RchiOBHm_Chr7g0179991

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000424
Physical Location & Seq
Reverse (-)
2076800 .. 2079202
2403 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16046

Sequence Viewer

Length: 2403 bp
ATGGTGGCGCATTCTGATGACGGCTCATATAGTGCCCTATATGAAGTGAAAATCCAACCTGGAGGAGAAGTTATAGGCGTCGTAGGCGGAGGAGGAAGATTAGCAGCAACTCATAAAAAACGCCGCCAGCTACTTGAGCCGGTGGTCAAGTTGTTTGATGACAAAGGTATAGTGGTACCGGAGCATTCAAACTTGGCAACTGCAAGGTTCTTCAGCCGCTCCAAGTTATACCTATGGCTAAACGAAAGCAATTCTAAAATGCATAACAAAGAGACCACTACCAACTCAACATCCGCACTCTGCTATGGATATGTTTTGGACACGGAGGCGAAGTCATTGGTCCCATTCAAGTCACCTCAAGCACATAAGCCATCAGCAACTGTTATTTCCGCCTTTGGTAAGCTTTATCTTCTTGCGAATCCAGAATGCTGGCCGGAGATCCCAACCCCGGCCTTTGAGCGATATGATCCTGCTACTAATTGTTGGGAATCCCTCCCTCCTTTTCCAGGTTATAATCACCGGAAAGAGATTAGAATAATAGGTTATGCCGTCTGTTCCAGTTTTATTCTGTTCACAGCAGACCACCATAAGGAATACGTGGCATTCAATGTGACCAGAAAACAATGGGCTTTTGATGTGACCAGAAAACAATGGCATAAAGTCAAAGTGTGGCCGCCTACTCAATATCGTTTAACGAATGGTTCAGTCGGCCGGGGGAGGGCCGTGGTTTTAGGTGATACTATCTATACCTTTAACTATTCATGTAGTAGTGTAGTGGCATTCAACTTTTGGTGGGATTTAGATGAGGATGGTGATGTTACTTTCTATGTAAGCCCAGAATCCGTTTTGAAAGGCTTGGAGATTAGGTTGGGGACAAAAGGAAAGAAAGAAGGGTATTTGGTTCATTTGGGGAACTTGGATTTTTGTCTTGTCCAAAATTTCTTCCAACGTAGTAGAACTGGTCGTCAAGAATTTTGCATCACCAGGTTTCAGGTTGTGGTCGAAGGAGGAGGAAGGCATATCAAGACCTTACATTCAACTATTTGTGAAGTGGACACCCCCGACTCTAATTTCATTTGTTTAAGTTACTGCTTGACTGCCGATGTTGATGATATTGAACCCAAAGAAGAAGAGAGAGTGATCACTACTAGGTCCATGCAACAGGAAGAACAAGGTGTTGTTTCAACAAATGAATTAGAAGAAACAAAGCAATGCAGCCTTTTCGGCACATCAGACATCCCACAAGAGTTGATCTTTGATATCCTTGCAAGGCTGTCAACCAAAGATTTGATTAGACTCACGTGCGTTTCTAAAGCATGGAATGCTGCCATCCAAGACCCACAATTGGCCAAACTGCATCTCCATCTCTCCATCAAGATCATCAACTCTTTGGATCCCACCTTTTATATTCTTTCATCTGCACATCTATCAGATCATGACTTTTATCCAGTGGCCTTGTTCAACAATAACACAAAGGGTAGAGTTGTGAAAGTTAAGCATCGATCAAAACAGGTTCAGCAAAGAGCAAACATCTTAGGTTACTGTAATGGTTTGCTTTGCATTTCTGGATGGTCTAGGGATGTCAATGAATATGAAGACTTTGGTTTGTGGAATCCAACAATACAAAAGTTCAAGAAGATTCCCTTGTCAGCCTTCAGTAAATTCACGAAGAGGGAAACCTTTTATGGATTAGGGTATGATTCAGTTAACGACGATTATAAATTTGTGCGATTGGCACAGTTTGAGGATCATCATCGGAGTGGTGTTGTTACAAGTTCGGAAGTGCAGGTCTACAGTCTAAAATCGCACTCATGGAAAAGGATCCAAGACTTGCCTGCTCATCTTAACAAAGATTTTGAACTTGCCTCTATAGGGGTTTGTGTTGACGGTGCTTTACATTGGTTGATGAGATTACGTGGTGAAAGTGTAAGAGGGATGATAGTTCTAACCCTTCATCTCACAACTGAAGAGTATCACTGGTTTTCTACCCCTGATTATAATTATCCATGTCGCTGTGCAAATTCAAAGGACGAGCGTAAAAACAGGCACTGTTTGTTTTTGCAAGTTTTGGGAGGGTGCTTATGTTTTCGATTCCAATGTGATCTCCTGGATGCTTGGATTTTGAAGGAAAATGGAGTTGCCGAATCATGGACTAAACTTTATTCTACCAAGGAATTGCCCGAGTTATTTTCCTGCCAGCCGTTGATGCTTTCTGAGTGTGGTAAAATGGTTCTTTTCTCAAATCACTTCGGGAACACTTTCTGGTTTGATTTAGAGAATAAGAAACGTAAAGCGGTGGCCAGACCTGATGAGCGTATTTTTGGCTTTGACACGTTAATTACTTGTCAAACCCTTCATCTTCTTAGGAGGCGACCAGAGCTTCCTTGTAATTACTGTTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

800

Amino Acids

91.56

Weight (kDa)

8.14

Isoelectric Point (pI)

41.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 104 - 224 5e-09 Protein of unknown function (DUF1668)
F-box-like PF12937 411 - 449 2.4e-09 F-box-like
F-box PF00646 411 - 449 3e-09 F-box domain
FBA_1 PF07734 477 - 746 2.8e-23 F-box associated beta propeller domain
FBA_3 PF08268 496 - 719 2.3e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000424)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32600 AT1G54640
fragaria_vesca FvH4_2g26290 FvH4_2g26290 FvH4_2g26300 FvH4_5g16160 FvH4_6g49561 FvH4_6g49581
malus_domestica MD02G1261500.v1.1 MD02G1290400.v1.1 MD02G1290700.v1.1 MD02G1290800.v1.1 MD05G1183700.v1.1 MD07G1058700.v1.1 MD07G1058900.v1.1 MD07G1059200.v1.1 MD08G1079300.v1.1 MD08G1079600.v1.1 MD16G1218300.v1.1 MD16G1218400.v1.1 MD16G1218600.v1.1 MD16G1218700.v1.1 MD17G1102900.v1.1
prunus_persica Prupe.1G024400_v2.0.a1 Prupe.1G024500_v2.0.a1 Prupe.1G024600_v2.0.a1 Prupe.1G024800_v2.0.a1 Prupe.1G025300_v2.0.a1 Prupe.1G025400_v2.0.a1 Prupe.1G556300_v2.0.a1 Prupe.3G094100_v2.0.a1 Prupe.3G094200_v2.0.a1
pyrus_communis pycom02g22350 pycom05g27240 pycom07g04530 pycom07g04540 pycom08g06570 pycom10g07370 pycom16g17130 pycom16g17140 pycom16g17150 pycom16g17160 pycom16g17180 pycom17g09720
rosa_chinensis RchiOBHm_Chr6g0294901 RchiOBHm_Chr7g0179991 RchiOBHm_Chr7g0180101 RchiOBHm_Chr7g0180241
rosa_laevigata RLG00000005281 RLG00000005282 RLG00000005293 RLG00000005304 RLG00000011829 RLG00000011831 RLG00000011832 RLG00000021887
rosa_multiflora Rmu_co8519977.1_g000001 Rmu_sc0008966.1_g000002 Rmu_sc0008966.1_g000003 Rmu_sc0008966.1_g000008 Rmu_sc0011963.1_g000010 Rmu_ssc0000119.1_g000012 Rmu_ssc0000119.1_g000032
