pycom111g02130

bromo domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
OG0000178
Physical Location & Seq
Reverse (-)
1271527 .. 1274934
3408 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g02130.6

Sequence Viewer

Length: 1446 bp
ATGGAGAGTGACTGGTCAGATGGTGATCAAAATGCAAGCACCGTGGTGCAGAACTTGCTTAGCAGGTATGGTGAAGGTGATCTCCAGATGGGAAACTCATCCAACCAGAATGATCACGCACAAAATATGCCATTGACCGTCTTAGGTTCTTGGAGTAGAGTCCAGAATGAGCAAGTAATGCCGTTGCAGGATCCTCCCTGTAACAAGAAAGAATTGAGTGCTGCCCTGGCGGTCATTAAGAAGGTTATGAAAATGGATGCAGCTGTACCTTTCAACACTCCCGTGGATCCAGTTGCTATGAGATTACCTGATTACTTTGATGTTGTAGAGACACCAATGGATTTTGGAACTATATGCAGCCATCTTCAAAATGGTACCAAGTATATGAACGCGGAGGATGTATTCAAGGATGTCCAATACATTTGGAAGAACTGTTGCAACTATTACAATGAGGGTAACTTTGTTTTGAACCTTATGAAACGCGTGGAGGAGAAATTCATGAAATATTGGACAGCTGCTGGTTTGTGCAGTAAAGAACCCGGGGCAAGTAACCAAGCGTTTCAAAGTCGAAGATCACATGAAATGGGTTTTGTGTTAGAGCTTGGGATCGATCAGATTCATAGATCCTACAACAGTTATCGGCATCACCTGAAGACGACGTGGTTTGAAACATGTGAGACGACTGAGGAAGCACGTGAAAAAGTACCACCAAATGTTACAGAGGAGGATTGGCAGTATCTTGTAAACTTGTGGACCTCACCTGAATGGCAGAAAATCAGTAAGCAATACAAGGAGAATCGTTCCAAGAATACCATAATTCACACGTGTGGGTCCAAGAGCTTCTCGCAAGTCCTCGAGGAAGAGAAAAAGAAGACTGGAAATGAGCCTGGCCGTACACTTTTCTGGGAACGCACCCATGTTCGGCCTGATGGACAGGCTCCAAATCCAGCTACACAGGAGGCATTGTCAAAGCTCAAGAAATTGTATGCTCAAATGGCTGCGGAGAACTCACAGATGACAGAAGACGAGATTTTTGTAAAGGTTTTTGGACCTGAGCGTCCCTCGAGATTACGTGGTTACGGTGGTGTAACCCCAAAAGAGTTATGGGGAACACCGTCATCGTCATCGTCATATACTGTTAGTGAACTCAAAAGGCAACTTGAAGAAGCAAAGCAGCGACAAGAAGAGTATGAACAAAAGAGTGCAGCTGAGATACAGGGCTTGAAAGAGCAATTTGGTCGTCTTGAGGGTTTGCTGTCAGATCAAATGAATAGGTTTGAAGGTTTACTAGTACAGTTGACGAGTCATATGCAGCCCCCTGCCCCGATCGAGAGGCCTACTGGAAATCTACTCACCCGAAATGGTATGCCATCCACGGAGTTTCCGATCCAGAAGATGAAATCTCATCACTTATCAGCTATGCCTCTGTCTTGTTGGGTTAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bromodomain Transposase_24

Protein Analysis

482

Amino Acids

55.02

Weight (kDa)

6.07

Isoelectric Point (pI)

46.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000178)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G40087 AT3G30200
fragaria_vesca FvH4_1g23271 FvH4_3g22812 FvH4_3g22813 FvH4_3g31042 FvH4_3g31043 FvH4_7g03653
malus_domestica MD05G1321200.v1.1 MD09G1027200.v1.1 MD15G1434900.v1.1 MD15G1435000.v1.1 MD15G1435100.v1.1
