Rh7AG032000

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000424
Physical Location & Seq
Forward (+)
2207829 .. 2210185
2357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG032000.1

Sequence Viewer

Length: 2310 bp
ATGGAAGAAGGGAAAGCCAAGTCTTTATTTGTGATGGCACATTCTGGTCACAGCTCATATAGCTCGCTGTATGAGGTGAAAATCCAACCAGGAGGACAAGTCATAGGCGGCGGTGGAGAATGTAGCAACCGTCGTAAGAGGAGGAGTTCTAGGCGTCGTAGGGTTCTGCTACTTGAGCCTGTGGCAGCAAGGTTACCAGAGCATTCACACTTGGGAACTGCCAGGTTTTTCAGCCGCTCCAAACTATACTTGTTCCCAAACAAAACTACTCGGAGTACCTCAAAACCGCCCTATGCATATGTCTTCGACACGGAGACAAAGTCATTGGTCCCATTTAACTCTTCACCTCAAGCTCATAAGCCTTATGCAACTGTTGTTTCCGCCTATGGCAAGCTTTATCATCTTGCTACCAATCCACATTGCTGGCCGGAGATCCCAACTCCGGCCTTTGAGCGATATGATCCTGCCACTAATTGTTGGGAGTCGCTCCCTCCTTGTCCGGCCAGGCCAAGGAAGATACTAGGCTATGCAGTTTGTTATGGCTTTATTCTGTTCTCACTCGGCGACGACTCCTTCATGGCTTTTGATGTCACCAGAAAACAATGGCATGAAGTCCAACTGTGGCTGCCTGCTTCTGGTGATCATCGGTTCAGTGGGAGGGCTTCTGGTGATCATCGGTTCAGTGGGAGGGCTGTGGTTGTAGGTGACACTATCTATACCTTTAAGATTTCAAGTAATAGTGTTGTTGCATACAACTTTTGGTGGGATTTAGATCAGGAAGGTGATGTTACATTTTATATAAGCCCTCAACCCGATTTGGAAGGCTTGCATATCAACAAGGCCTTTCTGGTGCAAACAGGTCGTTATAAGTTTACAGAAACTAGACAAGGATATTTGGTTCACTTGGGAAACTTGGATTTTTGTCTTGTCCAAAATCGGTTCAAAAAACATAGAGCTGATCGTGAACAGAAACTCTGTATCACCACGTTTCAAGTTGTGGTCGACGATGAACGGGGAGGGAAGCATATCATCAAGACCTTACATTCAACTTTCTGTGAGGTGGACTCCCTCATTCGTTTGGGTTTCAGCTTTACTCCAGATTGTGATGATTTTGAACCCACAGAAGAGGAAATGAGACAAGCTGCAACATTGAGTCACCTTGCTGATTTCGATGCAAATGAATTCGGCATGTCACACACTATCCCACAAGAGCTAATCTTTGACATACTTGCAAGGCTTTCGACCAAGGATTTGATACGACTCATGTGTGTTTCCAAAGCATGGAATGCAGCCATCCAAGACCCAGAATGGGCCAAGCTGCATCGCCAGCTCTCCATCAAGCGCAACTCTTTGGATCCTACCTTTTTAATTCTACCATCTCAGCTTGATGAGTTTTTTACAATGACCTTGTTCGACAATGGCACAAAGGGAAGACTTGTGTTAATCAAGCAGCAGTCAAAGCAGGTTGAGAAAAGAAATAAGATCTTGGGCTGCAGCAATGGTTTGCTTTGCATTTACGAATCTATGGAAAATGAAGACTTTGGTTTGTGGAATCCGACAATCCACAAGTTTAAGAGGATTCCTTTGTCAGCCTTCAATAAGTGGACGCAGAGCAAGACCTTTTATGGCTTCGGGTATGATTCAGTCAATGATGACTATAAGTTTGTGAAAATGGGACAGTTTAAGGATCCGAGTGGTGTTGTTACAAGCTCGGAAGTGCAGGTTTATAGTCTAAAATTGCACTCATGGAAAAGGGTCCAAGATTTGCCTTCTCATCTTAATAAAGATTATATACTTGCCTCAAATGGGGTTTGTCTGGCTAGTTCCTTACATTGGTTGATGAGATTAGGTGATAAAGGTGGAGGACCAATGATAGTTCTATCCCTTGATCTGGCAAGTGAAGAATACCACTGGTTTTCTGCCCCAGCTTGTTATAACAGTGAGCATTTGAGTATCAACTACTTGGATTTGCATGTAATGGCAGGGTTCTTATGCTTTTGTTTCGACACTGATTCCCTCCGGGAGACTTGGATTTTGAAGGAATATGGAGTTACCAAATCTTGGACCAAGCTTTGTTATTATAAAAGAAATTGGGGTTGCAATCCTTTGATCTTTTCAAAGTGTGGTACGAAGATTCTTTTCGCAAGAGTTGCGGAATTGTTTTGGTATGATCTGGAGAACAAGAGAATTGAAAATGTCAGCACTGATATCAGGCCTGTGAGGAGTAGGCCGTTACAGACGGTAACTTCTGTGGAAAACCTTAATCTTCTTAGGAGGCGACCAGAACTACCTTATAATAACTGTCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

769

Amino Acids

88.24

Weight (kDa)

8.74

Isoelectric Point (pI)

50.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 12 - 346 4.3e-10 Protein of unknown function (DUF1668)
F-box-like PF12937 401 - 442 1.7e-09 F-box-like
F-box PF00646 401 - 436 6.1e-09 F-box domain
FBA_3 PF08268 463 - 694 2.7e-17 F-box associated beta propeller domain
FBA_1 PF07734 482 - 695 3e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000424)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32600 AT1G54640
fragaria_vesca FvH4_2g26290 FvH4_2g26290 FvH4_2g26300 FvH4_5g16160 FvH4_6g49561 FvH4_6g49581
malus_domestica MD02G1261500.v1.1 MD02G1290400.v1.1 MD02G1290700.v1.1 MD02G1290800.v1.1 MD05G1183700.v1.1 MD07G1058700.v1.1 MD07G1058900.v1.1 MD07G1059200.v1.1 MD08G1079300.v1.1 MD08G1079600.v1.1 MD16G1218300.v1.1 MD16G1218400.v1.1 MD16G1218600.v1.1 MD16G1218700.v1.1 MD17G1102900.v1.1
prunus_persica Prupe.1G024400_v2.0.a1 Prupe.1G024500_v2.0.a1 Prupe.1G024600_v2.0.a1 Prupe.1G024800_v2.0.a1 Prupe.1G025300_v2.0.a1 Prupe.1G025400_v2.0.a1 Prupe.1G556300_v2.0.a1 Prupe.3G094100_v2.0.a1 Prupe.3G094200_v2.0.a1
pyrus_communis pycom02g22350 pycom05g27240 pycom07g04530 pycom07g04540 pycom08g06570 pycom10g07370 pycom16g17130 pycom16g17140 pycom16g17150 pycom16g17160 pycom16g17180 pycom17g09720
rosa_chinensis RchiOBHm_Chr6g0294901 RchiOBHm_Chr7g0179991 RchiOBHm_Chr7g0180101 RchiOBHm_Chr7g0180241
rosa_laevigata RLG00000005281 RLG00000005282 RLG00000005293 RLG00000005304 RLG00000011829 RLG00000011831 RLG00000011832 RLG00000021887
rosa_multiflora Rmu_co8519977.1_g000001 Rmu_sc0008966.1_g000002 Rmu_sc0008966.1_g000003 Rmu_sc0008966.1_g000008 Rmu_sc0011963.1_g000010 Rmu_ssc0000119.1_g000012 Rmu_ssc0000119.1_g000032
rosa_roxburghii Rroxscaffold_2G00081970 Rroxscaffold_2G00081980 Rroxscaffold_3G00273030 Rroxscaffold_3G00273250 Rroxscaffold_7G00172880 Rroxscaffold_7G00172900
