Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0000290

Physical Location & Seq

Genomic Coordinates Forward (+)

31513941 .. 31538159

Gene Structure 24219 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG268900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1218 bp

ATGGTTTCCAAGAAGAGAAAGGCTAATAGTGAGAAAAAATCAAAGAATGATGCTGATCGAACCACTAGTGAACCTGATATTGATGAGGTGCATGATGGGAAAGGAGAATCTGCATCAGCTGACACAATTACAAGCACTGAATCAAGTAAAATAAGAGGGAAGCGAAGTGTTGTGCAAATGTATAAGGTACTGATCAAGAAAGCGTTGGGGAAAAAATTTAAAGTGGCGTACAATGACACTGGTAATCCAAGTGGACGACAACGGCCCACTCTACAGTCATACATAGGAATGCTAGTGCGGAAAATGGTGCCCATTAACATAGAAAGCTGGCCCGAAGTCGACCGTGATGAGAAAGACAAACTTTGGATCGACGTTCAGAAACTTCATCATGAACAAAGTCAGCGAGTGAAGAAGAGAAAATATCATCACAAATTATCAAGAAAGGGTTATATTGGACTAGAGGAGGAATTGAGAGAGACTTGGCCTGAAGGAGAGGTAATTGATCGTGCAGTGTTATGGAAGAAAGCTCGTGTACCTAAAAATGGGAAGATAGATGAGGAGGTGACACCAATAGCATCAAAAATTATCGCTTCGTTTTCTTCATCGGAATCCATGGCGAAACAACCAGCTCGCGTCCTCGTTACCAGAGCCACAGGTGAAATCGGGTATGCTCTTGTACCTATGATCGCAAAAGGAGTGATGCTCGGAGCTGACCAGCCCGTGATCCTTCACCTTCTTGATGAACCATTCACTGCTGAAGCATTGAATGGTGTCAAGATGGAGTTGATCGATGCTGCTTTCCCTCTTCTCAAAGGTGTTGTTGCTACATCTGATGTTGTGAAGGCATGCACTGGAGTCAACATTGCAGTCATAGTTGGTGGCTTCCCAGGGAAAGAGGGCATGGTAAAGAAAGATGTCCTTTCAGAGAAAGATGCTATCTCCATTCGCGGAGCCGCAGTTCGCGAGAGCAAAAACGTCAAGTTTTGTTGCTATTGGTTGATTATAAAGTTGCTGGAAGGTTCAAGGATAACTACGTTGCCTGTAAAAGCAGCTCTTAGACCCACTTATAAGTGTGAGTGTGCTGCTGCTGCAGGTGAGAGTATCACTAGGTCCTCAGTTATAGAGGAACCTGGAGACCATGGAGAAGCACACTTAGTAGCTCTGGGTGAATTAGAATTCCGTAAACAATTTCTAATATTAAGTGATGCTGGAGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0006107 GO:0006108 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006734 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009060 GO:0009117 GO:0009506 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010043 GO:0015980 GO:0016020 GO:0016491 GO:0016614 GO:0016615 GO:0016616 GO:0016999 GO:0017144 GO:0019362 GO:0019637 GO:0019674 GO:0019752 GO:0030054 GO:0030060 GO:0031090 GO:0034641 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045333 GO:0046483 GO:0046496 GO:0046686 GO:0048046 GO:0050896 GO:0051186 GO:0055044 GO:0055086 GO:0055114 GO:0071704 GO:0071944 GO:0072350 GO:0072524 GO:0098588 GO:0098805 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00020 ko00270 ko00620 ko00630 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko04964 map00020 map00270 map00620 map00630 map00710 map01100 map01110 map01120 map01130 map01200 map04964

Pfam Domains

Protein Families

Ldh_1_C Ldh_1_N

Protein Analysis

405

Amino Acids

44.59

Weight (kDa)

9.25

Isoelectric Point (pI)

42.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ldh_1_N	PF00056	211 - 313	3.4e-10	lactate/malate dehydrogenase, NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000290)

