Prupe.7G105300_v2.0.a1

bromo domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000178
Physical Location & Seq
Forward (+)
13431792 .. 13440159
8368 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G105300.5

Sequence Viewer

Length: 1947 bp
ATGAGGCGCAAACAAGCCTGCAGGGGAAGGGGAAGGCCACGAAAGAAACCCAATGTGGTCAGTGAGAGAGTAGTAAGCGAGAGAATGGTTAATGAGAAATTGATCAATGAGAAAGAAGTAGCATTCTTGAATTTTGTGAGTCAAAATGTTGAAGAAGGAAATGATATTGGGTGGAATCAATCTGATAACGAAGACCATAATGATGAGGAATTTGACCCTGAAATGGAGATTGATTCAGGTAATTCTTCTTCTTCTTCAATGGGGAGTGACTGGTCGTGCAGGGATCAAAATGTGAGCTCCATGGATAGGACTGTGCAGAGATTGCTTAGGAAGTATGGTGAAGTGAATCTCCAGATGGAAAACTCATCCAAAAAGATTGATGGTGCACAAACTAAGCCATTGCAAGTCTTTGGTTCTTGGAGTAGATTCCAGAATGAGCAAGAGGCGCCTTCACATGATCCTTGCTGTAACAAAAAAGAATTAAGCGCTTCTCTGGCGGTTATTAAGAGGGTTATGAAAATGGATGCAGCTGTACCTTTCAACATTCCTGTGGATCCAATTGCTCTGAGATTACCTGATTACTTTGATGTCATAGATACACCAATGGATTTTGGAACAATATGCAACCATCTTGAAAATGGTACTAAGTACACGAACTCGGAGGATGTATTCAAGGACGTCCAATACATTTGGAAGAACTGCTACAACTATTACAATGAGGGTAACTTTGTTTTGGATCTTATGAAAAGGGTGGAGGCAAAGTTCATGATGTATTGGACAGCTGCTGGTCTGTCCAGTAAAGAACCAGGGACAAGTAGCAGAGGTGATGGAGCAGCTTTACAGTTGCATCAAGCACTTATCAAGGAAGACTTTTTAAGAAGCTCTAATGTGGGGAAAAGGAGGACACGAGGACCCACCCGTAACCTTAAACTAGCTCATATTCCGATTGGGGAAAGATTTGAAATCAGCTGGAGGAACCGGAGAGCTGTAGGTGATAGCTCCACAATTTTCAAATCAGAGTGTACAGCCCTGGTTAGGCAAACCCGGGAGCTACCCCTGCAGGTCAAGTCGTGGAAGAAAATCCCATTTGAGATTAAAAAGAAGGCATTTGAACATATGTTGAAGCGTTTCAAAGTTGAAGATCACATGACATGGGTATTGGACCAGATTCATAGATCCTACCACAATTATCGGCATTACCTCAAGAAGATATGGTATGAAACATGTGAGACAACTGAGGAAGCACGGAAAAAAATACCACCAAATGTTGCGGAGGATGATTGGCAGTATCTTATAAACATGTGGAGCTCACCTGAATGGGAGTTAATTAGTAAGAAAAACGTGGAGAATCGTTCCAAAAATAACATAATCCACACATCTGGTTCCAAGAGTTTCTCACAAATCCGTGAGGAAGAGAGAAAGAAGACTGGAAATGACCCTGGACGTACATTTCTATGGGAACTTACCCACGTGCGGCCTGATGGACTAGCTGCAAATCCAGCTTCACAGGAGGCATTGTCAAAGCTCAAGAAACTTTATACTCAAATGTCTGTGGAGAACTCAGAGATGACTGAAGACGAGATTTTTGTAAAGGTTTTTGGACCTGAGCGTTCGAGTCGGGTGCGTGGTTATGGAAATGGTGTAACCCCAAAAGAGTTATGGGGCCCATCATCTTCATCATCATCTACTGTTAGTGAGCTCAGAAGGCAACTTGAGGAATCAAAGCAGCGACAAGAGGAGTCTGAACGAAGAAGTGCTGCTGAGGTACAGGGCTTGAAGGAGCAACTTGGTCGGGTTGAGGGTTTGCTATCAGTTCAAATGAATCGGTTTGAAGGTTTACTAGTACAGTTGACGAGTCATATGCACTCCCCGGCCCAAATTGAGAGATGTACTGAAAATCCACCCTCCCGAAATGGCCGCCCACGAATGACCCGACCTAGAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bromodomain Transposase_24

Protein Analysis

649

Amino Acids

74.92

Weight (kDa)

8.99

Isoelectric Point (pI)

