Prupe.1G578800_v2.0.a1

bromo domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000178
Physical Location & Seq
Forward (+)
47091905 .. 47098803
6899 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G578800.1

Sequence Viewer

Length: 1893 bp
ATGAGGCGCAAACAAGCATGCAGGGGAAGGGGAAGGCCACGGAAAAAACCCAATGTGGTCAGTGAGAGAGTGGTGAGTGAGAGAGTGGTGAGTGAGAAGGTGGTCAATGAGAAAGAAGGAGCATTCTTGAATTTTGTGAGTCAAAATATTGAAAGAAATGATATTGGGTGGAATCAATCTGATGACGAAGACCATAACGATGAGGAATTTAACCCAGAAATGGAGATTGATTCAGGCAATTCTTCTGCTTCTTCAATGGGGAGTGGCTGGTCGTACAGGGATCAAAATGTGAGCTCCGTGGATAGGACAGTGCAGAGGTTGATTAAGAAGTATGGTGAAGTGAATCTCCAGATGGAAAACTCATCCAAGAAGATTGATGTTGCACAAACTAAGCCATTGCAAGTCTTTGGTTCTTGGAGTAGATTCCAGCATGAGCTAGAGGCTCCTTCTCATGATCCTCGCTGTAACAAGACAGAATTGAGTGCTTCTTTGTCGGTTATTAAGAGGGTTATGAAAATGGATGCAGCTGTACCTTTCAACATTCCTGTGGATCCAATTGCTCTGAGATTACATGATTACTTTGATGTCATAGATACACCAATGGATTTTGGAACAATTTGCAACCATCTTGAAAATGGTACTAAGTATACGAACTCGGAGGATGTATTCAAGGATGTCCAATACATTTGGAAGAACTGCTGCAACTATTACAATGAGGGTAACTTTGTTTTGGACCTTATGAAAAGGGTGAAGGAGAAGTTCATGACATATTGGACAGCTGCTGGTTTGTGCAGTAAAGAACCAGGGACAAGTAGTGTTTTAACAAGCTCTAACATGGGGAAAAGGAGAACACGAGGGCCCACCCGTAACCTTAAACTAGCCCAAATTCCAATTGGGGAAAGATTTGAAATCAGCTGGAGGAACCGGAGAGCTGTAGGTGAAAGCTCCACGTTTTTCAAAGCAGAGTGTACAGCCCTTGTTAGGCAAACCCAGGACCTACCCCTTCAGGTCAAGTCATGGAAGGAAATCCCATTTGATATTAAAAAGAAGGCATTTGAACATATGTTGAAGCGTTTCAAAGTCGAAGATCACATGACATGGGTATTGGATCAGATTCATAGATCCTACCACAATTATCGGCATCACCTCAAGAAGATGTGGTATGAAACGTGTGAGACAACTGAGGAAGCACGGAAAAAAGTACCACCAAATGTTGCGGACGATGATTGGCAGTATCTTATAAACCTGTGGAGCTCACCTGAATGGCAGTCAATGAGTATGAAAAACAAGGAGAATGGTTCCAAAAATAACATAATCCACACATCTGGCTCCAAGAGTTTCTCGCAAATCCGCGAGGAAGAGAGAAAGAAAACTGGAAATGACCCTGGACGTACCCTCCTATGGGAACTCACCCATGTGCGGCCTGATGGACTAGCTGCAAATCCAGCTTCACAGGAGGCATTGTCAAAGCTCAAGAAACTTTATACTCAAATATCTGCGGAGAACTCACAGATGACTGAAGATGAGATTTTTGTAAAGGTTTTTGGACCTGAGCGTTCGAGTCGGGTGCGTGGTTACGGGGATGGTGTAACCCCCAAAGAGTTATGGGGCCCATCATCGTCATCATCATCTACTGTTAATGAACTCAGAAGGCAACTTGAGGAATCAAAGCAGCGACAAGAGGAGTCTGAACAAAGAAGTGCTGCTGAGGTACAGGGCTTGAAAGAGCAACTTGGTCGGGTTGAGGGTTTGCTATCAGCTCAAATGAATCGCTTTGAAGGTTTACTATTACAGTTGACGAGTCATATGCACTCCCCGCCCCAGATTGAGAGGCGTACTGAAATTTCACCCTCCCGAAATGGCCGCCCACGAACGACCCGACCTAGAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bromodomain Transposase_24

Protein Analysis

631

Amino Acids

72.71

Weight (kDa)

9.08

Isoelectric Point (pI)

