Rmu_sc0006366.1_g000015

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006366.1
OG0000419
Physical Location & Seq
Forward (+)
51072 .. 57536
6465 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006366.1_g000015.1.cds

Sequence Viewer

Length: 1518 bp
atggcgttgaggaagggtgctgccggagccgaggctgagatccatcatgcatctgagatccatttcgtgcgtccgagaactagtcgcgaaactgctagtctgtcgggattcagttccagtcgtcgacgtgatggtggaaaggagtgtttcgccggagagagagagaggcagaggagagaatcggagatctggttccaatccgcgtcgtgcatcagagatccactcaaaggagttctacaggacaacaggttaacagacttccaagctagtctgttgggaacgcttgaagcatccctatgcgaccaagtagcatatttcaactgcttccccaacttcatcaccagcttgaaagatgcagctcactgtctcagactaagagtcaagacagacggcatatccatgaaagaagatatgcaagaactcgcaatagtatacaggatatactataaattgatgagtaccacagtagcccctaagacgaggattacaaatatcccaggtcttactactggattcctcaccaatcagaagaaccattcacagcagatccataaagttacctggaatgaagtaacatttcctcctgaatggaaattatccggtccaaaaaagcaaccggaaagagcaagagcaaaaatctacgagagtagaagaactggagaaatcagcctcaacttcgacaatcataggaagagtgatgtctgtcctgagaacaacctcaggataaatagtagtcttctgagaagaagctacagcactagagaagctagtgtcagtggaaacaagaattatcttccaaacgcattgaccagagaactggcaatgttcagccagagagaaaacgacgaaggtcgtaatcccagaaacagaagaactgggaaggaacatgaacctcaagaagatcctatggaaaccaaagaaaaggtccttaaaaggtttctgctaagtccaaaaggcttggccacaactgatcaatcccagggtaaaggattggctagcccgtctcacattagaaaaaatgactgtatgcttcgactgaagttcagatctactcctccagaatggatccagaaggcaaacggagaagttgaatatattcctccttatcactatgtaagaattattcaaaggaaatatcttcaaccagcctgtgtagggtacaatggccagccaaactcaagcatcccgtggatgaaggccatgactctagaatatatcaagaagatcatctctgaagatgtcaacaataccttcctggcagcaggagagaaaatcattatcactgcatacgatcatcctgacgtagtcagcagtgacttattcctatctcttaccagaaaggagatagattcgacactggcatgcttacgatgggtggaaaagcttgaaacagacaaccactacaaactgtatgttgatacagatgtcgaagataatgcaacaacagtaaggatggcccaggcagataacgactcgtttgtccttggtcacaattcagaaaccgacgagaacatgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

505

Amino Acids

57.75

Weight (kDa)

8.93

Isoelectric Point (pI)

50.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000419)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0378961 RchiOBHm_Chr3g0452751 RchiOBHm_Chr6g0244511 RchiOBHm_Chr6g0265751 RchiOBHm_Chr7g0243311
rosa_laevigata RLG00000002693 RLG00000003022 RLG00000006790 RLG00000008553