rosa_roxburghii Rroxscaffold_2G00081970 Rroxscaffold_2G00081980 Rroxscaffold_3G00273030 Rroxscaffold_3G00273250 Rroxscaffold_7G00172880 Rroxscaffold_7G00172900
rosa_rugosa Rorug02G0541400 Rorug06G0429600
rosa_samantha Rh2AG613800 Rh2CG595200 Rh2CG595300 Rh6AG361300 Rh6BG368000 Rh6BG368100 Rh6BG368300 Rh6BG368500 Rh6BG368600 Rh6CG375200 Rh6CG375300 Rh7AG030100 Rh7AG031000 Rh7AG032000 Rh7BG029400 Rh7BG029500 Rh7BG032100 Rh7CG031100 Rh7CG032700 Rh7CG032800 Rh7CG033900 Rh7DG030400 Rh7DG032400
rosa_wichuraiana Rw7G002420 Rw7G002670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 513, 1719, 1998
Acc36I ACCTGC 1 cut(s) 1777
Acc65I GGTACC 1 cut(s) 175
AccB1I GGYRCC 1 cut(s) 175
AccBSI CCGCTC 1 cut(s) 219
AccI GTMKAC 1 cut(s) 1791
AciI CCGC 7 cut(s) 87, 124, 217, 294, 390, 674, 2294
AclWI GGATC 7 cut(s) 433, 461, 1388, 1401, 1755, 1816, 1829
AcoI YGGCCR 5 cut(s) 431, 671, 709, 1347, 2298
AcsI RAATTY 5 cut(s) 937, 971, 1661, 1721, 2020
AcuI CTGAAG 3 cut(s) 196, 1639, 1986
AcvI CACGTG 1 cut(s) 1302
AcyI GRCGYC 1 cut(s) 78
AfaI GTAC 1 cut(s) 177
AfiI CCNNNNNNNGG 7 cut(s) 448, 506, 589, 718, 1345, 1872, 2148
AflIII ACRYGT 1 cut(s) 2331
AjnI CCWGG 4 cut(s) 58, 505, 983, 2106
AluBI AGCT 3 cut(s) 130, 403, 2380
AluI AGCT 3 cut(s) 130, 403, 2380
Alw26I GTCTC 1 cut(s) 266
AlwI GGATC 7 cut(s) 433, 461, 1388, 1401, 1755, 1816, 1829
AlwNI CAGNNNCTG 2 cut(s) 380, 2049
Ama87I CYCGRG 1 cut(s) 2180
AoxI GGCC 8 cut(s) 431, 450, 671, 709, 720, 1347, 1452, 2298
ApeKI GCWGC 3 cut(s) 104, 1215, 1325
ApoI RAATTY 5 cut(s) 937, 971, 1661, 1721, 2020
Asp700I GAANNNNTTC 1 cut(s) 2258
Asp718I GGTACC 1 cut(s) 175
AspLEI GCGC 1 cut(s) 10
AspS9I GGNCC 3 cut(s) 340, 720, 1152
AsuC2I CCSGG 2 cut(s) 449, 713
AsuHPI GGTGA 6 cut(s) 345, 509, 746, 824, 973, 1931
AvaI CYCGRG 1 cut(s) 2180
AvaII GGWCC 2 cut(s) 340, 1152
BaeGI GKGCMC 1 cut(s) 37
BalI TGGCCA 2 cut(s) 1349, 2300
BamHI GGATCC 2 cut(s) 1393, 1821
BanI GGYRCC 1 cut(s) 175
BbrPI CACGTG 1 cut(s) 1302
BbsI GAAGAC 1 cut(s) 1602
BbvI GCAGC 3 cut(s) 116, 1227, 1312
BccI CCATC 6 cut(s) 379, 803, 1337, 1371, 1379, 1563
