FvH4_5g16160

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000424
Physical Location & Seq
Forward (+)
9209123 .. 9211894
2772 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g16160.t1

Sequence Viewer

Length: 2355 bp
ATGGAAGGGAAACCTAAATCTGTGTTTATGGTGGCGCATTCCGATGACGGCTCATATAGTGCCCTATATGAGGTCAAAATCCAACCAGACGGAGAAGTTATAGCCATCGTAGGCGGAGGAGAAAGATCAAGTAAACGCAGCCAACTACTTGAGCCGGTGACCAAGTTGTTCGATGACAACGGTATTGTCATACCGGAGCATTCAAGCTTGGCAACTGCAAGGTTTTTTAGCCGTTCAAAATTATACCTATGGCTGAACCAAAGCGGTTCCGAATCGCATAACAAACAAATCACCTCCTATGGATATGTTTTGGACACGAAGACAAAGTCATTGATCCCATGCAAGTCACCTCAAGCACATAAGCCATCAGCAACTGTTATCTCCGCCTATGGTAAGCTTTATCTTCTTGCTAATCCAGAATGCTGGCCGGAGATCCCAACCCCTGCCTTTGAGCGATATGATCCCGCCACTAACTGTTGGGAATCCCTCCCTCCTTTTCCGGGTTATAATCACCGGAAAGATATCAAAATAATAGGTTATGCCGTCTGTTACAGATTTATTCTGATCACTACGGACCATCATCATAATAAGGATTTTCATTTCAATGTGACTAGAAAACAATGGGCTTTTGATGTGACCAGAAAACAATGGCATGAGGTCAAGGTGTGGCCGCCTACTCGCTCTCTCTGTACGAATGGTTCAGTCGGCCGGGGGAGGGCCGTGGTTGTAGGTGATACTATATATACCTTCAACTTTTCATGCAGTAGTATCGTAGCATTCAGCTTTTGGTGGGATTTAGATGATGATGGTGATGTTAGCTTCTATGTAAGCTCAGAATCCATTTTGAAAGGCTTGGAGACTAGGTTGGGAACAAGAGGAGAGAAAAAAGGGTCTTTGGTTCATTTGGGGAGCTTGGATTTTTGTCTAGTCCAAAATTTCAGACAACGTGGTAGAGTTGATCGTCAACAATTTTGTATCACCACGTTTCAGGTTGTAGTTGAAGAAGGAGGAAGGCATATCAAGACCTTACATTCAACTATTTGTGAAGTGGGGAATGTCATATGTTTGAGTTACTGCTTCACTCCAGATGTTGATGATATTGAACCCAAAGAAGAAGAGAGAGCGATCACTAAAATGTCCATGCGACAGAAAGAATTAGAAGAAACCAAGCAATTCAGCCTTTTCGGCACGTCAGACATCCCACAAGAGTTGATATTTGACATCCTTACAAGGCTATCAATCAAGGATTTGATAGGCCTCATGTGTGTTTCTAAAGCATGGAATGCTGCCATCCAAGACCCACAATTGGCCAAACTGCATCTACAGCTCTCCATGAAGACCATTCCCTCATTGGATCACAAATTTTATGTTCTTTCGTCTCAACATAAATTGATGTCAGGGGACTTTTATGCAGTGGCCTCGTTCAACAATTACAGAAAGTATAGACTAGTGACAGTAAATTATAGATCAGAACAGGTTCAGAAAAGAAATAGGATCGTAGGAAACTGTAATGGTTTGGTCTGCATTTGCGGTTCTAAGGATGCTGATAAACATGAAGAAGACTTTGGTTTGTGGAATCCGACGATTCAGAAATTCAAAAGGATACCCTTGTCAGCCTTCAGTAAGTTCACGCAGAAGAAAACCTTCTTCGGGTTTGGGTATGATTCAGTTAACCAGGATTATAAATTTGTGAGATTGGCACAGTTTGAGGATAGTGGTGTTGCTACAAGTTCAGAAGTGCAGGTCTATAGTCTAAACTCGCACTCATGGAAAAGGATCCAAGACTTGCCTGCTCATCTTAACAGAGATTTTGAACTTACCTCATCAGAAGGGGTTTGTGTTGACGGTGCTCTACATTGGTTAATGAGATTTCGTAATCATGAACGTGGAAGACGGATGATAGTTCTAACCCTTCATCTCACAACTGAAGAGTATAACTGGTTTTCTACTCCTGACTATAATCTTCCATGTCCTCCTGATTATACTCTTCCATGTCGCTGTGAATTTTCAGACCAAGACAAGCGTAAAAACAAATACCATCATGAGTTTTTGCAAGCTTTGGGAGGGTGCTTATATTTCCGATTCGATTGTCTGCTCCAGGAGTCTTGGATATTGAAGGAAAATGGAGTTGCGGAAACATGGACTAAGCTTGATTACGAGCTCGACCAGCCTTTGATGCCTTCGGAGTGTCGTGAAATGGTTTTTTTCTCACACCATGGGCATATAAATGAAGTAGTAGTGAAGAGTACTCCTCGCTACATGGACTGTTCGTATAGGTTTGACACGTTAATTACTTGTCAAACCCTTCATCTTCTTAGGAGGCGACCAGAGCTTCCTTGCAATTACTGTCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