rosa_multiflora Rmu_sc0000063.1_g000020 Rmu_sc0000239.1_g000008 Rmu_sc0000365.1_g000035 Rmu_sc0000431.1_g000029 Rmu_sc0000528.1_g000019 Rmu_sc0000536.1_g000014 Rmu_sc0000663.1_g000004 Rmu_sc0000753.1_g000003 Rmu_sc0000754.1_g000014 Rmu_sc0000805.1_g000036 Rmu_sc0000974.1_g000024 Rmu_sc0000976.1_g000012 Rmu_sc0001097.1_g000047 Rmu_sc0001122.1_g000010 Rmu_sc0001207.1_g000032 Rmu_sc0001214.1_g000001 Rmu_sc0001323.1_g000017 Rmu_sc0001673.1_g000006 Rmu_sc0001785.1_g000018 Rmu_sc0001959.1_g000012 Rmu_sc0002073.1_g000006 Rmu_sc0002076.1_g000005 Rmu_sc0002094.1_g000004 Rmu_sc0002132.1_g000057 Rmu_sc0002170.1_g000036 Rmu_sc0002187.1_g000010 Rmu_sc0002316.1_g000037 Rmu_sc0002324.1_g000009 Rmu_sc0002367.1_g000001 Rmu_sc0002482.1_g000001 Rmu_sc0002547.1_g000017 Rmu_sc0002578.1_g000012 Rmu_sc0002693.1_g000016 Rmu_sc0002706.1_g000004 Rmu_sc0002759.1_g000032 Rmu_sc0002765.1_g000002 Rmu_sc0002845.1_g000026 Rmu_sc0002895.1_g000014 Rmu_sc0002983.1_g000013 Rmu_sc0003187.1_g000017 Rmu_sc0003249.1_g000029 Rmu_sc0003342.1_g000038 Rmu_sc0003374.1_g000002 Rmu_sc0003470.1_g000017 Rmu_sc0003669.1_g000013 Rmu_sc0003693.1_g000008 Rmu_sc0003749.1_g000015 Rmu_sc0003833.1_g000005 Rmu_sc0003936.1_g000036 Rmu_sc0004798.1_g000001 Rmu_sc0004932.1_g000024 Rmu_sc0005088.1_g000004 Rmu_sc0005439.1_g000003 Rmu_sc0005532.1_g000002 Rmu_sc0005728.1_g000009 Rmu_sc0005879.1_g000012 Rmu_sc0005914.1_g000010 Rmu_sc0006112.1_g000002 Rmu_sc0006196.1_g000003 Rmu_sc0006248.1_g000001 Rmu_sc0006366.1_g000015 Rmu_sc0006567.1_g000015 Rmu_sc0006695.1_g000070 Rmu_sc0006937.1_g000004 Rmu_sc0007647.1_g000009 Rmu_sc0008681.1_g000001 Rmu_sc0009833.1_g000019 Rmu_sc0010256.1_g000006 Rmu_sc0010366.1_g000001 Rmu_sc0010462.1_g000006 Rmu_sc0010817.1_g000017 Rmu_sc0014139.1_g000002 Rmu_sc0015191.1_g000001 Rmu_sc0015649.1_g000002 Rmu_sc0017650.1_g000005 Rmu_sc0028733.1_g000002 Rmu_ssc0000024.1_g000019 Rmu_ssc0000134.1_g000059 Rmu_ssc0000400.1_g000040 Rmu_ssc0000438.1_g000049
rosa_roxburghii Rroxscaffold_3G00231160 Rroxscaffold_5G00354700 Rroxscaffold_6G00395540
rosa_rugosa Rorug01G0149700.1 Rorug03G0299500 Rorug07G0249000
rosa_samantha Rh3BG164500 Rh3BG164800 Rh6BG099500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1478
AccI GTMKAC 2 cut(s) 124, 432
AccII CGCG 2 cut(s) 87, 203
AciI CCGC 1 cut(s) 201
AclWI GGATC 7 cut(s) 34, 52, 212, 541, 896, 1060, 1073
AcoI YGGCCR 2 cut(s) 960, 1165
AcuI CTGAAG 2 cut(s) 1058, 1254
AfaI GTAC 2 cut(s) 460, 1160
AfiI CCNNNNNNNGG 2 cut(s) 227, 1155
AflIII ACRYGT 1 cut(s) 1512
AgsI TTSAA 7 cut(s) 287, 319, 349, 1091, 1127, 1142, 1388
AhdI GACNNNNNGTC 1 cut(s) 377
AhlI ACTAGT 1 cut(s) 80
AjiI CACGTC 1 cut(s) 128
AjnI CCWGG 5 cut(s) 496, 560, 978, 1254, 1458