prunus_persica Prupe.1G578800_v2.0.a1 Prupe.1G578800_v2.0.a1 Prupe.1G578800_v2.0.a1 Prupe.2G062700_v2.0.a1 Prupe.5G033400_v2.0.a1 Prupe.7G022900_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1
pyrus_communis pycom03g07600 pycom03g11360 pycom05g02870 pycom111g02130 pycom15g38370 pycom15g38380
rosa_chinensis RchiOBHm_Chr1g0346371 RchiOBHm_Chr4g0402051 RchiOBHm_Chr4g0414991 RchiOBHm_Chr5g0051011 RchiOBHm_Chr5g0051181 RchiOBHm_Chr6g0273071 RchiOBHm_Chr7g0218301 RchiOBHm_Chr7g0241081
rosa_laevigata RLG00000007709 RLG00000008953 RLG00000012400 RLG00000012401 RLG00000013805 RLG00000014199 RLG00000014726 RLG00000017792 RLG00000017793 RLG00000018860 RLG00000020749 RLG00000030708 RLG00000033507
rosa_multiflora Rmu_co8373761.1_g000001 Rmu_sc0000028.1_g000023 Rmu_sc0000235.1_g000040 Rmu_sc0000293.1_g000017 Rmu_sc0000293.1_g000019 Rmu_sc0000651.1_g000012 Rmu_sc0000870.1_g000051 Rmu_sc0001167.1_g000031 Rmu_sc0001373.1_g000039 Rmu_sc0001861.1_g000055 Rmu_sc0001891.1_g000038 Rmu_sc0001909.1_g000015 Rmu_sc0002500.1_g000002 Rmu_sc0002868.1_g000036 Rmu_sc0002868.1_g000038 Rmu_sc0002868.1_g000039 Rmu_sc0003379.1_g000001 Rmu_sc0003778.1_g000005 Rmu_sc0003778.1_g000006 Rmu_sc0010475.1_g000011 Rmu_sc0015271.1_g000002 Rmu_sc0015271.1_g000003 Rmu_sc0017962.1_g000001 Rmu_sc0017962.1_g000003 Rmu_sc0022129.1_g000004 Rmu_sc0025694.1_g000003 Rmu_sc0025694.1_g000004
rosa_roxburghii Rroxscaffold_1G00031640 Rroxscaffold_1G00047620 Rroxscaffold_1G00047630 Rroxscaffold_1G00050560 Rroxscaffold_1G00050570 Rroxscaffold_1G00054800 Rroxscaffold_1G00055890 Rroxscaffold_2G00108230 Rroxscaffold_3G00240860 Rroxscaffold_4G00299670 Rroxscaffold_4G00299680 Rroxscaffold_4G00299690 Rroxscaffold_4G00306320 Rroxscaffold_4G00306340 Rroxscaffold_5G00341060 Rroxscaffold_5G00342000 Rroxscaffold_5G00355660 Rroxscaffold_5G00357170 Rroxscaffold_6G00399490 Rroxscaffold_6G00408400 Rroxscaffold_7G00189260 Rroxscaffold_7G00199620 Rroxscaffold_7G00215470
rosa_rugosa Rorug02G0117600 Rorug02G0117700 Rorug04G0116400 Rorug06G0103200
