Rroxscaffold_2G00108230

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000178
Physical Location & Seq
Forward (+)
32214007 .. 32216818
2812 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00108230.1

Sequence Viewer

Length: 1338 bp
ATGGCCAAGAGATCACAAGGTCCTAAATTTTTGCATCAATTGCGAACATCAGCACTTCCACCAAACCACTTGCGAGCATCTGCTGAAAAGGTTTCTAGGATTGTAAAGCCTTTGGATAAACCTACAACACCTGCATGTCCATTGCAATCTTCAACTGAAAAGGTTTCTAAGGTTATAAAGCCTTTAGTTAAACCTACAACACTTTCAAGCCCATTGCGGTTATCTCCTAGAAAGCATTCAAAGACACAGCCTTCCACAAATCGATCAACACATCCTCGTCGACCTGCTATGCAGTCATCAAGGACTCCATCTCCTCCTTCTTCTCCACATGTTATGAGATCGTCTCCACTTTCCCATTCACCTCCACATATGCGCAGAGTCTTATCAACCTCTAATCAGCACGCATCAACTCCAAGTGCGCATGAAGAGATAGCTGAATCTTCTCAAGTTGCTCATCCTCCTACCTTAGAAGAGAACATTGGTGTAGCCCGGAAGAAACGACGTGGTGAGACTCGTGGTCTTGGGACAGCCAAGAAGAAATGTTGTAGTAATCAAATAGAGATTGATATTCCAGAGCATGTAAAACGAGCTGTAGGAGCGAATTGCCAGTCTTACATCACAGAGATAGGCTGCATTGTTAGGCAAAATGCTCCATTACAAGTTAAGCATTGGAGTGGAATTAGCAAGGATGATGTTGCTTCGATGGTTCGTCTTGTCCGTGAGAAATTCAAATTGGGGAATGAACCACACGTGAATGAGGCTATTGAGGCGGACATGAAAAGAAGATATAGCACTTGGCGATACAATTTGCATAAGACATTTTTGCAATATGAATCAGTGGAGGAGGCACTTGAGAATAGACCTGAAAATGTGGGAGAAGATGACTGGAATTTTCTCAGCAATTGTCGCATTAGATATGAAAATGGTGAGATGACAAAATTGAAAAATCCTGAGCAAACAAATGAAGAGTCAGAAAAAGCAATGTCTGATGATGAGATATATGATAAAGTTCTTTCCACAATTGTTGGTCCACCTCCGTTAGGCTACATACGTGGTTTAGGAGCAGGTCCTAAGCCTAAAAATTCAAAGGTCTCCAATAATCATTCACAACTTCGGGAGGCTACACGGAGGGCAGATGAGGCAGAGAGAAGATCTACCCAACTTGCAGAGGAGTTGGAGGCAATGAAGGCTAGTGCAGCTCAACAAAATGAAGAATTAGAGGTAGTGAAGGCTAGTGCAGCTCAACAAAATGAACAGTTAGAAGCAGTTAAAGCAAAGCAGAATGAGACGGACGCTCTTTTGAAAAAATTGCTGGAACAATTTTCCTCTAGGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

445

Amino Acids

49.84

Weight (kDa)

9.58

Isoelectric Point (pI)

57.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000178)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G40087 AT3G30200
fragaria_vesca FvH4_1g23271 FvH4_3g22812 FvH4_3g22813 FvH4_3g31042 FvH4_3g31043 FvH4_7g03653
malus_domestica MD05G1321200.v1.1 MD09G1027200.v1.1 MD15G1434900.v1.1 MD15G1435000.v1.1 MD15G1435100.v1.1
prunus_persica Prupe.1G578800_v2.0.a1 Prupe.1G578800_v2.0.a1 Prupe.1G578800_v2.0.a1 Prupe.2G062700_v2.0.a1 Prupe.5G033400_v2.0.a1 Prupe.7G022900_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1 Prupe.7G105300_v2.0.a1
