265
BbrPI CACGTG 1 cut(s) 803
BbsI GAAGAC 2 cut(s) 929, 1569
Bbv12I GWGCWC 3 cut(s) 164, 507, 879
BbvI GCAGC 4 cut(s) 160, 163, 583, 883
BccI CCATC 4 cut(s) 347, 1118, 1168, 1513
BceAI ACGGC 1 cut(s) 1440
BciT130I CCWGG 1 cut(s) 1555
BciVI GTATCC 2 cut(s) 400, 1010
BcnI CCSGG 1 cut(s) 1344
BcoDI GTCTC 3 cut(s) 83, 827, 957
BfaI CTAG 4 cut(s) 180, 797, 1568, 1613
BfmI CTRYAG 3 cut(s) 299, 967, 1437
BfuAI ACCTGC 1 cut(s) 4
BfuI GTATCC 2 cut(s) 400, 1010
BglI GCCNNNNNGGC 1 cut(s) 580
BisI GCNGC 4 cut(s) 174, 177, 572, 897
BlsI GCNGC 4 cut(s) 175, 178, 573, 898
Bme1390I CCNGG 2 cut(s) 1344, 1555
Bme18I GGWCC 2 cut(s) 1277, 1414
BmeT110I CYCGRG 1 cut(s) 700
BmgBI CACGTC 2 cut(s) 364, 1573
BmgT120I GGNCC 3 cut(s) 357, 1277, 1414
BmiI GGNNCC 4 cut(s) 28, 336, 1552, 1596
BmrFI CCNGG 2 cut(s) 1344, 1555
BmrI ACTGGG 1 cut(s) 1154
BmuI ACTGGG 1 cut(s) 1154
BpiI GAAGAC 2 cut(s) 929, 1569
Bpu14I TTCGAA 1 cut(s) 1234
BpuEI CTTGAG 2 cut(s) 660, 665
BpuMI CCSGG 1 cut(s) 1344
BsaAI YACGTR 1 cut(s) 803
BsaJI CCNNGG 5 cut(s) 575, 783, 1044, 1343, 1554
BsaWI WCCGGW 1 cut(s) 1411
Bsc4I CCNNNNNNNGG 7 cut(s) 514, 515, 958, 985, 1165, 1166, 1423
Bse118I RCCGGY 1 cut(s) 1411
Bse1I ACTGG 2 cut(s) 444, 1160
Bse21I CCTNAGG 1 cut(s) 1218
Bse3DI GCAATG 2 cut(s) 27, 915
BseBI CCWGG 1 cut(s) 1555
BseDI CCNNGG 5 cut(s) 575, 783, 1044, 1343, 1554
BseGI GGATG 2 cut(s) 1129, 1384
BseLI CCNNNNNNNGG 7 cut(s) 514, 515, 958, 985, 1165, 1166, 1423
BseMI GCAATG 2 cut(s) 27, 915
BseMII CTCAG 2 cut(s) 597, 1209
BseNI ACTGG 2 cut(s) 444, 1160
BseRI GAGGAG 2 cut(s) 101, 1235
BseSI GKGCMC 2 cut(s) 339, 1497
BseXI GCAGC 4 cut(s) 160, 163, 583, 883
BseYI CCCAGC 1 cut(s) 1603
Bsh1236I CGCG 1 cut(s) 325
BshFI GGCC 3 cut(s) 358, 1188, 1216
BshNI GGYRCC 2 cut(s) 334, 1550
BshTI ACCGGT 1 cut(s) 1411
BsiHKAI GWGCWC 3 cut(s) 164, 507, 879
BsiHKCI CYCGRG 1 cut(s) 700
BsiSI CCGG 2 cut(s) 1343, 1412
BslI CCNNNNNNNGG 7 cut(s) 514, 515, 958, 985, 1165, 1166, 1423
BsmAI GTCTC 3 cut(s) 83, 827, 957
BsmI GAATGC 2 cut(s) 473, 1453