rosa_samantha Rh1AG062800 Rh1AG073700 Rh1CG091700 Rh1DG077600 Rh1DG077700 Rh1DG077800 Rh1DG117400 Rh1DG146300 Rh2BG193300 Rh2BG193400 Rh2BG265300 Rh2BG413400 Rh3CG365500 Rh4AG315400 Rh4BG323100 Rh4BG323200 Rh4CG071400 Rh4CG142500 Rh4CG203300 Rh4CG338300 Rh4DG079300 Rh4DG079400 Rh4DG217000 Rh4DG217100 Rh4DG217200 Rh4DG217300 Rh5AG128300 Rh5AG239900 Rh5AG465900 Rh5BG348600 Rh5BG387900 Rh5BG388000 Rh5CG181800 Rh5CG181900 Rh5CG271000 Rh5CG271100 Rh5DG127100 Rh5DG138400 Rh5DG168200 Rh5DG168300 Rh5DG361500 Rh5DG460400 Rh6AG045400 Rh6AG058600 Rh6BG275000 Rh6CG089700 Rh6DG182300 Rh6DG182400 Rh6DG207300 Rh6DG207400 Rh7BG374000 Rh7BG390600 Rh7BG390700 Rh7BG390800
rosa_wichuraiana Rw0G018690 Rw1G007320 Rw4G008510 Rw5G011510 Rw5G021830 Rw6G024150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1056
AbsI CCTCGAGG 1 cut(s) 854
Acc36I ACCTGC 1 cut(s) 54
Acc65I GGTACC 1 cut(s) 374
AccB1I GGYRCC 1 cut(s) 374
AccII CGCG 2 cut(s) 392, 483
AciI CCGC 3 cut(s) 230, 392, 1001
AclWI GGATC 7 cut(s) 185, 198, 281, 294, 614, 618, 1381
AcoI YGGCCR 1 cut(s) 889
AcsI RAATTY 1 cut(s) 494
AcuI CTGAAG 1 cut(s) 671
AcvI CACGTG 2 cut(s) 695, 825
AfaI GTAC 5 cut(s) 267, 376, 705, 895, 1293
AfiI CCNNNNNNNGG 1 cut(s) 921
AflIII ACRYGT 4 cut(s) 481, 671, 822, 824
AgsI TTSAA 9 cut(s) 274, 368, 406, 469, 563, 668, 1163, 1225, 1280
AhlI ACTAGT 1 cut(s) 1288
AjiI CACGTC 1 cut(s) 660
AjnI CCWGG 2 cut(s) 225, 886
AleI CACNNNNGTG 3 cut(s) 44, 281, 825
AluBI AGCT 8 cut(s) 263, 515, 601, 840, 950, 973, 1208, 1418
AluI AGCT 8 cut(s) 263, 515, 601, 840, 950, 973, 1208, 1418
Alw26I GTCTC 2 cut(s) 323, 671
AlwI GGATC 7 cut(s) 185, 198, 281, 294, 614, 618, 1381
AlwNI CAGNNNCTG 1 cut(s) 518
Ama87I CYCGRG 3 cut(s) 539, 854, 1063
AoxI GGCC 3 cut(s) 889, 923, 1334
ApeKI GCWGC 8 cut(s) 221, 260, 357, 515, 998, 1174, 1205, 1312
ApoI RAATTY 1 cut(s) 494
ArsI GACNNNNNNTTYG 2 cut(s) 1016, 1048
Asp718I GGTACC 1 cut(s) 374
AspS9I GGNCC 3 cut(s) 753, 831, 1049
AsuC2I CCSGG 2 cut(s) 540, 541
AsuHPI GGTGA 6 cut(s) 35, 83, 89, 638, 750, 1345
AvaI CYCGRG 3 cut(s) 539, 854, 1063
AvaII GGWCC 3 cut(s) 753, 831, 1049
BamHI GGATCC 2 cut(s) 190, 286
BanI GGYRCC 1 cut(s) 374
BbrPI CACGTG 2 cut(s) 695, 825
BbsI GAAGAC 3 cut(s) 659, 878, 1029
BbvI GCAGC 8 cut(s) 208, 272, 369, 502, 985, 1186, 1217, 1324
BccI CCATC 5 cut(s) 14, 82, 369, 923, 1378
BceAI ACGGC 2 cut(s) 166, 876
BcgI CGANNNNNNTGC 4 cut(s) 1220, 1254, 1291, 1325
BciT130I CCWGG 2 cut(s) 227, 888
BclI TGATCA 2 cut(s) 25, 112