53.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000178)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G40087 AT3G30200
fragaria_vesca FvH4_1g23271 FvH4_3g22812 FvH4_3g22813 FvH4_3g31042 FvH4_3g31043 FvH4_7g03653
malus_domestica MD05G1321200.v1.1 MD09G1027200.v1.1 MD15G1434900.v1.1 MD15G1435000.v1.1 MD15G1435100.v1.1
prunus_persica Prupe.1G578800_v2.0.a1 Prupe.1G578800_v2.0.a1 Prupe.1G578800_v2.0.a1 Prupe.2G062700_v2.0.a1 Prupe.5G033400_v2.0.a1 Prupe.7G022900_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1
pyrus_communis pycom03g07600 pycom03g11360 pycom05g02870 pycom111g02130 pycom15g38370 pycom15g38380
rosa_chinensis RchiOBHm_Chr1g0346371 RchiOBHm_Chr4g0402051 RchiOBHm_Chr4g0414991 RchiOBHm_Chr5g0051011 RchiOBHm_Chr5g0051181 RchiOBHm_Chr6g0273071 RchiOBHm_Chr7g0218301 RchiOBHm_Chr7g0241081
rosa_laevigata RLG00000007709 RLG00000008953 RLG00000012400 RLG00000012401 RLG00000013805 RLG00000014199 RLG00000014726 RLG00000017792 RLG00000017793 RLG00000018860 RLG00000020749 RLG00000030708 RLG00000033507
rosa_multiflora Rmu_co8373761.1_g000001 Rmu_sc0000028.1_g000023 Rmu_sc0000235.1_g000040 Rmu_sc0000293.1_g000017 Rmu_sc0000293.1_g000019 Rmu_sc0000651.1_g000012 Rmu_sc0000870.1_g000051 Rmu_sc0001167.1_g000031 Rmu_sc0001373.1_g000039 Rmu_sc0001861.1_g000055 Rmu_sc0001891.1_g000038 Rmu_sc0001909.1_g000015 Rmu_sc0002500.1_g000002 Rmu_sc0002868.1_g000036 Rmu_sc0002868.1_g000038 Rmu_sc0002868.1_g000039 Rmu_sc0003379.1_g000001 Rmu_sc0003778.1_g000005 Rmu_sc0003778.1_g000006 Rmu_sc0010475.1_g000011 Rmu_sc0015271.1_g000002 Rmu_sc0015271.1_g000003 Rmu_sc0017962.1_g000001 Rmu_sc0017962.1_g000003 Rmu_sc0022129.1_g000004 Rmu_sc0025694.1_g000003 Rmu_sc0025694.1_g000004
rosa_roxburghii Rroxscaffold_1G00031640 Rroxscaffold_1G00047620 Rroxscaffold_1G00047630 Rroxscaffold_1G00050560 Rroxscaffold_1G00050570 Rroxscaffold_1G00054800 Rroxscaffold_1G00055890 Rroxscaffold_2G00108230 Rroxscaffold_3G00240860 Rroxscaffold_4G00299670 Rroxscaffold_4G00299680 Rroxscaffold_4G00299690 Rroxscaffold_4G00306320 Rroxscaffold_4G00306340 Rroxscaffold_5G00341060 Rroxscaffold_5G00342000 Rroxscaffold_5G00355660 Rroxscaffold_5G00357170 Rroxscaffold_6G00399490 Rroxscaffold_6G00408400 Rroxscaffold_7G00189260 Rroxscaffold_7G00199620 Rroxscaffold_7G00215470
rosa_rugosa Rorug02G0117600 Rorug02G0117700 Rorug04G0116400 Rorug06G0103200