AloI GAACNNNNNNTCC 2 cut(s) 176, 208
AluBI AGCT 6 cut(s) 266, 345, 359, 750, 767, 1384
AluI AGCT 6 cut(s) 266, 345, 359, 750, 767, 1384
Alw26I GTCTC 2 cut(s) 371, 1008
AlwI GGATC 7 cut(s) 34, 52, 212, 541, 896, 1060, 1073
AoxI GGCC 4 cut(s) 960, 1165, 1197, 1455
ApeKI GCWGC 3 cut(s) 20, 356, 1259
ArsI GACNNNNNNTTYG 2 cut(s) 909, 941
Asp700I GAANNNNTTC 1 cut(s) 1095
AspS9I GGNCC 3 cut(s) 602, 925, 1456
AsuHPI GGTGA 2 cut(s) 331, 511
AsuNHI GCTAGC 1 cut(s) 995
AvaII GGWCC 2 cut(s) 602, 925
AxyI CCTNAGG 1 cut(s) 719
BaeI ACNNNNGTAYC 2 cut(s) 1410, 1443
BalI TGGCCA 2 cut(s) 962, 1167
BamHI GGATCC 1 cut(s) 1065
BbsI GAAGAC 1 cut(s) 728
BbvI GCAGC 3 cut(s) 7, 368, 1271
BccI CCATC 4 cut(s) 51, 125, 1365, 1447
BceAI ACGGC 1 cut(s) 406
BcgI CGANNNNNNTGC 2 cut(s) 1418, 1452
BciT130I CCWGG 5 cut(s) 498, 562, 980, 1256, 1460
BclI TGATCA 1 cut(s) 970
BcoDI GTCTC 2 cut(s) 371, 1008
BcuI ACTAGT 1 cut(s) 80
BfaI CTAG 7 cut(s) 81, 96, 267, 759, 768, 996, 1208
BfmI CTRYAG 2 cut(s) 236, 751
BglII AGATCT 2 cut(s) 186, 1046
BisI GCNGC 3 cut(s) 21, 357, 1260
BlsI GCNGC 3 cut(s) 22, 358, 1261
Bme1390I CCNGG 5 cut(s) 498, 562, 980, 1256, 1460
Bme18I GGWCC 2 cut(s) 602, 925
BmeRI GACNNNNNGTC 1 cut(s) 377
BmgBI CACGTC 1 cut(s) 128
BmgT120I GGNCC 3 cut(s) 602, 925, 1456
BmiI GGNNCC 3 cut(s) 28, 194, 1067
BmrFI CCNGG 5 cut(s) 498, 562, 980, 1256, 1460
BmrI ACTGGG 1 cut(s) 885
BmsI GCATC 5 cut(s) 59, 219, 299, 343, 1191
BmtI GCTAGC 1 cut(s) 999
BmuI ACTGGG 1 cut(s) 885
BoxI GACNNNNGTC 1 cut(s) 849
BpiI GAAGAC 1 cut(s) 728
BplI GAGNNNNNCTC 2 cut(s) 207, 239
BpmI CTGGAG 2 cut(s) 678, 1041
BpuEI CTTGAG 2 cut(s) 879, 1162
BsaJI CCNNGG 7 cut(s) 30, 496, 978, 979, 1187, 1458, 1483
BsaWI WCCGGW 2 cut(s) 599, 616
BsaXI ACNNNNNCTCC 4 cut(s) 176, 206, 565, 595
Bsc4I CCNNNNNNNGG 2 cut(s) 227, 1155
Bse1I ACTGG 6 cut(s) 117, 514, 661, 822, 880, 1362
Bse21I CCTNAGG 1 cut(s) 719
Bse3DI GCAATG 1 cut(s) 828
BseBI CCWGG 5 cut(s) 498, 562, 980, 1256, 1460
BseDI CCNNGG 7 cut(s) 30, 496, 978, 979, 1187, 1458, 1483
BseGI GGATG 5 cut(s) 290, 1182, 1197, 1294, 1458
BseLI CCNNNNNNNGG 2 cut(s) 227, 1155
BseMI GCAATG 1 cut(s) 828
BseMII CTCAG 6 cut(s) 27, 45, 382, 699, 731, 733
BseNI ACTGG 6 cut(s) 117, 514, 661, 822, 880, 1362
BseRI GAGGAG 2 cut(s) 187, 1044
BseXI GCAGC 3 cut(s) 7, 368, 1271
Bsh1236I CGCG 2 cut(s) 87, 203
BshFI GGCC 4 cut(s) 962, 1167, 1199, 1457
BsiSI CCGG 4 cut(s) 24, 153, 600, 617
BslI CCNNNNNNNGG 2 cut(s) 227, 1155
BsmAI GTCTC 2 cut(s) 371, 1008