BsnI GGCC 3 cut(s) 358, 1188, 1216
BsoBI CYCGRG 1 cut(s) 700
Bsp119I TTCGAA 1 cut(s) 1234
Bsp1286I GDGCHC 5 cut(s) 164, 339, 507, 879, 1497
Bsp143I GATC 5 cut(s) 281, 1265, 1291, 1315, 1594
Bsp19I CCATGG 1 cut(s) 575
BspACI CCGC 4 cut(s) 325, 1451, 1512, 1589
BspANI GGCC 3 cut(s) 358, 1188, 1216
BspCNI CTCAG 2 cut(s) 598, 1210
BspFNI CGCG 1 cut(s) 325
BspLI GGNNCC 4 cut(s) 28, 336, 1552, 1596
BspMAI CTGCAG 1 cut(s) 1441
BspMI ACCTGC 1 cut(s) 4
BspPI GGATC 4 cut(s) 289, 1299, 1589, 1602
BspQI GCTCTTC 1 cut(s) 867
BspT104I TTCGAA 1 cut(s) 1234
BspT107I GGYRCC 2 cut(s) 334, 1550
BsrDI GCAATG 2 cut(s) 27, 915
BsrFI RCCGGY 1 cut(s) 1411
BsrI ACTGG 2 cut(s) 444, 1160
BssAI RCCGGY 1 cut(s) 1411
BssECI CCNNGG 5 cut(s) 575, 783, 1044, 1343, 1554
BssMI GATC 5 cut(s) 281, 1265, 1291, 1315, 1594
BssSI CACGAG 2 cut(s) 157, 265
BssT1I CCWWGG 3 cut(s) 575, 783, 1044
Bst2BI CACGAG 2 cut(s) 157, 265
Bst2UI CCWGG 1 cut(s) 1555
Bst4CI ACNGT 5 cut(s) 154, 303, 371, 968, 1259
Bst6I CTCTTC 4 cut(s) 825, 867, 1050, 1231
BstBAI YACGTR 1 cut(s) 803
BstBI TTCGAA 1 cut(s) 1234
BstC8I GCNNGC 3 cut(s) 356, 457, 861
BstDEI CTNAG 6 cut(s) 102, 330, 606, 1218, 1285, 1393
BstDSI CCRYGG 1 cut(s) 575
BstF5I GGATG 2 cut(s) 1129, 1384
BstFNI CGCG 1 cut(s) 325
BstHHI GCGC 1 cut(s) 325
BstKTI GATC 5 cut(s) 284, 1268, 1294, 1318, 1597
BstMAI GTCTC 3 cut(s) 83, 827, 957
BstMBI GATC 5 cut(s) 281, 1265, 1291, 1315, 1594
BstMWI GCNNNNNNNGC 3 cut(s) 580, 905, 1222
BstNI CCWGG 1 cut(s) 1555
BstSCI CCNGG 2 cut(s) 1342, 1553
BstSFI CTRYAG 3 cut(s) 299, 967, 1437
BstSLI GKGCMC 2 cut(s) 339, 1497
BstUI CGCG 1 cut(s) 325
BstV1I GCAGC 4 cut(s) 160, 163, 583, 883
BstV2I GAAGAC 2 cut(s) 929, 1569
BstX2I RGATCY 1 cut(s) 1594
BstXI CCANNNNNNTGG 1 cut(s) 1196
BstYI RGATCY 1 cut(s) 1594
Bsu36I CCTNAGG 1 cut(s) 1218
BsuI GTATCC 2 cut(s) 400, 1010
BsuRI GGCC 3 cut(s) 358, 1188, 1216
BtgI CCRYGG 1 cut(s) 575
BtrI CACGTC 2 cut(s) 364, 1573
BtsCI GGATG 2 cut(s) 1129, 1384
BtsI GCAGTG 1 cut(s) 1446
BtsIMutI CAGTG 4 cut(s) 162, 1167, 1446, 1514
