Enzymatic polyprotein-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 242 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 623 |
| AciI | CCGC | 4 cut(s) | 743, 1409, 1415, 1449 |
| AclWI | GGATC | 8 cut(s) | 52, 65, 804, 823, 836, 1334, 1391, 1485 |
| AcoI | YGGCCR | 6 cut(s) | 928, 1330, 1361, 1472, 1483, 1527 |
| AcsI | RAATTY | 3 cut(s) | 438, 474, 545 |
| AcuI | CTGAAG | 4 cut(s) | 71, 420, 821, 1017 |
| AcyI | GRCGYC | 1 cut(s) | 1431 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 623, 918, 1135, 1411, 1481, 1492, 1536 |
| AgsI | TTSAA | 9 cut(s) | 353, 686, 854, 890, 905, 1151, 1214, 1228, 1235 |
| AjnI | CCWGG | 3 cut(s) | 132, 327, 1017 |
| AluBI | AGCT | 5 cut(s) | 102, 308, 383, 398, 673 |
| AluI | AGCT | 5 cut(s) | 102, 308, 383, 398, 673 |
| Alw26I | GTCTC | 2 cut(s) | 162, 613 |
| AlwI | GGATC | 8 cut(s) | 52, 65, 804, 823, 836, 1334, 1391, 1485 |
| AoxI | GGCC | 9 cut(s) | 114, 422, 928, 1330, 1361, 1472, 1483, 1527, 1562 |
| ApeKI | GCWGC | 1 cut(s) | 1022 |
| ApoI | RAATTY | 3 cut(s) | 438, 474, 545 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 438, 474 |
| AspS9I | GGNCC | 3 cut(s) | 614, 711, 1562 |
| AsuC2I | CCSGG | 3 cut(s) | 1365, 1466, 1522 |
| AsuHPI | GGTGA | 1 cut(s) | 1396 |
| AsuII | TTCGAA | 1 cut(s) | 432 |
| AsuNHI | GCTAGC | 2 cut(s) | 149, 304 |
| AvaII | GGWCC | 2 cut(s) | 614, 711 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 267, 300, 1173, 1206 |
| BalI | TGGCCA | 1 cut(s) | 930 |
| BamHI | GGATCC | 2 cut(s) | 57, 828 |
| BbsI | GAAGAC | 1 cut(s) | 585 |
| BbvI | GCAGC | 1 cut(s) | 1034 |
| BccI | CCATC | 3 cut(s) | 190, 1128, 1464 |
| BceAI | ACGGC | 3 cut(s) | 859, 1207, 1472 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1181, 1215 |
| BciT130I | CCWGG | 3 cut(s) | 134, 329, 1019 |
| BclI | TGATCA | 2 cut(s) | 124, 1291 |
| BcnI | CCSGG | 3 cut(s) | 1365, 1466, 1522 |
| BcoDI | GTCTC | 2 cut(s) | 162, 613 |
| BfaI | CTAG | 5 cut(s) | 150, 305, 908, 971, 1406 |
| BisI | GCNGC | 4 cut(s) | 743, 1023, 1416, 1450 |
| BlpI | GCTNAGC | 1 cut(s) | 98 |
| BlsI | GCNGC | 4 cut(s) | 744, 1024, 1417, 1451 |
| Bme1390I | CCNGG | 6 cut(s) | 134, 329, 1019, 1365, 1466, 1522 |
| Bme18I | GGWCC | 2 cut(s) | 614, 711 |
| BmgT120I | GGNCC | 3 cut(s) | 614, 711, 1562 |
| BmiI | GGNNCC | 5 cut(s) | 59, 510, 830, 1519, 1563 |
| BmrFI | CCNGG | 6 cut(s) | 134, 329, 1019, 1365, 1466, 1522 |
| BmrI | ACTGGG | 2 cut(s) | 41, 1454 |
| BmsI | GCATC | 1 cut(s) | 1330 |
| BmtI | GCTAGC | 2 cut(s) | 153, 308 |
| BmuI | ACTGGG | 2 cut(s) | 41, 1454 |
| BpiI | GAAGAC | 1 cut(s) | 585 |
