AT3G30200

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000178
Physical Location & Seq
Reverse (-)
11827752 .. 11834262
6511 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G30200.1

Sequence Viewer

Length: 1533 bp
ATGTCGTTCGTCCTCGATAAACTCATCGGACAAGACGCAAGCAACGGTCATCGCCGACGAAATCCGTGGAAAAGGTTAAGTATTGTTCAAGAATTCTGGTTTTTACCGGCAAGTTTTTCTTCTGGATTTAGGCATCACCATCACACAGTTTCTCCAATTGATCTTGCTACTAGTTGGAGAGCTTATAGGGAGAACCTCCAGCCTTCTACTGTACGTGGAATTCCTGATGTCAGCATTAATCCTGATCCAAAATCTGTTGAGTGTCCTTTAGAAAGTTTGGAGCTTGATCTTGCACATTATGAAGTTCCTGCTCCTACGCCTTCTGCAAACTCGTACCTTGTTTATGCGGCGGATAATGCAGAGAATCCACGATCTCTTTCAGCTTCTGGTTCATTTAATGACAGTACTCCAAAAGCAGCACAGAGAAATTCTGAAGATTCCGGTGTTACGGTTGATGGATCACCATCTGCAAAGGTAGTACTTTGTTTAGTTGCGTGGATCATGGACTTTACCGACTCAGAAACACAACAACCTGATGATCTACCAAATCTGGAAACAGATTACACTATGCCTCCTCCACTTGCCCCAGAATGTAAAAGCTTCAAATGGAAAATAGAAGTGATAGGTCAGTTAAGCAATGATGTCATGTTGCTACCCATCAACTACACTGATTGGAGGTTGGTTAGTCCACACATAAAAGACAGAGCATGGGCAGTAATTCAGTCCAAATTCAGATTTGATGATCCAATGATGAGGAAAGATTATGTGATGGGTGCACTAGGTAGCAGATGCAAGGATGTTAAATTACGTTTTTGGAGAGAACACAAACGTAACAATCTGAATGAAACGTTGGAGAATCGACCCGAAAAAGTTCCTGAAGATCAATGGTCTCATTTGGTTCACTTGAGATTCACCGATAAGTGGAGGAAAATGCAAGAACGGAATACAAAGAACCAGAAAAATCATATCATGCCTCACTTATGTGGAAGGAAGAGTTTTTCAAGAAAAAGAGACGAGATTAAAATCAAGACTGGGAAAACGCCATGTCGAGTGGAGTTTTTTATTGAGAGTCGCAAGAAACATGATGGAAGTTTCGTATCAGATGAGGCAAAATTACGCGCGATTGCACTTACGACGTTATTGAATCTAAATCCGCAAGTCACATACAACGGTACTGCTAGCTTGGATGACGAATATAGTCAGGTGTTCGGTCCAGAGCGTCCAGGCCGAGTACATTGTGTTGGTCGTGGGCCCACACCTTCAAGATTAGTGAGACATTCCAATGCAACTAGAAGAAAAGATATAGAAAATTCTGAATTAGTTGCCCAGCTGAAGACACAAGTAAAGACATTAGGTGATCAAGTTAATGCAATGTCTACGTTCCTTGGACAAATACTTGGTAATTCAACCGGTGAACAAGCAAGTGCGTGGGCTGCAAATTTTGCAACAGCTTTTGCAAACATCCCAAATCCAGCATTTGTAAACATTTCAAATCTGCCTAATCCTCAGGAAAGGGATGGTGGTGCTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

510

Amino Acids

57.64

Weight (kDa)

8.8

Isoelectric Point (pI)

45.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 293 - 420 1.7e-25 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000178)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G40087 AT3G30200