Species	Orthologous Gene IDs
prunus_persica	Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1 Prupe.7G026800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0352291 RchiOBHm_Chr1g0352301 RchiOBHm_Chr2g0145261 RchiOBHm_Chr2g0160781 RchiOBHm_Chr2g0160871 RchiOBHm_Chr3g0460901 RchiOBHm_Chr3g0494431 RchiOBHm_Chr3g0494441 RchiOBHm_Chr4g0385451 RchiOBHm_Chr4g0417051 RchiOBHm_Chr4g0424111 RchiOBHm_Chr5g0035911 RchiOBHm_Chr6g0269251 RchiOBHm_Chr6g0274141 RchiOBHm_Chr7g0191841 RchiOBHm_Chr7g0196691 RchiOBHm_Chr7g0211271 RchiOBHm_Chr7g0227321 RchiOBHm_Chr7g0242811
rosa_laevigata	RLG00000013212
rosa_multiflora	Rmu_co8387591.1_g000001 Rmu_sc0000147.1_g000094 Rmu_sc0000340.1_g000034 Rmu_sc0000546.1_g000048 Rmu_sc0001461.1_g000092 Rmu_sc0001659.1_g000042 Rmu_sc0002460.1_g000027 Rmu_sc0003170.1_g000021 Rmu_sc0004301.1_g000015 Rmu_sc0004344.1_g000009 Rmu_sc0005539.1_g000024 Rmu_sc0006803.1_g000018 Rmu_sc0006888.1_g000057 Rmu_sc0009330.1_g000004 Rmu_sc0010704.1_g000001 Rmu_sc0012787.1_g000002 Rmu_sc0023684.1_g000002 Rmu_ssc0000189.1_g000010
rosa_roxburghii	Rroxscaffold_5G00377480 Rroxscaffold_6G00389290 Rroxscaffold_6G00414410 Rroxscaffold_7G00202010
rosa_rugosa	Rorug01G0242100 Rorug02G0188500 Rorug02G0273900 Rorug03G0342600 Rorug05G0239000 Rorug07G0163300 Rorug07G0192100
rosa_samantha	Rh1BG091000 Rh1BG200300 Rh1DG228100 Rh2AG268900 Rh2AG431600 Rh2AG508400 Rh2CG258700 Rh2CG417500 Rh2CG493900 Rh3AG323800 Rh3BG237800 Rh3CG306700 Rh3DG204700 Rh3DG259400 Rh4AG203100 Rh4AG377200 Rh4BG054300 Rh4BG125100 Rh4BG146000 Rh4BG251900 Rh4DG132500 Rh4DG155000 Rh4DG384000 Rh5BG230700 Rh5CG382700 Rh5CG532300 Rh5DG235600 Rh5DG259700 Rh5DG320000 Rh6AG162900 Rh6CG065400 Rh6CG065500 Rh6CG307600 Rh6CG310500 Rh6CG391900 Rh6DG062500 Rh6DG062600 Rh6DG187500 Rh7BG296200 Rh7DG266900 Rh7DG322300
rosa_wichuraiana	Rw2G018510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1004, 1068
AarI	CACCTGC	1 cut(s)	1082
Acc36I	ACCTGC	1 cut(s)	1082
AccB1I	GGYRCC	1 cut(s)	307
AccI	GTMKAC	1 cut(s)	339
AccII	CGCG	3 cut(s)	633, 948, 963
AciI	CCGC	3 cut(s)	298, 948, 954
AclWI	GGATC	2 cut(s)	374, 718
AcsI	RAATTY	2 cut(s)	215, 1175
AcuI	CTGAAG	2 cut(s)	507, 777
AfaI	GTAC	4 cut(s)	189, 230, 534, 678
AfiI	CCNNNNNNNGG	1 cut(s)	542
AgsI	TTSAA	2 cut(s)	766, 1023
AhlI	ACTAGT	1 cut(s)	65
AjnI	CCWGG	2 cut(s)	886, 1129