pyrus_communis pycom03g07600 pycom03g11360 pycom05g02870 pycom111g02130 pycom15g38370 pycom15g38380
rosa_chinensis RchiOBHm_Chr1g0346371 RchiOBHm_Chr4g0402051 RchiOBHm_Chr4g0414991 RchiOBHm_Chr5g0051011 RchiOBHm_Chr5g0051181 RchiOBHm_Chr6g0273071 RchiOBHm_Chr7g0218301 RchiOBHm_Chr7g0241081
rosa_laevigata RLG00000007709 RLG00000008953 RLG00000012400 RLG00000012401 RLG00000013805 RLG00000014199 RLG00000014726 RLG00000017792 RLG00000017793 RLG00000018860 RLG00000020749 RLG00000030708 RLG00000033507
rosa_multiflora Rmu_co8373761.1_g000001 Rmu_sc0000028.1_g000023 Rmu_sc0000235.1_g000040 Rmu_sc0000293.1_g000017 Rmu_sc0000293.1_g000019 Rmu_sc0000651.1_g000012 Rmu_sc0000870.1_g000051 Rmu_sc0001167.1_g000031 Rmu_sc0001373.1_g000039 Rmu_sc0001861.1_g000055 Rmu_sc0001891.1_g000038 Rmu_sc0001909.1_g000015 Rmu_sc0002500.1_g000002 Rmu_sc0002868.1_g000036 Rmu_sc0002868.1_g000038 Rmu_sc0002868.1_g000039 Rmu_sc0003379.1_g000001 Rmu_sc0003778.1_g000005 Rmu_sc0003778.1_g000006 Rmu_sc0010475.1_g000011 Rmu_sc0015271.1_g000002 Rmu_sc0015271.1_g000003 Rmu_sc0017962.1_g000001 Rmu_sc0017962.1_g000003 Rmu_sc0022129.1_g000004 Rmu_sc0025694.1_g000003 Rmu_sc0025694.1_g000004
rosa_roxburghii Rroxscaffold_1G00031640 Rroxscaffold_1G00047620 Rroxscaffold_1G00047630 Rroxscaffold_1G00050560 Rroxscaffold_1G00050570 Rroxscaffold_1G00054800 Rroxscaffold_1G00055890 Rroxscaffold_2G00108230 Rroxscaffold_3G00240860 Rroxscaffold_4G00299670 Rroxscaffold_4G00299680 Rroxscaffold_4G00299690 Rroxscaffold_4G00306320 Rroxscaffold_4G00306340 Rroxscaffold_5G00341060 Rroxscaffold_5G00342000 Rroxscaffold_5G00355660 Rroxscaffold_5G00357170 Rroxscaffold_6G00399490 Rroxscaffold_6G00408400 Rroxscaffold_7G00189260 Rroxscaffold_7G00199620 Rroxscaffold_7G00215470
rosa_rugosa Rorug02G0117600 Rorug02G0117700 Rorug04G0116400 Rorug06G0103200
rosa_samantha Rh1AG062800 Rh1AG073700 Rh1CG091700 Rh1DG077600 Rh1DG077700 Rh1DG077800 Rh1DG117400 Rh1DG146300 Rh2BG193300 Rh2BG193400 Rh2BG265300 Rh2BG413400 Rh3CG365500 Rh4AG315400 Rh4BG323100 Rh4BG323200 Rh4CG071400 Rh4CG142500 Rh4CG203300 Rh4CG338300 Rh4DG079300 Rh4DG079400 Rh4DG217000 Rh4DG217100 Rh4DG217200 Rh4DG217300 Rh5AG128300 Rh5AG239900 Rh5AG465900 Rh5BG348600 Rh5BG387900 Rh5BG388000 Rh5CG181800 Rh5CG181900 Rh5CG271000 Rh5CG271100 Rh5DG127100 Rh5DG138400 Rh5DG168200 Rh5DG168300 Rh5DG361500 Rh5DG460400 Rh6AG045400 Rh6AG058600 Rh6BG275000 Rh6CG089700 Rh6DG182300 Rh6DG182400 Rh6DG207300 Rh6DG207400 Rh7BG374000 Rh7BG390600 Rh7BG390700 Rh7BG390800