52.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000178)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G40087 AT3G30200
fragaria_vesca FvH4_1g23271 FvH4_3g22812 FvH4_3g22813 FvH4_3g31042 FvH4_3g31043 FvH4_7g03653
malus_domestica MD05G1321200.v1.1 MD09G1027200.v1.1 MD15G1434900.v1.1 MD15G1435000.v1.1 MD15G1435100.v1.1
prunus_persica Prupe.1G578800_v2.0.a1 Prupe.1G578800_v2.0.a1 Prupe.1G578800_v2.0.a1 Prupe.2G062700_v2.0.a1 Prupe.5G033400_v2.0.a1 Prupe.7G022900_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1
pyrus_communis pycom03g07600 pycom03g11360 pycom05g02870 pycom111g02130 pycom15g38370 pycom15g38380
rosa_chinensis RchiOBHm_Chr1g0346371 RchiOBHm_Chr4g0402051 RchiOBHm_Chr4g0414991 RchiOBHm_Chr5g0051011 RchiOBHm_Chr5g0051181 RchiOBHm_Chr6g0273071 RchiOBHm_Chr7g0218301 RchiOBHm_Chr7g0241081
rosa_laevigata RLG00000007709 RLG00000008953 RLG00000012400 RLG00000012401 RLG00000013805 RLG00000014199 RLG00000014726 RLG00000017792 RLG00000017793 RLG00000018860 RLG00000020749 RLG00000030708 RLG00000033507
rosa_multiflora Rmu_co8373761.1_g000001 Rmu_sc0000028.1_g000023 Rmu_sc0000235.1_g000040 Rmu_sc0000293.1_g000017 Rmu_sc0000293.1_g000019 Rmu_sc0000651.1_g000012 Rmu_sc0000870.1_g000051 Rmu_sc0001167.1_g000031 Rmu_sc0001373.1_g000039 Rmu_sc0001861.1_g000055 Rmu_sc0001891.1_g000038 Rmu_sc0001909.1_g000015 Rmu_sc0002500.1_g000002 Rmu_sc0002868.1_g000036 Rmu_sc0002868.1_g000038 Rmu_sc0002868.1_g000039 Rmu_sc0003379.1_g000001 Rmu_sc0003778.1_g000005 Rmu_sc0003778.1_g000006 Rmu_sc0010475.1_g000011 Rmu_sc0015271.1_g000002 Rmu_sc0015271.1_g000003 Rmu_sc0017962.1_g000001 Rmu_sc0017962.1_g000003 Rmu_sc0022129.1_g000004 Rmu_sc0025694.1_g000003 Rmu_sc0025694.1_g000004
rosa_roxburghii Rroxscaffold_1G00031640 Rroxscaffold_1G00047620 Rroxscaffold_1G00047630 Rroxscaffold_1G00050560 Rroxscaffold_1G00050570 Rroxscaffold_1G00054800 Rroxscaffold_1G00055890 Rroxscaffold_2G00108230 Rroxscaffold_3G00240860 Rroxscaffold_4G00299670 Rroxscaffold_4G00299680 Rroxscaffold_4G00299690 Rroxscaffold_4G00306320 Rroxscaffold_4G00306340 Rroxscaffold_5G00341060 Rroxscaffold_5G00342000 Rroxscaffold_5G00355660 Rroxscaffold_5G00357170 Rroxscaffold_6G00399490 Rroxscaffold_6G00408400 Rroxscaffold_7G00189260 Rroxscaffold_7G00199620 Rroxscaffold_7G00215470
rosa_rugosa Rorug02G0117600 Rorug02G0117700 Rorug04G0116400 Rorug06G0103200
