Rroxscaffold_6G00399490

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000178
Physical Location & Seq
Forward (+)
21392855 .. 21395680
2826 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00399490.1

Sequence Viewer

Length: 1431 bp
ATGGCCAAGAGATCACAAGGTCCTAAATTTTTGCATCAATTGCGAACATCAGCACTTCCACCAAACCACTTGCGAGCATCTGCTGAAAAGGTTTCTAGGATTGTAAAGCCTTTGGATAAACCTACAACACCTGCATGTCCATTGCAATCTTCAACTGAAAAGGTTTCTAAGGTTATAAAGCCTTTAGTTAAACCTACAACACTTTCAAGCCCATTGCGGTTATCTCCTAGAAAGCATTCAAAGACACAGCCTTCCACAAATCGATCAACACATCCTCATCGACCTGCTATGCAGTCATCAAGGACTCCATCTCCTCCTTCTTCTCCACATGTTATGAGATCGTCTCCACTTTCCCATTCACCTCCACATATGCGCAGAGTCTTATCAACCTCTAATCAGCACGCATCAACTCCAAGTGCGCATGAAGAGATAGCTGAATCTTCTCAAGTTGCTCATCCTCCTACCTTAGAAGAGAACATTGGTGCCCGGAAGAAACGACGTGGTGAGACTCGTGGTCTTGGGACAGCCAAGAAGAAATGTTGTAGTAATCAAATAGAGATTGATATTCCAGAGCATGTAAAACGAGCCGTAGGAGCGAATTGCAAGTCTTACATCACAGAGATAGGCTGCATTGTTAGGCAAAATGCTCCATTACAAGTTAAGCATTGGAGTGGAATTAGCAAGGATGATGTTGCTTCGATGGTTCGTCTTGTCCGTGAGAAATTCAAATTGGGGGATGAACCACACGTGAATGAGGCTATTGAGGCAGACATGAAAAGAAGATATAGCACTTGGCGATACAATTTGCATAAGACATTTTTGCAATATGAATCAGTGGAGGAGGCACTTGAGAATAGACCTGAAAATGTGGGAGAAGATGACTGGAATTTTCTCAGCAATTGGTGGCACGATGACGAGTGGCTGGAATTGAGCGGAAAAAATAAGAAAAATAGAGATAAGTTAACAATAACTCATTGTGCTGGGACAAAAGCATTCGGTCGCATTAGATATGAAAATGGTGAGATGACAAAATTGAAAAATCCTGAGCAAACAAATGAAGAGTCAGAAAAAGCAATGTCTGATGATGAGATATATGATAAAGTTATTTCCACAATTGTTGGTCCACCTCCGTTAGGCTACATACGTGGTTTAGGAGCAGGTCCTAAGCCTAAAAATTCAAAGGTCTCCAATAATCATTCACAACTTCAGGAGGCTACACGGAGGGCAGATGAGGCAGAGAGAAGATCTACCCAACTTGCAGAGGAGTTGGAGGCAATGAAGGCTAGTGCAGCTCAACAAAATGAAGAATTAGAGGTAGTGAAGGCTAGTGCAGCTCAACAAAATGAACAGTTAGAAGCAGTTAAAGCAAAGCAGAATGAGACGGACGCTCTTTTGAAAAAATTGCTGGAACAATTTTCCTCTAGGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

476

Amino Acids

53.46

Weight (kDa)

9.47

Isoelectric Point (pI)

53.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 292 - 343 8.7e-06 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000178)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G40087 AT3G30200
fragaria_vesca FvH4_1g23271 FvH4_3g22812 FvH4_3g22813 FvH4_3g31042 FvH4_3g31043 FvH4_7g03653
malus_domestica MD05G1321200.v1.1 MD09G1027200.v1.1 MD15G1434900.v1.1 MD15G1435000.v1.1 MD15G1435100.v1.1
prunus_persica Prupe.1G578800_v2.0.a1 Prupe.1G578800_v2.0.a1 Prupe.1G578800_v2.0.a1 Prupe.2G062700_v2.0.a1 Prupe.5G033400_v2.0.a1 Prupe.7G022900_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1