785

Amino Acids

90.37

Weight (kDa)

7.72

Isoelectric Point (pI)

42.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 102 - 223 4.3e-09 Protein of unknown function (DUF1668)
F-box PF00646 398 - 436 1.7e-08 F-box domain
F-box-like PF12937 398 - 436 4.4e-08 F-box-like
FBA_3 PF08268 484 - 652 1.8e-17 F-box associated beta propeller domain
FBA_1 PF07734 492 - 649 7.7e-21 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000424)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32600 AT1G54640
fragaria_vesca FvH4_2g26290 FvH4_2g26290 FvH4_2g26300 FvH4_5g16160 FvH4_6g49561 FvH4_6g49581
malus_domestica MD02G1261500.v1.1 MD02G1290400.v1.1 MD02G1290700.v1.1 MD02G1290800.v1.1 MD05G1183700.v1.1 MD07G1058700.v1.1 MD07G1058900.v1.1 MD07G1059200.v1.1 MD08G1079300.v1.1 MD08G1079600.v1.1 MD16G1218300.v1.1 MD16G1218400.v1.1 MD16G1218600.v1.1 MD16G1218700.v1.1 MD17G1102900.v1.1
prunus_persica Prupe.1G024400_v2.0.a1 Prupe.1G024500_v2.0.a1 Prupe.1G024600_v2.0.a1 Prupe.1G024800_v2.0.a1 Prupe.1G025300_v2.0.a1 Prupe.1G025400_v2.0.a1 Prupe.1G556300_v2.0.a1 Prupe.3G094100_v2.0.a1 Prupe.3G094200_v2.0.a1
pyrus_communis pycom02g22350 pycom05g27240 pycom07g04530 pycom07g04540 pycom08g06570 pycom10g07370 pycom16g17130 pycom16g17140 pycom16g17150 pycom16g17160 pycom16g17180 pycom17g09720
rosa_chinensis RchiOBHm_Chr6g0294901 RchiOBHm_Chr7g0179991 RchiOBHm_Chr7g0180101 RchiOBHm_Chr7g0180241
rosa_laevigata RLG00000005281 RLG00000005282 RLG00000005293 RLG00000005304 RLG00000011829 RLG00000011831 RLG00000011832 RLG00000021887
rosa_multiflora Rmu_co8519977.1_g000001 Rmu_sc0008966.1_g000002 Rmu_sc0008966.1_g000003 Rmu_sc0008966.1_g000008 Rmu_sc0011963.1_g000010 Rmu_ssc0000119.1_g000012 Rmu_ssc0000119.1_g000032
rosa_roxburghii Rroxscaffold_2G00081970 Rroxscaffold_2G00081980 Rroxscaffold_3G00273030 Rroxscaffold_3G00273250 Rroxscaffold_7G00172880 Rroxscaffold_7G00172900
rosa_rugosa Rorug02G0541400 Rorug06G0429600