rosa_samantha Rh1AG062800 Rh1AG073700 Rh1CG091700 Rh1DG077600 Rh1DG077700 Rh1DG077800 Rh1DG117400 Rh1DG146300 Rh2BG193300 Rh2BG193400 Rh2BG265300 Rh2BG413400 Rh3CG365500 Rh4AG315400 Rh4BG323100 Rh4BG323200 Rh4CG071400 Rh4CG142500 Rh4CG203300 Rh4CG338300 Rh4DG079300 Rh4DG079400 Rh4DG217000 Rh4DG217100 Rh4DG217200 Rh4DG217300 Rh5AG128300 Rh5AG239900 Rh5AG465900 Rh5BG348600 Rh5BG387900 Rh5BG388000 Rh5CG181800 Rh5CG181900 Rh5CG271000 Rh5CG271100 Rh5DG127100 Rh5DG138400 Rh5DG168200 Rh5DG168300 Rh5DG361500 Rh5DG460400 Rh6AG045400 Rh6AG058600 Rh6BG275000 Rh6CG089700 Rh6DG182300 Rh6DG182400 Rh6DG207300 Rh6DG207400 Rh7BG374000 Rh7BG390600 Rh7BG390700 Rh7BG390800
rosa_wichuraiana Rw0G018690 Rw1G007320 Rw4G008510 Rw5G011510 Rw5G021830 Rw6G024150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1241
AccI GTMKAC 1 cut(s) 647
AccII CGCG 1 cut(s) 1353
AciI CCGC 6 cut(s) 1217, 1351, 1420, 1499, 1817, 1864
AclWI GGATC 6 cut(s) 288, 449, 545, 558, 1116, 1116
AcoI YGGCCR 1 cut(s) 1861
AcsI RAATTY 4 cut(s) 130, 206, 885, 1842
AcuI CTGAAG 2 cut(s) 989, 1539
AfaI GTAC 8 cut(s) 275, 531, 640, 970, 1203, 1393, 1713, 1837
AfiI CCNNNNNNNGG 6 cut(s) 220, 303, 981, 1401, 1402, 1419
AflIII ACRYGT 1 cut(s) 1169
AjnI CCWGG 3 cut(s) 802, 990, 1384
AleI CACNNNNGTG 1 cut(s) 1415
Alw21I GWGCWC 2 cut(s) 296, 1256
Alw26I GTCTC 1 cut(s) 1169
AlwI GGATC 6 cut(s) 288, 449, 545, 558, 1116, 1116
AlwNI CAGNNNCTG 1 cut(s) 782
AoxI GGCC 5 cut(s) 35, 857, 1421, 1609, 1861
ApaI GGGCCC 2 cut(s) 861, 1613
ApeKI GCWGC 6 cut(s) 524, 699, 779, 1436, 1672, 1703
ApoI RAATTY 4 cut(s) 130, 206, 885, 1842
Asp700I GAANNNNTTC 1 cut(s) 1073
AspLEI GCGC 1 cut(s) 9
AspS9I GGNCC 7 cut(s) 733, 857, 858, 994, 1547, 1609, 1610
AsuHPI GGTGA 9 cut(s) 85, 100, 347, 760, 950, 1136, 1248, 1402, 1839
AvaII GGWCC 3 cut(s) 733, 994, 1547
BaeGI GKGCMC 2 cut(s) 861, 1613
BamHI GGATCC 1 cut(s) 550
BanII GRGCYC 4 cut(s) 296, 861, 1256, 1613
BauI CACGAG 1 cut(s) 852
BbsI GAAGAC 1 cut(s) 195
Bbv12I GWGCWC 2 cut(s) 296, 1256
BbvCI CCTCAGC 1 cut(s) 1707
BbvI GCAGC 6 cut(s) 536, 686, 766, 1423, 1684, 1690
BccI CCATC 5 cut(s) 346, 633, 1421, 1577, 1621
BcgI CGANNNNNNTGC 6 cut(s) 1549, 1583, 1718, 1752, 1789, 1823
BciT130I CCWGG 3 cut(s) 804, 992, 1386
BcoDI GTCTC 1 cut(s) 1169
BfaI CTAG 4 cut(s) 437, 878, 1433, 1884
BfmI CTRYAG 1 cut(s) 933
