Rh7AG030100

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000424
Physical Location & Seq
Reverse (-)
1977012 .. 1979441
2430 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG030100.1

Sequence Viewer

Length: 1815 bp
ATGGAAGGGAAACCTAAATCTGTTTTTATGGTGGCGCATTCTGATGACGGCTCATATAGTGCCCTATATGAAGTGAAAATCCAACCAGGAGGAGAAGTCATAGGCGTCGTAGGCGGAGGAGGAAGATTAGCAGCAACTCATAAAAAACGCCGCCAGCTACTTGAGCCGGTGGTCAAGTTGTTTGATGACAAAGGTATAGTGGTACCGGAGCATTCAAACTTGGCAACTGCAAGGTTCTTCAGCCGCTCCAAATTATACCTATGGCTGAACGAAAGCAATTCTAAAATGCATAACAAAGAGACCACTACCAACTCAACATCCGCACTCTGCTATGGATATGTTTTGGACACGGAGACGAAGTCATTGGTCCCATTCAAGTCACCTCAAGCACATAAGCCATCAGCAACTGTTATTTCCGCCTTTGGTAAGCTTTATCTTCTTGCGAATCCAGAATGCTGGCCGGAGATCCCAACCCCGGCCTTTGAGCGATATGATCCTGCCACTAATTGTTGGGAATCCCTCCCTCCTTTTCCAGGTTATAATCACCGGAAAGAGATTAGAATAATAGGTTATGCCGTCTGTTCCAGTTTTATTCTGTTCACAGCAGACCACCATAAGGAATACGTGGCATTCAATGTGACCAGAAAACAATGGGCTTTTGATGTGACCAGAAAACAATGGCATAAAGTCAAAGTGTGGCCGCCTACTCAATATCGTTTAACGAATGGTTCAGTCGGCCGGGGGAGGGCCGTGGTTTTAGGTGATACTATCTATACCTTTAACTATTCATGTAGTAGTGTAGTGGCATTCAACTTTTGGTGGGATTTAGATGAGGATGGTGATGTTACTTTCTATGTAAGCCCAGAATCCGTTTTGAAAGGCTTGGAGATTAGGTTGGGGACAAAAGGAAAGAAAGAAGGGTATTTGGTTCATTTGGGGAACTTGGATTTTTGTCTTGTCCAAAATTTCTTCCAACGTAGTAGAACTGGTCGTCAAGAATTTTGCATCACCAGGTTTCAGGTTGTGGTCGAAGGAGGAGGAAGGCATATCAAGACCTTACATTCAACTATTTGTGAAGTGGACACCCCCGACTCTAATTTCATTTGTTTAAGTTACTGCTTGACTGCAGATGTTGATGATATTGAACCCAAAGAAGAAGAGAGAGTGATCACTACTAGGTCCATGCAACAGGAAGAACAAGGTGTTGTTTCAACAAATGAATTAGAAGAAACAAAGCAATGCAGCCTTTTCGGCATATCAGACATCCCACAAGAGTTGATCTTTGATATCCTTGCAAGGCTGTCAACCAAAGATTTGATTAGACTCATGTGCGTTTCTAAAGCATGGAATGCTGCCATCCAAGACCCACAATTGGCCAAACTGCATCTCCATCTCTCCATCAAGATCATCAACTCTTTGGATCCCACCTTTTATATTCTTTCATCTGCACATCTATCAGATCATGACTTTTATCCAGTGGCCTTGTTCAACAATAACACAAGGGGTAGAGTTGTGAAAGTTAAGCATCGATCAAAACAGGAAAATGGAGTTGCCGAATCATGGACTAAACTTTATTCTACTAAGGAATTGCCCGAGTTATTTTCCTGCCAGCCGTTGATGCTTTCTGAGTGTGGTAAAATGGTTCTTTTCTCAAATCACTTCGGGAACACTTTCTGGTTTGATTTAGAGAATAAGAAACGAAAAGCGGTGGCCAGACCTGATGAGCGTGTTTTTGGCTTTGACACGTTAATTACTTGTCAAACCCTTCATCTTCTTAGGAGGCGACCAGAGCTTCCTTGTAATTACTGTTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

604

Amino Acids

68.79

Weight (kDa)

8.19

Isoelectric Point (pI)

43.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 113 - 233 1.2e-09 Protein of unknown function (DUF1668)