BceAI ACGGC 4 cut(s) 37, 533, 707, 2185
BcgI CGANNNNNNTGC 2 cut(s) 1204, 1238
BciT130I CCWGG 4 cut(s) 60, 507, 985, 2108
BclI TGATCA 1 cut(s) 1140
BcnI CCSGG 2 cut(s) 449, 713
BcoDI GTCTC 1 cut(s) 266
BfaI CTAG 2 cut(s) 1149, 1575
BfmI CTRYAG 2 cut(s) 1792, 1869
BfuAI ACCTGC 1 cut(s) 1777
BglI GCCNNNNNGGC 1 cut(s) 1224
BisI GCNGC 6 cut(s) 105, 124, 217, 674, 1216, 1326
BlsI GCNGC 6 cut(s) 106, 125, 218, 675, 1217, 1327
Bme1390I CCNGG 6 cut(s) 60, 449, 507, 713, 985, 2108
Bme18I GGWCC 2 cut(s) 340, 1152
BmeT110I CYCGRG 1 cut(s) 2180
BmgT120I GGNCC 3 cut(s) 340, 720, 1152
BmiI GGNNCC 4 cut(s) 177, 342, 1395, 1823
BmrFI CCNGG 6 cut(s) 60, 449, 507, 713, 985, 2108
BmsI GCATC 5 cut(s) 987, 1366, 1507, 2101, 2196
BpiI GAAGAC 1 cut(s) 1602
BpmI CTGGAG 1 cut(s) 81
BpuEI CTTGAG 2 cut(s) 155, 342
BpuMI CCSGG 2 cut(s) 449, 713
Bsa29I ATCGAT 1 cut(s) 1501
BsaAI YACGTR 3 cut(s) 598, 1302, 1916
BsaBI GATNNNNATC 1 cut(s) 1752
BsaHI GRCGYC 1 cut(s) 78
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 4 cut(s) 447, 712, 723, 2169
BsaWI WCCGGW 2 cut(s) 178, 519
BsaXI ACNNNNNCTCC 8 cut(s) 54, 84, 317, 347, 851, 881, 1344, 1374
Bsc4I CCNNNNNNNGG 7 cut(s) 448, 506, 589, 718, 1345, 1872, 2148
Bse118I RCCGGY 1 cut(s) 139
Bse1I ACTGG 4 cut(s) 558, 964, 1448, 1982
Bse3DI GCAATG 1 cut(s) 1217
Bse8I GATNNNNATC 1 cut(s) 1752
BseBI CCWGG 4 cut(s) 60, 507, 985, 2108
BseCI ATCGAT 1 cut(s) 1501
BseDI CCNNGG 4 cut(s) 447, 712, 723, 2169
BseGI GGATG 8 cut(s) 290, 814, 1236, 1329, 1574, 1585, 1941, 2116
BseJI GATNNNNATC 1 cut(s) 1752
BseLI CCNNNNNNNGG 7 cut(s) 448, 506, 589, 718, 1345, 1872, 2148
BseMI GCAATG 1 cut(s) 1217
BseMII CTCAG 1 cut(s) 2205
BseNI ACTGG 4 cut(s) 558, 964, 1448, 1982
BseRI GAGGAG 3 cut(s) 78, 105, 1023
BseSI GKGCMC 1 cut(s) 37
BseX3I CGGCCG 1 cut(s) 709
BseXI GCAGC 3 cut(s) 116, 1227, 1312
BsgI GTGCAG 2 cut(s) 1404, 1805
Bsh1285I CGRYCG 1 cut(s) 712
BshFI GGCC 8 cut(s) 433, 452, 673, 711, 722, 1349, 1454, 2300
BshNI GGYRCC 1 cut(s) 175
BshVI ATCGAT 1 cut(s) 1501
BsiEI CGRYCG 1 cut(s) 712
BsiHKCI CYCGRG 1 cut(s) 2180
BsiSI CCGG 6 cut(s) 140, 179, 434, 449, 520, 712
BslFI GGGAC 2 cut(s) 326, 886