BisI GCNGC 8 cut(s) 525, 700, 780, 1421, 1437, 1673, 1704, 1864
BlsI GCNGC 8 cut(s) 526, 701, 781, 1422, 1438, 1674, 1705, 1865
Bme1390I CCNGG 3 cut(s) 804, 992, 1386
Bme18I GGWCC 3 cut(s) 733, 994, 1547
BmgT120I GGNCC 7 cut(s) 733, 857, 858, 994, 1547, 1609, 1610
BmiI GGNNCC 8 cut(s) 444, 552, 859, 923, 1300, 1330, 1610, 1611
BmrFI CCNGG 3 cut(s) 804, 992, 1386
BmsI GCATC 2 cut(s) 511, 1150
BpiI GAAGAC 1 cut(s) 195
BpmI CTGGAG 2 cut(s) 332, 937
Bpu10I CCTNAGC 2 cut(s) 1551, 1707
BpuEI CTTGAG 3 cut(s) 1133, 1457, 1679
BsaJI CCNNGG 5 cut(s) 38, 297, 803, 990, 1384
BsaWI WCCGGW 1 cut(s) 924
BsaXI ACNNNNNCTCC 4 cut(s) 1380, 1410, 1448, 1478
Bsc4I CCNNNNNNNGG 6 cut(s) 220, 303, 981, 1401, 1402, 1419
Bse1I ACTGG 1 cut(s) 1378
Bse3DI GCAATG 1 cut(s) 395
BseBI CCWGG 3 cut(s) 804, 992, 1386
BseDI CCNNGG 5 cut(s) 38, 297, 803, 990, 1384
BseGI GGATG 5 cut(s) 362, 526, 667, 679, 1588
BseLI CCNNNNNNNGG 6 cut(s) 220, 303, 981, 1401, 1402, 1419
BseMI GCAATG 1 cut(s) 395
BseMII CTCAG 5 cut(s) 554, 1173, 1542, 1660, 1698
BseNI ACTGG 1 cut(s) 1378
BseRI GAGGAG 1 cut(s) 1697
BseSI GKGCMC 2 cut(s) 861, 1613
BseXI GCAGC 6 cut(s) 536, 686, 766, 1423, 1684, 1690
BsgI GTGCAG 2 cut(s) 332, 811
Bsh1236I CGCG 1 cut(s) 1353
BshFI GGCC 5 cut(s) 37, 859, 1423, 1611, 1863
BsiHKAI GWGCWC 2 cut(s) 296, 1256
BsiSI CCGG 1 cut(s) 925
BslFI GGGAC 1 cut(s) 820
BslI CCNNNNNNNGG 6 cut(s) 220, 303, 981, 1401, 1402, 1419
BsmAI GTCTC 1 cut(s) 1169
BsmFI GGGAC 1 cut(s) 820
BsmI GAATGC 1 cut(s) 122
BsnI GGCC 5 cut(s) 37, 859, 1423, 1611, 1863
Bsp120I GGGCCC 2 cut(s) 857, 1609
Bsp1286I GDGCHC 4 cut(s) 296, 861, 1256, 1613
Bsp1407I TGTACA 1 cut(s) 968
Bsp143I GATC 6 cut(s) 280, 454, 550, 1087, 1108, 1121
BspACI CCGC 6 cut(s) 1217, 1351, 1420, 1499, 1817, 1864
BspANI GGCC 5 cut(s) 37, 859, 1423, 1611, 1863
BspCNI CTCAG 5 cut(s) 555, 1174, 1543, 1659, 1699
BspFNI CGCG 1 cut(s) 1353
BspHI TCATGA 2 cut(s) 451, 762
BspLI GGNNCC 8 cut(s) 444, 552, 859, 923, 1300, 1330, 1610, 1611
BspPI GGATC 6 cut(s) 288, 449, 545, 558, 1116, 1116
BsrDI GCAATG 1 cut(s) 395
BsrGI TGTACA 1 cut(s) 968
BsrI ACTGG 1 cut(s) 1378
BssECI CCNNGG 5 cut(s) 38, 297, 803, 990, 1384
BssMI GATC 6 cut(s) 280, 454, 550, 1087, 1108, 1121
BssNAI GTATAC 1 cut(s) 648
BssSI CACGAG 1 cut(s) 852
Bst1107I GTATAC 1 cut(s) 648
Bst2BI CACGAG 1 cut(s) 852
Bst2UI CCWGG 3 cut(s) 804, 992, 1386