rosa_samantha Rh2AG613800 Rh2CG595200 Rh2CG595300 Rh6AG361300 Rh6BG368000 Rh6BG368100 Rh6BG368300 Rh6BG368500 Rh6BG368600 Rh6CG375200 Rh6CG375300 Rh7AG030100 Rh7AG031000 Rh7AG032000 Rh7BG029400 Rh7BG029500 Rh7BG032100 Rh7CG031100 Rh7CG032700 Rh7CG032800 Rh7CG033900 Rh7DG030400 Rh7DG032400
rosa_wichuraiana Rw7G002420 Rw7G002670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 507, 1683
Acc36I ACCTGC 1 cut(s) 1732
AciI CCGC 7 cut(s) 114, 264, 384, 465, 671, 1530, 2132
AclWI GGATC 7 cut(s) 328, 427, 455, 1362, 1502, 1771, 1784
AcoI YGGCCR 4 cut(s) 425, 668, 706, 1308
AcsI RAATTY 5 cut(s) 934, 1361, 1592, 1685, 2003
AcuI CTGAAG 2 cut(s) 1603, 1947
AfaI GTAC 2 cut(s) 691, 2248
AfiI CCNNNNNNNGG 5 cut(s) 70, 500, 715, 1306, 1650
AflIII ACRYGT 1 cut(s) 2283
AhlI ACTAGT 1 cut(s) 1447
AjiI CACGTC 1 cut(s) 1191
AjnI CCWGG 2 cut(s) 1674, 2097
AjuI GAANNNNNNNTTGG 2 cut(s) 1548, 1580
Alw21I GWGCWC 2 cut(s) 1852, 2163
Alw26I GTCTC 2 cut(s) 851, 1383
AlwI GGATC 7 cut(s) 328, 427, 455, 1362, 1502, 1771, 1784
AlwNI CAGNNNCTG 1 cut(s) 374
AoxI GGCC 7 cut(s) 425, 668, 706, 717, 1255, 1308, 1416
ApeKI GCWGC 2 cut(s) 138, 1286
ApoI RAATTY 5 cut(s) 934, 1361, 1592, 1685, 2003
ArsI GACNNNNNNTTYG 2 cut(s) 311, 343
Asp700I GAANNNNTTC 2 cut(s) 1476, 1643
AspLEI GCGC 1 cut(s) 37
AspS9I GGNCC 2 cut(s) 574, 717
AsuC2I CCSGG 2 cut(s) 501, 710
AsuHPI GGTGA 7 cut(s) 169, 283, 339, 503, 743, 821, 970
AvaII GGWCC 1 cut(s) 574
BaeGI GKGCMC 1 cut(s) 64
BaeI ACNNNNGTAYC 2 cut(s) 1595, 1628
BalI TGGCCA 1 cut(s) 1310
BamHI GGATCC 1 cut(s) 1776
BanII GRGCYC 1 cut(s) 2163
BbsI GAAGAC 4 cut(s) 326, 1343, 1566, 1897
Bbv12I GWGCWC 2 cut(s) 1852, 2163
BbvI GCAGC 2 cut(s) 150, 1273
BccI CCATC 6 cut(s) 113, 373, 585, 800, 1298, 2046
BceAI ACGGC 4 cut(s) 64, 216, 527, 704
BcgI CGANNNNNNTGC 4 cut(s) 751, 785, 1401, 1435
BciT130I CCWGG 2 cut(s) 1676, 2099
BciVI GTATCC 1 cut(s) 1596
BclI TGATCA 1 cut(s) 564
BcnI CCSGG 2 cut(s) 501, 710
BcoDI GTCTC 2 cut(s) 851, 1383
BcuI ACTAGT 1 cut(s) 1447
BfaI CTAG 4 cut(s) 612, 861, 926, 1448
BfmI CTRYAG 2 cut(s) 1322, 1747
BfuAI ACCTGC 1 cut(s) 1732
BfuI GTATCC 1 cut(s) 1596
BglI GCCNNNNNGGC 1 cut(s) 1185
BisI GCNGC 3 cut(s) 139, 671, 1287
BlsI GCNGC 3 cut(s) 140, 672, 1288
BmcAI AGTACT 1 cut(s) 2248
Bme1390I CCNGG 4 cut(s) 501, 710, 1676, 2099
Bme18I GGWCC 1 cut(s) 574
BmgBI CACGTC 1 cut(s) 1191
BmgT120I GGNCC 2 cut(s) 574, 717