rosa_samantha Rh1AG062800 Rh1AG073700 Rh1CG091700 Rh1DG077600 Rh1DG077700 Rh1DG077800 Rh1DG117400 Rh1DG146300 Rh2BG193300 Rh2BG193400 Rh2BG265300 Rh2BG413400 Rh3CG365500 Rh4AG315400 Rh4BG323100 Rh4BG323200 Rh4CG071400 Rh4CG142500 Rh4CG203300 Rh4CG338300 Rh4DG079300 Rh4DG079400 Rh4DG217000 Rh4DG217100 Rh4DG217200 Rh4DG217300 Rh5AG128300 Rh5AG239900 Rh5AG465900 Rh5BG348600 Rh5BG387900 Rh5BG388000 Rh5CG181800 Rh5CG181900 Rh5CG271000 Rh5CG271100 Rh5DG127100 Rh5DG138400 Rh5DG168200 Rh5DG168300 Rh5DG361500 Rh5DG460400 Rh6AG045400 Rh6AG058600 Rh6BG275000 Rh6CG089700 Rh6DG182300 Rh6DG182400 Rh6DG207300 Rh6DG207400 Rh7BG374000 Rh7BG390600 Rh7BG390700 Rh7BG390800
rosa_wichuraiana Rw0G018690 Rw1G007320 Rw4G008510 Rw5G011510 Rw5G021830 Rw6G024150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1295
AatII GACGTC 1 cut(s) 681
Acc36I ACCTGC 1 cut(s) 1051
AccB1I GGYRCC 1 cut(s) 445
AciI CCGC 4 cut(s) 497, 1271, 1474, 1918
AclWI GGATC 6 cut(s) 291, 452, 548, 561, 744, 1170
AcoI YGGCCR 1 cut(s) 1915
AcsI RAATTY 2 cut(s) 130, 209
AcuI CTGAAG 1 cut(s) 1593
AcvI CACGTG 1 cut(s) 1471
AcyI GRCGYC 2 cut(s) 446, 678
AfaI GTAC 8 cut(s) 534, 643, 650, 1024, 1447, 1767, 1845, 1891
AfeI AGCGCT 1 cut(s) 487
AfiI CCNNNNNNNGG 4 cut(s) 223, 306, 1035, 1473
AflIII ACRYGT 2 cut(s) 1223, 1299
AhlI ACTAGT 1 cut(s) 1840
AjnI CCWGG 3 cut(s) 805, 1029, 1438
AloI GAACNNNNNNTCC 2 cut(s) 746, 778
Alw21I GWGCWC 4 cut(s) 299, 388, 1310, 1701
Alw26I GTCTC 1 cut(s) 1223
Alw44I GTGCAC 1 cut(s) 384
AlwI GGATC 6 cut(s) 291, 452, 548, 561, 744, 1170
AlwNI CAGNNNCTG 1 cut(s) 785
Ama87I CYCGRG 1 cut(s) 1044
Aor51HI AGCGCT 1 cut(s) 487
AoxI GGCC 5 cut(s) 35, 1475, 1663, 1872, 1915
ApaI GGGCCC 1 cut(s) 1667
ApaLI GTGCAC 1 cut(s) 384
ApeKI GCWGC 6 cut(s) 527, 782, 833, 1490, 1726, 1757
ApoI RAATTY 2 cut(s) 130, 209
ArsI GACNNNNNNTTYG 2 cut(s) 1568, 1600
Asp700I GAANNNNTTC 1 cut(s) 1127
AspLEI GCGC 3 cut(s) 9, 448, 488
AspS9I GGNCC 6 cut(s) 911, 1162, 1601, 1663, 1664, 1873
AsuC2I CCSGG 3 cut(s) 1045, 1046, 1871
AsuHPI GGTGA 4 cut(s) 350, 836, 1004, 1302
AvaI CYCGRG 1 cut(s) 1044
AvaII GGWCC 3 cut(s) 911, 1162, 1601
BaeGI GKGCMC 2 cut(s) 388, 1667
BamHI GGATCC 1 cut(s) 553
BanI GGYRCC 1 cut(s) 445
BanII GRGCYC 4 cut(s) 299, 1310, 1667, 1701
BarI GAAGNNNNNNTAC 4 cut(s) 232, 264, 686, 718
BauI CACGAG 1 cut(s) 906
BbrPI CACGTG 1 cut(s) 1471
BbsI GAAGAC 4 cut(s) 198, 873, 1430, 1581
Bbv12I GWGCWC 4 cut(s) 299, 388, 1310, 1701
BbvCI CCTCAGC 1 cut(s) 1761