pyrus_communis pycom03g07600 pycom03g11360 pycom05g02870 pycom111g02130 pycom15g38370 pycom15g38380
rosa_chinensis RchiOBHm_Chr1g0346371 RchiOBHm_Chr4g0402051 RchiOBHm_Chr4g0414991 RchiOBHm_Chr5g0051011 RchiOBHm_Chr5g0051181 RchiOBHm_Chr6g0273071 RchiOBHm_Chr7g0218301 RchiOBHm_Chr7g0241081
rosa_laevigata RLG00000007709 RLG00000008953 RLG00000012400 RLG00000012401 RLG00000013805 RLG00000014199 RLG00000014726 RLG00000017792 RLG00000017793 RLG00000018860 RLG00000020749 RLG00000030708 RLG00000033507
rosa_multiflora Rmu_co8373761.1_g000001 Rmu_sc0000028.1_g000023 Rmu_sc0000235.1_g000040 Rmu_sc0000293.1_g000017 Rmu_sc0000293.1_g000019 Rmu_sc0000651.1_g000012 Rmu_sc0000870.1_g000051 Rmu_sc0001167.1_g000031 Rmu_sc0001373.1_g000039 Rmu_sc0001861.1_g000055 Rmu_sc0001891.1_g000038 Rmu_sc0001909.1_g000015 Rmu_sc0002500.1_g000002 Rmu_sc0002868.1_g000036 Rmu_sc0002868.1_g000038 Rmu_sc0002868.1_g000039 Rmu_sc0003379.1_g000001 Rmu_sc0003778.1_g000005 Rmu_sc0003778.1_g000006 Rmu_sc0010475.1_g000011 Rmu_sc0015271.1_g000002 Rmu_sc0015271.1_g000003 Rmu_sc0017962.1_g000001 Rmu_sc0017962.1_g000003 Rmu_sc0022129.1_g000004 Rmu_sc0025694.1_g000003 Rmu_sc0025694.1_g000004
rosa_roxburghii Rroxscaffold_1G00031640 Rroxscaffold_1G00047620 Rroxscaffold_1G00047630 Rroxscaffold_1G00050560 Rroxscaffold_1G00050570 Rroxscaffold_1G00054800 Rroxscaffold_1G00055890 Rroxscaffold_2G00108230 Rroxscaffold_3G00240860 Rroxscaffold_4G00299670 Rroxscaffold_4G00299680 Rroxscaffold_4G00299690 Rroxscaffold_4G00306320 Rroxscaffold_4G00306340 Rroxscaffold_5G00341060 Rroxscaffold_5G00342000 Rroxscaffold_5G00355660 Rroxscaffold_5G00357170 Rroxscaffold_6G00399490 Rroxscaffold_6G00408400 Rroxscaffold_7G00189260 Rroxscaffold_7G00199620 Rroxscaffold_7G00215470
rosa_rugosa Rorug02G0117600 Rorug02G0117700 Rorug04G0116400 Rorug06G0103200
rosa_samantha Rh1AG062800 Rh1AG073700 Rh1CG091700 Rh1DG077600 Rh1DG077700 Rh1DG077800 Rh1DG117400 Rh1DG146300 Rh2BG193300 Rh2BG193400 Rh2BG265300 Rh2BG413400 Rh3CG365500 Rh4AG315400 Rh4BG323100 Rh4BG323200 Rh4CG071400 Rh4CG142500 Rh4CG203300 Rh4CG338300 Rh4DG079300 Rh4DG079400 Rh4DG217000 Rh4DG217100 Rh4DG217200 Rh4DG217300 Rh5AG128300 Rh5AG239900 Rh5AG465900 Rh5BG348600 Rh5BG387900 Rh5BG388000 Rh5CG181800 Rh5CG181900 Rh5CG271000 Rh5CG271100 Rh5DG127100 Rh5DG138400 Rh5DG168200 Rh5DG168300 Rh5DG361500 Rh5DG460400 Rh6AG045400 Rh6AG058600 Rh6BG275000 Rh6CG089700 Rh6DG182300 Rh6DG182400 Rh6DG207300 Rh6DG207400 Rh7BG374000 Rh7BG390600 Rh7BG390700 Rh7BG390800