AloI	GAACNNNNNNTCC	2 cut(s)	942, 974
AluBI	AGCT	7 cut(s)	119, 327, 527, 629, 710, 1052, 1160
AluI	AGCT	7 cut(s)	119, 327, 527, 629, 710, 1052, 1160
Alw26I	GTCTC	2 cut(s)	470, 1128
AlwI	GGATC	2 cut(s)	374, 718
AoxI	GGCC	3 cut(s)	263, 329, 482
ApeKI	GCWGC	5 cut(s)	794, 1049, 1082, 1085, 1088
ApoI	RAATTY	2 cut(s)	215, 1175
AspS9I	GGNCC	3 cut(s)	264, 330, 1110
AsuHPI	GGTGA	5 cut(s)	574, 668, 722, 1106, 1178
AvaII	GGWCC	1 cut(s)	1110
BaeGI	GKGCMC	1 cut(s)	312
BanI	GGYRCC	1 cut(s)	307
BauI	CACGAG	1 cut(s)	528
BbvI	GCAGC	5 cut(s)	781, 1061, 1069, 1072, 1075
BccI	CCATC	2 cut(s)	89, 772
BceAI	ACGGC	1 cut(s)	278
BciT130I	CCWGG	2 cut(s)	888, 1131
BclI	TGATCA	1 cut(s)	192
BcoDI	GTCTC	2 cut(s)	470, 1128
BcuI	ACTAGT	1 cut(s)	65
BfaI	CTAG	4 cut(s)	66, 293, 458, 1107
BfmI	CTRYAG	2 cut(s)	272, 1089
BfuAI	ACCTGC	1 cut(s)	1082
BisI	GCNGC	6 cut(s)	795, 954, 1050, 1083, 1086, 1089
BlsI	GCNGC	6 cut(s)	796, 955, 1051, 1084, 1087, 1090
Bme1390I	CCNGG	2 cut(s)	888, 1131
Bme18I	GGWCC	1 cut(s)	1110
BmgT120I	GGNCC	3 cut(s)	264, 330, 1110
BmiI	GGNNCC	3 cut(s)	309, 952, 1128
BmrFI	CCNGG	2 cut(s)	888, 1131
BmsI	GCATC	7 cut(s)	40, 122, 584, 690, 781, 922, 1195
BplI	GAGNNNNNCTC	2 cut(s)	687, 719
BpmI	CTGGAG	2 cut(s)	873, 1152
Bsa29I	ATCGAT	1 cut(s)	789
BsaBI	GATNNNNATC	1 cut(s)	54
BsaI	GGTCTC	1 cut(s)	1128
BsaJI	CCNNGG	4 cut(s)	612, 886, 887, 1138
BsaXI	ACNNNNNCTCC	2 cut(s)	942, 972
Bsc4I	CCNNNNNNNGG	1 cut(s)	542
Bse1I	ACTGG	2 cut(s)	244, 856
Bse3DI	GCAATG	1 cut(s)	861
Bse8I	GATNNNNATC	1 cut(s)	54
BseBI	CCWGG	2 cut(s)	888, 1131
BseCI	ATCGAT	1 cut(s)	789
BseDI	CCNNGG	4 cut(s)	612, 886, 887, 1138
BseJI	GATNNNNATC	1 cut(s)	54
BseLI	CCNNNNNNNGG	1 cut(s)	542
BseMI	GCAATG	1 cut(s)	861
BseMII	CTCAG	1 cut(s)	1128
BseNI	ACTGG	2 cut(s)	244, 856
BseRI	GAGGAG	2 cut(s)	476, 572
BseSI	GKGCMC	1 cut(s)	312
BseXI	GCAGC	5 cut(s)	781, 1061, 1069, 1072, 1075
BsgI	GTGCAG	1 cut(s)	528
Bsh1236I	CGCG	3 cut(s)	633, 948, 963
Bsh1285I	CGRYCG	1 cut(s)	343
BshFI	GGCC	3 cut(s)	265, 331, 484
BshNI	GGYRCC	1 cut(s)	307
BshVI	ATCGAT	1 cut(s)	789
BsiEI	CGRYCG	1 cut(s)	343
BslI	CCNNNNNNNGG	1 cut(s)	542
BsmAI	GTCTC	2 cut(s)	470, 1128
BsmI	GAATGC	1 cut(s)	294
BsnI	GGCC	3 cut(s)	265, 331, 484
Bso31I	GGTCTC	1 cut(s)	1128
Bsp1286I	GDGCHC	1 cut(s)	312
Bsp143I	GATC	7 cut(s)	55, 192, 366, 502, 684, 723, 786
Bsp19I	CCATGG	2 cut(s)	612, 1138