| Bpu10I | CCTNAGC | 2 cut(s) | 394, 504 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 98 |
| Bpu14I | TTCGAA | 1 cut(s) | 432 |
| BpuEI | CTTGAG | 2 cut(s) | 645, 925 |
| BpuMI | CCSGG | 3 cut(s) | 1365, 1466, 1522 |
| BsaHI | GRCGYC | 1 cut(s) | 1431 |
| BsaJI | CCNNGG | 5 cut(s) | 132, 950, 1333, 1434, 1465 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1446, 1476, 1487, 1517 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 623, 918, 1135, 1411, 1481, 1492, 1536 |
| Bse1I | ACTGG | 6 cut(s) | 36, 238, 298, 542, 1125, 1449 |
| BseBI | CCWGG | 3 cut(s) | 134, 329, 1019 |
| BseDI | CCNNGG | 5 cut(s) | 132, 950, 1333, 1434, 1465 |
| BseGI | GGATG | 4 cut(s) | 655, 960, 1345, 1475 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 623, 918, 1135, 1411, 1481, 1492, 1536 |
| BseMII | CTCAG | 1 cut(s) | 624 |
| BseNI | ACTGG | 6 cut(s) | 36, 238, 298, 542, 1125, 1449 |
| BseRI | GAGGAG | 4 cut(s) | 807, 1319, 1504, 1552 |
| BseX3I | CGGCCG | 2 cut(s) | 1330, 1527 |
| BseXI | GCAGC | 1 cut(s) | 1034 |
| BseYI | CCCAGC | 1 cut(s) | 379 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1333, 1530 |
| BshFI | GGCC | 9 cut(s) | 116, 424, 930, 1332, 1363, 1474, 1485, 1529, 1564 |
| BsiEI | CGRYCG | 2 cut(s) | 1333, 1530 |
| BsiSI | CCGG | 7 cut(s) | 1344, 1364, 1465, 1475, 1486, 1521, 1530 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 623, 918, 1135, 1411, 1481, 1492, 1536 |
| BsmAI | GTCTC | 2 cut(s) | 162, 613 |
| BsmBI | CGTCTC | 2 cut(s) | 162, 613 |
| BsmI | GAATGC | 1 cut(s) | 945 |
| BsnI | GGCC | 9 cut(s) | 116, 424, 930, 1332, 1363, 1474, 1485, 1529, 1564 |
| Bsp119I | TTCGAA | 1 cut(s) | 432 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 98 |
| Bsp19I | CCATGG | 1 cut(s) | 1434 |
| BspACI | CCGC | 4 cut(s) | 743, 1409, 1415, 1449 |
| BspANI | GGCC | 9 cut(s) | 116, 424, 930, 1332, 1363, 1474, 1485, 1529, 1564 |
| BspCNI | CTCAG | 1 cut(s) | 623 |
| BspLI | GGNNCC | 5 cut(s) | 59, 510, 830, 1519, 1563 |
| BspOI | GCTAGC | 2 cut(s) | 153, 308 |
| BspPI | GGATC | 8 cut(s) | 52, 65, 804, 823, 836, 1334, 1391, 1485 |
| BspT104I | TTCGAA | 1 cut(s) | 432 |
| BsrI | ACTGG | 6 cut(s) | 36, 238, 298, 542, 1125, 1449 |
| BssECI | CCNNGG | 5 cut(s) | 132, 950, 1333, 1434, 1465 |
| BssNI | GRCGYC | 1 cut(s) | 1431 |
| BssT1I | CCWWGG | 2 cut(s) | 950, 1434 |
| Bst2UI | CCWGG | 3 cut(s) | 134, 329, 1019 |
| Bst4CI | ACNGT | 4 cut(s) | 173, 192, 429, 763 |
| Bst6I | CTCTTC | 2 cut(s) | 47, 1296 |
| BstACI | GRCGYC | 1 cut(s) | 1431 |
| BstBI | TTCGAA | 1 cut(s) | 432 |
| BstC8I | GCNNGC | 3 cut(s) | 151, 306, 1126 |
| BstDEI | CTNAG | 5 cut(s) | 98, 394, 504, 610, 634 |
| BstDSI | CCRYGG | 1 cut(s) | 1434 |