fragaria_vesca FvH4_1g23271 FvH4_3g22812 FvH4_3g22813 FvH4_3g31042 FvH4_3g31043 FvH4_7g03653
malus_domestica MD05G1321200.v1.1 MD09G1027200.v1.1 MD15G1434900.v1.1 MD15G1435000.v1.1 MD15G1435100.v1.1
prunus_persica Prupe.1G578800_v2.0.a1 Prupe.1G578800_v2.0.a1 Prupe.1G578800_v2.0.a1 Prupe.2G062700_v2.0.a1 Prupe.5G033400_v2.0.a1 Prupe.7G022900_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1
pyrus_communis pycom03g07600 pycom03g11360 pycom05g02870 pycom111g02130 pycom15g38370 pycom15g38380
rosa_chinensis RchiOBHm_Chr1g0346371 RchiOBHm_Chr4g0402051 RchiOBHm_Chr4g0414991 RchiOBHm_Chr5g0051011 RchiOBHm_Chr5g0051181 RchiOBHm_Chr6g0273071 RchiOBHm_Chr7g0218301 RchiOBHm_Chr7g0241081
rosa_laevigata RLG00000007709 RLG00000008953 RLG00000012400 RLG00000012401 RLG00000013805 RLG00000014199 RLG00000014726 RLG00000017792 RLG00000017793 RLG00000018860 RLG00000020749 RLG00000030708 RLG00000033507
rosa_multiflora Rmu_co8373761.1_g000001 Rmu_sc0000028.1_g000023 Rmu_sc0000235.1_g000040 Rmu_sc0000293.1_g000017 Rmu_sc0000293.1_g000019 Rmu_sc0000651.1_g000012 Rmu_sc0000870.1_g000051 Rmu_sc0001167.1_g000031 Rmu_sc0001373.1_g000039 Rmu_sc0001861.1_g000055 Rmu_sc0001891.1_g000038 Rmu_sc0001909.1_g000015 Rmu_sc0002500.1_g000002 Rmu_sc0002868.1_g000036 Rmu_sc0002868.1_g000038 Rmu_sc0002868.1_g000039 Rmu_sc0003379.1_g000001 Rmu_sc0003778.1_g000005 Rmu_sc0003778.1_g000006 Rmu_sc0010475.1_g000011 Rmu_sc0015271.1_g000002 Rmu_sc0015271.1_g000003 Rmu_sc0017962.1_g000001 Rmu_sc0017962.1_g000003 Rmu_sc0022129.1_g000004 Rmu_sc0025694.1_g000003 Rmu_sc0025694.1_g000004
rosa_roxburghii Rroxscaffold_1G00031640 Rroxscaffold_1G00047620 Rroxscaffold_1G00047630 Rroxscaffold_1G00050560 Rroxscaffold_1G00050570 Rroxscaffold_1G00054800 Rroxscaffold_1G00055890 Rroxscaffold_2G00108230 Rroxscaffold_3G00240860 Rroxscaffold_4G00299670 Rroxscaffold_4G00299680 Rroxscaffold_4G00299690 Rroxscaffold_4G00306320 Rroxscaffold_4G00306340 Rroxscaffold_5G00341060 Rroxscaffold_5G00342000 Rroxscaffold_5G00355660 Rroxscaffold_5G00357170 Rroxscaffold_6G00399490 Rroxscaffold_6G00408400 Rroxscaffold_7G00189260 Rroxscaffold_7G00199620 Rroxscaffold_7G00215470