BcnI CCSGG 2 cut(s) 540, 541
BcoDI GTCTC 2 cut(s) 323, 671
BcuI ACTAGT 1 cut(s) 1288
BfaI CTAG 1 cut(s) 1289
BfuAI ACCTGC 1 cut(s) 54
BisI GCNGC 8 cut(s) 222, 261, 358, 516, 999, 1175, 1206, 1313
BlpI GCTNAGC 1 cut(s) 59
BlsI GCNGC 8 cut(s) 223, 262, 359, 517, 1000, 1176, 1207, 1314
Bme1390I CCNGG 4 cut(s) 227, 540, 541, 888
Bme18I GGWCC 3 cut(s) 753, 831, 1049
BmeT110I CYCGRG 3 cut(s) 539, 854, 1063
BmgBI CACGTC 1 cut(s) 660
BmgT120I GGNCC 3 cut(s) 753, 831, 1049
BmiI GGNNCC 5 cut(s) 192, 288, 376, 832, 939
BmrFI CCNGG 4 cut(s) 227, 540, 541, 888
BmsI GCATC 2 cut(s) 247, 652
BpiI GAAGAC 3 cut(s) 659, 878, 1029
BplI GAGNNNNNCTC 2 cut(s) 1046, 1078
BpmI CTGGAG 1 cut(s) 68
Bpu10I CCTNAGC 1 cut(s) 1053
Bpu1102I GCTNAGC 1 cut(s) 59
BpuEI CTTGAG 2 cut(s) 959, 1265
BpuMI CCSGG 2 cut(s) 540, 541
Bsa29I ATCGAT 1 cut(s) 609
BsaAI YACGTR 3 cut(s) 695, 825, 1073
BsaBI GATNNNNATC 1 cut(s) 24
BsaJI CCNNGG 6 cut(s) 42, 225, 282, 539, 540, 1374
BsaXI ACNNNNNCTCC 2 cut(s) 950, 980
Bsc4I CCNNNNNNNGG 1 cut(s) 921
Bse1I ACTGG 4 cut(s) 17, 290, 880, 1345
Bse8I GATNNNNATC 1 cut(s) 24
BseBI CCWGG 2 cut(s) 227, 888
BseCI ATCGAT 1 cut(s) 609
BseDI CCNNGG 6 cut(s) 42, 225, 282, 539, 540, 1374
BseGI GGATG 5 cut(s) 98, 262, 403, 415, 1370
BseJI GATNNNNATC 1 cut(s) 24
BseLI CCNNNNNNNGG 1 cut(s) 921
BseMII CTCAG 3 cut(s) 675, 1044, 1200
BseNI ACTGG 4 cut(s) 17, 290, 880, 1345
BseRI GAGGAG 2 cut(s) 503, 737
BseXI GCAGC 8 cut(s) 208, 272, 369, 502, 985, 1186, 1217, 1324
BsgI GTGCAG 3 cut(s) 68, 547, 1224
Bsh1236I CGCG 2 cut(s) 392, 483
Bsh1285I CGRYCG 1 cut(s) 1329
BshFI GGCC 3 cut(s) 891, 925, 1336
BshNI GGYRCC 1 cut(s) 374
BshVI ATCGAT 1 cut(s) 609
BsiEI CGRYCG 1 cut(s) 1329
BsiHKCI CYCGRG 3 cut(s) 539, 854, 1063
BsiSI CCGG 1 cut(s) 540
BslFI GGGAC 1 cut(s) 1044
BslI CCNNNNNNNGG 1 cut(s) 921
BsmAI GTCTC 2 cut(s) 323, 671
BsmBI CGTCTC 1 cut(s) 671
BsmFI GGGAC 1 cut(s) 1044
BsnI GGCC 3 cut(s) 891, 925, 1336
BsoBI CYCGRG 3 cut(s) 539, 854, 1063
Bsp1720I GCTNAGC 1 cut(s) 59
BspACI CCGC 3 cut(s) 230, 392, 1001
BspANI GGCC 3 cut(s) 891, 925, 1336
BspCNI CTCAG 3 cut(s) 676, 1045, 1201
BspDI ATCGAT 1 cut(s) 609
BspFNI CGCG 2 cut(s) 392, 483
BspHI TCATGA 1 cut(s) 498
BspLI GGNNCC 5 cut(s) 192, 288, 376, 832, 939
BspMI ACCTGC 1 cut(s) 54