| BstF5I | GGATG | 4 cut(s) | 655, 960, 1345, 1475 |
| BstMAI | GTCTC | 2 cut(s) | 162, 613 |
| BstMCI | CGRYCG | 2 cut(s) | 1333, 1530 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 108, 389, 1415 |
| BstNI | CCWGG | 3 cut(s) | 134, 329, 1019 |
| BstNSI | RCATGY | 1 cut(s) | 1128 |
| BstSCI | CCNGG | 6 cut(s) | 132, 327, 1017, 1363, 1464, 1520 |
| BstV1I | GCAGC | 1 cut(s) | 1034 |
| BstV2I | GAAGAC | 1 cut(s) | 585 |
| BstX2I | RGATCY | 3 cut(s) | 57, 809, 828 |
| BstYI | RGATCY | 3 cut(s) | 57, 809, 828 |
| BstZI | CGGCCG | 2 cut(s) | 1330, 1527 |
| BsuRI | GGCC | 9 cut(s) | 116, 424, 930, 1332, 1363, 1474, 1485, 1529, 1564 |
| BtgI | CCRYGG | 1 cut(s) | 1434 |
| BtsCI | GGATG | 4 cut(s) | 655, 960, 1345, 1475 |
| BtsI | GCAGTG | 3 cut(s) | 370, 1044, 1081 |
| BtsIMutI | CAGTG | 4 cut(s) | 370, 1044, 1081, 1118 |
| Cac8I | GCNNGC | 3 cut(s) | 151, 306, 1126 |
| Cfr13I | GGNCC | 3 cut(s) | 614, 711, 1562 |
| CseI | GACGC | 1 cut(s) | 1439 |
| CviAII | CATG | 5 cut(s) | 517, 542, 964, 1125, 1435 |
| DdeI | CTNAG | 5 cut(s) | 98, 394, 504, 610, 634 |
| EaeI | YGGCCR | 6 cut(s) | 928, 1330, 1361, 1472, 1483, 1527 |
| EagI | CGGCCG | 2 cut(s) | 1330, 1527 |
| Eam1104I | CTCTTC | 2 cut(s) | 47, 1296 |
| EarI | CTCTTC | 2 cut(s) | 47, 1296 |
| EclXI | CGGCCG | 2 cut(s) | 1330, 1527 |
| Eco130I | CCWWGG | 2 cut(s) | 950, 1434 |
| Eco32I | GATATC | 1 cut(s) | 1003 |
| Eco47I | GGWCC | 2 cut(s) | 614, 711 |
| Eco52I | CGGCCG | 2 cut(s) | 1330, 1527 |
| Eco57I | CTGAAG | 4 cut(s) | 71, 420, 821, 1017 |
| EcoRI | GAATTC | 1 cut(s) | 545 |
| EcoRII | CCWGG | 3 cut(s) | 132, 327, 1017 |
| EcoRV | GATATC | 1 cut(s) | 1003 |
| EcoT14I | CCWWGG | 2 cut(s) | 950, 1434 |
| ErhI | CCWWGG | 2 cut(s) | 950, 1434 |
| Esp3I | CGTCTC | 2 cut(s) | 162, 613 |
| FaeI | CATG | 5 cut(s) | 520, 545, 967, 1128, 1438 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 934, 966, 1262, 1294 |
| FatI | CATG | 5 cut(s) | 516, 541, 963, 1124, 1434 |
| FauI | CCCGC | 1 cut(s) | 1402 |
| FauNDI | CATATG | 1 cut(s) | 619 |
| FbaI | TGATCA | 2 cut(s) | 124, 1291 |
| Fnu4HI | GCNGC | 4 cut(s) | 743, 1023, 1416, 1450 |
| FokI | GGATG | 4 cut(s) | 642, 967, 1352, 1482 |
| Fsp4HI | GCNGC | 4 cut(s) | 743, 1023, 1416, 1450 |
| FspBI | CTAG | 5 cut(s) | 150, 305, 908, 971, 1406 |
| GluI | GCNGC | 4 cut(s) | 743, 1023, 1416, 1450 |
| GsaI | CCCAGC | 1 cut(s) | 383 |
| HaeIII | GGCC | 9 cut(s) | 116, 424, 930, 1332, 1363, 1474, 1485, 1529, 1564 |
| HapII | CCGG | 7 cut(s) | 1344, 1364, 1465, 1475, 1486, 1521, 1530 |
| HgaI | GACGC | 1 cut(s) | 1439 |
| Hin1I | GRCGYC | 1 cut(s) | 1431 |
| Hin1II | CATG | 5 cut(s) | 520, 545, 967, 1128, 1438 |