BslI CCNNNNNNNGG 7 cut(s) 448, 506, 589, 718, 1345, 1872, 2148
BsmAI GTCTC 1 cut(s) 266
BsmFI GGGAC 2 cut(s) 326, 886
BsmI GAATGC 6 cut(s) 10, 184, 431, 602, 779, 1327
BsnI GGCC 8 cut(s) 433, 452, 673, 711, 722, 1349, 1454, 2300
Bso31I GGTCTC 1 cut(s) 266
BsoBI CYCGRG 1 cut(s) 2180
Bsp1286I GDGCHC 1 cut(s) 37
BspACI CCGC 7 cut(s) 87, 124, 217, 294, 390, 674, 2294
BspANI GGCC 8 cut(s) 433, 452, 673, 711, 722, 1349, 1454, 2300
BspCNI CTCAG 1 cut(s) 2206
BspDI ATCGAT 1 cut(s) 1501
BspHI TCATGA 1 cut(s) 1435
BspLI GGNNCC 4 cut(s) 177, 342, 1395, 1823
BspMI ACCTGC 1 cut(s) 1777
BspPI GGATC 7 cut(s) 433, 461, 1388, 1401, 1755, 1816, 1829
BspT107I GGYRCC 1 cut(s) 175
BspTNI GGTCTC 1 cut(s) 266
BsrBI CCGCTC 1 cut(s) 219
BsrDI GCAATG 1 cut(s) 1217
BsrFI RCCGGY 1 cut(s) 139
BsrI ACTGG 4 cut(s) 558, 964, 1448, 1982
BssAI RCCGGY 1 cut(s) 139
BssECI CCNNGG 4 cut(s) 447, 712, 723, 2169
BssNI GRCGYC 1 cut(s) 78
BssT1I CCWWGG 1 cut(s) 2169
Bst2UI CCWGG 4 cut(s) 60, 507, 985, 2108
Bst4CI ACNGT 7 cut(s) 382, 1544, 1740, 1796, 1889, 2051, 2396
Bst6I CTCTTC 3 cut(s) 1125, 1664, 1962
BstACI GRCGYC 1 cut(s) 78
BstAPI GCANNNNNTGC 1 cut(s) 1322
BstBAI YACGTR 3 cut(s) 598, 1302, 1916
BstC8I GCNNGC 4 cut(s) 128, 431, 1836, 2198
BstDEI CTNAG 3 cut(s) 1534, 2214, 2363
BstDSI CCRYGG 1 cut(s) 723
BstENI CCTNNNNNAGG 1 cut(s) 504
BstF5I GGATG 8 cut(s) 290, 814, 1236, 1329, 1574, 1585, 1941, 2116
BstHHI GCGC 1 cut(s) 10
BstMAI GTCTC 1 cut(s) 266
BstMCI CGRYCG 1 cut(s) 712
BstMWI GCNNNNNNNGC 6 cut(s) 84, 136, 1224, 1322, 2206, 2377
BstNI CCWGG 4 cut(s) 60, 507, 985, 2108
BstSCI CCNGG 6 cut(s) 58, 447, 505, 711, 983, 2106
BstSFI CTRYAG 2 cut(s) 1792, 1869
BstSLI GKGCMC 1 cut(s) 37
BstV1I GCAGC 3 cut(s) 116, 1227, 1312
BstV2I GAAGAC 1 cut(s) 1602
BstX2I RGATCY 3 cut(s) 438, 1393, 1821
BstXI CCANNNNNNTGG 1 cut(s) 429
BstYI RGATCY 3 cut(s) 438, 1393, 1821
BstZI CGGCCG 1 cut(s) 709
Bsu15I ATCGAT 1 cut(s) 1501
BsuRI GGCC 8 cut(s) 433, 452, 673, 711, 722, 1349, 1454, 2300
BsuTUI ATCGAT 1 cut(s) 1501
BtgI CCRYGG 1 cut(s) 723
BtsCI GGATG 8 cut(s) 290, 814, 1236, 1329, 1574, 1585, 1941, 2116
BtsIMutI CAGTG 3 cut(s) 1455, 1975, 2047
BveI ACCTGC 1 cut(s) 1777