Bsp68I	TCGCGA	1 cut(s)	963
BspACI	CCGC	3 cut(s)	298, 948, 954
BspANI	GGCC	3 cut(s)	265, 331, 484
BspCNI	CTCAG	1 cut(s)	1127
BspDI	ATCGAT	1 cut(s)	789
BspFNI	CGCG	3 cut(s)	633, 948, 963
BspHI	TCATGA	1 cut(s)	388
BspLI	GGNNCC	3 cut(s)	309, 952, 1128
BspMAI	CTGCAG	1 cut(s)	1093
BspMI	ACCTGC	1 cut(s)	1082
BspPI	GGATC	2 cut(s)	374, 718
BspT107I	GGYRCC	1 cut(s)	307
BspTNI	GGTCTC	1 cut(s)	1128
BsrDI	GCAATG	1 cut(s)	861
BsrI	ACTGG	2 cut(s)	244, 856
BssECI	CCNNGG	4 cut(s)	612, 886, 887, 1138
BssMI	GATC	7 cut(s)	55, 192, 366, 502, 684, 723, 786
BssSI	CACGAG	1 cut(s)	528
BssT1I	CCWWGG	2 cut(s)	612, 1138
Bst2BI	CACGAG	1 cut(s)	528
Bst2UI	CCWGG	2 cut(s)	888, 1131
Bst4CI	ACNGT	2 cut(s)	276, 344
Bst6I	CTCTTC	3 cut(s)	8, 407, 810
BstC8I	GCNNGC	3 cut(s)	329, 631, 847
BstDEI	CTNAG	3 cut(s)	1055, 1114, 1153
BstDSI	CCRYGG	2 cut(s)	612, 1138
BstFNI	CGCG	3 cut(s)	633, 948, 963
BstKTI	GATC	7 cut(s)	58, 195, 369, 505, 687, 726, 789
BstMAI	GTCTC	2 cut(s)	470, 1128
BstMBI	GATC	7 cut(s)	55, 192, 366, 502, 684, 723, 786
BstMCI	CGRYCG	1 cut(s)	343
BstMWI	GCNNNNNNNGC	1 cut(s)	1088
BstNI	CCWGG	2 cut(s)	888, 1131
BstNSI	RCATGY	1 cut(s)	849
BstSCI	CCNGG	2 cut(s)	886, 1129
BstSFI	CTRYAG	2 cut(s)	272, 1089
BstSLI	GKGCMC	1 cut(s)	312
BstUI	CGCG	3 cut(s)	633, 948, 963
BstV1I	GCAGC	5 cut(s)	781, 1061, 1069, 1072, 1075
Bsu15I	ATCGAT	1 cut(s)	789
BsuRI	GGCC	3 cut(s)	265, 331, 484
BsuTUI	ATCGAT	1 cut(s)	789
BtgI	CCRYGG	2 cut(s)	612, 1138
BtsI	GCAGTG	2 cut(s)	516, 750
BtsIMutI	CAGTG	5 cut(s)	135, 237, 516, 750, 849
BtuMI	TCGCGA	1 cut(s)	963
BveI	ACCTGC	1 cut(s)	1082
Cac8I	GCNNGC	3 cut(s)	329, 631, 847
CciI	TCATGA	1 cut(s)	388
Cfr13I	GGNCC	3 cut(s)	264, 330, 1110
ClaI	ATCGAT	1 cut(s)	789
CseI	GACGC	1 cut(s)	622
Csp6I	GTAC	4 cut(s)	188, 229, 533, 677
CviAII	CATG	6 cut(s)	92, 389, 613, 846, 901, 1139
CviQI	GTAC	4 cut(s)	188, 229, 533, 677
DdeI	CTNAG	3 cut(s)	1055, 1114, 1153
DpnI	GATC	7 cut(s)	57, 194, 368, 504, 686, 725, 788
DpnII	GATC	7 cut(s)	55, 192, 366, 502, 684, 723, 786
DraI	TTTAAA	1 cut(s)	220
Eam1104I	CTCTTC	3 cut(s)	8, 407, 810
EarI	CTCTTC	3 cut(s)	8, 407, 810
Eco130I	CCWWGG	2 cut(s)	612, 1138
Eco31I	GGTCTC	1 cut(s)	1128
Eco47I	GGWCC	1 cut(s)	1110
Eco57I	CTGAAG	2 cut(s)	507, 777
EcoO109I	RGGNCCY	1 cut(s)	1110
EcoRI	GAATTC	1 cut(s)	1175
EcoRII	CCWGG	2 cut(s)	886, 1129