BbvI GCAGC 6 cut(s) 539, 769, 845, 1477, 1738, 1744
BccI CCATC 6 cut(s) 349, 374, 636, 821, 1475, 1675
BcgI CGANNNNNNTGC 6 cut(s) 1603, 1637, 1772, 1806, 1843, 1877
BciT130I CCWGG 3 cut(s) 807, 1031, 1440
BclI TGATCA 1 cut(s) 102
BcnI CCSGG 3 cut(s) 1045, 1046, 1871
BcoDI GTCTC 1 cut(s) 1223
BcuI ACTAGT 1 cut(s) 1840
BfaI CTAG 4 cut(s) 932, 1487, 1841, 1938
BfmI CTRYAG 3 cut(s) 19, 987, 1058
BfoI RGCGCY 2 cut(s) 449, 489
BfuAI ACCTGC 1 cut(s) 1051
BisI GCNGC 8 cut(s) 528, 783, 834, 1475, 1491, 1727, 1758, 1918
BlsI GCNGC 8 cut(s) 529, 784, 835, 1476, 1492, 1728, 1759, 1919
Bme1390I CCNGG 6 cut(s) 807, 1031, 1045, 1046, 1440, 1871
Bme18I GGWCC 3 cut(s) 911, 1162, 1601
BmeT110I CYCGRG 1 cut(s) 1044
BmgT120I GGNCC 6 cut(s) 911, 1162, 1601, 1663, 1664, 1873
BmiI GGNNCC 7 cut(s) 447, 555, 913, 977, 1384, 1664, 1665
BmrFI CCNGG 6 cut(s) 807, 1031, 1045, 1046, 1440, 1871
BmsI GCATC 2 cut(s) 514, 856
BpiI GAAGAC 4 cut(s) 198, 873, 1430, 1581
BpmI CTGGAG 2 cut(s) 335, 991
Bpu10I CCTNAGC 3 cut(s) 326, 1605, 1761
BpuEI CTTGAG 3 cut(s) 1187, 1511, 1733
BpuMI CCSGG 3 cut(s) 1045, 1046, 1871
BsaAI YACGTR 1 cut(s) 1471
BsaHI GRCGYC 2 cut(s) 446, 678
BsaJI CCNNGG 6 cut(s) 300, 806, 1029, 1044, 1438, 1869
BsaWI WCCGGW 1 cut(s) 978
BsaXI ACNNNNNCTCC 4 cut(s) 746, 776, 1502, 1532
Bsc4I CCNNNNNNNGG 4 cut(s) 223, 306, 1035, 1473
Bse1I ACTGG 3 cut(s) 275, 795, 1432
Bse3DI GCAATG 1 cut(s) 398
BseBI CCWGG 3 cut(s) 807, 1031, 1440
BseDI CCNNGG 6 cut(s) 300, 806, 1029, 1044, 1438, 1869
BseGI GGATG 4 cut(s) 365, 529, 670, 1282
BseLI CCNNNNNNNGG 4 cut(s) 223, 306, 1035, 1473
BseMI GCAATG 1 cut(s) 398
BseMII CTCAG 6 cut(s) 557, 1227, 1575, 1596, 1714, 1752
BseNI ACTGG 3 cut(s) 275, 795, 1432
BseRI GAGGAG 1 cut(s) 1751
BseSI GKGCMC 2 cut(s) 388, 1667
BseXI GCAGC 6 cut(s) 539, 769, 845, 1477, 1738, 1744
BsgI GTGCAG 2 cut(s) 298, 335
BshFI GGCC 5 cut(s) 37, 1477, 1665, 1874, 1917
BshNI GGYRCC 1 cut(s) 445
BsiHKAI GWGCWC 4 cut(s) 299, 388, 1310, 1701
BsiHKCI CYCGRG 1 cut(s) 1044
BsiSI CCGG 3 cut(s) 979, 1045, 1871
BslFI GGGAC 1 cut(s) 823
BslI CCNNNNNNNGG 4 cut(s) 223, 306, 1035, 1473
BsmAI GTCTC 1 cut(s) 1223
BsmFI GGGAC 1 cut(s) 823
BsmI GAATGC 1 cut(s) 122
BsnI GGCC 5 cut(s) 37, 1477, 1665, 1874, 1917
BsoBI CYCGRG 1 cut(s) 1044
Bsp120I GGGCCC 1 cut(s) 1663
Bsp1286I GDGCHC 5 cut(s) 299, 388, 1310, 1667, 1701
Bsp1407I TGTACA 1 cut(s) 1022
Bsp143I GATC 7 cut(s) 102, 283, 457, 553, 736, 1141, 1175