rosa_rugosa Rorug02G0541400 Rorug06G0429600
rosa_samantha Rh2AG613800 Rh2CG595200 Rh2CG595300 Rh6AG361300 Rh6BG368000 Rh6BG368100 Rh6BG368300 Rh6BG368500 Rh6BG368600 Rh6CG375200 Rh6CG375300 Rh7AG030100 Rh7AG031000 Rh7AG032000 Rh7BG029400 Rh7BG029500 Rh7BG032100 Rh7CG031100 Rh7CG032700 Rh7CG032800 Rh7CG033900 Rh7DG030400 Rh7DG032400
rosa_wichuraiana Rw7G002420 Rw7G002670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 867, 1935, 2082, 2295
Acc36I ACCTGC 2 cut(s) 1453, 1711
AccB7I CCANNNNNTGG 2 cut(s) 1281, 2061
AccBSI CCGCTC 1 cut(s) 237
AccI GTMKAC 1 cut(s) 1002
AciI CCGC 6 cut(s) 108, 111, 235, 287, 381, 2153
AclWI GGATC 6 cut(s) 427, 455, 1349, 1362, 1682, 1695
AcoI YGGCCR 2 cut(s) 425, 501
AcsI RAATTY 1 cut(s) 1181
AcyI GRCGYC 1 cut(s) 154
AfaI GTAC 2 cut(s) 277, 2128
AfiI CCNNNNNNNGG 9 cut(s) 442, 510, 635, 1281, 1309, 1806, 1833, 1891, 2061
AgsI TTSAA 9 cut(s) 732, 943, 992, 1047, 1115, 1597, 2038, 2118, 2192
AjnI CCWGG 3 cut(s) 88, 221, 503
AloI GAACNNNNNNTCC 2 cut(s) 882, 914
Alw26I GTCTC 3 cut(s) 308, 1129, 2018
AlwI GGATC 6 cut(s) 427, 455, 1349, 1362, 1682, 1695
AoxI GGCC 8 cut(s) 425, 444, 501, 506, 840, 1311, 2213, 2228
ApeKI GCWGC 8 cut(s) 185, 625, 1142, 1289, 1318, 1450, 1491, 1494
ApoI RAATTY 1 cut(s) 1181
ArsI GACNNNNNNTTYG 6 cut(s) 1234, 1266, 1646, 1678, 2017, 2049
AspLEI GCGC 1 cut(s) 1344
AspS9I GGNCC 5 cut(s) 328, 1311, 1756, 1865, 2064
AsuC2I CCSGG 1 cut(s) 2021
AvaII GGWCC 4 cut(s) 328, 1756, 1865, 2064
BamHI GGATCC 2 cut(s) 1354, 1687
BbsI GAAGAC 3 cut(s) 295, 1438, 1542
BbvI GCAGC 8 cut(s) 197, 612, 1129, 1301, 1305, 1462, 1478, 1506
BccI CCATC 4 cut(s) 28, 1301, 1343, 1384
BceAI ACGGC 1 cut(s) 2215
BcgI CGANNNNNNTGC 4 cut(s) 842, 876, 1221, 1255
BciT130I CCWGG 3 cut(s) 90, 223, 505
BclI TGATCA 2 cut(s) 640, 670
BcnI CCSGG 1 cut(s) 2021
BcoDI GTCTC 3 cut(s) 308, 1129, 2018
BfaI CTAG 4 cut(s) 150, 521, 882, 1821
BfmI CTRYAG 1 cut(s) 1492
BfuAI ACCTGC 2 cut(s) 1453, 1711
BglII AGATCT 1 cut(s) 1482
Bme1390I CCNGG 4 cut(s) 90, 223, 505, 2021
Bme18I GGWCC 4 cut(s) 328, 1756, 1865, 2064
BmgT120I GGNCC 5 cut(s) 328, 1311, 1756, 1865, 2064
BmiI GGNNCC 4 cut(s) 330, 1356, 1689, 1757