BsmBI CGTCTC 1 cut(s) 1008
BsnI GGCC 4 cut(s) 962, 1167, 1199, 1457
Bsp68I TCGCGA 1 cut(s) 87
BspACI CCGC 1 cut(s) 201
BspANI GGCC 4 cut(s) 962, 1167, 1199, 1457
BspCNI CTCAG 6 cut(s) 28, 46, 381, 700, 732, 732
BspFNI CGCG 2 cut(s) 87, 203
BspLI GGNNCC 3 cut(s) 28, 194, 1067
BspOI GCTAGC 1 cut(s) 999
BspPI GGATC 7 cut(s) 34, 52, 212, 541, 896, 1060, 1073
BsrDI GCAATG 1 cut(s) 828
BsrI ACTGG 6 cut(s) 117, 514, 661, 822, 880, 1362
BssECI CCNNGG 7 cut(s) 30, 496, 978, 979, 1187, 1458, 1483
BssNAI GTATAC 1 cut(s) 433
BssT1I CCWWGG 1 cut(s) 1483
Bst1107I GTATAC 1 cut(s) 433
Bst2UI CCWGG 5 cut(s) 498, 562, 980, 1256, 1460
Bst4CI ACNGT 5 cut(s) 365, 466, 1025, 1410, 1447
Bst6I CTCTTC 1 cut(s) 686
BstC8I GCNNGC 3 cut(s) 997, 1169, 1363
BstDEI CTNAG 9 cut(s) 36, 54, 368, 374, 474, 708, 719, 740, 944
BstDSI CCRYGG 1 cut(s) 1187
BstF5I GGATG 5 cut(s) 290, 1182, 1197, 1294, 1458
BstFNI CGCG 2 cut(s) 87, 203
BstMAI GTCTC 2 cut(s) 371, 1008
BstMWI GCNNNNNNNGC 1 cut(s) 26
BstNI CCWGG 5 cut(s) 498, 562, 980, 1256, 1460
BstNSI RCATGY 2 cut(s) 1365, 1516
BstPAI GACNNNNGTC 1 cut(s) 849
BstSCI CCNGG 5 cut(s) 496, 560, 978, 1254, 1458
BstSFI CTRYAG 2 cut(s) 236, 751
BstUI CGCG 2 cut(s) 87, 203
BstV1I GCAGC 3 cut(s) 7, 368, 1271
BstV2I GAAGAC 1 cut(s) 728
BstX2I RGATCY 8 cut(s) 39, 57, 186, 217, 546, 901, 1046, 1065
BstXI CCANNNNNNTGG 1 cut(s) 817
BstYI RGATCY 8 cut(s) 39, 57, 186, 217, 546, 901, 1046, 1065
BstZ17I GTATAC 1 cut(s) 433
Bsu36I CCTNAGG 1 cut(s) 719
BsuRI GGCC 4 cut(s) 962, 1167, 1199, 1457
BtgI CCRYGG 1 cut(s) 1187
BtrI CACGTC 1 cut(s) 128
BtsCI GGATG 5 cut(s) 290, 1182, 1197, 1294, 1458
BtsI GCAGTG 2 cut(s) 1281, 1318
BtsIMutI CAGTG 5 cut(s) 361, 781, 1281, 1318, 1355
BtuMI TCGCGA 1 cut(s) 87
Cac8I GCNNGC 3 cut(s) 997, 1169, 1363
Cfr13I GGNCC 3 cut(s) 602, 925, 1456
CseI GACGC 2 cut(s) 59, 192
Csp6I GTAC 2 cut(s) 459, 1159
CviAII CATG 6 cut(s) 47, 400, 887, 1201, 1362, 1513
CviQI GTAC 2 cut(s) 459, 1159
DdeI CTNAG 9 cut(s) 36, 54, 368, 374, 474, 708, 719, 740, 944
DrdI GACNNNNNNGTC 1 cut(s) 1478
DriI GACNNNNNGTC 1 cut(s) 377
DseDI GACNNNNNNGTC 1 cut(s) 1478
EaeI YGGCCR 2 cut(s) 960, 1165
Eam1104I CTCTTC 1 cut(s) 686
Eam1105I GACNNNNNGTC 1 cut(s) 377
EarI CTCTTC 1 cut(s) 686
Eco130I CCWWGG 1 cut(s) 1483
Eco47I GGWCC 2 cut(s) 602, 925
Eco57I CTGAAG 2 cut(s) 1058, 1254
Eco81I CCTNAGG 1 cut(s) 719
EcoO109I RGGNCCY 1 cut(s) 925
EcoRII CCWGG 5 cut(s) 496, 560, 978, 1254, 1458
EcoT14I CCWWGG 1 cut(s) 1483