rosa_rugosa Rorug02G0117600 Rorug02G0117700 Rorug04G0116400 Rorug06G0103200
rosa_samantha Rh1AG062800 Rh1AG073700 Rh1CG091700 Rh1DG077600 Rh1DG077700 Rh1DG077800 Rh1DG117400 Rh1DG146300 Rh2BG193300 Rh2BG193400 Rh2BG265300 Rh2BG413400 Rh3CG365500 Rh4AG315400 Rh4BG323100 Rh4BG323200 Rh4CG071400 Rh4CG142500 Rh4CG203300 Rh4CG338300 Rh4DG079300 Rh4DG079400 Rh4DG217000 Rh4DG217100 Rh4DG217200 Rh4DG217300 Rh5AG128300 Rh5AG239900 Rh5AG465900 Rh5BG348600 Rh5BG387900 Rh5BG388000 Rh5CG181800 Rh5CG181900 Rh5CG271000 Rh5CG271100 Rh5DG127100 Rh5DG138400 Rh5DG168200 Rh5DG168300 Rh5DG361500 Rh5DG460400 Rh6AG045400 Rh6AG058600 Rh6BG275000 Rh6CG089700 Rh6DG182300 Rh6DG182400 Rh6DG207300 Rh6DG207400 Rh7BG374000 Rh7BG390600 Rh7BG390700 Rh7BG390800
rosa_wichuraiana Rw0G018690 Rw1G007320 Rw4G008510 Rw5G011510 Rw5G021830 Rw6G024150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1376
AccII CGCG 2 cut(s) 1119, 1121
AciI CCGC 3 cut(s) 347, 350, 1154
AclI AACGTT 1 cut(s) 848
AclWI GGATC 4 cut(s) 239, 466, 506, 737
AcsI RAATTY 6 cut(s) 92, 219, 427, 728, 1309, 1438
AcuI CTGAAG 3 cut(s) 453, 897, 1352
AfaI GTAC 6 cut(s) 213, 335, 406, 480, 1174, 1233
AfiI CCNNNNNNNGG 1 cut(s) 921
AgeI ACCGGT 1 cut(s) 1409
AgsI TTSAA 7 cut(s) 89, 604, 1002, 1144, 1263, 1407, 1491
AhlI ACTAGT 1 cut(s) 170
AjnI CCWGG 1 cut(s) 1222
AjuI GAANNNNNNNTTGG 2 cut(s) 833, 865
AleI CACNNNNGTG 1 cut(s) 981
AluBI AGCT 8 cut(s) 182, 283, 383, 600, 1182, 1330, 1451, 1530
AluI AGCT 8 cut(s) 182, 283, 383, 600, 1182, 1330, 1451, 1530
Alw21I GWGCWC 1 cut(s) 778
Alw26I GTCTC 3 cut(s) 894, 1005, 1267
Alw44I GTGCAC 1 cut(s) 774
AlwI GGATC 4 cut(s) 239, 466, 506, 737
AlwNI CAGNNNCTG 1 cut(s) 386
AoxI GGCC 2 cut(s) 1225, 1250
ApaI GGGCCC 1 cut(s) 1254
ApaLI GTGCAC 1 cut(s) 774
ApeKI GCWGC 2 cut(s) 416, 1433
ApoI RAATTY 6 cut(s) 92, 219, 427, 728, 1309, 1438
AseI ATTAAT 1 cut(s) 237
AsiGI ACCGGT 1 cut(s) 1409
Asp700I GAANNNNTTC 1 cut(s) 870
AspLEI GCGC 1 cut(s) 1121
AspS9I GGNCC 3 cut(s) 1211, 1250, 1251
AsuHPI GGTGA 5 cut(s) 128, 453, 904, 1367, 1424
AsuNHI GCTAGC 2 cut(s) 1178, 1526
AvaII GGWCC 1 cut(s) 1211
AxyI CCTNAGG 1 cut(s) 1506
BaeGI GKGCMC 2 cut(s) 778, 1254