BmiI GGNNCC 2 cut(s) 268, 1778
BmrFI CCNGG 4 cut(s) 501, 710, 1676, 2099
BmsI GCATC 3 cut(s) 1327, 1531, 2166
BpiI GAAGAC 4 cut(s) 326, 1343, 1566, 1897
BplI GAGNNNNNCTC 2 cut(s) 2236, 2268
BpmI CTGGAG 2 cut(s) 1068, 2081
BpuEI CTTGAG 2 cut(s) 170, 336
BpuMI CCSGG 2 cut(s) 501, 710
BsaJI CCNNGG 3 cut(s) 709, 720, 2215
BsaWI WCCGGW 2 cut(s) 193, 513
BsaXI ACNNNNNCTCC 2 cut(s) 848, 878
Bsc4I CCNNNNNNNGG 5 cut(s) 70, 500, 715, 1306, 1650
Bse118I RCCGGY 1 cut(s) 154
Bse1I ACTGG 1 cut(s) 1943
BseBI CCWGG 2 cut(s) 1676, 2099
BseDI CCNNGG 3 cut(s) 709, 720, 2215
BseGI GGATG 5 cut(s) 1197, 1221, 1290, 1546, 1902
BseLI CCNNNNNNNGG 5 cut(s) 70, 500, 715, 1306, 1650
BseMII CTCAG 1 cut(s) 846
BseNI ACTGG 1 cut(s) 1943
BseRI GAGGAG 3 cut(s) 132, 891, 2241
BseSI GKGCMC 1 cut(s) 64
BseX3I CGGCCG 1 cut(s) 706
BseXI GCAGC 2 cut(s) 150, 1273
BsgI GTGCAG 1 cut(s) 1760
Bsh1285I CGRYCG 1 cut(s) 709
BshFI GGCC 7 cut(s) 427, 670, 708, 719, 1257, 1310, 1418
BsiEI CGRYCG 1 cut(s) 709
BsiHKAI GWGCWC 2 cut(s) 1852, 2163
BsiSI CCGG 6 cut(s) 155, 194, 428, 500, 514, 709
BslFI GGGAC 1 cut(s) 1415
BslI CCNNNNNNNGG 5 cut(s) 70, 500, 715, 1306, 1650
BsmAI GTCTC 2 cut(s) 851, 1383
BsmBI CGTCTC 1 cut(s) 1383
BsmFI GGGAC 1 cut(s) 1415
BsmI GAATGC 5 cut(s) 37, 199, 425, 776, 1288
BsnI GGCC 7 cut(s) 427, 670, 708, 719, 1257, 1310, 1418
Bsp1286I GDGCHC 3 cut(s) 64, 1852, 2163
Bsp19I CCATGG 1 cut(s) 2215
BspACI CCGC 7 cut(s) 114, 264, 384, 465, 671, 1530, 2132
BspANI GGCC 7 cut(s) 427, 670, 708, 719, 1257, 1310, 1418
BspCNI CTCAG 1 cut(s) 845
BspHI TCATGA 2 cut(s) 1879, 2041
BspLI GGNNCC 2 cut(s) 268, 1778
BspMI ACCTGC 1 cut(s) 1732
BspPI GGATC 7 cut(s) 328, 427, 455, 1362, 1502, 1771, 1784
BsrFI RCCGGY 1 cut(s) 154
BsrI ACTGG 1 cut(s) 1943
BssAI RCCGGY 1 cut(s) 154
BssECI CCNNGG 3 cut(s) 709, 720, 2215
BssT1I CCWWGG 1 cut(s) 2215
Bst2UI CCWGG 2 cut(s) 1676, 2099
Bst4CI ACNGT 9 cut(s) 182, 376, 476, 1456, 1508, 1704, 1847, 2267, 2348
Bst6I CTCTTC 4 cut(s) 1110, 1923, 1992, 2237
BstAPI GCANNNNNTGC 1 cut(s) 1283
BstC8I GCNNGC 3 cut(s) 425, 1791, 2055
BstDEI CTNAG 4 cut(s) 832, 1536, 2145, 2315
BstDSI CCRYGG 2 cut(s) 720, 2215
BstEII GGTNACC 1 cut(s) 157
BstENI CCTNNNNNAGG 1 cut(s) 68
BstF5I GGATG 5 cut(s) 1197, 1221, 1290, 1546, 1902
BstHHI GCGC 1 cut(s) 37
BstMAI GTCTC 2 cut(s) 851, 1383
BstMCI CGRYCG 1 cut(s) 709