Cac8I GCNNGC 4 cut(s) 128, 431, 1836, 2198
CaiI CAGNNNCTG 2 cut(s) 380, 2049
CciI TCATGA 1 cut(s) 1435
CfoI GCGC 1 cut(s) 10
Cfr10I RCCGGY 1 cut(s) 139
Cfr13I GGNCC 3 cut(s) 340, 720, 1152
ClaI ATCGAT 1 cut(s) 1501
CseI GACGC 1 cut(s) 67
CsiI ACCWGGT 1 cut(s) 983
Csp6I GTAC 1 cut(s) 176
CspCI CAANNNNNGTGG 2 cut(s) 1230, 1265
CviAII CATG 7 cut(s) 762, 1156, 1317, 1436, 1812, 2007, 2148
CviQI GTAC 1 cut(s) 176
DdeI CTNAG 3 cut(s) 1534, 2214, 2363
EaeI YGGCCR 5 cut(s) 431, 671, 709, 1347, 2298
EagI CGGCCG 1 cut(s) 709
Eam1104I CTCTTC 3 cut(s) 1125, 1664, 1962
EarI CTCTTC 3 cut(s) 1125, 1664, 1962
EciI GGCGGA 2 cut(s) 102, 379
EclXI CGGCCG 1 cut(s) 709
Eco130I CCWWGG 1 cut(s) 2169
Eco31I GGTCTC 1 cut(s) 266
Eco32I GATATC 1 cut(s) 1261
Eco47I GGWCC 2 cut(s) 340, 1152
Eco52I CGGCCG 1 cut(s) 709
Eco57I CTGAAG 3 cut(s) 196, 1639, 1986
Eco72I CACGTG 1 cut(s) 1302
Eco88I CYCGRG 1 cut(s) 2180
EcoNI CCTNNNNNAGG 1 cut(s) 504
EcoRII CCWGG 4 cut(s) 58, 505, 983, 2106
EcoRV GATATC 1 cut(s) 1261
EcoT14I CCWWGG 1 cut(s) 2169
EcoT22I ATGCAT 1 cut(s) 264
ErhI CCWWGG 1 cut(s) 2169
FaeI CATG 7 cut(s) 765, 1159, 1320, 1439, 1815, 2010, 2151
FalI AAGNNNNNCTT 2 cut(s) 1628, 1660
FaqI GGGAC 2 cut(s) 326, 886
FatI CATG 7 cut(s) 761, 1155, 1316, 1435, 1811, 2006, 2147
FbaI TGATCA 1 cut(s) 1140
FblI GTMKAC 1 cut(s) 1791
Fnu4HI GCNGC 6 cut(s) 105, 124, 217, 674, 1216, 1326
FokI GGATG 8 cut(s) 277, 821, 1223, 1316, 1581, 1592, 1948, 2123
Fsp4HI GCNGC 6 cut(s) 105, 124, 217, 674, 1216, 1326
FspBI CTAG 2 cut(s) 1149, 1575
GlaI GCGC 1 cut(s) 9
GluI GCNGC 6 cut(s) 105, 124, 217, 674, 1216, 1326
GsuI CTGGAG 1 cut(s) 81
HaeIII GGCC 8 cut(s) 433, 452, 673, 711, 722, 1349, 1454, 2300
HapII CCGG 6 cut(s) 140, 179, 434, 449, 520, 712
HgaI GACGC 1 cut(s) 67
HhaI GCGC 1 cut(s) 10
Hin1I GRCGYC 1 cut(s) 78
Hin1II CATG 7 cut(s) 765, 1159, 1320, 1439, 1815, 2010, 2151
Hin6I GCGC 1 cut(s) 8
HinP1I GCGC 1 cut(s) 8
HincII GTYRAC 3 cut(s) 1278, 1708, 1885
HindII GTYRAC 3 cut(s) 1278, 1708, 1885
HindIII AAGCTT 1 cut(s) 401
HpaI GTTAAC 1 cut(s) 1708
HpaII CCGG 6 cut(s) 140, 179, 434, 449, 520, 712
HphI GGTGA 6 cut(s) 345, 509, 746, 824, 973, 1931
Hpy166II GTNNAC 6 cut(s) 573, 1054, 1278, 1708, 1792, 1885