rosa_wichuraiana Rw0G018690 Rw1G007320 Rw4G008510 Rw5G011510 Rw5G021830 Rw6G024150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 176
AarI CACCTGC 1 cut(s) 139
Acc16I TGCGCA 2 cut(s) 374, 420
Acc36I ACCTGC 3 cut(s) 139, 292, 1148
AccB1I GGYRCC 1 cut(s) 482
AccBSI CCGCTC 1 cut(s) 933
AciI CCGC 2 cut(s) 217, 933
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 4 cut(s) 26, 722, 886, 1174
AcuI CTGAAG 1 cut(s) 1190
AcvI CACGTG 1 cut(s) 748
AfiI CCNNNNNNNGG 1 cut(s) 1133
AflIII ACRYGT 2 cut(s) 328, 745
AgsI TTSAA 7 cut(s) 153, 207, 240, 727, 1036, 1179, 1396
AhdI GACNNNNNGTC 1 cut(s) 513
AjiI CACGTC 1 cut(s) 500
AjuI GAANNNNNNNTTGG 4 cut(s) 462, 494, 713, 745
AluBI AGCT 3 cut(s) 434, 1292, 1334
AluI AGCT 3 cut(s) 434, 1292, 1334
Alw26I GTCTC 4 cut(s) 348, 500, 1189, 1373
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 3 cut(s) 627, 1289, 1331
ApoI RAATTY 4 cut(s) 26, 722, 886, 1174
ArsI GACNNNNNNTTYG 4 cut(s) 590, 622, 1046, 1078
Asp700I GAANNNNTTC 1 cut(s) 235
AspLEI GCGC 2 cut(s) 375, 421
AspS9I GGNCC 3 cut(s) 20, 1121, 1160
AsuC2I CCSGG 1 cut(s) 487
AsuHPI GGTGA 3 cut(s) 351, 515, 1031
AvaII GGWCC 3 cut(s) 20, 1121, 1160
BaeGI GKGCMC 1 cut(s) 487
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 482
BauI CACGAG 1 cut(s) 510
BbrPI CACGTG 1 cut(s) 748
BbvI GCAGC 3 cut(s) 614, 1301, 1343
BccI CCATC 2 cut(s) 316, 694
BceAI ACGGC 1 cut(s) 572
BcnI CCSGG 1 cut(s) 487
BcoDI GTCTC 4 cut(s) 348, 500, 1189, 1373
BfaI CTAG 5 cut(s) 96, 228, 1284, 1326, 1422
BfuAI ACCTGC 3 cut(s) 139, 292, 1148
BglII AGATCT 1 cut(s) 1244
BisI GCNGC 3 cut(s) 628, 1290, 1332
BlsI GCNGC 3 cut(s) 629, 1291, 1333
Bme1390I CCNGG 1 cut(s) 487
Bme18I GGWCC 3 cut(s) 20, 1121, 1160
BmeRI GACNNNNNGTC 1 cut(s) 513
BmgBI CACGTC 1 cut(s) 500
BmgT120I GGNCC 3 cut(s) 20, 1121, 1160
BmiI GGNNCC 1 cut(s) 484
BmrFI CCNGG 1 cut(s) 487
BmsI GCATC 3 cut(s) 43, 86, 413
BplI GAGNNNNNCTC 2 cut(s) 328, 360
Bpu10I CCTNAGC 2 cut(s) 1044, 1164
BpuEI CTTGAG 2 cut(s) 429, 869
BpuMI CCSGG 1 cut(s) 487
Bsa29I ATCGAT 1 cut(s) 262
BsaAI YACGTR 2 cut(s) 748, 1145
BsaI GGTCTC 1 cut(s) 1189
BsaXI ACNNNNNCTCC 2 cut(s) 295, 325
Bsc4I CCNNNNNNNGG 1 cut(s) 1133
Bse1I ACTGG 1 cut(s) 887
Bse3DI GCAATG 4 cut(s) 140, 212, 1080, 1281
BseCI ATCGAT 1 cut(s) 262
BseGI GGATG 4 cut(s) 271, 454, 691, 742
BseLI CCNNNNNNNGG 1 cut(s) 1133
BseMI GCAATG 4 cut(s) 140, 212, 1080, 1281
BseMII CTCAG 2 cut(s) 907, 1035