EcoT22I ATGCAT 1 cut(s) 52
ErhI CCWWGG 1 cut(s) 1483
Esp3I CGTCTC 1 cut(s) 1008
FaeI CATG 6 cut(s) 50, 403, 890, 1204, 1365, 1516
FatI CATG 6 cut(s) 46, 399, 886, 1200, 1361, 1512
FbaI TGATCA 1 cut(s) 970
FblI GTMKAC 2 cut(s) 124, 432
Fnu4HI GCNGC 3 cut(s) 21, 357, 1260
FokI GGATG 5 cut(s) 277, 1169, 1204, 1281, 1465
Fsp4HI GCNGC 3 cut(s) 21, 357, 1260
FspBI CTAG 7 cut(s) 81, 96, 267, 759, 768, 996, 1208
GluI GCNGC 3 cut(s) 21, 357, 1260
GsuI CTGGAG 2 cut(s) 678, 1041
HaeIII GGCC 4 cut(s) 962, 1167, 1199, 1457
HapII CCGG 4 cut(s) 24, 153, 600, 617
HgaI GACGC 2 cut(s) 59, 192
Hin1II CATG 6 cut(s) 50, 403, 890, 1204, 1365, 1516
HincII GTYRAC 3 cut(s) 125, 252, 1243
HindII GTYRAC 3 cut(s) 125, 252, 1243
HindIII AAGCTT 1 cut(s) 1382
HinfI GANTC 7 cut(s) 108, 179, 378, 513, 1204, 1349, 1472
HpaI GTTAAC 1 cut(s) 252
HpaII CCGG 4 cut(s) 24, 153, 600, 617
HphI GGTGA 2 cut(s) 331, 511
Hpy166II GTNNAC 4 cut(s) 125, 252, 433, 1243
Hpy8I GTNNAC 4 cut(s) 125, 252, 433, 1243
Hpy99I CGWCG 5 cut(s) 126, 129, 208, 848, 1508
HpyAV CCTTC 6 cut(s) 7, 842, 874, 1066, 1189, 1261
HpyCH4III ACNGT 5 cut(s) 365, 466, 1025, 1410, 1447
HpyCH4IV ACGT 2 cut(s) 127, 1302
HpyCH4V TGCA 6 cut(s) 50, 210, 356, 415, 1286, 1439
HpyF10VI GCNNNNNNNGC 1 cut(s) 26
HpyF3I CTNAG 9 cut(s) 36, 54, 368, 374, 474, 708, 719, 740, 944
HpySE526I ACGT 2 cut(s) 127, 1302
Hsp92II CATG 6 cut(s) 50, 403, 890, 1204, 1365, 1516
Ksp22I TGATCA 1 cut(s) 970
KspAI GTTAAC 1 cut(s) 252
LmnI GCTCC 1 cut(s) 26
Lsp1109I GCAGC 3 cut(s) 7, 368, 1271
LweI GCATC 5 cut(s) 59, 219, 299, 343, 1191
MaeI CTAG 7 cut(s) 81, 96, 267, 759, 768, 996, 1208
MaeII ACGT 2 cut(s) 127, 1302
MaeIII GTNAC 4 cut(s) 556, 571, 1313, 1487
MflI RGATCY 8 cut(s) 39, 57, 186, 217, 546, 901, 1046, 1065
MlsI TGGCCA 2 cut(s) 962, 1167
MluCI AATT 5 cut(s) 449, 593, 787, 1119, 1492
MluNI TGGCCA 2 cut(s) 962, 1167
MlyI GAGTC 3 cut(s) 387, 1198, 1466
Mox20I TGGCCA 2 cut(s) 962, 1167
Mph1103I ATGCAT 1 cut(s) 52
MroXI GAANNNNTTC 1 cut(s) 1095
MscI TGGCCA 2 cut(s) 962, 1167
MseI TTAA 2 cut(s) 251, 930
MslI CAYNNNNRTG 3 cut(s) 295, 398, 1360
Msp20I TGGCCA 2 cut(s) 962, 1167
MspI CCGG 4 cut(s) 24, 153, 600, 617
MspR9I CCNGG 5 cut(s) 498, 562, 980, 1256, 1460
MvaI CCWGG 5 cut(s) 498, 562, 980, 1256, 1460
MvnI CGCG 2 cut(s) 87, 203
MwoI GCNNNNNNNGC 1 cut(s) 26
NheI GCTAGC 1 cut(s) 995
NlaIII CATG 6 cut(s) 50, 403, 890, 1204, 1365, 1516
NlaIV GGNNCC 3 cut(s) 28, 194, 1067
NmeAIII GCCGAG 1 cut(s) 55