BspPI GGATC 7 cut(s) 185, 198, 281, 294, 614, 618, 1381
BspT107I GGYRCC 1 cut(s) 374
BsrI ACTGG 4 cut(s) 17, 290, 880, 1345
BssECI CCNNGG 6 cut(s) 42, 225, 282, 539, 540, 1374
Bst2UI CCWGG 2 cut(s) 227, 888
Bst4CI ACNGT 8 cut(s) 43, 139, 434, 635, 1082, 1116, 1138, 1296
Bst6I CTCTTC 2 cut(s) 855, 1179
BstAPI GCANNNNNTGC 2 cut(s) 55, 178
BstBAI YACGTR 3 cut(s) 695, 825, 1073
BstC8I GCNNGC 1 cut(s) 37
BstDEI CTNAG 5 cut(s) 59, 142, 684, 1053, 1209
BstDSI CCRYGG 3 cut(s) 42, 282, 1374
BstF5I GGATG 5 cut(s) 98, 262, 403, 415, 1370
BstFNI CGCG 2 cut(s) 392, 483
BstMAI GTCTC 2 cut(s) 323, 671
BstMCI CGRYCG 1 cut(s) 1329
BstMWI GCNNNNNNNGC 4 cut(s) 55, 178, 227, 995
BstNI CCWGG 2 cut(s) 227, 888
BstNSI RCATGY 1 cut(s) 675
BstSCI CCNGG 4 cut(s) 225, 538, 539, 886
BstUI CGCG 2 cut(s) 392, 483
BstV1I GCAGC 8 cut(s) 208, 272, 369, 502, 985, 1186, 1217, 1324
BstV2I GAAGAC 3 cut(s) 659, 878, 1029
BstX2I RGATCY 3 cut(s) 190, 286, 623
BstYI RGATCY 3 cut(s) 190, 286, 623
Bsu15I ATCGAT 1 cut(s) 609
BsuRI GGCC 3 cut(s) 891, 925, 1336
BsuTUI ATCGAT 1 cut(s) 609
BtgI CCRYGG 3 cut(s) 42, 282, 1374
BtrI CACGTC 1 cut(s) 660
BtsCI GGATG 5 cut(s) 98, 262, 403, 415, 1370
BveI ACCTGC 1 cut(s) 54
Cac8I GCNNGC 1 cut(s) 37
CaiI CAGNNNCTG 1 cut(s) 518
CciI TCATGA 1 cut(s) 498
Cfr13I GGNCC 3 cut(s) 753, 831, 1049
Cfr9I CCCGGG 1 cut(s) 539
ClaI ATCGAT 1 cut(s) 609
CseI GACGC 1 cut(s) 1046
Csp6I GTAC 5 cut(s) 266, 375, 704, 894, 1292
CspCI CAANNNNNGTGG 2 cut(s) 24, 59
CviAII CATG 4 cut(s) 499, 578, 672, 917
CviQI GTAC 5 cut(s) 266, 375, 704, 894, 1292
DdeI CTNAG 5 cut(s) 59, 142, 684, 1053, 1209
DrdI GACNNNNNNGTC 1 cut(s) 1056
DseDI GACNNNNNNGTC 1 cut(s) 1056
EaeI YGGCCR 1 cut(s) 889
Eam1104I CTCTTC 2 cut(s) 855, 1179
EarI CTCTTC 2 cut(s) 855, 1179
Eco147I AGGCCT 1 cut(s) 1336
Eco47I GGWCC 3 cut(s) 753, 831, 1049
Eco57I CTGAAG 1 cut(s) 671
Eco72I CACGTG 2 cut(s) 695, 825
Eco88I CYCGRG 3 cut(s) 539, 854, 1063
EcoRII CCWGG 2 cut(s) 225, 886
Esp3I CGTCTC 1 cut(s) 671
FaeI CATG 4 cut(s) 502, 581, 675, 920
FaqI GGGAC 1 cut(s) 1044
FatI CATG 4 cut(s) 498, 577, 671, 916
FauNDI CATATG 1 cut(s) 1308
FbaI TGATCA 2 cut(s) 25, 112
Fnu4HI GCNGC 8 cut(s) 222, 261, 358, 516, 999, 1175, 1206, 1313
FokI GGATG 5 cut(s) 85, 269, 410, 422, 1357