F-box PF00646 419 - 458 1e-10 F-box domain
F-box-like PF12937 419 - 458 4.1e-10 F-box-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000424)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32600 AT1G54640
fragaria_vesca FvH4_2g26290 FvH4_2g26290 FvH4_2g26300 FvH4_5g16160 FvH4_6g49561 FvH4_6g49581
malus_domestica MD02G1261500.v1.1 MD02G1290400.v1.1 MD02G1290700.v1.1 MD02G1290800.v1.1 MD05G1183700.v1.1 MD07G1058700.v1.1 MD07G1058900.v1.1 MD07G1059200.v1.1 MD08G1079300.v1.1 MD08G1079600.v1.1 MD16G1218300.v1.1 MD16G1218400.v1.1 MD16G1218600.v1.1 MD16G1218700.v1.1 MD17G1102900.v1.1
prunus_persica Prupe.1G024400_v2.0.a1 Prupe.1G024500_v2.0.a1 Prupe.1G024600_v2.0.a1 Prupe.1G024800_v2.0.a1 Prupe.1G025300_v2.0.a1 Prupe.1G025400_v2.0.a1 Prupe.1G556300_v2.0.a1 Prupe.3G094100_v2.0.a1 Prupe.3G094200_v2.0.a1
pyrus_communis pycom02g22350 pycom05g27240 pycom07g04530 pycom07g04540 pycom08g06570 pycom10g07370 pycom16g17130 pycom16g17140 pycom16g17150 pycom16g17160 pycom16g17180 pycom17g09720
rosa_chinensis RchiOBHm_Chr6g0294901 RchiOBHm_Chr7g0179991 RchiOBHm_Chr7g0180101 RchiOBHm_Chr7g0180241
rosa_laevigata RLG00000005281 RLG00000005282 RLG00000005293 RLG00000005304 RLG00000011829 RLG00000011831 RLG00000011832 RLG00000021887
rosa_multiflora Rmu_co8519977.1_g000001 Rmu_sc0008966.1_g000002 Rmu_sc0008966.1_g000003 Rmu_sc0008966.1_g000008 Rmu_sc0011963.1_g000010 Rmu_ssc0000119.1_g000012 Rmu_ssc0000119.1_g000032
rosa_roxburghii Rroxscaffold_2G00081970 Rroxscaffold_2G00081980 Rroxscaffold_3G00273030 Rroxscaffold_3G00273250 Rroxscaffold_7G00172880 Rroxscaffold_7G00172900
rosa_rugosa Rorug02G0541400 Rorug06G0429600
rosa_samantha Rh2AG613800 Rh2CG595200 Rh2CG595300 Rh6AG361300 Rh6BG368000 Rh6BG368100 Rh6BG368300 Rh6BG368500 Rh6BG368600 Rh6CG375200 Rh6CG375300 Rh7AG030100 Rh7AG031000 Rh7AG032000 Rh7BG029400 Rh7BG029500 Rh7BG032100 Rh7CG031100 Rh7CG032700 Rh7CG032800 Rh7CG033900 Rh7DG030400 Rh7DG032400
rosa_wichuraiana Rw7G002420 Rw7G002670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 540
Acc65I GGTACC 1 cut(s) 202
AccB1I GGYRCC 1 cut(s) 202
AccBSI CCGCTC 1 cut(s) 246
AciI CCGC 7 cut(s) 114, 151, 244, 321, 417, 701, 1706
AclWI GGATC 4 cut(s) 460, 488, 1415, 1428
AcoI YGGCCR 5 cut(s) 458, 698, 736, 1374, 1710
AcsI RAATTY 2 cut(s) 964, 998