rosa_wichuraiana Rw0G018690 Rw1G007320 Rw4G008510 Rw5G011510 Rw5G021830 Rw6G024150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 176
AarI CACCTGC 1 cut(s) 139
Acc16I TGCGCA 2 cut(s) 374, 420
Acc36I ACCTGC 3 cut(s) 139, 292, 1055
AccI GTMKAC 1 cut(s) 280
AciI CCGC 2 cut(s) 217, 770
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 4 cut(s) 26, 725, 889, 1081
AcvI CACGTG 1 cut(s) 751
AfiI CCNNNNNNNGG 1 cut(s) 1040
AflIII ACRYGT 2 cut(s) 328, 748
AgsI TTSAA 7 cut(s) 153, 207, 240, 730, 943, 1086, 1303
AhdI GACNNNNNGTC 1 cut(s) 516
AjiI CACGTC 1 cut(s) 503
AjuI GAANNNNNNNTTGG 4 cut(s) 462, 494, 716, 748
AluBI AGCT 4 cut(s) 434, 590, 1199, 1241
AluI AGCT 4 cut(s) 434, 590, 1199, 1241
Alw26I GTCTC 4 cut(s) 348, 503, 1096, 1280
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 3 cut(s) 630, 1196, 1238
ApoI RAATTY 4 cut(s) 26, 725, 889, 1081
ArsI GACNNNNNNTTYG 4 cut(s) 593, 625, 953, 985
Asp700I GAANNNNTTC 1 cut(s) 235
AspLEI GCGC 2 cut(s) 375, 421
AspS9I GGNCC 3 cut(s) 20, 1028, 1067
AsuC2I CCSGG 1 cut(s) 490
AsuHPI GGTGA 3 cut(s) 351, 518, 938
AvaII GGWCC 3 cut(s) 20, 1028, 1067
BalI TGGCCA 1 cut(s) 5
BauI CACGAG 1 cut(s) 513
BbrPI CACGTG 1 cut(s) 751
BbvI GCAGC 3 cut(s) 617, 1208, 1250
BccI CCATC 2 cut(s) 316, 697
BcnI CCSGG 1 cut(s) 490
BcoDI GTCTC 4 cut(s) 348, 503, 1096, 1280
BfaI CTAG 5 cut(s) 96, 228, 1191, 1233, 1329
BfmI CTRYAG 1 cut(s) 591
BfuAI ACCTGC 3 cut(s) 139, 292, 1055
BglII AGATCT 1 cut(s) 1151
BisI GCNGC 3 cut(s) 631, 1197, 1239
BlsI GCNGC 3 cut(s) 632, 1198, 1240
Bme1390I CCNGG 1 cut(s) 490
Bme18I GGWCC 3 cut(s) 20, 1028, 1067
BmeRI GACNNNNNGTC 1 cut(s) 516
BmgBI CACGTC 1 cut(s) 503
BmgT120I GGNCC 3 cut(s) 20, 1028, 1067
BmrFI CCNGG 1 cut(s) 490
BmsI GCATC 3 cut(s) 43, 86, 413
BplI GAGNNNNNCTC 2 cut(s) 328, 360
Bpu10I CCTNAGC 2 cut(s) 951, 1071
BpuEI CTTGAG 2 cut(s) 429, 872
BpuMI CCSGG 1 cut(s) 490
Bsa29I ATCGAT 1 cut(s) 262
BsaAI YACGTR 2 cut(s) 751, 1052
BsaI GGTCTC 1 cut(s) 1096
BsaXI ACNNNNNCTCC 2 cut(s) 295, 325
Bsc4I CCNNNNNNNGG 1 cut(s) 1040
Bse1I ACTGG 2 cut(s) 607, 890
Bse3DI GCAATG 4 cut(s) 140, 212, 987, 1188
BseCI ATCGAT 1 cut(s) 262