Fsp4HI GCNGC 8 cut(s) 222, 261, 358, 516, 999, 1175, 1206, 1313
FspBI CTAG 1 cut(s) 1289
GluI GCNGC 8 cut(s) 222, 261, 358, 516, 999, 1175, 1206, 1313
GsuI CTGGAG 1 cut(s) 68
HaeIII GGCC 3 cut(s) 891, 925, 1336
HapII CCGG 1 cut(s) 540
HgaI GACGC 1 cut(s) 1046
Hin1II CATG 4 cut(s) 502, 581, 675, 920
HincII GTYRAC 1 cut(s) 1299
HindII GTYRAC 1 cut(s) 1299
HinfI GANTC 4 cut(s) 159, 616, 796, 1303
HpaII CCGG 1 cut(s) 540
HphI GGTGA 6 cut(s) 35, 83, 89, 638, 750, 1345
Hpy166II GTNNAC 6 cut(s) 745, 753, 896, 1145, 1286, 1299
Hpy188I TCNGA 4 cut(s) 19, 615, 1261, 1386
Hpy188III TCNNGA 8 cut(s) 85, 163, 499, 976, 1065, 1244, 1330, 1390
Hpy8I GTNNAC 6 cut(s) 745, 753, 896, 1145, 1286, 1299
Hpy99I CGWCG 1 cut(s) 661
HpyAV CCTTC 3 cut(s) 68, 235, 1274
HpyCH4III ACNGT 8 cut(s) 43, 139, 434, 635, 1082, 1116, 1138, 1296
HpyCH4IV ACGT 4 cut(s) 659, 694, 824, 1072
HpyCH4V TGCA 9 cut(s) 35, 49, 187, 260, 357, 438, 528, 1205, 1312
HpyF10VI GCNNNNNNNGC 4 cut(s) 55, 178, 227, 995
HpyF3I CTNAG 5 cut(s) 59, 142, 684, 1053, 1209
HpySE526I ACGT 4 cut(s) 659, 694, 824, 1072
Hsp92II CATG 4 cut(s) 502, 581, 675, 920
KpnI GGTACC 1 cut(s) 378
Ksp22I TGATCA 2 cut(s) 25, 112
LmnI GCTCC 1 cut(s) 943
Lsp1109I GCAGC 8 cut(s) 208, 272, 369, 502, 985, 1186, 1217, 1324
LweI GCATC 2 cut(s) 247, 652
MaeI CTAG 1 cut(s) 1289
MaeII ACGT 4 cut(s) 659, 694, 824, 1072
MaeIII GTNAC 7 cut(s) 8, 200, 455, 548, 715, 1076, 1087
MflI RGATCY 3 cut(s) 190, 286, 623
MluCI AATT 5 cut(s) 212, 494, 816, 980, 1232
MluI ACGCGT 1 cut(s) 481
MlyI GAGTC 2 cut(s) 168, 1312
MmeI TCCRAC 1 cut(s) 126
MseI TTAA 2 cut(s) 237, 1440
MslI CAYNNNNRTG 4 cut(s) 44, 281, 763, 825
MspA1I CMGCKG 3 cut(s) 263, 515, 1208
MspI CCGG 1 cut(s) 540
MspR9I CCNGG 4 cut(s) 227, 540, 541, 888
MvaI CCWGG 2 cut(s) 227, 888
MvnI CGCG 2 cut(s) 392, 483
MwoI GCNNNNNNNGC 4 cut(s) 55, 178, 227, 995
NciI CCSGG 2 cut(s) 540, 541
NdeI CATATG 1 cut(s) 1308
NlaIII CATG 4 cut(s) 502, 581, 675, 920
NlaIV GGNNCC 5 cut(s) 192, 288, 376, 832, 939
NmuCI GTSAC 1 cut(s) 8
NspI RCATGY 1 cut(s) 675
OliI CACNNNNGTG 3 cut(s) 44, 281, 825
PaeR7I CTCGAG 2 cut(s) 854, 1063
PagI TCATGA 1 cut(s) 498
PceI AGGCCT 1 cut(s) 1336
PciI ACATGT 1 cut(s) 671
PcsI WCGNNNNNNNCGW 1 cut(s) 1382