BveI ACCTGC 1 cut(s) 4
Cac8I GCNNGC 3 cut(s) 356, 457, 861
CaiI CAGNNNCTG 1 cut(s) 176
CfoI GCGC 1 cut(s) 325
Cfr10I RCCGGY 1 cut(s) 1411
Cfr13I GGNCC 3 cut(s) 357, 1277, 1414
CspAI ACCGGT 1 cut(s) 1411
CviAII CATG 8 cut(s) 205, 484, 576, 815, 953, 1004, 1205, 1428
DdeI CTNAG 6 cut(s) 102, 330, 606, 1218, 1285, 1393
DpnI GATC 5 cut(s) 283, 1267, 1293, 1317, 1596
DpnII GATC 5 cut(s) 281, 1265, 1291, 1315, 1594
DraI TTTAAA 2 cut(s) 247, 751
EaeI YGGCCR 1 cut(s) 1186
Eam1104I CTCTTC 4 cut(s) 825, 867, 1050, 1231
EarI CTCTTC 4 cut(s) 825, 867, 1050, 1231
Ecl136II GAGCTC 1 cut(s) 877
Eco130I CCWWGG 3 cut(s) 575, 783, 1044
Eco24I GRGCYC 1 cut(s) 879
Eco47I GGWCC 2 cut(s) 1277, 1414
Eco53kI GAGCTC 1 cut(s) 877
Eco72I CACGTG 1 cut(s) 803
Eco81I CCTNAGG 1 cut(s) 1218
Eco88I CYCGRG 1 cut(s) 700
EcoICRI GAGCTC 1 cut(s) 877
EcoRI GAATTC 1 cut(s) 39
EcoRII CCWGG 1 cut(s) 1553
EcoT14I CCWWGG 3 cut(s) 575, 783, 1044
EcoT22I ATGCAT 1 cut(s) 559
EcoT38I GRGCYC 1 cut(s) 879
ErhI CCWWGG 3 cut(s) 575, 783, 1044
FaeI CATG 8 cut(s) 208, 487, 579, 818, 956, 1007, 1208, 1431
FalI AAGNNNNNCTT 2 cut(s) 776, 808
FatI CATG 8 cut(s) 204, 483, 575, 814, 952, 1003, 1204, 1427
FauI CCCGC 1 cut(s) 1519
FblI GTMKAC 1 cut(s) 1386
Fnu4HI GCNGC 4 cut(s) 174, 177, 572, 897
FokI GGATG 2 cut(s) 1136, 1391
FriOI GRGCYC 1 cut(s) 879
Fsp4HI GCNGC 4 cut(s) 174, 177, 572, 897
FspBI CTAG 4 cut(s) 180, 797, 1568, 1613
GlaI GCGC 1 cut(s) 324
GluI GCNGC 4 cut(s) 174, 177, 572, 897
GsaI CCCAGC 1 cut(s) 1607
HaeIII GGCC 3 cut(s) 358, 1188, 1216
HapII CCGG 2 cut(s) 1343, 1412
HhaI GCGC 1 cut(s) 325
Hin1II CATG 8 cut(s) 208, 487, 579, 818, 956, 1007, 1208, 1431
Hin6I GCGC 1 cut(s) 323
HinP1I GCGC 1 cut(s) 323
HincII GTYRAC 1 cut(s) 489
HindII GTYRAC 1 cut(s) 489
HindIII AAGCTT 1 cut(s) 228
HinfI GANTC 2 cut(s) 134, 167
HpaI GTTAAC 1 cut(s) 489
HpaII CCGG 2 cut(s) 1343, 1412
HphI GGTGA 5 cut(s) 383, 650, 721, 1060, 1181
Hpy166II GTNNAC 4 cut(s) 367, 489, 1387, 1565
Hpy188I TCNGA 1 cut(s) 759
Hpy188III TCNNGA 8 cut(s) 157, 223, 478, 692, 1034, 1064, 1269, 1613