BseGI GGATG 3 cut(s) 271, 454, 694
BseLI CCNNNNNNNGG 1 cut(s) 1040
BseMI GCAATG 4 cut(s) 140, 212, 987, 1188
BseMII CTCAG 2 cut(s) 910, 942
BseNI ACTGG 2 cut(s) 607, 890
BseRI GAGGAG 3 cut(s) 303, 857, 1184
BseXI GCAGC 3 cut(s) 617, 1208, 1250
BsgI GTGCAG 2 cut(s) 1215, 1257
BshFI GGCC 1 cut(s) 5
BshVI ATCGAT 1 cut(s) 262
BsiSI CCGG 1 cut(s) 490
BslFI GGGAC 1 cut(s) 538
BslI CCNNNNNNNGG 1 cut(s) 1040
BsmAI GTCTC 4 cut(s) 348, 503, 1096, 1280
BsmBI CGTCTC 2 cut(s) 348, 1280
BsmFI GGGAC 1 cut(s) 538
BsmI GAATGC 1 cut(s) 235
BsnI GGCC 1 cut(s) 5
Bso31I GGTCTC 1 cut(s) 1096
Bsp143I GATC 4 cut(s) 11, 263, 338, 1151
BspACI CCGC 2 cut(s) 217, 770
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 2 cut(s) 909, 943
BspDI ATCGAT 1 cut(s) 262
BspMI ACCTGC 3 cut(s) 139, 292, 1055
BspTNI GGTCTC 1 cut(s) 1096
BsrDI GCAATG 4 cut(s) 140, 212, 987, 1188
BsrI ACTGG 2 cut(s) 607, 890
BssMI GATC 4 cut(s) 11, 263, 338, 1151
BssSI CACGAG 1 cut(s) 513
Bst2BI CACGAG 1 cut(s) 513
Bst4CI ACNGT 1 cut(s) 1257
Bst6I CTCTTC 3 cut(s) 420, 465, 960
BstAPI GCANNNNNTGC 1 cut(s) 40
BstBAI YACGTR 2 cut(s) 751, 1052
BstC8I GCNNGC 2 cut(s) 75, 402
BstDEI CTNAG 5 cut(s) 168, 466, 896, 951, 1071
BstENI CCTNNNNNAGG 1 cut(s) 1038
BstF5I GGATG 3 cut(s) 271, 454, 694
BstHHI GCGC 2 cut(s) 375, 421
BstKTI GATC 4 cut(s) 14, 266, 341, 1154
BstMAI GTCTC 4 cut(s) 348, 503, 1096, 1280
BstMBI GATC 4 cut(s) 11, 263, 338, 1151
BstMWI GCNNNNNNNGC 9 cut(s) 40, 596, 767, 906, 1139, 1187, 1196, 1238, 1271
BstNSI RCATGY 3 cut(s) 138, 332, 581
BstSCI CCNGG 1 cut(s) 488
BstSFI CTRYAG 1 cut(s) 591
BstV1I GCAGC 3 cut(s) 617, 1208, 1250
BstX2I RGATCY 1 cut(s) 1151
BstYI RGATCY 1 cut(s) 1151
Bsu15I ATCGAT 1 cut(s) 262
BsuRI GGCC 1 cut(s) 5
BsuTUI ATCGAT 1 cut(s) 262
BtrI CACGTC 1 cut(s) 503
BtsCI GGATG 3 cut(s) 271, 454, 694
BtsIMutI CAGTG 1 cut(s) 843
BveI ACCTGC 3 cut(s) 139, 292, 1055
Cac8I GCNNGC 2 cut(s) 75, 402
CfoI GCGC 2 cut(s) 375, 421
Cfr13I GGNCC 3 cut(s) 20, 1028, 1067
ClaI ATCGAT 1 cut(s) 262
CseI GACGC 1 cut(s) 1301
CspCI CAANNNNNGTGG 2 cut(s) 1006, 1041
CviAII CATG 5 cut(s) 135, 329, 422, 578, 775
DdeI CTNAG 5 cut(s) 168, 466, 896, 951, 1071
DpnI GATC 4 cut(s) 13, 265, 340, 1153
DpnII GATC 4 cut(s) 11, 263, 338, 1151
DriI GACNNNNNGTC 1 cut(s) 516
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 420, 465, 960
Eam1105I GACNNNNNGTC 1 cut(s) 516
EarI CTCTTC 3 cut(s) 420, 465, 960
EciI GGCGGA 1 cut(s) 785
Eco31I GGTCTC 1 cut(s) 1096
Eco47I GGWCC 3 cut(s) 20, 1028, 1067
Eco72I CACGTG 1 cut(s) 751
EcoNI CCTNNNNNAGG 1 cut(s) 1038
EcoO109I RGGNCCY 2 cut(s) 20, 1067
Esp3I CGTCTC 2 cut(s) 348, 1280
FaeI CATG 5 cut(s) 138, 332, 425, 581, 778
FaqI GGGAC 1 cut(s) 538
FatI CATG 5 cut(s) 134, 328, 421, 577, 774
FauNDI CATATG 1 cut(s) 369
FblI GTMKAC 1 cut(s) 280
Fnu4HI GCNGC 3 cut(s) 631, 1197, 1239
FokI GGATG 3 cut(s) 258, 441, 701
Fsp4HI GCNGC 3 cut(s) 631, 1197, 1239
FspAI RTGCGCAY 1 cut(s) 420
FspBI CTAG 5 cut(s) 96, 228, 1191, 1233, 1329
FspI TGCGCA 2 cut(s) 374, 420
GlaI GCGC 2 cut(s) 374, 420
GluI GCNGC 3 cut(s) 631, 1197, 1239
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 490
HgaI GACGC 1 cut(s) 1301
HhaI GCGC 2 cut(s) 375, 421
Hin1II CATG 5 cut(s) 138, 332, 425, 581, 778
Hin6I GCGC 2 cut(s) 373, 419
HinP1I GCGC 2 cut(s) 373, 419
HincII GTYRAC 1 cut(s) 281
HindII GTYRAC 1 cut(s) 281
HinfI GANTC 6 cut(s) 304, 378, 437, 511, 833, 968
HpaII CCGG 1 cut(s) 490
HphI GGTGA 3 cut(s) 351, 518, 938
Hpy166II GTNNAC 2 cut(s) 281, 1031
Hpy188I TCNGA 2 cut(s) 973, 988
Hpy188III TCNNGA 3 cut(s) 572, 950, 1115
Hpy8I GTNNAC 2 cut(s) 281, 1031
Hpy99I CGWCG 2 cut(s) 282, 504
HpyAV CCTTC 4 cut(s) 261, 327, 1180, 1222
HpyCH4III ACNGT 1 cut(s) 1257
HpyCH4IV ACGT 3 cut(s) 502, 750, 1051
HpyF10VI GCNNNNNNNGC 9 cut(s) 40, 596, 767, 906, 1139, 1187, 1196, 1238, 1271
HpyF3I CTNAG 5 cut(s) 168, 466, 896, 951, 1071
HpySE526I ACGT 3 cut(s) 502, 750, 1051
Hsp92II CATG 5 cut(s) 138, 332, 425, 581, 778
HspAI GCGC 2 cut(s) 373, 419
Kzo9I GATC 4 cut(s) 11, 263, 338, 1151
LmnI GCTCC 3 cut(s) 596, 655, 1061
Lsp1109I GCAGC 3 cut(s) 617, 1208, 1250
LweI GCATC 3 cut(s) 43, 86, 413
MaeI CTAG 5 cut(s) 96, 228, 1191, 1233, 1329
MaeII ACGT 3 cut(s) 502, 750, 1051
MalI GATC 4 cut(s) 13, 265, 340, 1153
MboI GATC 4 cut(s) 11, 263, 338, 1151
MfeI CAATTG 3 cut(s) 38, 901, 1020
MflI RGATCY 1 cut(s) 1151
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 4 cut(s) 298, 387, 505, 977
MmeI TCCRAC 1 cut(s) 1155
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 1 cut(s) 235
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 189, 663, 1269
MslI CAYNNNNRTG 3 cut(s) 133, 672, 753