Bst4CI ACNGT 3 cut(s) 310, 1636, 1794
Bst6I CTCTTC 1 cut(s) 1353
BstAUI TGTACA 1 cut(s) 968
BstC8I GCNNGC 1 cut(s) 19
BstDEI CTNAG 7 cut(s) 390, 563, 642, 1182, 1551, 1646, 1707
BstDSI CCRYGG 2 cut(s) 38, 297
BstF5I GGATG 5 cut(s) 362, 526, 667, 679, 1588
BstFNI CGCG 1 cut(s) 1353
BstHHI GCGC 1 cut(s) 9
BstKTI GATC 6 cut(s) 283, 457, 553, 1090, 1111, 1124
BstMAI GTCTC 1 cut(s) 1169
BstMBI GATC 6 cut(s) 280, 454, 550, 1087, 1108, 1121
BstMWI GCNNNNNNNGC 2 cut(s) 1445, 1816
BstNI CCWGG 3 cut(s) 804, 992, 1386
BstNSI RCATGY 1 cut(s) 21
BstSCI CCNGG 3 cut(s) 802, 990, 1384
BstSFI CTRYAG 1 cut(s) 933
BstSLI GKGCMC 2 cut(s) 861, 1613
BstUI CGCG 1 cut(s) 1353
BstV1I GCAGC 6 cut(s) 536, 686, 766, 1423, 1684, 1690
BstV2I GAAGAC 1 cut(s) 195
BstX2I RGATCY 2 cut(s) 550, 1121
BstXI CCANNNNNNTGG 1 cut(s) 1325
BstYI RGATCY 2 cut(s) 550, 1121
BstZ17I GTATAC 1 cut(s) 648
BsuRI GGCC 5 cut(s) 37, 859, 1423, 1611, 1863
BtgI CCRYGG 2 cut(s) 38, 297
BtsCI GGATG 5 cut(s) 362, 526, 667, 679, 1588
BtsIMutI CAGTG 2 cut(s) 67, 315
Cac8I GCNNGC 1 cut(s) 19
CaiI CAGNNNCTG 1 cut(s) 782
CciI TCATGA 2 cut(s) 451, 762
CfoI GCGC 1 cut(s) 9
Cfr13I GGNCC 7 cut(s) 733, 857, 858, 994, 1547, 1609, 1610
Csp6I GTAC 8 cut(s) 274, 530, 639, 969, 1202, 1392, 1712, 1836
CviQI GTAC 8 cut(s) 274, 530, 639, 969, 1202, 1392, 1712, 1836
DdeI CTNAG 7 cut(s) 390, 563, 642, 1182, 1551, 1646, 1707
DpnI GATC 6 cut(s) 282, 456, 552, 1089, 1110, 1123
DpnII GATC 6 cut(s) 280, 454, 550, 1087, 1108, 1121
EaeI YGGCCR 1 cut(s) 1861
Eam1104I CTCTTC 1 cut(s) 1353
EarI CTCTTC 1 cut(s) 1353
Ecl136II GAGCTC 2 cut(s) 294, 1254
Eco24I GRGCYC 4 cut(s) 296, 861, 1256, 1613
Eco47I GGWCC 3 cut(s) 733, 994, 1547
Eco53kI GAGCTC 2 cut(s) 294, 1254
Eco57I CTGAAG 2 cut(s) 989, 1539
EcoICRI GAGCTC 2 cut(s) 294, 1254
EcoO109I RGGNCCY 3 cut(s) 857, 994, 1609
EcoRII CCWGG 3 cut(s) 802, 990, 1384
EcoT38I GRGCYC 4 cut(s) 296, 861, 1256, 1613
FalI AAGNNNNNCTT 2 cut(s) 1716, 1748
FaqI GGGAC 1 cut(s) 820
FauI CCCGC 1 cut(s) 1824
FauNDI CATATG 2 cut(s) 1062, 1806
FblI GTMKAC 1 cut(s) 647
Fnu4HI GCNGC 8 cut(s) 525, 700, 780, 1421, 1437, 1673, 1704, 1864
FokI GGATG 5 cut(s) 349, 533, 674, 686, 1595
FriOI GRGCYC 4 cut(s) 296, 861, 1256, 1613
Fsp4HI GCNGC 8 cut(s) 525, 700, 780, 1421, 1437, 1673, 1704, 1864
FspBI CTAG 4 cut(s) 437, 878, 1433, 1884
GlaI GCGC 1 cut(s) 8