EcoT14I	CCWWGG	2 cut(s)	612, 1138
ErhI	CCWWGG	2 cut(s)	612, 1138
FaeI	CATG	6 cut(s)	95, 392, 616, 849, 904, 1142
FalI	AAGNNNNNCTT	6 cut(s)	345, 377, 903, 935, 1038, 1070
FatI	CATG	6 cut(s)	91, 388, 612, 845, 900, 1138
FbaI	TGATCA	1 cut(s)	192
FblI	GTMKAC	1 cut(s)	339
Fnu4HI	GCNGC	6 cut(s)	795, 954, 1050, 1083, 1086, 1089
Fsp4HI	GCNGC	6 cut(s)	795, 954, 1050, 1083, 1086, 1089
FspBI	CTAG	4 cut(s)	66, 293, 458, 1107
GluI	GCNGC	6 cut(s)	795, 954, 1050, 1083, 1086, 1089
GsuI	CTGGAG	2 cut(s)	873, 1152
HaeIII	GGCC	3 cut(s)	265, 331, 484
HgaI	GACGC	1 cut(s)	622
Hin1II	CATG	6 cut(s)	95, 392, 616, 849, 904, 1142
HincII	GTYRAC	2 cut(s)	340, 859
HindII	GTYRAC	2 cut(s)	340, 859
HinfI	GANTC	4 cut(s)	107, 140, 608, 855
HphI	GGTGA	5 cut(s)	574, 668, 722, 1106, 1178
Hpy166II	GTNNAC	6 cut(s)	71, 254, 340, 533, 859, 1184
Hpy188I	TCNGA	5 cut(s)	378, 607, 707, 832, 925
Hpy188III	TCNNGA	6 cut(s)	196, 389, 438, 737, 775, 962
Hpy8I	GTNNAC	6 cut(s)	71, 254, 340, 533, 859, 1184
Hpy99I	CGWCG	1 cut(s)	374
HpyAV	CCTTC	5 cut(s)	482, 737, 743, 835, 1010
HpyCH4III	ACNGT	2 cut(s)	276, 344
HpyCH4IV	ACGT	3 cut(s)	372, 975, 1034
HpyCH4V	TGCA	7 cut(s)	91, 113, 175, 509, 849, 866, 1091
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1088
HpyF3I	CTNAG	3 cut(s)	1055, 1114, 1153
HpySE526I	ACGT	3 cut(s)	372, 975, 1034
Hsp92II	CATG	6 cut(s)	95, 392, 616, 849, 904, 1142
Ksp22I	TGATCA	1 cut(s)	192
Kzo9I	GATC	7 cut(s)	55, 192, 366, 502, 684, 723, 786
LmnI	GCTCC	2 cut(s)	707, 950
Lsp1109I	GCAGC	5 cut(s)	781, 1061, 1069, 1072, 1075
LweI	GCATC	7 cut(s)	40, 122, 584, 690, 781, 922, 1195
MaeI	CTAG	4 cut(s)	66, 293, 458, 1107
MaeII	ACGT	3 cut(s)	372, 975, 1034
MaeIII	GTNAC	2 cut(s)	562, 640
MalI	GATC	7 cut(s)	57, 194, 368, 504, 686, 725, 788
MboI	GATC	7 cut(s)	55, 192, 366, 502, 684, 723, 786
MboII	GAAGA	7 cut(s)	25, 421, 424, 532, 559, 591, 797
MhlI	GDGCHC	1 cut(s)	312
MluCI	AATT	9 cut(s)	126, 215, 431, 467, 498, 582, 1169, 1175, 1187
MlyI	GAGTC	1 cut(s)	864
MseI	TTAA	3 cut(s)	219, 315, 1199
MslI	CAYNNNNRTG	1 cut(s)	287
MspA1I	CMGCKG	1 cut(s)	119
MspR9I	CCNGG	2 cut(s)	888, 1131
Mva1269I	GAATGC	1 cut(s)	294
MvaI	CCWGG	2 cut(s)	888, 1131
MvnI	CGCG	3 cut(s)	633, 948, 963
MwoI	GCNNNNNNNGC	1 cut(s)	1088
NcoI	CCATGG	2 cut(s)	612, 1138
NdeII	GATC	7 cut(s)	55, 192, 366, 502, 684, 723, 786