BanII GRGCYC 1 cut(s) 1254
BbsI GAAGAC 1 cut(s) 1340
Bbv12I GWGCWC 1 cut(s) 778
BbvI GCAGC 2 cut(s) 428, 1420
BccI CCATC 7 cut(s) 147, 449, 472, 665, 763, 1079, 1511
BciT130I CCWGG 1 cut(s) 1224
BclI TGATCA 1 cut(s) 1357
BcoDI GTCTC 3 cut(s) 894, 1005, 1267
BcuI ACTAGT 1 cut(s) 170
BfaI CTAG 6 cut(s) 171, 779, 1179, 1290, 1527, 1531
BisI GCNGC 3 cut(s) 348, 417, 1434
BlsI GCNGC 3 cut(s) 349, 418, 1435
BmcAI AGTACT 2 cut(s) 406, 480
Bme1390I CCNGG 1 cut(s) 1224
Bme18I GGWCC 1 cut(s) 1211
BmgT120I GGNCC 3 cut(s) 1211, 1250, 1251
BmiI GGNNCC 1 cut(s) 1252
BmrFI CCNGG 1 cut(s) 1224
BmrI ACTGGG 1 cut(s) 1041
BmsI GCATC 2 cut(s) 142, 779
BmtI GCTAGC 2 cut(s) 1182, 1530
BmuI ACTGGG 1 cut(s) 1041
BpiI GAAGAC 1 cut(s) 1340
BpmI CTGGAG 1 cut(s) 182
BpuEI CTTGAG 1 cut(s) 925
BsaAI YACGTR 1 cut(s) 215
BsaBI GATNNNNATC 2 cut(s) 463, 1022
BsaI GGTCTC 1 cut(s) 894
BsaJI CCNNGG 2 cut(s) 65, 1384
BsaWI WCCGGW 2 cut(s) 440, 1409
BsaXI ACNNNNNCTCC 4 cut(s) 136, 166, 556, 586
Bsc4I CCNNNNNNNGG 1 cut(s) 921
Bse118I RCCGGY 2 cut(s) 106, 1409
Bse1I ACTGG 1 cut(s) 1036
Bse21I CCTNAGG 1 cut(s) 1506
Bse3DI GCAATG 2 cut(s) 643, 1377
Bse8I GATNNNNATC 2 cut(s) 463, 1022
BseBI CCWGG 1 cut(s) 1224
BseDI CCNNGG 2 cut(s) 65, 1384
BseGI GGATG 4 cut(s) 802, 1192, 1461, 1522
BseJI GATNNNNATC 2 cut(s) 463, 1022
BseLI CCNNNNNNNGG 1 cut(s) 921
BseMI GCAATG 2 cut(s) 643, 1377
BseMII CTCAG 2 cut(s) 531, 1520
BseNI ACTGG 1 cut(s) 1036
BseRI GAGGAG 1 cut(s) 564
BseSI GKGCMC 2 cut(s) 778, 1254
BseXI GCAGC 2 cut(s) 428, 1420
BseYI CCCAGC 1 cut(s) 1326
Bsh1236I CGCG 2 cut(s) 1119, 1121
BshFI GGCC 2 cut(s) 1227, 1252
BshTI ACCGGT 1 cut(s) 1409
BsiHKAI GWGCWC 1 cut(s) 778
BsiSI CCGG 3 cut(s) 107, 441, 1410
BslI CCNNNNNNNGG 1 cut(s) 921
BsmAI GTCTC 3 cut(s) 894, 1005, 1267
BsmBI CGTCTC 1 cut(s) 1005
BsnI GGCC 2 cut(s) 1227, 1252
Bso31I GGTCTC 1 cut(s) 894
Bsp120I GGGCCC 1 cut(s) 1250
Bsp1286I GDGCHC 2 cut(s) 778, 1254
BspACI CCGC 3 cut(s) 347, 350, 1154
BspANI GGCC 2 cut(s) 1227, 1252
BspCNI CTCAG 2 cut(s) 530, 1519
BspFNI CGCG 2 cut(s) 1119, 1121
BspLI GGNNCC 1 cut(s) 1252
BspOI GCTAGC 2 cut(s) 1182, 1530