GluI GCNGC 8 cut(s) 525, 700, 780, 1421, 1437, 1673, 1704, 1864
GsuI CTGGAG 2 cut(s) 332, 937
HaeIII GGCC 5 cut(s) 37, 859, 1423, 1611, 1863
HapII CCGG 1 cut(s) 925
HhaI GCGC 1 cut(s) 9
Hin6I GCGC 1 cut(s) 7
HinP1I GCGC 1 cut(s) 7
HincII GTYRAC 1 cut(s) 1797
HindII GTYRAC 1 cut(s) 1797
HpaII CCGG 1 cut(s) 925
HphI GGTGA 9 cut(s) 85, 100, 347, 760, 950, 1136, 1248, 1402, 1839
Hpy166II GTNNAC 4 cut(s) 648, 969, 1784, 1797
Hpy188I TCNGA 6 cut(s) 181, 564, 658, 1113, 1649, 1690
Hpy188III TCNNGA 8 cut(s) 127, 349, 452, 629, 763, 1150, 1474, 1854
Hpy8I GTNNAC 4 cut(s) 648, 969, 1784, 1797
HpyCH4III ACNGT 3 cut(s) 310, 1636, 1794
HpyCH4IV ACGT 3 cut(s) 950, 1169, 1390
HpyF10VI GCNNNNNNNGC 2 cut(s) 1445, 1816
HpyF3I CTNAG 7 cut(s) 390, 563, 642, 1182, 1551, 1646, 1707
HpySE526I ACGT 3 cut(s) 950, 1169, 1390
HspAI GCGC 1 cut(s) 7
Kzo9I GATC 6 cut(s) 280, 454, 550, 1087, 1108, 1121
LmnI GCTCC 6 cut(s) 119, 299, 448, 950, 1251, 1334
Lsp1109I GCAGC 6 cut(s) 536, 686, 766, 1423, 1684, 1690
LweI GCATC 2 cut(s) 511, 1150
MaeI CTAG 4 cut(s) 437, 878, 1433, 1884
MaeII ACGT 3 cut(s) 950, 1169, 1390
MaeIII GTNAC 5 cut(s) 464, 719, 866, 1574, 1588
MalI GATC 6 cut(s) 282, 456, 552, 1089, 1110, 1123
MboI GATC 6 cut(s) 280, 454, 550, 1087, 1108, 1121
MboII GAAGA 9 cut(s) 200, 234, 243, 382, 703, 1097, 1165, 1370, 1532
MfeI CAATTG 2 cut(s) 555, 891
MflI RGATCY 2 cut(s) 550, 1121
MhlI GDGCHC 4 cut(s) 296, 861, 1256, 1613
MlyI GAGTC 4 cut(s) 148, 1570, 1694, 1810
MroXI GAANNNNTTC 1 cut(s) 1073
MseI TTAA 7 cut(s) 210, 324, 501, 821, 873, 1041, 1638
MslI CAYNNNNRTG 4 cut(s) 198, 545, 1261, 1415
MspA1I CMGCKG 3 cut(s) 527, 779, 915
MspI CCGG 1 cut(s) 925
MspR9I CCNGG 3 cut(s) 804, 992, 1386
MunI CAATTG 2 cut(s) 555, 891
Mva1269I GAATGC 1 cut(s) 122
MvaI CCWGG 3 cut(s) 804, 992, 1386
MvnI CGCG 1 cut(s) 1353
MwoI GCNNNNNNNGC 2 cut(s) 1445, 1816
NdeI CATATG 2 cut(s) 1062, 1806
NdeII GATC 6 cut(s) 280, 454, 550, 1087, 1108, 1121
NlaIV GGNNCC 8 cut(s) 444, 552, 859, 923, 1300, 1330, 1610, 1611
NspI RCATGY 1 cut(s) 21
OliI CACNNNNGTG 1 cut(s) 1415
PaeI GCATGC 1 cut(s) 21
PagI TCATGA 2 cut(s) 451, 762
PcsI WCGNNNNNNNCGW 1 cut(s) 1876
PctI GAATGC 1 cut(s) 122
PdmI GAANNNNTTC 1 cut(s) 1073
PfeI GAWTC 7 cut(s) 172, 230, 343, 423, 1114, 1664, 1768
PkrI GCNGC 8 cut(s) 526, 701, 781, 1422, 1438, 1674, 1705, 1865
PleI GAGTC 4 cut(s) 147, 1569, 1693, 1809