Hpy188I TCNGA 6 cut(s) 16, 1234, 1432, 1758, 1780, 2215
Hpy188III TCNNGA 9 cut(s) 422, 968, 1024, 1375, 1436, 1566, 1633, 1666, 2251
Hpy8I GTNNAC 6 cut(s) 573, 1054, 1278, 1708, 1792, 1885
Hpy99I CGWCG 2 cut(s) 83, 1715
HpyAV CCTTC 7 cut(s) 884, 998, 1008, 1663, 1961, 2119, 2363
HpyCH4III ACNGT 7 cut(s) 382, 1544, 1740, 1796, 1889, 2051, 2396
HpyCH4IV ACGT 6 cut(s) 597, 949, 1301, 1915, 2287, 2333
HpyF10VI GCNNNNNNNGC 6 cut(s) 84, 136, 1224, 1322, 2206, 2377
HpyF3I CTNAG 3 cut(s) 1534, 2214, 2363
HpySE526I ACGT 6 cut(s) 597, 949, 1301, 1915, 2287, 2333
Hsp92I GRCGYC 1 cut(s) 78
Hsp92II CATG 7 cut(s) 765, 1159, 1320, 1439, 1815, 2010, 2151
HspAI GCGC 1 cut(s) 8
KpnI GGTACC 1 cut(s) 179
Ksp22I TGATCA 1 cut(s) 1140
KspAI GTTAAC 1 cut(s) 1708
LmnI GCTCC 2 cut(s) 181, 224
Lsp1109I GCAGC 3 cut(s) 116, 1227, 1312
LweI GCATC 5 cut(s) 987, 1366, 1507, 2101, 2196
MabI ACCWGGT 1 cut(s) 983
MaeI CTAG 2 cut(s) 1149, 1575
MaeII ACGT 6 cut(s) 597, 949, 1301, 1915, 2287, 2333
MaeIII GTNAC 8 cut(s) 351, 610, 637, 817, 1085, 1538, 1768, 2396
MbiI CCGCTC 1 cut(s) 219
MfeI CAATTG 1 cut(s) 1343
MflI RGATCY 3 cut(s) 438, 1393, 1821
MhlI GDGCHC 1 cut(s) 37
MlsI TGGCCA 2 cut(s) 1349, 2300
MluNI TGGCCA 2 cut(s) 1349, 2300
MlyI GAGTC 2 cut(s) 1058, 1290
MmeI TCCRAC 3 cut(s) 79, 970, 1640
Mox20I TGGCCA 2 cut(s) 1349, 2300
Mph1103I ATGCAT 1 cut(s) 264
MroXI GAANNNNTTC 1 cut(s) 2258
MscI TGGCCA 2 cut(s) 1349, 2300
MseI TTAA 7 cut(s) 692, 753, 1082, 1494, 1707, 1845, 2336
MslI CAYNNNNRTG 2 cut(s) 15, 1758
Msp20I TGGCCA 2 cut(s) 1349, 2300
MspI CCGG 6 cut(s) 140, 179, 434, 449, 520, 712
MspR9I CCNGG 6 cut(s) 60, 449, 507, 713, 985, 2108
MunI CAATTG 1 cut(s) 1343
Mva1269I GAATGC 6 cut(s) 10, 184, 431, 602, 779, 1327
MvaI CCWGG 4 cut(s) 60, 507, 985, 2108
MwoI GCNNNNNNNGC 6 cut(s) 84, 136, 1224, 1322, 2206, 2377
NciI CCSGG 2 cut(s) 449, 713
NlaIII CATG 7 cut(s) 765, 1159, 1320, 1439, 1815, 2010, 2151
NlaIV GGNNCC 4 cut(s) 177, 342, 1395, 1823
NmuCI GTSAC 3 cut(s) 351, 610, 637
NsiI ATGCAT 1 cut(s) 264
PagI TCATGA 1 cut(s) 1435
PctI GAATGC 6 cut(s) 10, 184, 431, 602, 779, 1327
PdmI GAANNNNTTC 1 cut(s) 2258