BspPI GGATC 4 cut(s) 239, 466, 506, 737
BspTNI GGTCTC 1 cut(s) 894
BsrDI GCAATG 2 cut(s) 643, 1377
BsrFI RCCGGY 2 cut(s) 106, 1409
BsrI ACTGG 1 cut(s) 1036
BssAI RCCGGY 2 cut(s) 106, 1409
BssECI CCNNGG 2 cut(s) 65, 1384
BssT1I CCWWGG 1 cut(s) 1384
Bst2UI CCWGG 1 cut(s) 1224
Bst4CI ACNGT 6 cut(s) 47, 148, 211, 404, 451, 1172
Bst6I CTCTTC 1 cut(s) 986
BstAPI GCANNNNNTGC 1 cut(s) 1442
BstBAI YACGTR 1 cut(s) 215
BstC8I GCNNGC 3 cut(s) 40, 1180, 1528
BstDEI CTNAG 2 cut(s) 517, 1506
BstDSI CCRYGG 1 cut(s) 65
BstF5I GGATG 4 cut(s) 802, 1192, 1461, 1522
BstFNI CGCG 2 cut(s) 1119, 1121
BstHHI GCGC 1 cut(s) 1121
BstMAI GTCTC 3 cut(s) 894, 1005, 1267
BstMWI GCNNNNNNNGC 3 cut(s) 356, 1433, 1442
BstNI CCWGG 1 cut(s) 1224
BstSCI CCNGG 1 cut(s) 1222
BstSLI GKGCMC 2 cut(s) 778, 1254
BstUI CGCG 2 cut(s) 1119, 1121
BstV1I GCAGC 2 cut(s) 428, 1420
BstV2I GAAGAC 1 cut(s) 1340
Bsu36I CCTNAGG 1 cut(s) 1506
BsuRI GGCC 2 cut(s) 1227, 1252
BtgI CCRYGG 1 cut(s) 65
BtgZI GCGATG 1 cut(s) 35
BtsCI GGATG 4 cut(s) 802, 1192, 1461, 1522
BtsIMutI CAGTG 1 cut(s) 666
Cac8I GCNNGC 3 cut(s) 40, 1180, 1528
CaiI CAGNNNCTG 1 cut(s) 386
CfoI GCGC 1 cut(s) 1121
Cfr10I RCCGGY 2 cut(s) 106, 1409
Cfr13I GGNCC 3 cut(s) 1211, 1250, 1251
CseI GACGC 2 cut(s) 44, 1208
Csp6I GTAC 6 cut(s) 212, 334, 405, 479, 1173, 1232
CspAI ACCGGT 1 cut(s) 1409
CviAII CATG 6 cut(s) 502, 646, 708, 970, 1044, 1082
CviQI GTAC 6 cut(s) 212, 334, 405, 479, 1173, 1232
DdeI CTNAG 2 cut(s) 517, 1506
Eam1104I CTCTTC 1 cut(s) 986
EarI CTCTTC 1 cut(s) 986
EciI GGCGGA 1 cut(s) 365
Eco130I CCWWGG 1 cut(s) 1384
Eco24I GRGCYC 1 cut(s) 1254
Eco31I GGTCTC 1 cut(s) 894
Eco47I GGWCC 1 cut(s) 1211
Eco57I CTGAAG 3 cut(s) 453, 897, 1352
Eco81I CCTNAGG 1 cut(s) 1506
EcoRI GAATTC 2 cut(s) 92, 219
EcoRII CCWGG 1 cut(s) 1222
EcoT14I CCWWGG 1 cut(s) 1384
EcoT38I GRGCYC 1 cut(s) 1254
ErhI CCWWGG 1 cut(s) 1384
Esp3I CGTCTC 1 cut(s) 1005
FaeI CATG 6 cut(s) 505, 649, 711, 973, 1047, 1085
FalI AAGNNNNNCTT 2 cut(s) 103, 135
FatI CATG 6 cut(s) 501, 645, 707, 969, 1043, 1081
FbaI TGATCA 1 cut(s) 1357
FblI GTMKAC 1 cut(s) 1376
Fnu4HI GCNGC 3 cut(s) 348, 417, 1434
FokI GGATG 4 cut(s) 809, 1199, 1448, 1529