Hpy8I GTNNAC 4 cut(s) 367, 489, 1387, 1565
Hpy99I CGWCG 2 cut(s) 365, 1629
HpyAV CCTTC 3 cut(s) 28, 373, 1608
HpyCH4III ACNGT 5 cut(s) 154, 303, 371, 968, 1259
HpyCH4IV ACGT 3 cut(s) 363, 802, 1572
HpyCH4V TGCA 4 cut(s) 13, 557, 899, 1439
HpyF10VI GCNNNNNNNGC 3 cut(s) 580, 905, 1222
HpyF3I CTNAG 6 cut(s) 102, 330, 606, 1218, 1285, 1393
HpySE526I ACGT 3 cut(s) 363, 802, 1572
Hsp92II CATG 8 cut(s) 208, 487, 579, 818, 956, 1007, 1208, 1431
HspAI GCGC 1 cut(s) 323
KspAI GTTAAC 1 cut(s) 489
Kzo9I GATC 5 cut(s) 281, 1265, 1291, 1315, 1594
LguI GCTCTTC 1 cut(s) 867
LmnI GCTCC 2 cut(s) 510, 1222
Lsp1109I GCAGC 4 cut(s) 160, 163, 583, 883
MaeI CTAG 4 cut(s) 180, 797, 1568, 1613
MaeII ACGT 3 cut(s) 363, 802, 1572
MaeIII GTNAC 4 cut(s) 154, 250, 371, 1460
MalI GATC 5 cut(s) 283, 1267, 1293, 1317, 1596
MboI GATC 5 cut(s) 281, 1265, 1291, 1315, 1594
MflI RGATCY 1 cut(s) 1594
MhlI GDGCHC 5 cut(s) 164, 339, 507, 879, 1497
MlsI TGGCCA 1 cut(s) 1188
MluCI AATT 5 cut(s) 39, 584, 777, 972, 1499
MluNI TGGCCA 1 cut(s) 1188
MmeI TCCRAC 4 cut(s) 600, 700, 807, 1177
Mox20I TGGCCA 1 cut(s) 1188
Mph1103I ATGCAT 1 cut(s) 559
MroXI GAANNNNTTC 1 cut(s) 1059
MscI TGGCCA 1 cut(s) 1188
MseI TTAA 6 cut(s) 246, 402, 488, 750, 881, 1455
MslI CAYNNNNRTG 1 cut(s) 1257
Msp20I TGGCCA 1 cut(s) 1188
MspA1I CMGCKG 1 cut(s) 173
MspI CCGG 2 cut(s) 1343, 1412
MspR9I CCNGG 2 cut(s) 1344, 1555
Mva1269I GAATGC 2 cut(s) 473, 1453
MvaI CCWGG 1 cut(s) 1555
MvnI CGCG 1 cut(s) 325
MwoI GCNNNNNNNGC 3 cut(s) 580, 905, 1222
NciI CCSGG 1 cut(s) 1344
NcoI CCATGG 1 cut(s) 575
NdeII GATC 5 cut(s) 281, 1265, 1291, 1315, 1594
NlaIII CATG 8 cut(s) 208, 487, 579, 818, 956, 1007, 1208, 1431
NlaIV GGNNCC 4 cut(s) 28, 336, 1552, 1596
NmuCI GTSAC 3 cut(s) 154, 250, 371
NsiI ATGCAT 1 cut(s) 559
NspV TTCGAA 1 cut(s) 1234
PciSI GCTCTTC 1 cut(s) 867
PctI GAATGC 2 cut(s) 473, 1453
PdmI GAANNNNTTC 1 cut(s) 1059
PfeI GAWTC 2 cut(s) 134, 167
PflMI CCANNNNNTGG 1 cut(s) 958
PinAI ACCGGT 1 cut(s) 1411
PkrI GCNGC 4 cut(s) 175, 178, 573, 898