| HincII | GTYRAC | 1 cut(s) | 757 |
| HindII | GTYRAC | 1 cut(s) | 757 |
| HinfI | GANTC | 7 cut(s) | 79, 530, 882, 967, 1112, 1214, 1461 |
| HpaII | CCGG | 7 cut(s) | 1344, 1364, 1465, 1475, 1486, 1521, 1530 |
| HphI | GGTGA | 1 cut(s) | 1396 |
| Hpy166II | GTNNAC | 3 cut(s) | 653, 711, 757 |
| Hpy188III | TCNNGA | 9 cut(s) | 353, 494, 612, 662, 971, 982, 1061, 1240, 1312 |
| Hpy8I | GTNNAC | 3 cut(s) | 653, 711, 757 |
| HpyAV | CCTTC | 4 cut(s) | 313, 414, 558, 1317 |
| HpyCH4III | ACNGT | 4 cut(s) | 173, 192, 429, 763 |
| HpyCH4V | TGCA | 2 cut(s) | 1202, 1572 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 108, 389, 1415 |
| HpyF3I | CTNAG | 5 cut(s) | 98, 394, 504, 610, 634 |
| Hsp92I | GRCGYC | 1 cut(s) | 1431 |
| Hsp92II | CATG | 5 cut(s) | 520, 545, 967, 1128, 1438 |
| Ksp22I | TGATCA | 2 cut(s) | 124, 1291 |
| LmnI | GCTCC | 1 cut(s) | 1438 |
| Lsp1109I | GCAGC | 1 cut(s) | 1034 |
| LweI | GCATC | 1 cut(s) | 1330 |
| MaeI | CTAG | 5 cut(s) | 150, 305, 908, 971, 1406 |
| MaeIII | GTNAC | 1 cut(s) | 1076 |
| MflI | RGATCY | 3 cut(s) | 57, 809, 828 |
| MlsI | TGGCCA | 1 cut(s) | 930 |
| MluCI | AATT | 8 cut(s) | 253, 260, 438, 474, 545, 571, 1035, 1377 |
| MluNI | TGGCCA | 1 cut(s) | 930 |
| MlyI | GAGTC | 2 cut(s) | 961, 1455 |
| MmeI | TCCRAC | 4 cut(s) | 254, 604, 617, 1495 |
| Mox20I | TGGCCA | 1 cut(s) | 930 |
| MroXI | GAANNNNTTC | 2 cut(s) | 438, 474 |
| MscI | TGGCCA | 1 cut(s) | 930 |
| MseI | TTAA | 6 cut(s) | 84, 138, 252, 263, 639, 1376 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1123, 1316 |
| Msp20I | TGGCCA | 1 cut(s) | 930 |
| MspI | CCGG | 7 cut(s) | 1344, 1364, 1465, 1475, 1486, 1521, 1530 |
| MspR9I | CCNGG | 6 cut(s) | 134, 329, 1019, 1365, 1466, 1522 |
| Mva1269I | GAATGC | 1 cut(s) | 945 |
| MvaI | CCWGG | 3 cut(s) | 134, 329, 1019 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 108, 389, 1415 |
| NciI | CCSGG | 3 cut(s) | 1365, 1466, 1522 |
| NcoI | CCATGG | 1 cut(s) | 1434 |
| NdeI | CATATG | 1 cut(s) | 619 |
| NheI | GCTAGC | 2 cut(s) | 149, 304 |
| NlaIII | CATG | 5 cut(s) | 520, 545, 967, 1128, 1438 |
| NlaIV | GGNNCC | 5 cut(s) | 59, 510, 830, 1519, 1563 |
| NmeAIII | GCCGAG | 1 cut(s) | 1358 |
| NmuCI | GTSAC | 1 cut(s) | 1076 |
| NspI | RCATGY | 1 cut(s) | 1128 |
| NspV | TTCGAA | 1 cut(s) | 432 |
| PaeI | GCATGC | 1 cut(s) | 1128 |
| PctI | GAATGC | 1 cut(s) | 945 |
| PdmI | GAANNNNTTC | 2 cut(s) | 438, 474 |
| PfeI | GAWTC | 5 cut(s) | 79, 530, 882, 1112, 1214 |
| PflFI | GACNNNGTC | 1 cut(s) | 1067 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 623 |
| PfoI | TCCNGGA | 1 cut(s) | 327 |