AcuI CTGAAG 1 cut(s) 223
AcyI GRCGYC 1 cut(s) 105
AfaI GTAC 1 cut(s) 204
AfiI CCNNNNNNNGG 6 cut(s) 475, 533, 616, 745, 1372, 1560
AflIII ACRYGT 1 cut(s) 1743
AgsI TTSAA 9 cut(s) 216, 376, 634, 811, 877, 1065, 1145, 1212, 1489
AjnI CCWGG 3 cut(s) 85, 532, 1010
AluBI AGCT 3 cut(s) 157, 430, 1792
AluI AGCT 3 cut(s) 157, 430, 1792
Alw26I GTCTC 2 cut(s) 293, 347
AlwI GGATC 4 cut(s) 460, 488, 1415, 1428
AlwNI CAGNNNCTG 1 cut(s) 407
Ama87I CYCGRG 1 cut(s) 1592
AoxI GGCC 8 cut(s) 458, 477, 698, 736, 747, 1374, 1479, 1710
ApeKI GCWGC 3 cut(s) 131, 1242, 1352
ApoI RAATTY 2 cut(s) 964, 998
Asp700I GAANNNNTTC 1 cut(s) 1670
Asp718I GGTACC 1 cut(s) 202
AspLEI GCGC 1 cut(s) 37
AspS9I GGNCC 3 cut(s) 367, 747, 1179
AsuC2I CCSGG 2 cut(s) 476, 740
AsuHPI GGTGA 5 cut(s) 372, 536, 773, 851, 1000
AvaI CYCGRG 1 cut(s) 1592
AvaII GGWCC 2 cut(s) 367, 1179
BaeGI GKGCMC 1 cut(s) 64
BalI TGGCCA 2 cut(s) 1376, 1712
BamHI GGATCC 1 cut(s) 1420
BanI GGYRCC 1 cut(s) 202
BbvI GCAGC 3 cut(s) 143, 1254, 1339
BccI CCATC 5 cut(s) 406, 830, 1364, 1398, 1406
BceAI ACGGC 4 cut(s) 64, 560, 734, 1597
BcgI CGANNNNNNTGC 2 cut(s) 1231, 1265
BciT130I CCWGG 3 cut(s) 87, 534, 1012
BclI TGATCA 1 cut(s) 1167
BcnI CCSGG 2 cut(s) 476, 740
BcoDI GTCTC 2 cut(s) 293, 347
BfaI CTAG 1 cut(s) 1176
BfmI CTRYAG 1 cut(s) 1125
BglI GCCNNNNNGGC 1 cut(s) 1251
BisI GCNGC 6 cut(s) 132, 151, 244, 701, 1243, 1353
BlsI GCNGC 6 cut(s) 133, 152, 245, 702, 1244, 1354
Bme1390I CCNGG 5 cut(s) 87, 476, 534, 740, 1012
Bme18I GGWCC 2 cut(s) 367, 1179
BmeT110I CYCGRG 1 cut(s) 1592
BmgT120I GGNCC 3 cut(s) 367, 747, 1179
BmiI GGNNCC 3 cut(s) 204, 369, 1422
BmrFI CCNGG 5 cut(s) 87, 476, 534, 740, 1012
BmsI GCATC 4 cut(s) 1014, 1393, 1534, 1608
BpuEI CTTGAG 2 cut(s) 182, 369
BpuMI CCSGG 2 cut(s) 476, 740
Bsa29I ATCGAT 1 cut(s) 1528
BsaAI YACGTR 1 cut(s) 625
BsaHI GRCGYC 1 cut(s) 105
BsaI GGTCTC 1 cut(s) 293
BsaJI CCNNGG 3 cut(s) 474, 739, 750
BsaWI WCCGGW 2 cut(s) 205, 546
BsaXI ACNNNNNCTCC 8 cut(s) 81, 111, 344, 374, 878, 908, 1371, 1401
Bsc4I CCNNNNNNNGG 6 cut(s) 475, 533, 616, 745, 1372, 1560
Bse118I RCCGGY 1 cut(s) 166
Bse1I ACTGG 3 cut(s) 585, 991, 1475
Bse3DI GCAATG 1 cut(s) 1244
BseBI CCWGG 3 cut(s) 87, 534, 1012
BseCI ATCGAT 1 cut(s) 1528
BseDI CCNNGG 3 cut(s) 474, 739, 750