PmaCI CACGTG 1 cut(s) 803
PmlI CACGTG 1 cut(s) 803
Ppu21I YACGTR 1 cut(s) 803
Psp124BI GAGCTC 1 cut(s) 879
Psp6I CCWGG 1 cut(s) 1553
PspCI CACGTG 1 cut(s) 803
PspFI CCCAGC 1 cut(s) 1603
PspGI CCWGG 1 cut(s) 1553
PspN4I GGNNCC 4 cut(s) 28, 336, 1552, 1596
PspPI GGNCC 3 cut(s) 357, 1277, 1414
PsrI GAACNNNNNNTAC 2 cut(s) 1003, 1035
PstI CTGCAG 1 cut(s) 1441
PstNI CAGNNNCTG 1 cut(s) 176
PsuI RGATCY 1 cut(s) 1594
PvuII CAGCTG 1 cut(s) 173
RseI CAYNNNNRTG 1 cut(s) 1257
SacI GAGCTC 1 cut(s) 879
SapI GCTCTTC 1 cut(s) 867
SaqAI TTAA 6 cut(s) 246, 402, 488, 750, 881, 1455
SatI GCNGC 4 cut(s) 174, 177, 572, 897
Sau3AI GATC 5 cut(s) 281, 1265, 1291, 1315, 1594
Sau96I GGNCC 3 cut(s) 357, 1277, 1414
ScrFI CCNGG 2 cut(s) 1344, 1555
SduI GDGCHC 5 cut(s) 164, 339, 507, 879, 1497
SfcI CTRYAG 3 cut(s) 299, 967, 1437
SfuI TTCGAA 1 cut(s) 1234
SinI GGWCC 2 cut(s) 1277, 1414
SmiMI CAYNNNNRTG 1 cut(s) 1257
SmlI CTYRAG 2 cut(s) 644, 675
SmoI CTYRAG 2 cut(s) 644, 675
Sse9I AATT 5 cut(s) 39, 584, 777, 972, 1499
SsiI CCGC 4 cut(s) 325, 1451, 1512, 1589
SspMI CTAG 4 cut(s) 180, 797, 1568, 1613
SstI GAGCTC 1 cut(s) 879
StyD4I CCNGG 2 cut(s) 1342, 1553
StyI CCWWGG 3 cut(s) 575, 783, 1044
TaaI ACNGT 5 cut(s) 154, 303, 371, 968, 1259
TaiI ACGT 3 cut(s) 366, 805, 1575
TaqI TCGA 2 cut(s) 396, 1234
TasI AATT 5 cut(s) 39, 584, 777, 972, 1499
TfiI GAWTC 2 cut(s) 134, 167
Tru1I TTAA 6 cut(s) 246, 402, 488, 750, 881, 1455
Tru9I TTAA 6 cut(s) 246, 402, 488, 750, 881, 1455
TscAI CASTG 4 cut(s) 169, 1167, 1446, 1521
TseFI GTSAC 3 cut(s) 154, 250, 371
TseI GCWGC 4 cut(s) 173, 176, 571, 896
Tsp45I GTSAC 3 cut(s) 154, 250, 371
TspDTI ATGAA 6 cut(s) 17, 126, 718, 1053, 1395, 1460
TspRI CASTG 4 cut(s) 169, 1167, 1446, 1521
Van91I CCANNNNNTGG 1 cut(s) 958
VpaK11BI GGWCC 2 cut(s) 1277, 1414
XapI RAATTY 2 cut(s) 39, 972
XbaI TCTAGA 1 cut(s) 1612
XmiI GTMKAC 1 cut(s) 1386
XmnI GAANNNNTTC 1 cut(s) 1059
XspI CTAG 4 cut(s) 180, 797, 1568, 1613
Zsp2I ATGCAT 1 cut(s) 559
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.