Bsp19I CCATGG 1 cut(s) 300
BspACI CCGC 4 cut(s) 497, 1271, 1474, 1918
BspANI GGCC 5 cut(s) 37, 1477, 1665, 1874, 1917
BspCNI CTCAG 6 cut(s) 558, 1228, 1574, 1597, 1713, 1753
BspHI TCATGA 1 cut(s) 765
BspLI GGNNCC 7 cut(s) 447, 555, 913, 977, 1384, 1664, 1665
BspMAI CTGCAG 2 cut(s) 23, 1062
BspMI ACCTGC 1 cut(s) 1051
BspPI GGATC 6 cut(s) 291, 452, 548, 561, 744, 1170
BspT107I GGYRCC 1 cut(s) 445
BsrDI GCAATG 1 cut(s) 398
BsrGI TGTACA 1 cut(s) 1022
BsrI ACTGG 3 cut(s) 275, 795, 1432
BssECI CCNNGG 6 cut(s) 300, 806, 1029, 1044, 1438, 1869
BssMI GATC 7 cut(s) 102, 283, 457, 553, 736, 1141, 1175
BssNI GRCGYC 2 cut(s) 446, 678
BssSI CACGAG 1 cut(s) 906
BssT1I CCWWGG 1 cut(s) 300
Bst2BI CACGAG 1 cut(s) 906
Bst2UI CCWGG 3 cut(s) 807, 1031, 1440
Bst4CI ACNGT 4 cut(s) 313, 843, 1690, 1848
Bst6I CTCTTC 1 cut(s) 1407
BstACI GRCGYC 2 cut(s) 446, 678
BstAPI GCANNNNNTGC 1 cut(s) 322
BstAUI TGTACA 1 cut(s) 1022
BstBAI YACGTR 1 cut(s) 1471
BstC8I GCNNGC 1 cut(s) 19
BstDEI CTNAG 9 cut(s) 326, 393, 566, 645, 1236, 1561, 1605, 1700, 1761
BstDSI CCRYGG 1 cut(s) 300
BstF5I GGATG 4 cut(s) 365, 529, 670, 1282
BstH2I RGCGCY 2 cut(s) 449, 489
BstHHI GCGC 3 cut(s) 9, 448, 488
BstKTI GATC 7 cut(s) 105, 286, 460, 556, 739, 1144, 1178
BstMAI GTCTC 1 cut(s) 1223
BstMBI GATC 7 cut(s) 102, 283, 457, 553, 736, 1141, 1175
BstMWI GCNNNNNNNGC 6 cut(s) 322, 445, 494, 1057, 1499, 1705
BstNI CCWGG 3 cut(s) 807, 1031, 1440
BstNSI RCATGY 2 cut(s) 1227, 1303
BstSCI CCNGG 6 cut(s) 805, 1029, 1043, 1044, 1438, 1869
BstSFI CTRYAG 3 cut(s) 19, 987, 1058
BstSLI GKGCMC 2 cut(s) 388, 1667
BstV1I GCAGC 6 cut(s) 539, 769, 845, 1477, 1738, 1744
BstV2I GAAGAC 4 cut(s) 198, 873, 1430, 1581
BstX2I RGATCY 3 cut(s) 553, 736, 1175
BstXI CCANNNNNNTGG 1 cut(s) 1379
BstYI RGATCY 3 cut(s) 553, 736, 1175
BsuRI GGCC 5 cut(s) 37, 1477, 1665, 1874, 1917
BtgI CCRYGG 1 cut(s) 300
BtsCI GGATG 4 cut(s) 365, 529, 670, 1282
BtsIMutI CAGTG 1 cut(s) 67
BveI ACCTGC 1 cut(s) 1051
Cac8I GCNNGC 1 cut(s) 19
CaiI CAGNNNCTG 1 cut(s) 785
CciI TCATGA 1 cut(s) 765
CfoI GCGC 3 cut(s) 9, 448, 488
Cfr13I GGNCC 6 cut(s) 911, 1162, 1601, 1663, 1664, 1873
Cfr9I CCCGGG 1 cut(s) 1044
Csp6I GTAC 8 cut(s) 533, 642, 649, 1023, 1446, 1766, 1844, 1890
CviAII CATG 7 cut(s) 301, 455, 766, 1147, 1152, 1224, 1300
CviQI GTAC 8 cut(s) 533, 642, 649, 1023, 1446, 1766, 1844, 1890
DdeI CTNAG 9 cut(s) 326, 393, 566, 645, 1236, 1561, 1605, 1700, 1761