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 1 cut(s) 490
MspR9I CCNGG 1 cut(s) 490
MunI CAATTG 3 cut(s) 38, 901, 1020
Mva1269I GAATGC 1 cut(s) 235
MwoI GCNNNNNNNGC 9 cut(s) 40, 596, 767, 906, 1139, 1187, 1196, 1238, 1271
NciI CCSGG 1 cut(s) 490
NdeI CATATG 1 cut(s) 369
NdeII GATC 4 cut(s) 11, 263, 338, 1151
NlaIII CATG 5 cut(s) 138, 332, 425, 581, 778
NsbI TGCGCA 2 cut(s) 374, 420
NspI RCATGY 3 cut(s) 138, 332, 581
PaqCI CACCTGC 1 cut(s) 139
PciI ACATGT 1 cut(s) 328
PcsI WCGNNNNNNNCGW 1 cut(s) 715
PctI GAATGC 1 cut(s) 235
PdmI GAANNNNTTC 1 cut(s) 235
PfeI GAWTC 2 cut(s) 437, 833
PkrI GCNGC 3 cut(s) 632, 1198, 1240
PleI GAGTC 4 cut(s) 298, 386, 505, 976
PmaCI CACGTG 1 cut(s) 751
PmlI CACGTG 1 cut(s) 751
PpsI GAGTC 4 cut(s) 298, 386, 505, 976
Ppu21I YACGTR 2 cut(s) 751, 1052
PpuMI RGGWCCY 2 cut(s) 20, 1067
PscI ACATGT 1 cut(s) 328
PsiI TTATAA 1 cut(s) 176
Psp5II RGGWCCY 2 cut(s) 20, 1067
PspCI CACGTG 1 cut(s) 751
PspPI GGNCC 3 cut(s) 20, 1028, 1067
PspPPI RGGWCCY 2 cut(s) 20, 1067
PsuI RGATCY 1 cut(s) 1151
RseI CAYNNNNRTG 3 cut(s) 133, 672, 753
SalI GTCGAC 1 cut(s) 279
SaqAI TTAA 3 cut(s) 189, 663, 1269
SatI GCNGC 3 cut(s) 631, 1197, 1239
Sau3AI GATC 4 cut(s) 11, 263, 338, 1151
Sau96I GGNCC 3 cut(s) 20, 1028, 1067
SchI GAGTC 4 cut(s) 298, 387, 505, 977
ScrFI CCNGG 1 cut(s) 490
SfaNI GCATC 3 cut(s) 43, 86, 413
SfcI CTRYAG 1 cut(s) 591
SinI GGWCC 3 cut(s) 20, 1028, 1067
SmiMI CAYNNNNRTG 3 cut(s) 133, 672, 753
SmlI CTYRAG 2 cut(s) 444, 851
SmoI CTYRAG 2 cut(s) 444, 851
SsiI CCGC 2 cut(s) 217, 770
SspMI CTAG 5 cut(s) 96, 228, 1191, 1233, 1329
StyD4I CCNGG 1 cut(s) 488
TaaI ACNGT 1 cut(s) 1257
TaiI ACGT 3 cut(s) 505, 753, 1054
TaqI TCGA 3 cut(s) 262, 280, 701
TfiI GAWTC 2 cut(s) 437, 833
Tru1I TTAA 3 cut(s) 189, 663, 1269
Tru9I TTAA 3 cut(s) 189, 663, 1269
TscAI CASTG 1 cut(s) 843
TseI GCWGC 3 cut(s) 630, 1196, 1238
TspDTI ATGAA 9 cut(s) 438, 756, 791, 846, 933, 978, 1199, 1224, 1266
TspGWI ACGGA 4 cut(s) 707, 1026, 1141, 1304
TspRI CASTG 1 cut(s) 843
VpaK11BI GGWCC 3 cut(s) 20, 1028, 1067
XagI CCTNNNNNAGG 1 cut(s) 1038
XapI RAATTY 4 cut(s) 26, 725, 889, 1081
XceI RCATGY 3 cut(s) 138, 332, 581
XmiI GTMKAC 1 cut(s) 280
XmnI GAANNNNTTC 1 cut(s) 235
XspI CTAG 5 cut(s) 96, 228, 1191, 1233, 1329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.