BstMWI GCNNNNNNNGC 6 cut(s) 1185, 1283, 1324, 2167, 2176, 2329
BstNI CCWGG 2 cut(s) 1676, 2099
BstPI GGTNACC 1 cut(s) 157
BstSCI CCNGG 4 cut(s) 499, 708, 1674, 2097
BstSFI CTRYAG 2 cut(s) 1322, 1747
BstSLI GKGCMC 1 cut(s) 64
BstV1I GCAGC 2 cut(s) 150, 1273
BstV2I GAAGAC 4 cut(s) 326, 1343, 1566, 1897
BstX2I RGATCY 2 cut(s) 432, 1776
BstXI CCANNNNNNTGG 1 cut(s) 423
BstYI RGATCY 2 cut(s) 432, 1776
BstZI CGGCCG 1 cut(s) 706
BsuI GTATCC 1 cut(s) 1596
BsuRI GGCC 7 cut(s) 427, 670, 708, 719, 1257, 1310, 1418
BtgI CCRYGG 2 cut(s) 720, 2215
BtrI CACGTC 1 cut(s) 1191
BtsCI GGATG 5 cut(s) 1197, 1221, 1290, 1546, 1902
BtsI GCAGTG 1 cut(s) 1419
BtsIMutI CAGTG 1 cut(s) 1419
BveI ACCTGC 1 cut(s) 1732
Cac8I GCNNGC 3 cut(s) 425, 1791, 2055
CaiI CAGNNNCTG 1 cut(s) 374
CciI TCATGA 2 cut(s) 1879, 2041
CfoI GCGC 1 cut(s) 37
Cfr10I RCCGGY 1 cut(s) 154
Cfr13I GGNCC 2 cut(s) 574, 717
Csp6I GTAC 2 cut(s) 690, 2247
CspCI CAANNNNNGTGG 2 cut(s) 1191, 1226
CviQI GTAC 2 cut(s) 690, 2247
DdeI CTNAG 4 cut(s) 832, 1536, 2145, 2315
EaeI YGGCCR 4 cut(s) 425, 668, 706, 1308
EagI CGGCCG 1 cut(s) 706
Eam1104I CTCTTC 4 cut(s) 1110, 1923, 1992, 2237
EarI CTCTTC 4 cut(s) 1110, 1923, 1992, 2237
EciI GGCGGA 2 cut(s) 129, 373
Ecl136II GAGCTC 1 cut(s) 2161
EclXI CGGCCG 1 cut(s) 706
Eco130I CCWWGG 1 cut(s) 2215
Eco147I AGGCCT 1 cut(s) 1257
Eco24I GRGCYC 1 cut(s) 2163
Eco32I GATATC 1 cut(s) 523
Eco47I GGWCC 1 cut(s) 574
Eco52I CGGCCG 1 cut(s) 706
Eco53kI GAGCTC 1 cut(s) 2161
Eco57I CTGAAG 2 cut(s) 1603, 1947
Eco91I GGTNACC 1 cut(s) 157
EcoICRI GAGCTC 1 cut(s) 2161
EcoNI CCTNNNNNAGG 1 cut(s) 68
EcoO65I GGTNACC 1 cut(s) 157
EcoRII CCWGG 2 cut(s) 1674, 2097
EcoRV GATATC 1 cut(s) 523
EcoT14I CCWWGG 1 cut(s) 2215
EcoT38I GRGCYC 1 cut(s) 2163
ErhI CCWWGG 1 cut(s) 2215
Esp3I CGTCTC 1 cut(s) 1383
FalI AAGNNNNNCTT 2 cut(s) 1628, 1660
FaqI GGGAC 1 cut(s) 1415
FauI CCCGC 1 cut(s) 472
FauNDI CATATG 1 cut(s) 1061
FbaI TGATCA 1 cut(s) 564
Fnu4HI GCNGC 3 cut(s) 139, 671, 1287
FokI GGATG 5 cut(s) 1184, 1208, 1277, 1553, 1909
FriOI GRGCYC 1 cut(s) 2163
Fsp4HI GCNGC 3 cut(s) 139, 671, 1287
FspBI CTAG 4 cut(s) 612, 861, 926, 1448
GlaI GCGC 1 cut(s) 36
GluI GCNGC 3 cut(s) 139, 671, 1287
GsuI CTGGAG 2 cut(s) 1068, 2081
HaeIII GGCC 7 cut(s) 427, 670, 708, 719, 1257, 1310, 1418
HapII CCGG 6 cut(s) 155, 194, 428, 500, 514, 709