BseNI ACTGG 1 cut(s) 887
BseRI GAGGAG 3 cut(s) 303, 854, 1277
BseSI GKGCMC 1 cut(s) 487
BseXI GCAGC 3 cut(s) 614, 1301, 1343
BseYI CCCAGC 1 cut(s) 980
BsgI GTGCAG 2 cut(s) 1308, 1350
Bsh1285I CGRYCG 1 cut(s) 1000
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 1 cut(s) 482
BshVI ATCGAT 1 cut(s) 262
BsiEI CGRYCG 1 cut(s) 1000
BsiSI CCGG 1 cut(s) 487
BslFI GGGAC 2 cut(s) 535, 997
BslI CCNNNNNNNGG 1 cut(s) 1133
BsmAI GTCTC 4 cut(s) 348, 500, 1189, 1373
BsmBI CGTCTC 2 cut(s) 348, 1373
BsmFI GGGAC 2 cut(s) 535, 997
BsmI GAATGC 2 cut(s) 235, 992
BsnI GGCC 1 cut(s) 5
Bso31I GGTCTC 1 cut(s) 1189
Bsp1286I GDGCHC 1 cut(s) 487
Bsp143I GATC 4 cut(s) 11, 263, 338, 1244
BspACI CCGC 2 cut(s) 217, 933
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 2 cut(s) 906, 1036
BspDI ATCGAT 1 cut(s) 262
BspLI GGNNCC 1 cut(s) 484
BspMI ACCTGC 3 cut(s) 139, 292, 1148
BspT107I GGYRCC 1 cut(s) 482
BspTNI GGTCTC 1 cut(s) 1189
BsrBI CCGCTC 1 cut(s) 933
BsrDI GCAATG 4 cut(s) 140, 212, 1080, 1281
BsrI ACTGG 1 cut(s) 887
BssMI GATC 4 cut(s) 11, 263, 338, 1244
BssSI CACGAG 1 cut(s) 510
Bst2BI CACGAG 1 cut(s) 510
Bst4CI ACNGT 1 cut(s) 1350
Bst6I CTCTTC 3 cut(s) 420, 465, 1053
BstAPI GCANNNNNTGC 1 cut(s) 40
BstBAI YACGTR 2 cut(s) 748, 1145
BstC8I GCNNGC 2 cut(s) 75, 402
BstDEI CTNAG 5 cut(s) 168, 466, 893, 1044, 1164
BstENI CCTNNNNNAGG 1 cut(s) 1131
BstF5I GGATG 4 cut(s) 271, 454, 691, 742
BstHHI GCGC 2 cut(s) 375, 421
BstKTI GATC 4 cut(s) 14, 266, 341, 1247
BstMAI GTCTC 4 cut(s) 348, 500, 1189, 1373
BstMBI GATC 4 cut(s) 11, 263, 338, 1244
BstMCI CGRYCG 1 cut(s) 1000
BstMWI GCNNNNNNNGC 8 cut(s) 40, 593, 764, 1232, 1280, 1289, 1331, 1364
BstNSI RCATGY 3 cut(s) 138, 332, 578
BstSCI CCNGG 1 cut(s) 485
BstSLI GKGCMC 1 cut(s) 487
BstV1I GCAGC 3 cut(s) 614, 1301, 1343
BstX2I RGATCY 1 cut(s) 1244
BstYI RGATCY 1 cut(s) 1244
Bsu15I ATCGAT 1 cut(s) 262
BsuRI GGCC 1 cut(s) 5
BsuTUI ATCGAT 1 cut(s) 262
BtrI CACGTC 1 cut(s) 500
BtsCI GGATG 4 cut(s) 271, 454, 691, 742
BtsIMutI CAGTG 1 cut(s) 840
BveI ACCTGC 3 cut(s) 139, 292, 1148
Cac8I GCNNGC 2 cut(s) 75, 402
CfoI GCGC 2 cut(s) 375, 421
Cfr13I GGNCC 3 cut(s) 20, 1121, 1160
ClaI ATCGAT 1 cut(s) 262
CseI GACGC 1 cut(s) 1394
CspCI CAANNNNNGTGG 2 cut(s) 1099, 1134
CviAII CATG 5 cut(s) 135, 329, 422, 575, 772
DdeI CTNAG 5 cut(s) 168, 466, 893, 1044, 1164
DpnI GATC 4 cut(s) 13, 265, 340, 1246
DpnII GATC 4 cut(s) 11, 263, 338, 1244
DriI GACNNNNNGTC 1 cut(s) 513