BseGI GGATG 4 cut(s) 317, 841, 1263, 1356
BseLI CCNNNNNNNGG 6 cut(s) 475, 533, 616, 745, 1372, 1560
BseMI GCAATG 1 cut(s) 1244
BseMII CTCAG 1 cut(s) 1617
BseNI ACTGG 3 cut(s) 585, 991, 1475
BseRI GAGGAG 3 cut(s) 105, 132, 1050
BseSI GKGCMC 1 cut(s) 64
BseX3I CGGCCG 1 cut(s) 736
BseXI GCAGC 3 cut(s) 143, 1254, 1339
BsgI GTGCAG 1 cut(s) 1431
Bsh1285I CGRYCG 1 cut(s) 739
BshFI GGCC 8 cut(s) 460, 479, 700, 738, 749, 1376, 1481, 1712
BshNI GGYRCC 1 cut(s) 202
BshVI ATCGAT 1 cut(s) 1528
BsiEI CGRYCG 1 cut(s) 739
BsiHKCI CYCGRG 1 cut(s) 1592
BsiSI CCGG 6 cut(s) 167, 206, 461, 476, 547, 739
BslFI GGGAC 2 cut(s) 353, 913
BslI CCNNNNNNNGG 6 cut(s) 475, 533, 616, 745, 1372, 1560
BsmAI GTCTC 2 cut(s) 293, 347
BsmBI CGTCTC 1 cut(s) 347
BsmFI GGGAC 2 cut(s) 353, 913
BsmI GAATGC 6 cut(s) 37, 211, 458, 629, 806, 1354
BsnI GGCC 8 cut(s) 460, 479, 700, 738, 749, 1376, 1481, 1712
Bso31I GGTCTC 1 cut(s) 293
BsoBI CYCGRG 1 cut(s) 1592
Bsp1286I GDGCHC 1 cut(s) 64
Bsp143I GATC 8 cut(s) 465, 493, 1167, 1278, 1404, 1420, 1459, 1529
BspACI CCGC 7 cut(s) 114, 151, 244, 321, 417, 701, 1706
BspANI GGCC 8 cut(s) 460, 479, 700, 738, 749, 1376, 1481, 1712
BspCNI CTCAG 1 cut(s) 1618
BspDI ATCGAT 1 cut(s) 1528
BspHI TCATGA 1 cut(s) 1462
BspLI GGNNCC 3 cut(s) 204, 369, 1422
BspMAI CTGCAG 1 cut(s) 1129
BspPI GGATC 4 cut(s) 460, 488, 1415, 1428
BspT107I GGYRCC 1 cut(s) 202
BspTNI GGTCTC 1 cut(s) 293
BsrBI CCGCTC 1 cut(s) 246
BsrDI GCAATG 1 cut(s) 1244
BsrFI RCCGGY 1 cut(s) 166
BsrI ACTGG 3 cut(s) 585, 991, 1475
BssAI RCCGGY 1 cut(s) 166
BssECI CCNNGG 3 cut(s) 474, 739, 750
BssMI GATC 8 cut(s) 465, 493, 1167, 1278, 1404, 1420, 1459, 1529
BssNI GRCGYC 1 cut(s) 105
Bst2UI CCWGG 3 cut(s) 87, 534, 1012
Bst4CI ACNGT 2 cut(s) 409, 1808
Bst6I CTCTTC 1 cut(s) 1152
BstACI GRCGYC 1 cut(s) 105
BstAPI GCANNNNNTGC 1 cut(s) 1349
BstBAI YACGTR 1 cut(s) 625
BstC8I GCNNGC 3 cut(s) 155, 458, 1610
BstDEI CTNAG 3 cut(s) 1581, 1626, 1775
BstDSI CCRYGG 1 cut(s) 750
BstENI CCTNNNNNAGG 1 cut(s) 531
BstF5I GGATG 4 cut(s) 317, 841, 1263, 1356
BstHHI GCGC 1 cut(s) 37
BstKTI GATC 8 cut(s) 468, 496, 1170, 1281, 1407, 1423, 1462, 1532
BstMAI GTCTC 2 cut(s) 293, 347
BstMBI GATC 8 cut(s) 465, 493, 1167, 1278, 1404, 1420, 1459, 1529
BstMCI CGRYCG 1 cut(s) 739
BstMWI GCNNNNNNNGC 6 cut(s) 111, 163, 1251, 1349, 1618, 1789