BmrFI CCNGG 4 cut(s) 90, 223, 505, 2021
BmsI GCATC 2 cut(s) 1162, 1330
BpiI GAAGAC 3 cut(s) 295, 1438, 1542
BplI GAGNNNNNCTC 2 cut(s) 1049, 1081
BpmI CTGGAG 2 cut(s) 1080, 2195
BpuEI CTTGAG 2 cut(s) 194, 333
BpuMI CCSGG 1 cut(s) 2021
BsaBI GATNNNNATC 1 cut(s) 771
BsaHI GRCGYC 1 cut(s) 154
BsaJI CCNNGG 2 cut(s) 509, 1245
BsaXI ACNNNNNCTCC 4 cut(s) 84, 114, 305, 335
Bsc4I CCNNNNNNNGG 9 cut(s) 442, 510, 635, 1281, 1309, 1806, 1833, 1891, 2061
Bse1I ACTGG 1 cut(s) 1916
Bse3DI GCAATG 2 cut(s) 418, 1504
Bse8I GATNNNNATC 1 cut(s) 771
BseBI CCWGG 3 cut(s) 90, 223, 505
BseDI CCNNGG 2 cut(s) 509, 1245
BseGI GGATG 1 cut(s) 1293
BseJI GATNNNNATC 1 cut(s) 771
BseLI CCNNNNNNNGG 9 cut(s) 442, 510, 635, 1281, 1309, 1806, 1833, 1891, 2061
BseMI GCAATG 2 cut(s) 418, 1504
BseMII CTCAG 1 cut(s) 1394
BseNI ACTGG 1 cut(s) 1916
BseRI GAGGAG 3 cut(s) 154, 157, 2236
BseXI GCAGC 8 cut(s) 197, 612, 1129, 1301, 1305, 1462, 1478, 1506
BseYI CCCAGC 1 cut(s) 1924
BsgI GTGCAG 1 cut(s) 1739
BshFI GGCC 8 cut(s) 427, 446, 503, 508, 842, 1313, 2215, 2230
BsiSI CCGG 4 cut(s) 428, 443, 500, 2020
BslFI GGGAC 2 cut(s) 314, 1689
BslI CCNNNNNNNGG 9 cut(s) 442, 510, 635, 1281, 1309, 1806, 1833, 1891, 2061
BsmAI GTCTC 3 cut(s) 308, 1129, 2018
BsmFI GGGAC 2 cut(s) 314, 1689
BsmI GAATGC 2 cut(s) 202, 1291
BsnI GGCC 8 cut(s) 427, 446, 503, 508, 842, 1313, 2215, 2230
BspACI CCGC 6 cut(s) 108, 111, 235, 287, 381, 2153
BspANI GGCC 8 cut(s) 427, 446, 503, 508, 842, 1313, 2215, 2230
BspCNI CTCAG 1 cut(s) 1393
BspLI GGNNCC 4 cut(s) 330, 1356, 1689, 1757
BspMAI CTGCAG 1 cut(s) 1496
BspMI ACCTGC 2 cut(s) 1453, 1711
BspPI GGATC 6 cut(s) 427, 455, 1349, 1362, 1682, 1695
BsrBI CCGCTC 1 cut(s) 237
BsrDI GCAATG 2 cut(s) 418, 1504
BsrI ACTGG 1 cut(s) 1916
BssECI CCNNGG 2 cut(s) 509, 1245
BssNI GRCGYC 1 cut(s) 154
BssT1I CCWWGG 2 cut(s) 509, 1245
Bst2UI CCWGG 3 cut(s) 90, 223, 505
Bst4CI ACNGT 7 cut(s) 131, 373, 621, 1680, 1940, 2242, 2303
Bst6I CTCTTC 2 cut(s) 346, 1119
BstACI GRCGYC 1 cut(s) 154
BstAPI GCANNNNNTGC 2 cut(s) 1286, 2150
BstC8I GCNNGC 6 cut(s) 65, 392, 425, 630, 827, 1328
BstDEI CTNAG 2 cut(s) 1380, 2270
BstEII GGTNACC 1 cut(s) 192
BstF5I GGATG 1 cut(s) 1293
BstHHI GCGC 1 cut(s) 1344
BstMAI GTCTC 3 cut(s) 308, 1129, 2018