DinI GGCGCC 1 cut(s) 447
DpnI GATC 7 cut(s) 104, 285, 459, 555, 738, 1143, 1177
DpnII GATC 7 cut(s) 102, 283, 457, 553, 736, 1141, 1175
EaeI YGGCCR 1 cut(s) 1915
Eam1104I CTCTTC 1 cut(s) 1407
EarI CTCTTC 1 cut(s) 1407
Ecl136II GAGCTC 3 cut(s) 297, 1308, 1699
Eco130I CCWWGG 1 cut(s) 300
Eco24I GRGCYC 4 cut(s) 299, 1310, 1667, 1701
Eco47I GGWCC 3 cut(s) 911, 1162, 1601
Eco47III AGCGCT 1 cut(s) 487
Eco53kI GAGCTC 3 cut(s) 297, 1308, 1699
Eco57I CTGAAG 1 cut(s) 1593
Eco72I CACGTG 1 cut(s) 1471
Eco88I CYCGRG 1 cut(s) 1044
EcoICRI GAGCTC 3 cut(s) 297, 1308, 1699
EcoO109I RGGNCCY 2 cut(s) 911, 1663
EcoRII CCWGG 3 cut(s) 805, 1029, 1438
EcoT14I CCWWGG 1 cut(s) 300
EcoT38I GRGCYC 4 cut(s) 299, 1310, 1667, 1701
EgeI GGCGCC 1 cut(s) 447
EheI GGCGCC 1 cut(s) 447
ErhI CCWWGG 1 cut(s) 300
FaeI CATG 7 cut(s) 304, 458, 769, 1150, 1155, 1227, 1303
FalI AAGNNNNNCTT 2 cut(s) 854, 886
FaqI GGGAC 1 cut(s) 823
FatI CATG 7 cut(s) 300, 454, 765, 1146, 1151, 1223, 1299
FauNDI CATATG 2 cut(s) 1116, 1860
FbaI TGATCA 1 cut(s) 102
Fnu4HI GCNGC 8 cut(s) 528, 783, 834, 1475, 1491, 1727, 1758, 1918
FokI GGATG 4 cut(s) 352, 536, 677, 1289
FriOI GRGCYC 4 cut(s) 299, 1310, 1667, 1701
Fsp4HI GCNGC 8 cut(s) 528, 783, 834, 1475, 1491, 1727, 1758, 1918
FspBI CTAG 4 cut(s) 932, 1487, 1841, 1938
GlaI GCGC 3 cut(s) 8, 447, 487
GluI GCNGC 8 cut(s) 528, 783, 834, 1475, 1491, 1727, 1758, 1918
GsuI CTGGAG 2 cut(s) 335, 991
HaeII RGCGCY 2 cut(s) 449, 489
HaeIII GGCC 5 cut(s) 37, 1477, 1665, 1874, 1917
HapII CCGG 3 cut(s) 979, 1045, 1871
HhaI GCGC 3 cut(s) 9, 448, 488
Hin1I GRCGYC 2 cut(s) 446, 678
Hin1II CATG 7 cut(s) 304, 458, 769, 1150, 1155, 1227, 1303
Hin6I GCGC 3 cut(s) 7, 446, 486
HinP1I GCGC 3 cut(s) 7, 446, 486
HincII GTYRAC 1 cut(s) 1851
HindII GTYRAC 1 cut(s) 1851
HpaII CCGG 3 cut(s) 979, 1045, 1871
HphI GGTGA 4 cut(s) 350, 836, 1004, 1302
Hpy166II GTNNAC 5 cut(s) 386, 651, 1023, 1838, 1851
Hpy188I TCNGA 8 cut(s) 184, 567, 661, 945, 1018, 1564, 1703, 1744
Hpy188III TCNNGA 8 cut(s) 127, 352, 430, 632, 766, 1204, 1528, 1908
Hpy8I GTNNAC 5 cut(s) 386, 651, 1023, 1838, 1851
HpyAV CCTTC 8 cut(s) 21, 27, 149, 459, 1096, 1698, 1771, 1826
HpyCH4III ACNGT 4 cut(s) 313, 843, 1690, 1848
HpyCH4IV ACGT 4 cut(s) 678, 1341, 1444, 1470
HpyF10VI GCNNNNNNNGC 6 cut(s) 322, 445, 494, 1057, 1499, 1705
HpyF3I CTNAG 9 cut(s) 326, 393, 566, 645, 1236, 1561, 1605, 1700, 1761