BstNI CCWGG 3 cut(s) 87, 534, 1012
BstSCI CCNGG 5 cut(s) 85, 474, 532, 738, 1010
BstSFI CTRYAG 1 cut(s) 1125
BstSLI GKGCMC 1 cut(s) 64
BstV1I GCAGC 3 cut(s) 143, 1254, 1339
BstX2I RGATCY 2 cut(s) 465, 1420
BstXI CCANNNNNNTGG 1 cut(s) 456
BstYI RGATCY 2 cut(s) 465, 1420
BstZI CGGCCG 1 cut(s) 736
Bsu15I ATCGAT 1 cut(s) 1528
BsuRI GGCC 8 cut(s) 460, 479, 700, 738, 749, 1376, 1481, 1712
BsuTUI ATCGAT 1 cut(s) 1528
BtgI CCRYGG 1 cut(s) 750
BtsCI GGATG 4 cut(s) 317, 841, 1263, 1356
BtsIMutI CAGTG 1 cut(s) 1482
Cac8I GCNNGC 3 cut(s) 155, 458, 1610
CaiI CAGNNNCTG 1 cut(s) 407
CciI TCATGA 1 cut(s) 1462
CfoI GCGC 1 cut(s) 37
Cfr10I RCCGGY 1 cut(s) 166
Cfr13I GGNCC 3 cut(s) 367, 747, 1179
ClaI ATCGAT 1 cut(s) 1528
CseI GACGC 1 cut(s) 94
CsiI ACCWGGT 1 cut(s) 1010
Csp6I GTAC 1 cut(s) 203
CspCI CAANNNNNGTGG 2 cut(s) 1257, 1292
CviAII CATG 6 cut(s) 789, 1183, 1327, 1344, 1463, 1560
CviQI GTAC 1 cut(s) 203
DdeI CTNAG 3 cut(s) 1581, 1626, 1775
DpnI GATC 8 cut(s) 467, 495, 1169, 1280, 1406, 1422, 1461, 1531
DpnII GATC 8 cut(s) 465, 493, 1167, 1278, 1404, 1420, 1459, 1529
EaeI YGGCCR 5 cut(s) 458, 698, 736, 1374, 1710
EagI CGGCCG 1 cut(s) 736
Eam1104I CTCTTC 1 cut(s) 1152
EarI CTCTTC 1 cut(s) 1152
EciI GGCGGA 2 cut(s) 129, 406
EclXI CGGCCG 1 cut(s) 736
Eco31I GGTCTC 1 cut(s) 293
Eco32I GATATC 1 cut(s) 1288
Eco47I GGWCC 2 cut(s) 367, 1179
Eco52I CGGCCG 1 cut(s) 736
Eco57I CTGAAG 1 cut(s) 223
Eco88I CYCGRG 1 cut(s) 1592
EcoNI CCTNNNNNAGG 1 cut(s) 531
EcoRII CCWGG 3 cut(s) 85, 532, 1010
EcoRV GATATC 1 cut(s) 1288
EcoT22I ATGCAT 1 cut(s) 291
Esp3I CGTCTC 1 cut(s) 347
FaeI CATG 6 cut(s) 792, 1186, 1330, 1347, 1466, 1563
FaqI GGGAC 2 cut(s) 353, 913
FatI CATG 6 cut(s) 788, 1182, 1326, 1343, 1462, 1559
FbaI TGATCA 1 cut(s) 1167
Fnu4HI GCNGC 6 cut(s) 132, 151, 244, 701, 1243, 1353
FokI GGATG 4 cut(s) 304, 848, 1250, 1343
Fsp4HI GCNGC 6 cut(s) 132, 151, 244, 701, 1243, 1353
FspBI CTAG 1 cut(s) 1176
GlaI GCGC 1 cut(s) 36
GluI GCNGC 6 cut(s) 132, 151, 244, 701, 1243, 1353
HaeIII GGCC 8 cut(s) 460, 479, 700, 738, 749, 1376, 1481, 1712
HapII CCGG 6 cut(s) 167, 206, 461, 476, 547, 739
HgaI GACGC 1 cut(s) 94
HhaI GCGC 1 cut(s) 37
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 6 cut(s) 792, 1186, 1330, 1347, 1466, 1563
Hin6I GCGC 1 cut(s) 35