NmuCI GTSAC 2 cut(s) 1313, 1487
NruI TCGCGA 1 cut(s) 87
NsiI ATGCAT 1 cut(s) 52
NspI RCATGY 2 cut(s) 1365, 1516
PaeI GCATGC 1 cut(s) 1365
PasI CCCWGGG 1 cut(s) 979
PciI ACATGT 1 cut(s) 1512
PdmI GAANNNNTTC 1 cut(s) 1095
PfeI GAWTC 4 cut(s) 108, 179, 513, 1349
PflFI GACNNNGTC 1 cut(s) 1304
PkrI GCNGC 3 cut(s) 22, 358, 1261
PleI GAGTC 3 cut(s) 386, 1198, 1466
PpsI GAGTC 3 cut(s) 386, 1198, 1466
PpuMI RGGWCCY 1 cut(s) 925
PscI ACATGT 1 cut(s) 1512
PshAI GACNNNNGTC 1 cut(s) 849
Psp5II RGGWCCY 1 cut(s) 925
Psp6I CCWGG 5 cut(s) 496, 560, 978, 1254, 1458
PspGI CCWGG 5 cut(s) 496, 560, 978, 1254, 1458
PspN4I GGNNCC 3 cut(s) 28, 194, 1067
PspPI GGNCC 3 cut(s) 602, 925, 1456
PspPPI RGGWCCY 1 cut(s) 925
PsuI RGATCY 8 cut(s) 39, 57, 186, 217, 546, 901, 1046, 1065
PsyI GACNNNGTC 1 cut(s) 1304
RruI TCGCGA 1 cut(s) 87
RsaI GTAC 2 cut(s) 460, 1160
RsaNI GTAC 2 cut(s) 459, 1159
RseI CAYNNNNRTG 3 cut(s) 295, 398, 1360
SalI GTCGAC 1 cut(s) 123
SaqAI TTAA 2 cut(s) 251, 930
SatI GCNGC 3 cut(s) 21, 357, 1260
Sau96I GGNCC 3 cut(s) 602, 925, 1456
SchI GAGTC 3 cut(s) 387, 1198, 1466
ScrFI CCNGG 5 cut(s) 498, 562, 980, 1256, 1460
SfaNI GCATC 5 cut(s) 59, 219, 299, 343, 1191
SfcI CTRYAG 2 cut(s) 236, 751
SgrDI CGTCGACG 1 cut(s) 123
SinI GGWCC 2 cut(s) 602, 925
SmiMI CAYNNNNRTG 3 cut(s) 295, 398, 1360
SmlI CTYRAG 2 cut(s) 894, 1177
SmoI CTYRAG 2 cut(s) 894, 1177
SpeI ACTAGT 1 cut(s) 80
SphI GCATGC 1 cut(s) 1365
Sse9I AATT 5 cut(s) 449, 593, 787, 1119, 1492
SsiI CCGC 1 cut(s) 201
SspMI CTAG 7 cut(s) 81, 96, 267, 759, 768, 996, 1208
StyD4I CCNGG 5 cut(s) 496, 560, 978, 1254, 1458
StyI CCWWGG 1 cut(s) 1483
TaaI ACNGT 5 cut(s) 365, 466, 1025, 1410, 1447
TaiI ACGT 2 cut(s) 130, 1305
TaqI TCGA 5 cut(s) 124, 678, 1033, 1352, 1428
TasI AATT 5 cut(s) 449, 593, 787, 1119, 1492
TfiI GAWTC 4 cut(s) 108, 179, 513, 1349
Tru1I TTAA 2 cut(s) 251, 930
Tru9I TTAA 2 cut(s) 251, 930
TscAI CASTG 5 cut(s) 368, 781, 1288, 1318, 1362
TseFI GTSAC 2 cut(s) 1313, 1487
TseI GCWGC 3 cut(s) 20, 356, 1259
Tsp45I GTSAC 2 cut(s) 1313, 1487
TspDTI ATGAA 5 cut(s) 325, 416, 582, 903, 1208
TspGWI ACGGA 1 cut(s) 1095
TspRI CASTG 5 cut(s) 368, 781, 1288, 1318, 1362
Tth111I GACNNNGTC 1 cut(s) 1304
VpaK11BI GGWCC 2 cut(s) 602, 925
XbaI TCTAGA 1 cut(s) 1207
XceI RCATGY 2 cut(s) 1365, 1516
XmiI GTMKAC 2 cut(s) 124, 432
XmnI GAANNNNTTC 1 cut(s) 1095
XspI CTAG 7 cut(s) 81, 96, 267, 759, 768, 996, 1208
Zsp2I ATGCAT 1 cut(s) 52
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.