HpySE526I ACGT 4 cut(s) 678, 1341, 1444, 1470
Hsp92I GRCGYC 2 cut(s) 446, 678
Hsp92II CATG 7 cut(s) 304, 458, 769, 1150, 1155, 1227, 1303
HspAI GCGC 3 cut(s) 7, 446, 486
KasI GGCGCC 1 cut(s) 445
Ksp22I TGATCA 1 cut(s) 102
Kzo9I GATC 7 cut(s) 102, 283, 457, 553, 736, 1141, 1175
LmnI GCTCC 6 cut(s) 302, 830, 1004, 1048, 1305, 1780
Lsp1109I GCAGC 6 cut(s) 539, 769, 845, 1477, 1738, 1744
LweI GCATC 2 cut(s) 514, 856
MaeI CTAG 4 cut(s) 932, 1487, 1841, 1938
MaeII ACGT 4 cut(s) 678, 1341, 1444, 1470
MaeIII GTNAC 5 cut(s) 266, 467, 722, 920, 1642
MalI GATC 7 cut(s) 104, 285, 459, 555, 738, 1143, 1177
MboI GATC 7 cut(s) 102, 283, 457, 553, 736, 1141, 1175
MfeI CAATTG 1 cut(s) 558
MflI RGATCY 3 cut(s) 553, 736, 1175
MhlI GDGCHC 5 cut(s) 299, 388, 1310, 1667, 1701
Mly113I GGCGCC 1 cut(s) 446
MlyI GAGTC 4 cut(s) 148, 1624, 1748, 1864
MroXI GAANNNNTTC 1 cut(s) 1127
MseI TTAA 7 cut(s) 90, 482, 504, 875, 927, 1095, 1325
MslI CAYNNNNRTG 4 cut(s) 201, 548, 1315, 1453
MspA1I CMGCKG 3 cut(s) 530, 782, 969
MspI CCGG 3 cut(s) 979, 1045, 1871
MspR9I CCNGG 6 cut(s) 807, 1031, 1045, 1046, 1440, 1871
MunI CAATTG 1 cut(s) 558
Mva1269I GAATGC 1 cut(s) 122
MvaI CCWGG 3 cut(s) 807, 1031, 1440
MwoI GCNNNNNNNGC 6 cut(s) 322, 445, 494, 1057, 1499, 1705
NarI GGCGCC 1 cut(s) 446
NciI CCSGG 3 cut(s) 1045, 1046, 1871
NcoI CCATGG 1 cut(s) 300
NdeI CATATG 2 cut(s) 1116, 1860
NdeII GATC 7 cut(s) 102, 283, 457, 553, 736, 1141, 1175
NlaIII CATG 7 cut(s) 304, 458, 769, 1150, 1155, 1227, 1303
NlaIV GGNNCC 7 cut(s) 447, 555, 913, 977, 1384, 1664, 1665
NmuCI GTSAC 1 cut(s) 266
NspI RCATGY 2 cut(s) 1227, 1303
PagI TCATGA 1 cut(s) 765
PciI ACATGT 2 cut(s) 1223, 1299
PcsI WCGNNNNNNNCGW 1 cut(s) 1930
PctI GAATGC 1 cut(s) 122
PdmI GAANNNNTTC 1 cut(s) 1127
PfeI GAWTC 8 cut(s) 175, 233, 346, 426, 1168, 1348, 1718, 1822
PkrI GCNGC 8 cut(s) 529, 784, 835, 1476, 1492, 1728, 1759, 1919
PleI GAGTC 4 cut(s) 147, 1623, 1747, 1863
PluTI GGCGCC 1 cut(s) 449
PmaCI CACGTG 1 cut(s) 1471
PmlI CACGTG 1 cut(s) 1471
PpsI GAGTC 4 cut(s) 147, 1623, 1747, 1863
Ppu21I YACGTR 1 cut(s) 1471
PpuMI RGGWCCY 1 cut(s) 911
PscI ACATGT 2 cut(s) 1223, 1299
PsiI TTATAA 1 cut(s) 1295
Psp124BI GAGCTC 3 cut(s) 299, 1310, 1701
Psp5II RGGWCCY 1 cut(s) 911
Psp6I CCWGG 3 cut(s) 805, 1029, 1438
PspCI CACGTG 1 cut(s) 1471
PspGI CCWGG 3 cut(s) 805, 1029, 1438
PspN4I GGNNCC 7 cut(s) 447, 555, 913, 977, 1384, 1664, 1665
PspOMI GGGCCC 1 cut(s) 1663