HinP1I GCGC 1 cut(s) 35
HincII GTYRAC 1 cut(s) 1305
HindII GTYRAC 1 cut(s) 1305
HindIII AAGCTT 1 cut(s) 428
HinfI GANTC 6 cut(s) 445, 515, 866, 1091, 1323, 1556
HpaII CCGG 6 cut(s) 167, 206, 461, 476, 547, 739
HphI GGTGA 5 cut(s) 372, 536, 773, 851, 1000
Hpy166II GTNNAC 3 cut(s) 600, 1081, 1305
Hpy188I TCNGA 4 cut(s) 43, 1261, 1459, 1627
Hpy188III TCNNGA 6 cut(s) 449, 995, 1051, 1402, 1463, 1663
Hpy8I GTNNAC 3 cut(s) 600, 1081, 1305
Hpy99I CGWCG 1 cut(s) 110
HpyAV CCTTC 4 cut(s) 911, 1025, 1035, 1775
HpyCH4III ACNGT 2 cut(s) 409, 1808
HpyCH4IV ACGT 3 cut(s) 624, 976, 1745
HpyCH4V TGCA 9 cut(s) 230, 289, 1005, 1127, 1186, 1242, 1295, 1384, 1448
HpyF10VI GCNNNNNNNGC 6 cut(s) 111, 163, 1251, 1349, 1618, 1789
HpyF3I CTNAG 3 cut(s) 1581, 1626, 1775
HpySE526I ACGT 3 cut(s) 624, 976, 1745
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 6 cut(s) 792, 1186, 1330, 1347, 1466, 1563
HspAI GCGC 1 cut(s) 35
KpnI GGTACC 1 cut(s) 206
Ksp22I TGATCA 1 cut(s) 1167
Kzo9I GATC 8 cut(s) 465, 493, 1167, 1278, 1404, 1420, 1459, 1529
LmnI GCTCC 2 cut(s) 208, 251
Lsp1109I GCAGC 3 cut(s) 143, 1254, 1339
LweI GCATC 4 cut(s) 1014, 1393, 1534, 1608
MabI ACCWGGT 1 cut(s) 1010
MaeI CTAG 1 cut(s) 1176
MaeII ACGT 3 cut(s) 624, 976, 1745
MaeIII GTNAC 6 cut(s) 378, 637, 664, 844, 1112, 1808
MalI GATC 8 cut(s) 467, 495, 1169, 1280, 1406, 1422, 1461, 1531
MbiI CCGCTC 1 cut(s) 246
MboI GATC 8 cut(s) 465, 493, 1167, 1278, 1404, 1420, 1459, 1529
MboII GAAGA 9 cut(s) 135, 229, 428, 961, 1166, 1169, 1205, 1238, 1763
MfeI CAATTG 1 cut(s) 1370
MflI RGATCY 2 cut(s) 465, 1420
MhlI GDGCHC 1 cut(s) 64
MlsI TGGCCA 2 cut(s) 1376, 1712
MluNI TGGCCA 2 cut(s) 1376, 1712
MlyI GAGTC 2 cut(s) 1085, 1317
MmeI TCCRAC 2 cut(s) 106, 997
Mox20I TGGCCA 2 cut(s) 1376, 1712
Mph1103I ATGCAT 1 cut(s) 291
MroXI GAANNNNTTC 1 cut(s) 1670
MscI TGGCCA 2 cut(s) 1376, 1712
MseI TTAA 5 cut(s) 719, 780, 1109, 1521, 1748
MslI CAYNNNNRTG 1 cut(s) 42
Msp20I TGGCCA 2 cut(s) 1376, 1712
MspI CCGG 6 cut(s) 167, 206, 461, 476, 547, 739
MspR9I CCNGG 5 cut(s) 87, 476, 534, 740, 1012
MunI CAATTG 1 cut(s) 1370
Mva1269I GAATGC 6 cut(s) 37, 211, 458, 629, 806, 1354
MvaI CCWGG 3 cut(s) 87, 534, 1012
MwoI GCNNNNNNNGC 6 cut(s) 111, 163, 1251, 1349, 1618, 1789
NciI CCSGG 2 cut(s) 476, 740
NdeII GATC 8 cut(s) 465, 493, 1167, 1278, 1404, 1420, 1459, 1529