BstMWI GCNNNNNNNGC 6 cut(s) 60, 175, 1286, 1327, 1459, 2150
BstNI CCWGG 3 cut(s) 90, 223, 505
BstNSI RCATGY 2 cut(s) 1192, 1976
BstPI GGTNACC 1 cut(s) 192
BstSCI CCNGG 4 cut(s) 88, 221, 503, 2019
BstSFI CTRYAG 1 cut(s) 1492
BstV1I GCAGC 8 cut(s) 197, 612, 1129, 1301, 1305, 1462, 1478, 1506
BstV2I GAAGAC 3 cut(s) 295, 1438, 1542
BstX2I RGATCY 4 cut(s) 432, 1354, 1482, 1687
BstXI CCANNNNNNTGG 1 cut(s) 423
BstYI RGATCY 4 cut(s) 432, 1354, 1482, 1687
BsuRI GGCC 8 cut(s) 427, 446, 503, 508, 842, 1313, 2215, 2230
BtgZI GCGATG 1 cut(s) 1307
BtsCI GGATG 1 cut(s) 1293
BtsIMutI CAGTG 6 cut(s) 658, 688, 1909, 1945, 2007, 2202
BveI ACCTGC 2 cut(s) 1453, 1711
Cac8I GCNNGC 6 cut(s) 65, 392, 425, 630, 827, 1328
CfoI GCGC 1 cut(s) 1344
Cfr13I GGNCC 5 cut(s) 328, 1311, 1756, 1865, 2064
CseI GACGC 2 cut(s) 143, 1615
Csp6I GTAC 2 cut(s) 276, 2127
CviAII CATG 7 cut(s) 577, 608, 1189, 1264, 1281, 1746, 1973
CviQI GTAC 2 cut(s) 276, 2127
DdeI CTNAG 2 cut(s) 1380, 2270
EaeI YGGCCR 2 cut(s) 425, 501
Eam1104I CTCTTC 2 cut(s) 346, 1119
EarI CTCTTC 2 cut(s) 346, 1119
EciI GGCGGA 1 cut(s) 370
Eco130I CCWWGG 2 cut(s) 509, 1245
Eco147I AGGCCT 2 cut(s) 842, 2215
Eco32I GATATC 1 cut(s) 2209
Eco47I GGWCC 4 cut(s) 328, 1756, 1865, 2064
Eco91I GGTNACC 1 cut(s) 192
EcoO65I GGTNACC 1 cut(s) 192
EcoRI GAATTC 1 cut(s) 1181
EcoRII CCWGG 3 cut(s) 88, 221, 503
EcoRV GATATC 1 cut(s) 2209
EcoT14I CCWWGG 2 cut(s) 509, 1245
EcoT22I ATGCAT 1 cut(s) 298
ErhI CCWWGG 2 cut(s) 509, 1245
FaeI CATG 7 cut(s) 580, 611, 1192, 1267, 1284, 1749, 1976
FaqI GGGAC 2 cut(s) 314, 1689
FatI CATG 7 cut(s) 576, 607, 1188, 1263, 1280, 1745, 1972
FauNDI CATATG 1 cut(s) 298
FbaI TGATCA 2 cut(s) 640, 670
FblI GTMKAC 1 cut(s) 1002
FokI GGATG 1 cut(s) 1280
FspBI CTAG 4 cut(s) 150, 521, 882, 1821
GlaI GCGC 1 cut(s) 1343
GsaI CCCAGC 1 cut(s) 1928
GsuI CTGGAG 2 cut(s) 1080, 2195
HaeIII GGCC 8 cut(s) 427, 446, 503, 508, 842, 1313, 2215, 2230
HapII CCGG 4 cut(s) 428, 443, 500, 2020
HgaI GACGC 2 cut(s) 143, 1615
HhaI GCGC 1 cut(s) 1344
Hin1I GRCGYC 1 cut(s) 154
Hin1II CATG 7 cut(s) 580, 611, 1192, 1267, 1284, 1749, 1976
Hin6I GCGC 1 cut(s) 1342
HinP1I GCGC 1 cut(s) 1342
HincII GTYRAC 1 cut(s) 1003
HindII GTYRAC 1 cut(s) 1003
HindIII AAGCTT 2 cut(s) 392, 2069