PspPI GGNCC 6 cut(s) 911, 1162, 1601, 1663, 1664, 1873
PspPPI RGGWCCY 1 cut(s) 911
PstI CTGCAG 2 cut(s) 23, 1062
PstNI CAGNNNCTG 1 cut(s) 785
PsuI RGATCY 3 cut(s) 553, 736, 1175
PvuII CAGCTG 3 cut(s) 530, 782, 969
RsaI GTAC 8 cut(s) 534, 643, 650, 1024, 1447, 1767, 1845, 1891
RsaNI GTAC 8 cut(s) 533, 642, 649, 1023, 1446, 1766, 1844, 1890
RseI CAYNNNNRTG 4 cut(s) 201, 548, 1315, 1453
SacI GAGCTC 3 cut(s) 299, 1310, 1701
SaqAI TTAA 7 cut(s) 90, 482, 504, 875, 927, 1095, 1325
SatI GCNGC 8 cut(s) 528, 783, 834, 1475, 1491, 1727, 1758, 1918
Sau3AI GATC 7 cut(s) 102, 283, 457, 553, 736, 1141, 1175
Sau96I GGNCC 6 cut(s) 911, 1162, 1601, 1663, 1664, 1873
SbfI CCTGCAGG 2 cut(s) 23, 1062
SchI GAGTC 4 cut(s) 148, 1624, 1748, 1864
ScrFI CCNGG 6 cut(s) 807, 1031, 1045, 1046, 1440, 1871
SdaI CCTGCAGG 2 cut(s) 23, 1062
SduI GDGCHC 5 cut(s) 299, 388, 1310, 1667, 1701
SfaNI GCATC 2 cut(s) 514, 856
SfcI CTRYAG 3 cut(s) 19, 987, 1058
SfoI GGCGCC 1 cut(s) 447
SinI GGWCC 3 cut(s) 911, 1162, 1601
SmaI CCCGGG 1 cut(s) 1046
SmiMI CAYNNNNRTG 4 cut(s) 201, 548, 1315, 1453
SmlI CTYRAG 3 cut(s) 1202, 1526, 1712
SmoI CTYRAG 3 cut(s) 1202, 1526, 1712
SpeI ACTAGT 1 cut(s) 1840
Sse8387I CCTGCAGG 2 cut(s) 23, 1062
SsiI CCGC 4 cut(s) 497, 1271, 1474, 1918
SspDI GGCGCC 1 cut(s) 445
SspMI CTAG 4 cut(s) 932, 1487, 1841, 1938
SstI GAGCTC 3 cut(s) 299, 1310, 1701
StyD4I CCNGG 6 cut(s) 805, 1029, 1043, 1044, 1438, 1869
StyI CCWWGG 1 cut(s) 300
TaaI ACNGT 4 cut(s) 313, 843, 1690, 1848
TaiI ACGT 4 cut(s) 681, 1344, 1447, 1473
TaqI TCGA 1 cut(s) 1613
TatI WGTACW 4 cut(s) 648, 1022, 1843, 1889
TauI GCSGC 2 cut(s) 1477, 1920
TfiI GAWTC 8 cut(s) 175, 233, 346, 426, 1168, 1348, 1718, 1822
Tru1I TTAA 7 cut(s) 90, 482, 504, 875, 927, 1095, 1325
Tru9I TTAA 7 cut(s) 90, 482, 504, 875, 927, 1095, 1325
TscAI CASTG 1 cut(s) 67
TseFI GTSAC 1 cut(s) 266
TseI GCWGC 6 cut(s) 527, 782, 833, 1490, 1726, 1757
Tsp45I GTSAC 1 cut(s) 266
TspDTI ATGAA 7 cut(s) 530, 754, 758, 1160, 1233, 1665, 1835
TspGWI ACGGA 2 cut(s) 1261, 1394
TspMI CCCGGG 1 cut(s) 1044
TspRI CASTG 1 cut(s) 67
VneI GTGCAC 1 cut(s) 384
VpaK11BI GGWCC 3 cut(s) 911, 1162, 1601
XapI RAATTY 2 cut(s) 130, 209
XceI RCATGY 2 cut(s) 1227, 1303
XcmI CCANNNNNNNNNTGG 2 cut(s) 635, 1656
XmaI CCCGGG 1 cut(s) 1044
XmnI GAANNNNTTC 1 cut(s) 1127
XspI CTAG 4 cut(s) 932, 1487, 1841, 1938
ZraI GACGTC 1 cut(s) 679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.