PfeI GAWTC 2 cut(s) 616, 796
PkrI GCNGC 8 cut(s) 223, 262, 359, 517, 1000, 1176, 1207, 1314
Ple19I CGATCG 1 cut(s) 1329
PleI GAGTC 2 cut(s) 167, 1311
PmaCI CACGTG 2 cut(s) 695, 825
PmlI CACGTG 2 cut(s) 695, 825
PpsI GAGTC 2 cut(s) 167, 1311
Ppu21I YACGTR 3 cut(s) 695, 825, 1073
PscI ACATGT 1 cut(s) 671
Psp6I CCWGG 2 cut(s) 225, 886
PspCI CACGTG 2 cut(s) 695, 825
PspGI CCWGG 2 cut(s) 225, 886
PspN4I GGNNCC 5 cut(s) 192, 288, 376, 832, 939
PspPI GGNCC 3 cut(s) 753, 831, 1049
PspXI VCTCGAGB 1 cut(s) 854
PstNI CAGNNNCTG 1 cut(s) 518
PsuI RGATCY 3 cut(s) 190, 286, 623
PvuI CGATCG 1 cut(s) 1329
PvuII CAGCTG 3 cut(s) 263, 515, 1208
RsaI GTAC 5 cut(s) 267, 376, 705, 895, 1293
RsaNI GTAC 5 cut(s) 266, 375, 704, 894, 1292
RseI CAYNNNNRTG 4 cut(s) 44, 281, 763, 825
SaqAI TTAA 2 cut(s) 237, 1440
SatI GCNGC 8 cut(s) 222, 261, 358, 516, 999, 1175, 1206, 1313
Sau96I GGNCC 3 cut(s) 753, 831, 1049
SchI GAGTC 2 cut(s) 168, 1312
ScrFI CCNGG 4 cut(s) 227, 540, 541, 888
SfaNI GCATC 2 cut(s) 247, 652
Sfr274I CTCGAG 2 cut(s) 854, 1063
SinI GGWCC 3 cut(s) 753, 831, 1049
SlaI CTCGAG 2 cut(s) 854, 1063
SmaI CCCGGG 1 cut(s) 541
SmiMI CAYNNNNRTG 4 cut(s) 44, 281, 763, 825
SmlI CTYRAG 4 cut(s) 854, 974, 1063, 1244
SmoI CTYRAG 4 cut(s) 854, 974, 1063, 1244
SpeI ACTAGT 1 cut(s) 1288
Sse9I AATT 5 cut(s) 212, 494, 816, 980, 1232
SseBI AGGCCT 1 cut(s) 1336
SsiI CCGC 3 cut(s) 230, 392, 1001
SspI AATATT 1 cut(s) 506
SspMI CTAG 1 cut(s) 1289
StuI AGGCCT 1 cut(s) 1336
StyD4I CCNGG 4 cut(s) 225, 538, 539, 886
TaaI ACNGT 8 cut(s) 43, 139, 434, 635, 1082, 1116, 1138, 1296
TaiI ACGT 4 cut(s) 662, 697, 827, 1075
TaqI TCGA 5 cut(s) 568, 609, 855, 1064, 1329
TasI AATT 5 cut(s) 212, 494, 816, 980, 1232
TatI WGTACW 1 cut(s) 1291
TfiI GAWTC 2 cut(s) 616, 796
Tru1I TTAA 2 cut(s) 237, 1440
Tru9I TTAA 2 cut(s) 237, 1440
TseFI GTSAC 1 cut(s) 8
TseI GCWGC 8 cut(s) 221, 260, 357, 515, 998, 1174, 1205, 1312
Tsp45I GTSAC 1 cut(s) 8
TspGWI ACGGA 1 cut(s) 1391
TspMI CCCGGG 1 cut(s) 539
VpaK11BI GGWCC 3 cut(s) 753, 831, 1049
XapI RAATTY 1 cut(s) 494
XceI RCATGY 1 cut(s) 675
XcmI CCANNNNNNNNNTGG 2 cut(s) 368, 1101
XhoI CTCGAG 2 cut(s) 854, 1063
XmaI CCCGGG 1 cut(s) 539
XspI CTAG 1 cut(s) 1289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.