HhaI GCGC 1 cut(s) 37
Hin6I GCGC 1 cut(s) 35
HinP1I GCGC 1 cut(s) 35
HincII GTYRAC 3 cut(s) 965, 1672, 1843
HindII GTYRAC 3 cut(s) 965, 1672, 1843
HindIII AAGCTT 4 cut(s) 205, 395, 2055, 2147
HinfI GANTC 8 cut(s) 272, 482, 836, 1576, 1585, 1664, 2082, 2102
HpaI GTTAAC 1 cut(s) 1672
HpaII CCGG 6 cut(s) 155, 194, 428, 500, 514, 709
HphI GGTGA 7 cut(s) 169, 283, 339, 503, 743, 821, 970
Hpy166II GTNNAC 5 cut(s) 134, 965, 1629, 1672, 1843
Hpy188III TCNNGA 8 cut(s) 416, 1021, 1085, 1880, 1952, 1976, 2042, 2192
Hpy8I GTNNAC 5 cut(s) 134, 965, 1629, 1672, 1843
Hpy99I CGWCG 1 cut(s) 1585
HpyCH4III ACNGT 9 cut(s) 182, 376, 476, 1456, 1508, 1704, 1847, 2267, 2348
HpyCH4IV ACGT 5 cut(s) 946, 983, 1190, 1885, 2285
HpyCH4V TGCA 9 cut(s) 218, 342, 762, 1318, 1412, 1524, 1741, 2053, 2340
HpyF10VI GCNNNNNNNGC 6 cut(s) 1185, 1283, 1324, 2167, 2176, 2329
HpyF3I CTNAG 4 cut(s) 832, 1536, 2145, 2315
HpySE526I ACGT 5 cut(s) 946, 983, 1190, 1885, 2285
HspAI GCGC 1 cut(s) 35
Ksp22I TGATCA 1 cut(s) 564
KspAI GTTAAC 1 cut(s) 1672
LmnI GCTCC 3 cut(s) 196, 909, 2100
Lsp1109I GCAGC 2 cut(s) 150, 1273
LweI GCATC 3 cut(s) 1327, 1531, 2166
MaeI CTAG 4 cut(s) 612, 861, 926, 1448
MaeII ACGT 5 cut(s) 946, 983, 1190, 1885, 2285
MaeIII GTNAC 8 cut(s) 157, 345, 548, 607, 634, 1070, 1450, 2348
MfeI CAATTG 1 cut(s) 1304
MflI RGATCY 2 cut(s) 432, 1776
MhlI GDGCHC 3 cut(s) 64, 1852, 2163
MlsI TGGCCA 1 cut(s) 1310
MluNI TGGCCA 1 cut(s) 1310
MlyI GAGTC 1 cut(s) 2111
MmeI TCCRAC 2 cut(s) 106, 1604
Mox20I TGGCCA 1 cut(s) 1310
MroXI GAANNNNTTC 2 cut(s) 1476, 1643
MscI TGGCCA 1 cut(s) 1310
MseI TTAA 4 cut(s) 1671, 1800, 1862, 2288
MslI CAYNNNNRTG 5 cut(s) 42, 603, 1133, 1884, 2226
Msp20I TGGCCA 1 cut(s) 1310
MspI CCGG 6 cut(s) 155, 194, 428, 500, 514, 709
MspR9I CCNGG 4 cut(s) 501, 710, 1676, 2099
MunI CAATTG 1 cut(s) 1304
Mva1269I GAATGC 5 cut(s) 37, 199, 425, 776, 1288
MvaI CCWGG 2 cut(s) 1676, 2099
MwoI GCNNNNNNNGC 6 cut(s) 1185, 1283, 1324, 2167, 2176, 2329
NciI CCSGG 2 cut(s) 501, 710
NcoI CCATGG 1 cut(s) 2215
NdeI CATATG 1 cut(s) 1061
NlaIV GGNNCC 2 cut(s) 268, 1778
NmuCI GTSAC 6 cut(s) 157, 345, 607, 634, 1450, 2348
PagI TCATGA 2 cut(s) 1879, 2041
PceI AGGCCT 1 cut(s) 1257
PctI GAATGC 5 cut(s) 37, 199, 425, 776, 1288
PdmI GAANNNNTTC 2 cut(s) 1476, 1643
PfeI GAWTC 7 cut(s) 272, 482, 836, 1576, 1585, 1664, 2082