FriOI GRGCYC 1 cut(s) 1254
Fsp4HI GCNGC 3 cut(s) 348, 417, 1434
FspBI CTAG 6 cut(s) 171, 779, 1179, 1290, 1527, 1531
GlaI GCGC 1 cut(s) 1120
GluI GCNGC 3 cut(s) 348, 417, 1434
GsaI CCCAGC 1 cut(s) 1330
GsuI CTGGAG 1 cut(s) 182
HaeIII GGCC 2 cut(s) 1227, 1252
HapII CCGG 3 cut(s) 107, 441, 1410
HgaI GACGC 2 cut(s) 44, 1208
HhaI GCGC 1 cut(s) 1121
Hin1II CATG 6 cut(s) 505, 649, 711, 973, 1047, 1085
Hin6I GCGC 1 cut(s) 1119
HinP1I GCGC 1 cut(s) 1119
HindIII AAGCTT 1 cut(s) 598
HinfI GANTC 7 cut(s) 364, 437, 515, 856, 909, 1069, 1144
HpaII CCGG 3 cut(s) 107, 441, 1410
HphI GGTGA 5 cut(s) 128, 453, 904, 1367, 1424
Hpy166II GTNNAC 6 cut(s) 689, 776, 901, 1377, 1415, 1483
Hpy188I TCNGA 7 cut(s) 29, 433, 520, 734, 840, 1102, 1315
Hpy8I GTNNAC 6 cut(s) 689, 776, 901, 1377, 1415, 1483
Hpy99I CGWCG 2 cut(s) 60, 1138
HpyAV CCTTC 4 cut(s) 213, 330, 981, 1269
HpyCH4III ACNGT 6 cut(s) 47, 148, 211, 404, 451, 1172
HpyCH4IV ACGT 6 cut(s) 214, 808, 829, 848, 1136, 1379
HpyF10VI GCNNNNNNNGC 3 cut(s) 356, 1433, 1442
HpyF3I CTNAG 2 cut(s) 517, 1506
HpySE526I ACGT 6 cut(s) 214, 808, 829, 848, 1136, 1379
Hsp92II CATG 6 cut(s) 505, 649, 711, 973, 1047, 1085
HspAI GCGC 1 cut(s) 1119
Ksp22I TGATCA 1 cut(s) 1357
LmnI GCTCC 2 cut(s) 280, 316
Lsp1109I GCAGC 2 cut(s) 428, 1420
LweI GCATC 2 cut(s) 142, 779
MaeI CTAG 6 cut(s) 171, 779, 1179, 1290, 1527, 1531
MaeII ACGT 6 cut(s) 214, 808, 829, 848, 1136, 1379
MaeIII GTNAC 3 cut(s) 445, 830, 1159
MboII GAAGA 6 cut(s) 111, 446, 890, 1003, 1305, 1345
MfeI CAATTG 1 cut(s) 156
MhlI GDGCHC 2 cut(s) 778, 1254
MlyI GAGTC 2 cut(s) 509, 1078
MmeI TCCRAC 2 cut(s) 155, 831
MroXI GAANNNNTTC 1 cut(s) 870
MseI TTAA 7 cut(s) 77, 237, 396, 632, 801, 1020, 1365
MslI CAYNNNNRTG 2 cut(s) 981, 1281
MspA1I CMGCKG 1 cut(s) 1330
MspI CCGG 3 cut(s) 107, 441, 1410
MspR9I CCNGG 1 cut(s) 1224
MunI CAATTG 1 cut(s) 156
MvaI CCWGG 1 cut(s) 1224
MvnI CGCG 2 cut(s) 1119, 1121
MwoI GCNNNNNNNGC 3 cut(s) 356, 1433, 1442
NheI GCTAGC 2 cut(s) 1178, 1526
NlaIII CATG 6 cut(s) 505, 649, 711, 973, 1047, 1085
NlaIV GGNNCC 1 cut(s) 1252
NmeAIII GCCGAG 1 cut(s) 1253
NmuCI GTSAC 1 cut(s) 1159