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 420, 465, 1053
Eam1105I GACNNNNNGTC 1 cut(s) 513
EarI CTCTTC 3 cut(s) 420, 465, 1053
Eco31I GGTCTC 1 cut(s) 1189
Eco47I GGWCC 3 cut(s) 20, 1121, 1160
Eco57I CTGAAG 1 cut(s) 1190
Eco72I CACGTG 1 cut(s) 748
EcoNI CCTNNNNNAGG 1 cut(s) 1131
EcoO109I RGGNCCY 2 cut(s) 20, 1160
Esp3I CGTCTC 2 cut(s) 348, 1373
FaeI CATG 5 cut(s) 138, 332, 425, 578, 775
FaqI GGGAC 2 cut(s) 535, 997
FatI CATG 5 cut(s) 134, 328, 421, 574, 771
FauNDI CATATG 1 cut(s) 369
Fnu4HI GCNGC 3 cut(s) 628, 1290, 1332
FokI GGATG 4 cut(s) 258, 441, 698, 749
Fsp4HI GCNGC 3 cut(s) 628, 1290, 1332
FspAI RTGCGCAY 1 cut(s) 420
FspBI CTAG 5 cut(s) 96, 228, 1284, 1326, 1422
FspI TGCGCA 2 cut(s) 374, 420
GlaI GCGC 2 cut(s) 374, 420
GluI GCNGC 3 cut(s) 628, 1290, 1332
GsaI CCCAGC 1 cut(s) 984
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 487
HgaI GACGC 1 cut(s) 1394
HhaI GCGC 2 cut(s) 375, 421
Hin1II CATG 5 cut(s) 138, 332, 425, 578, 775
Hin6I GCGC 2 cut(s) 373, 419
HinP1I GCGC 2 cut(s) 373, 419
HincII GTYRAC 1 cut(s) 963
HindII GTYRAC 1 cut(s) 963
HinfI GANTC 6 cut(s) 304, 378, 437, 508, 830, 1061
HpaI GTTAAC 1 cut(s) 963
HpaII CCGG 1 cut(s) 487
HphI GGTGA 3 cut(s) 351, 515, 1031
Hpy166II GTNNAC 2 cut(s) 963, 1124
Hpy188I TCNGA 2 cut(s) 1066, 1081
Hpy188III TCNNGA 3 cut(s) 569, 1043, 1208
Hpy8I GTNNAC 2 cut(s) 963, 1124
Hpy99I CGWCG 1 cut(s) 501
HpyAV CCTTC 4 cut(s) 261, 327, 1273, 1315
HpyCH4III ACNGT 1 cut(s) 1350
HpyCH4IV ACGT 3 cut(s) 499, 747, 1144
HpyF10VI GCNNNNNNNGC 8 cut(s) 40, 593, 764, 1232, 1280, 1289, 1331, 1364
HpyF3I CTNAG 5 cut(s) 168, 466, 893, 1044, 1164
HpySE526I ACGT 3 cut(s) 499, 747, 1144
Hsp92II CATG 5 cut(s) 138, 332, 425, 578, 775
HspAI GCGC 2 cut(s) 373, 419
KspAI GTTAAC 1 cut(s) 963
Kzo9I GATC 4 cut(s) 11, 263, 338, 1244
LmnI GCTCC 3 cut(s) 593, 652, 1154
Lsp1109I GCAGC 3 cut(s) 614, 1301, 1343
LweI GCATC 3 cut(s) 43, 86, 413
MaeI CTAG 5 cut(s) 96, 228, 1284, 1326, 1422
MaeII ACGT 3 cut(s) 499, 747, 1144
MalI GATC 4 cut(s) 13, 265, 340, 1246
MbiI CCGCTC 1 cut(s) 933
MboI GATC 4 cut(s) 11, 263, 338, 1244
MfeI CAATTG 3 cut(s) 38, 898, 1113
MflI RGATCY 1 cut(s) 1244
MhlI GDGCHC 1 cut(s) 487
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 4 cut(s) 298, 387, 502, 1070
MmeI TCCRAC 1 cut(s) 1248
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 1 cut(s) 235
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 189, 660, 962, 1362