PfeI GAWTC 8 cut(s) 418, 488, 839, 1612, 1639, 1700, 2091, 2144
PfoI TCCNGGA 1 cut(s) 2106
PkrI GCNGC 6 cut(s) 106, 125, 218, 675, 1217, 1327
PleI GAGTC 2 cut(s) 1058, 1290
PmaCI CACGTG 1 cut(s) 1302
PmlI CACGTG 1 cut(s) 1302
PpsI GAGTC 2 cut(s) 1058, 1290
Ppu21I YACGTR 3 cut(s) 598, 1302, 1916
PsiI TTATAA 3 cut(s) 513, 1719, 1998
Psp6I CCWGG 4 cut(s) 58, 505, 983, 2106
PspCI CACGTG 1 cut(s) 1302
PspGI CCWGG 4 cut(s) 58, 505, 983, 2106
PspN4I GGNNCC 4 cut(s) 177, 342, 1395, 1823
PspPI GGNCC 3 cut(s) 340, 720, 1152
PstNI CAGNNNCTG 2 cut(s) 380, 2049
PsuI RGATCY 3 cut(s) 438, 1393, 1821
RsaI GTAC 1 cut(s) 177
RsaNI GTAC 1 cut(s) 176
RseI CAYNNNNRTG 2 cut(s) 15, 1758
SaqAI TTAA 7 cut(s) 692, 753, 1082, 1494, 1707, 1845, 2336
SatI GCNGC 6 cut(s) 105, 124, 217, 674, 1216, 1326
Sau96I GGNCC 3 cut(s) 340, 720, 1152
SchI GAGTC 2 cut(s) 1058, 1290
ScrFI CCNGG 6 cut(s) 60, 449, 507, 713, 985, 2108
SduI GDGCHC 1 cut(s) 37
SexAI ACCWGGT 1 cut(s) 983
SfaNI GCATC 5 cut(s) 987, 1366, 1507, 2101, 2196
SfcI CTRYAG 2 cut(s) 1792, 1869
SinI GGWCC 2 cut(s) 340, 1152
SmiMI CAYNNNNRTG 2 cut(s) 15, 1758
SmlI CTYRAG 2 cut(s) 134, 357
SmoI CTYRAG 2 cut(s) 134, 357
SsiI CCGC 7 cut(s) 87, 124, 217, 294, 390, 674, 2294
SspMI CTAG 2 cut(s) 1149, 1575
StyD4I CCNGG 6 cut(s) 58, 447, 505, 711, 983, 2106
StyI CCWWGG 1 cut(s) 2169
TaaI ACNGT 7 cut(s) 382, 1544, 1740, 1796, 1889, 2051, 2396
TaiI ACGT 6 cut(s) 600, 952, 1304, 1918, 2290, 2336
TaqI TCGA 3 cut(s) 1002, 1501, 2089
TauI GCSGC 3 cut(s) 126, 219, 676
TfiI GAWTC 8 cut(s) 418, 488, 839, 1612, 1639, 1700, 2091, 2144
Tru1I TTAA 7 cut(s) 692, 753, 1082, 1494, 1707, 1845, 2336
Tru9I TTAA 7 cut(s) 692, 753, 1082, 1494, 1707, 1845, 2336
TscAI CASTG 3 cut(s) 1455, 1982, 2054
TseFI GTSAC 3 cut(s) 351, 610, 637
TseI GCWGC 3 cut(s) 104, 1215, 1325
Tsp45I GTSAC 3 cut(s) 351, 610, 637
TspGWI ACGGA 2 cut(s) 338, 832
TspRI CASTG 3 cut(s) 1455, 1982, 2054
VpaK11BI GGWCC 2 cut(s) 340, 1152
XagI CCTNNNNNAGG 1 cut(s) 504
XapI RAATTY 5 cut(s) 937, 971, 1661, 1721, 2020
XmiI GTMKAC 1 cut(s) 1791
XmnI GAANNNNTTC 1 cut(s) 2258
XspI CTAG 2 cut(s) 1149, 1575
Zsp2I ATGCAT 1 cut(s) 264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.