PflFI GACNNNGTC 1 cut(s) 325
PfoI TCCNGGA 1 cut(s) 2097
PkrI GCNGC 3 cut(s) 140, 672, 1288
PleI GAGTC 1 cut(s) 2110
PpsI GAGTC 1 cut(s) 2110
PsiI TTATAA 2 cut(s) 507, 1683
Psp124BI GAGCTC 1 cut(s) 2163
Psp6I CCWGG 2 cut(s) 1674, 2097
PspEI GGTNACC 1 cut(s) 157
PspGI CCWGG 2 cut(s) 1674, 2097
PspN4I GGNNCC 2 cut(s) 268, 1778
PspPI GGNCC 2 cut(s) 574, 717
PsrI GAACNNNNNNTAC 2 cut(s) 682, 714
PstNI CAGNNNCTG 1 cut(s) 374
PsuI RGATCY 2 cut(s) 432, 1776
PsyI GACNNNGTC 1 cut(s) 325
RsaI GTAC 2 cut(s) 691, 2248
RsaNI GTAC 2 cut(s) 690, 2247
RseI CAYNNNNRTG 5 cut(s) 42, 603, 1133, 1884, 2226
SacI GAGCTC 1 cut(s) 2163
SaqAI TTAA 4 cut(s) 1671, 1800, 1862, 2288
SatI GCNGC 3 cut(s) 139, 671, 1287
Sau96I GGNCC 2 cut(s) 574, 717
ScaI AGTACT 1 cut(s) 2248
SchI GAGTC 1 cut(s) 2111
ScrFI CCNGG 4 cut(s) 501, 710, 1676, 2099
SduI GDGCHC 3 cut(s) 64, 1852, 2163
SfaNI GCATC 3 cut(s) 1327, 1531, 2166
SfcI CTRYAG 2 cut(s) 1322, 1747
SinI GGWCC 1 cut(s) 574
SmiMI CAYNNNNRTG 5 cut(s) 42, 603, 1133, 1884, 2226
SmlI CTYRAG 2 cut(s) 149, 351
SmoI CTYRAG 2 cut(s) 149, 351
SpeI ACTAGT 1 cut(s) 1447
SseBI AGGCCT 1 cut(s) 1257
SsiI CCGC 7 cut(s) 114, 264, 384, 465, 671, 1530, 2132
SspMI CTAG 4 cut(s) 612, 861, 926, 1448
SstI GAGCTC 1 cut(s) 2163
StuI AGGCCT 1 cut(s) 1257
StyD4I CCNGG 4 cut(s) 499, 708, 1674, 2097
StyI CCWWGG 1 cut(s) 2215
TaaI ACNGT 9 cut(s) 182, 376, 476, 1456, 1508, 1704, 1847, 2267, 2348
TaiI ACGT 5 cut(s) 949, 986, 1193, 1888, 2288
TaqI TCGA 3 cut(s) 171, 2085, 2163
TatI WGTACW 1 cut(s) 2246
TauI GCSGC 1 cut(s) 673
TfiI GAWTC 7 cut(s) 272, 482, 836, 1576, 1585, 1664, 2082
Tru1I TTAA 4 cut(s) 1671, 1800, 1862, 2288
Tru9I TTAA 4 cut(s) 1671, 1800, 1862, 2288
TscAI CASTG 1 cut(s) 1419
TseFI GTSAC 6 cut(s) 157, 345, 607, 634, 1450, 2348
TseI GCWGC 2 cut(s) 138, 1286
Tsp45I GTSAC 6 cut(s) 157, 345, 607, 634, 1450, 2348
TspDTI ATGAA 9 cut(s) 587, 747, 890, 1349, 1569, 1896, 1904, 2244, 2297
TspGWI ACGGA 3 cut(s) 105, 587, 1909
TspRI CASTG 1 cut(s) 1419
Tth111I GACNNNGTC 1 cut(s) 325
VpaK11BI GGWCC 1 cut(s) 574
XagI CCTNNNNNAGG 1 cut(s) 68
XapI RAATTY 5 cut(s) 934, 1361, 1592, 1685, 2003
XcmI CCANNNNNNNNNTGG 1 cut(s) 1348
XmnI GAANNNNTTC 2 cut(s) 1476, 1643
XspI CTAG 4 cut(s) 612, 861, 926, 1448
ZrmI AGTACT 1 cut(s) 2248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.