| PkrI | GCNGC | 4 cut(s) | 744, 1024, 1417, 1451 |
| PleI | GAGTC | 2 cut(s) | 961, 1455 |
| PpsI | GAGTC | 2 cut(s) | 961, 1455 |
| PsiI | TTATAA | 1 cut(s) | 242 |
| Psp6I | CCWGG | 3 cut(s) | 132, 327, 1017 |
| PspFI | CCCAGC | 1 cut(s) | 379 |
| PspGI | CCWGG | 3 cut(s) | 132, 327, 1017 |
| PspN4I | GGNNCC | 5 cut(s) | 59, 510, 830, 1519, 1563 |
| PspPI | GGNCC | 3 cut(s) | 614, 711, 1562 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 259, 291 |
| PsuI | RGATCY | 3 cut(s) | 57, 809, 828 |
| PsyI | GACNNNGTC | 1 cut(s) | 1067 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1123, 1316 |
| SaqAI | TTAA | 6 cut(s) | 84, 138, 252, 263, 639, 1376 |
| SatI | GCNGC | 4 cut(s) | 743, 1023, 1416, 1450 |
| Sau96I | GGNCC | 3 cut(s) | 614, 711, 1562 |
| SchI | GAGTC | 2 cut(s) | 961, 1455 |
| ScrFI | CCNGG | 6 cut(s) | 134, 329, 1019, 1365, 1466, 1522 |
| SfaNI | GCATC | 1 cut(s) | 1330 |
| SfuI | TTCGAA | 1 cut(s) | 432 |
| SinI | GGWCC | 2 cut(s) | 614, 711 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1123, 1316 |
| SmlI | CTYRAG | 2 cut(s) | 660, 940 |
| SmoI | CTYRAG | 2 cut(s) | 660, 940 |
| SphI | GCATGC | 1 cut(s) | 1128 |
| Sse9I | AATT | 8 cut(s) | 253, 260, 438, 474, 545, 571, 1035, 1377 |
| SsiI | CCGC | 4 cut(s) | 743, 1409, 1415, 1449 |
| SspI | AATATT | 1 cut(s) | 772 |
| SspMI | CTAG | 5 cut(s) | 150, 305, 908, 971, 1406 |
| StyD4I | CCNGG | 6 cut(s) | 132, 327, 1017, 1363, 1464, 1520 |
| StyI | CCWWGG | 2 cut(s) | 950, 1434 |
| TaaI | ACNGT | 4 cut(s) | 173, 192, 429, 763 |
| TaqI | TCGA | 7 cut(s) | 104, 432, 486, 796, 1115, 1191, 1395 |
| TasI | AATT | 8 cut(s) | 253, 260, 438, 474, 545, 571, 1035, 1377 |
| TauI | GCSGC | 3 cut(s) | 745, 1418, 1452 |
| TfiI | GAWTC | 5 cut(s) | 79, 530, 882, 1112, 1214 |
| Tru1I | TTAA | 6 cut(s) | 84, 138, 252, 263, 639, 1376 |
| Tru9I | TTAA | 6 cut(s) | 84, 138, 252, 263, 639, 1376 |
| TscAI | CASTG | 4 cut(s) | 370, 1051, 1081, 1125 |
| TseFI | GTSAC | 1 cut(s) | 1076 |
| TseI | GCWGC | 1 cut(s) | 1022 |
| Tsp45I | GTSAC | 1 cut(s) | 1076 |
| TspDTI | ATGAA | 6 cut(s) | 17, 273, 431, 543, 558, 971 |
| TspGWI | ACGGA | 2 cut(s) | 855, 1563 |
| TspRI | CASTG | 4 cut(s) | 370, 1051, 1081, 1125 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1067 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 623 |
| VpaK11BI | GGWCC | 2 cut(s) | 614, 711 |
| XapI | RAATTY | 3 cut(s) | 438, 474, 545 |
| XbaI | TCTAGA | 1 cut(s) | 970 |
| XceI | RCATGY | 1 cut(s) | 1128 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1441 |
| XmnI | GAANNNNTTC | 2 cut(s) | 438, 474 |
| XspI | CTAG | 5 cut(s) | 150, 305, 908, 971, 1406 |