NlaIII	CATG	6 cut(s)	95, 392, 616, 849, 904, 1142
NlaIV	GGNNCC	3 cut(s)	309, 952, 1128
NmuCI	GTSAC	1 cut(s)	562
NruI	TCGCGA	1 cut(s)	963
NspI	RCATGY	1 cut(s)	849
PaeI	GCATGC	1 cut(s)	849
PagI	TCATGA	1 cut(s)	388
PaqCI	CACCTGC	1 cut(s)	1082
PasI	CCCWGGG	1 cut(s)	887
PctI	GAATGC	1 cut(s)	294
PfeI	GAWTC	3 cut(s)	107, 140, 608
PkrI	GCNGC	6 cut(s)	796, 955, 1051, 1084, 1087, 1090
PleI	GAGTC	1 cut(s)	863
PpsI	GAGTC	1 cut(s)	863
PpuMI	RGGWCCY	1 cut(s)	1110
PsiI	TTATAA	2 cut(s)	1004, 1068
Psp5II	RGGWCCY	1 cut(s)	1110
Psp6I	CCWGG	2 cut(s)	886, 1129
PspGI	CCWGG	2 cut(s)	886, 1129
PspN4I	GGNNCC	3 cut(s)	309, 952, 1128
PspPI	GGNCC	3 cut(s)	264, 330, 1110
PspPPI	RGGWCCY	1 cut(s)	1110
PstI	CTGCAG	1 cut(s)	1093
PvuII	CAGCTG	1 cut(s)	119
RruI	TCGCGA	1 cut(s)	963
RsaI	GTAC	4 cut(s)	189, 230, 534, 678
RsaNI	GTAC	4 cut(s)	188, 229, 533, 677
RseI	CAYNNNNRTG	1 cut(s)	287
SalI	GTCGAC	1 cut(s)	338
SaqAI	TTAA	3 cut(s)	219, 315, 1199
SatI	GCNGC	6 cut(s)	795, 954, 1050, 1083, 1086, 1089
Sau3AI	GATC	7 cut(s)	55, 192, 366, 502, 684, 723, 786
Sau96I	GGNCC	3 cut(s)	264, 330, 1110
SchI	GAGTC	1 cut(s)	864
ScrFI	CCNGG	2 cut(s)	888, 1131
SduI	GDGCHC	1 cut(s)	312
SfaNI	GCATC	7 cut(s)	40, 122, 584, 690, 781, 922, 1195
SfcI	CTRYAG	2 cut(s)	272, 1089
SinI	GGWCC	1 cut(s)	1110
SmiMI	CAYNNNNRTG	1 cut(s)	287
SpeI	ACTAGT	1 cut(s)	65
SphI	GCATGC	1 cut(s)	849
Sse9I	AATT	9 cut(s)	126, 215, 431, 467, 498, 582, 1169, 1175, 1187
SsiI	CCGC	3 cut(s)	298, 948, 954
SspI	AATATT	1 cut(s)	1197
SspMI	CTAG	4 cut(s)	66, 293, 458, 1107
StyD4I	CCNGG	2 cut(s)	886, 1129
StyI	CCWWGG	2 cut(s)	612, 1138
TaaI	ACNGT	2 cut(s)	276, 344
TaiI	ACGT	3 cut(s)	375, 978, 1037
TaqI	TCGA	4 cut(s)	58, 339, 369, 789
TasI	AATT	9 cut(s)	126, 215, 431, 467, 498, 582, 1169, 1175, 1187
TauI	GCSGC	1 cut(s)	956
TfiI	GAWTC	3 cut(s)	107, 140, 608
Tru1I	TTAA	3 cut(s)	219, 315, 1199
Tru9I	TTAA	3 cut(s)	219, 315, 1199
TscAI	CASTG	5 cut(s)	142, 244, 516, 757, 856
TseFI	GTSAC	1 cut(s)	562
TseI	GCWGC	5 cut(s)	794, 1049, 1082, 1085, 1088
Tsp45I	GTSAC	1 cut(s)	562
TspDTI	ATGAA	4 cut(s)	374, 405, 591, 756
TspGWI	ACGGA	1 cut(s)	1169
TspRI	CASTG	5 cut(s)	142, 244, 516, 757, 856
VpaK11BI	GGWCC	1 cut(s)	1110
XapI	RAATTY	2 cut(s)	215, 1175
XceI	RCATGY	1 cut(s)	849
XmiI	GTMKAC	1 cut(s)	339
XspI	CTAG	4 cut(s)	66, 293, 458, 1107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.