OliI CACNNNNGTG 1 cut(s) 981
PdmI GAANNNNTTC 1 cut(s) 870
PfeI GAWTC 5 cut(s) 364, 437, 856, 909, 1144
PinAI ACCGGT 1 cut(s) 1409
PkrI GCNGC 3 cut(s) 349, 418, 1435
PleI GAGTC 2 cut(s) 509, 1077
PpsI GAGTC 2 cut(s) 509, 1077
Ppu21I YACGTR 1 cut(s) 215
PshBI ATTAAT 1 cut(s) 237
Psp1406I AACGTT 1 cut(s) 848
Psp6I CCWGG 1 cut(s) 1222
PspFI CCCAGC 1 cut(s) 1326
PspGI CCWGG 1 cut(s) 1222
PspN4I GGNNCC 1 cut(s) 1252
PspOMI GGGCCC 1 cut(s) 1250
PspPI GGNCC 3 cut(s) 1211, 1250, 1251
PstNI CAGNNNCTG 1 cut(s) 386
PvuII CAGCTG 1 cut(s) 1330
RsaI GTAC 6 cut(s) 213, 335, 406, 480, 1174, 1233
RsaNI GTAC 6 cut(s) 212, 334, 405, 479, 1173, 1232
RseI CAYNNNNRTG 2 cut(s) 981, 1281
SaqAI TTAA 7 cut(s) 77, 237, 396, 632, 801, 1020, 1365
SatI GCNGC 3 cut(s) 348, 417, 1434
Sau96I GGNCC 3 cut(s) 1211, 1250, 1251
ScaI AGTACT 2 cut(s) 406, 480
SchI GAGTC 2 cut(s) 509, 1078
ScrFI CCNGG 1 cut(s) 1224
SduI GDGCHC 2 cut(s) 778, 1254
SfaNI GCATC 2 cut(s) 142, 779
SinI GGWCC 1 cut(s) 1211
SmiMI CAYNNNNRTG 2 cut(s) 981, 1281
SmlI CTYRAG 1 cut(s) 904
SmoI CTYRAG 1 cut(s) 904
SpeI ACTAGT 1 cut(s) 170
SsiI CCGC 3 cut(s) 347, 350, 1154
SspMI CTAG 6 cut(s) 171, 779, 1179, 1290, 1527, 1531
StyD4I CCNGG 1 cut(s) 1222
StyI CCWWGG 1 cut(s) 1384
TaaI ACNGT 6 cut(s) 47, 148, 211, 404, 451, 1172
TaiI ACGT 6 cut(s) 217, 811, 832, 851, 1139, 1382
TaqI TCGA 3 cut(s) 15, 859, 1048
TaqII GACCGA 1 cut(s) 1199
TatI WGTACW 3 cut(s) 404, 478, 1231
TauI GCSGC 1 cut(s) 350
TfiI GAWTC 5 cut(s) 364, 437, 856, 909, 1144
Tru1I TTAA 7 cut(s) 77, 237, 396, 632, 801, 1020, 1365
Tru9I TTAA 7 cut(s) 77, 237, 396, 632, 801, 1020, 1365
TscAI CASTG 1 cut(s) 673
TseFI GTSAC 1 cut(s) 1159
TseI GCWGC 2 cut(s) 416, 1433
Tsp45I GTSAC 1 cut(s) 1159
TspDTI ATGAA 3 cut(s) 315, 381, 858
TspGWI ACGGA 2 cut(s) 54, 955
TspRI CASTG 1 cut(s) 673
VneI GTGCAC 1 cut(s) 774
VpaK11BI GGWCC 1 cut(s) 1211
VspI ATTAAT 1 cut(s) 237
XapI RAATTY 6 cut(s) 92, 219, 427, 728, 1309, 1438
XmiI GTMKAC 1 cut(s) 1376
XmnI GAANNNNTTC 1 cut(s) 870
XspI CTAG 6 cut(s) 171, 779, 1179, 1290, 1527, 1531
ZrmI AGTACT 2 cut(s) 406, 480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.