MslI CAYNNNNRTG 3 cut(s) 133, 669, 750
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 1 cut(s) 487
MspR9I CCNGG 1 cut(s) 487
MunI CAATTG 3 cut(s) 38, 898, 1113
Mva1269I GAATGC 2 cut(s) 235, 992
MwoI GCNNNNNNNGC 8 cut(s) 40, 593, 764, 1232, 1280, 1289, 1331, 1364
NciI CCSGG 1 cut(s) 487
NdeI CATATG 1 cut(s) 369
NdeII GATC 4 cut(s) 11, 263, 338, 1244
NlaIII CATG 5 cut(s) 138, 332, 425, 578, 775
NlaIV GGNNCC 1 cut(s) 484
NsbI TGCGCA 2 cut(s) 374, 420
NspI RCATGY 3 cut(s) 138, 332, 578
PaqCI CACCTGC 1 cut(s) 139
PciI ACATGT 1 cut(s) 328
PcsI WCGNNNNNNNCGW 1 cut(s) 712
PctI GAATGC 2 cut(s) 235, 992
PdmI GAANNNNTTC 1 cut(s) 235
PfeI GAWTC 2 cut(s) 437, 830
PkrI GCNGC 3 cut(s) 629, 1291, 1333
PleI GAGTC 4 cut(s) 298, 386, 502, 1069
PmaCI CACGTG 1 cut(s) 748
PmlI CACGTG 1 cut(s) 748
PpsI GAGTC 4 cut(s) 298, 386, 502, 1069
Ppu21I YACGTR 2 cut(s) 748, 1145
PpuMI RGGWCCY 2 cut(s) 20, 1160
PscI ACATGT 1 cut(s) 328
PsiI TTATAA 1 cut(s) 176
Psp5II RGGWCCY 2 cut(s) 20, 1160
PspCI CACGTG 1 cut(s) 748
PspFI CCCAGC 1 cut(s) 980
PspN4I GGNNCC 1 cut(s) 484
PspPI GGNCC 3 cut(s) 20, 1121, 1160
PspPPI RGGWCCY 2 cut(s) 20, 1160
PsuI RGATCY 1 cut(s) 1244
RseI CAYNNNNRTG 3 cut(s) 133, 669, 750
SaqAI TTAA 4 cut(s) 189, 660, 962, 1362
SatI GCNGC 3 cut(s) 628, 1290, 1332
Sau3AI GATC 4 cut(s) 11, 263, 338, 1244
Sau96I GGNCC 3 cut(s) 20, 1121, 1160
SchI GAGTC 4 cut(s) 298, 387, 502, 1070
ScrFI CCNGG 1 cut(s) 487
SduI GDGCHC 1 cut(s) 487
SfaNI GCATC 3 cut(s) 43, 86, 413
SinI GGWCC 3 cut(s) 20, 1121, 1160
SmiMI CAYNNNNRTG 3 cut(s) 133, 669, 750
SmlI CTYRAG 2 cut(s) 444, 848
SmoI CTYRAG 2 cut(s) 444, 848
SsiI CCGC 2 cut(s) 217, 933
SspMI CTAG 5 cut(s) 96, 228, 1284, 1326, 1422
StyD4I CCNGG 1 cut(s) 485
TaaI ACNGT 1 cut(s) 1350
TaiI ACGT 3 cut(s) 502, 750, 1147
TaqI TCGA 3 cut(s) 262, 280, 698
TaqII GACCGA 1 cut(s) 986
TfiI GAWTC 2 cut(s) 437, 830
Tru1I TTAA 4 cut(s) 189, 660, 962, 1362
Tru9I TTAA 4 cut(s) 189, 660, 962, 1362
TscAI CASTG 1 cut(s) 840
TseI GCWGC 3 cut(s) 627, 1289, 1331
TspDTI ATGAA 9 cut(s) 438, 753, 788, 843, 1026, 1071, 1292, 1317, 1359
TspGWI ACGGA 4 cut(s) 704, 1119, 1234, 1397
TspRI CASTG 1 cut(s) 840
VpaK11BI GGWCC 3 cut(s) 20, 1121, 1160
XagI CCTNNNNNAGG 1 cut(s) 1131
XapI RAATTY 4 cut(s) 26, 722, 886, 1174
XceI RCATGY 3 cut(s) 138, 332, 578
XmnI GAANNNNTTC 1 cut(s) 235
XspI CTAG 5 cut(s) 96, 228, 1284, 1326, 1422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.