NlaIII CATG 6 cut(s) 792, 1186, 1330, 1347, 1466, 1563
NlaIV GGNNCC 3 cut(s) 204, 369, 1422
NmuCI GTSAC 3 cut(s) 378, 637, 664
NsiI ATGCAT 1 cut(s) 291
PagI TCATGA 1 cut(s) 1462
PctI GAATGC 6 cut(s) 37, 211, 458, 629, 806, 1354
PdmI GAANNNNTTC 1 cut(s) 1670
PfeI GAWTC 4 cut(s) 445, 515, 866, 1556
PflFI GACNNNGTC 1 cut(s) 358
PkrI GCNGC 6 cut(s) 133, 152, 245, 702, 1244, 1354
PleI GAGTC 2 cut(s) 1085, 1317
PpsI GAGTC 2 cut(s) 1085, 1317
Ppu21I YACGTR 1 cut(s) 625
PsiI TTATAA 1 cut(s) 540
Psp6I CCWGG 3 cut(s) 85, 532, 1010
PspGI CCWGG 3 cut(s) 85, 532, 1010
PspN4I GGNNCC 3 cut(s) 204, 369, 1422
PspPI GGNCC 3 cut(s) 367, 747, 1179
PstI CTGCAG 1 cut(s) 1129
PstNI CAGNNNCTG 1 cut(s) 407
PsuI RGATCY 2 cut(s) 465, 1420
PsyI GACNNNGTC 1 cut(s) 358
RsaI GTAC 1 cut(s) 204
RsaNI GTAC 1 cut(s) 203
RseI CAYNNNNRTG 1 cut(s) 42
SaqAI TTAA 5 cut(s) 719, 780, 1109, 1521, 1748
SatI GCNGC 6 cut(s) 132, 151, 244, 701, 1243, 1353
Sau3AI GATC 8 cut(s) 465, 493, 1167, 1278, 1404, 1420, 1459, 1529
Sau96I GGNCC 3 cut(s) 367, 747, 1179
SchI GAGTC 2 cut(s) 1085, 1317
ScrFI CCNGG 5 cut(s) 87, 476, 534, 740, 1012
SduI GDGCHC 1 cut(s) 64
SexAI ACCWGGT 1 cut(s) 1010
SfaNI GCATC 4 cut(s) 1014, 1393, 1534, 1608
SfcI CTRYAG 1 cut(s) 1125
SinI GGWCC 2 cut(s) 367, 1179
SmiMI CAYNNNNRTG 1 cut(s) 42
SmlI CTYRAG 2 cut(s) 161, 384
SmoI CTYRAG 2 cut(s) 161, 384
SsiI CCGC 7 cut(s) 114, 151, 244, 321, 417, 701, 1706
SspMI CTAG 1 cut(s) 1176
StyD4I CCNGG 5 cut(s) 85, 474, 532, 738, 1010
TaaI ACNGT 2 cut(s) 409, 1808
TaiI ACGT 3 cut(s) 627, 979, 1748
TaqI TCGA 2 cut(s) 1029, 1528
TauI GCSGC 3 cut(s) 153, 246, 703
TfiI GAWTC 4 cut(s) 445, 515, 866, 1556
Tru1I TTAA 5 cut(s) 719, 780, 1109, 1521, 1748
Tru9I TTAA 5 cut(s) 719, 780, 1109, 1521, 1748
TscAI CASTG 1 cut(s) 1482
TseFI GTSAC 3 cut(s) 378, 637, 664
TseI GCWGC 3 cut(s) 131, 1242, 1352
Tsp45I GTSAC 3 cut(s) 378, 637, 664
TspDTI ATGAA 7 cut(s) 84, 777, 920, 1090, 1233, 1431, 1757
TspGWI ACGGA 2 cut(s) 365, 859
TspRI CASTG 1 cut(s) 1482
Tth111I GACNNNGTC 1 cut(s) 358
VpaK11BI GGWCC 2 cut(s) 367, 1179
XagI CCTNNNNNAGG 1 cut(s) 531
XapI RAATTY 2 cut(s) 964, 998
XmnI GAANNNNTTC 1 cut(s) 1670
XspI CTAG 1 cut(s) 1176
Zsp2I ATGCAT 1 cut(s) 291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.