PpsI GAGTC 4 cut(s) 147, 1569, 1693, 1809
PpuMI RGGWCCY 1 cut(s) 994
PsiI TTATAA 1 cut(s) 1241
Psp124BI GAGCTC 2 cut(s) 296, 1256
Psp5II RGGWCCY 1 cut(s) 994
Psp6I CCWGG 3 cut(s) 802, 990, 1384
PspGI CCWGG 3 cut(s) 802, 990, 1384
PspN4I GGNNCC 8 cut(s) 444, 552, 859, 923, 1300, 1330, 1610, 1611
PspOMI GGGCCC 2 cut(s) 857, 1609
PspPI GGNCC 7 cut(s) 733, 857, 858, 994, 1547, 1609, 1610
PspPPI RGGWCCY 1 cut(s) 994
PstNI CAGNNNCTG 1 cut(s) 782
PsuI RGATCY 2 cut(s) 550, 1121
PvuII CAGCTG 3 cut(s) 527, 779, 915
RsaI GTAC 8 cut(s) 275, 531, 640, 970, 1203, 1393, 1713, 1837
RsaNI GTAC 8 cut(s) 274, 530, 639, 969, 1202, 1392, 1712, 1836
RseI CAYNNNNRTG 4 cut(s) 198, 545, 1261, 1415
SacI GAGCTC 2 cut(s) 296, 1256
SaqAI TTAA 7 cut(s) 210, 324, 501, 821, 873, 1041, 1638
SatI GCNGC 8 cut(s) 525, 700, 780, 1421, 1437, 1673, 1704, 1864
Sau3AI GATC 6 cut(s) 280, 454, 550, 1087, 1108, 1121
Sau96I GGNCC 7 cut(s) 733, 857, 858, 994, 1547, 1609, 1610
SchI GAGTC 4 cut(s) 148, 1570, 1694, 1810
ScrFI CCNGG 3 cut(s) 804, 992, 1386
SduI GDGCHC 4 cut(s) 296, 861, 1256, 1613
SfaNI GCATC 2 cut(s) 511, 1150
SfcI CTRYAG 1 cut(s) 933
SinI GGWCC 3 cut(s) 733, 994, 1547
SmiMI CAYNNNNRTG 4 cut(s) 198, 545, 1261, 1415
SmlI CTYRAG 3 cut(s) 1148, 1472, 1658
SmoI CTYRAG 3 cut(s) 1148, 1472, 1658
SphI GCATGC 1 cut(s) 21
SsiI CCGC 6 cut(s) 1217, 1351, 1420, 1499, 1817, 1864
SspI AATATT 1 cut(s) 148
SspMI CTAG 4 cut(s) 437, 878, 1433, 1884
SstI GAGCTC 2 cut(s) 296, 1256
StyD4I CCNGG 3 cut(s) 802, 990, 1384
TaaI ACNGT 3 cut(s) 310, 1636, 1794
TaiI ACGT 3 cut(s) 953, 1172, 1393
TaqI TCGA 2 cut(s) 1083, 1559
TatI WGTACW 1 cut(s) 968
TauI GCSGC 2 cut(s) 1423, 1866
TfiI GAWTC 7 cut(s) 172, 230, 343, 423, 1114, 1664, 1768
Tru1I TTAA 7 cut(s) 210, 324, 501, 821, 873, 1041, 1638
Tru9I TTAA 7 cut(s) 210, 324, 501, 821, 873, 1041, 1638
TscAI CASTG 2 cut(s) 67, 315
TseI GCWGC 6 cut(s) 524, 699, 779, 1436, 1672, 1703
TspDTI ATGAA 8 cut(s) 527, 751, 755, 1106, 1179, 1295, 1656, 1781
TspGWI ACGGA 3 cut(s) 55, 286, 1207
TspRI CASTG 2 cut(s) 67, 315
VpaK11BI GGWCC 3 cut(s) 733, 994, 1547
XapI RAATTY 4 cut(s) 130, 206, 885, 1842
XceI RCATGY 1 cut(s) 21
XcmI CCANNNNNNNNNTGG 2 cut(s) 632, 890
XmiI GTMKAC 1 cut(s) 647
XmnI GAANNNNTTC 1 cut(s) 1073
XspI CTAG 4 cut(s) 437, 878, 1433, 1884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.