HpaII CCGG 4 cut(s) 428, 443, 500, 2020
Hpy166II GTNNAC 6 cut(s) 873, 901, 965, 1003, 1063, 1605
Hpy188I TCNGA 4 cut(s) 273, 1557, 1692, 1714
Hpy188III TCNNGA 5 cut(s) 776, 962, 1033, 1097, 2174
Hpy8I GTNNAC 6 cut(s) 873, 901, 965, 1003, 1063, 1605
Hpy99I CGWCG 4 cut(s) 135, 159, 569, 1007
HpyAV CCTTC 6 cut(s) 583, 773, 815, 1603, 1779, 2032
HpyCH4III ACNGT 7 cut(s) 131, 373, 621, 1680, 1940, 2242, 2303
HpyCH4IV ACGT 1 cut(s) 986
HpyF10VI GCNNNNNNNGC 6 cut(s) 60, 175, 1286, 1327, 1459, 2150
HpyF3I CTNAG 2 cut(s) 1380, 2270
HpySE526I ACGT 1 cut(s) 986
Hsp92I GRCGYC 1 cut(s) 154
Hsp92II CATG 7 cut(s) 580, 611, 1192, 1267, 1284, 1749, 1976
HspAI GCGC 1 cut(s) 1342
Ksp22I TGATCA 2 cut(s) 640, 670
LmnI GCTCC 2 cut(s) 242, 492
Lsp1109I GCAGC 8 cut(s) 197, 612, 1129, 1301, 1305, 1462, 1478, 1506
LweI GCATC 2 cut(s) 1162, 1330
MaeI CTAG 4 cut(s) 150, 521, 882, 1821
MaeII ACGT 1 cut(s) 986
MbiI CCGCTC 1 cut(s) 237
MflI RGATCY 4 cut(s) 432, 1354, 1482, 1687
MluCI AATT 7 cut(s) 472, 1181, 1368, 1736, 2089, 2156, 2187
MlyI GAGTC 5 cut(s) 491, 563, 1058, 1162, 1254
MmeI TCCRAC 3 cut(s) 109, 640, 1580
Mph1103I ATGCAT 1 cut(s) 298
MseI TTAA 8 cut(s) 336, 723, 1367, 1442, 1572, 1683, 1779, 2262
MspI CCGG 4 cut(s) 428, 443, 500, 2020
MspR9I CCNGG 4 cut(s) 90, 223, 505, 2021
Mva1269I GAATGC 2 cut(s) 202, 1291
MvaI CCWGG 3 cut(s) 90, 223, 505
MwoI GCNNNNNNNGC 6 cut(s) 60, 175, 1286, 1327, 1459, 2150
NciI CCSGG 1 cut(s) 2021
NdeI CATATG 1 cut(s) 298
NlaIII CATG 7 cut(s) 580, 611, 1192, 1267, 1284, 1749, 1976
NlaIV GGNNCC 4 cut(s) 330, 1356, 1689, 1757
NmeAIII GCCGAG 1 cut(s) 540
NmuCI GTSAC 6 cut(s) 47, 589, 704, 1154, 1191, 2303
NsiI ATGCAT 1 cut(s) 298
NspI RCATGY 2 cut(s) 1192, 1976
PceI AGGCCT 2 cut(s) 842, 2215
PctI GAATGC 2 cut(s) 202, 1291
PfeI GAWTC 6 cut(s) 1520, 1552, 1579, 1640, 2012, 2134
PflFI GACNNNGTC 1 cut(s) 319
PflMI CCANNNNNTGG 2 cut(s) 1281, 2061
PfoI TCCNGGA 1 cut(s) 2019
PleI GAGTC 5 cut(s) 490, 563, 1058, 1161, 1254
PpsI GAGTC 5 cut(s) 490, 563, 1058, 1161, 1254
PsiI TTATAA 4 cut(s) 867, 1935, 2082, 2295
Psp6I CCWGG 3 cut(s) 88, 221, 503
PspEI GGTNACC 1 cut(s) 192
PspFI CCCAGC 1 cut(s) 1924
PspGI CCWGG 3 cut(s) 88, 221, 503
PspN4I GGNNCC 4 cut(s) 330, 1356, 1689, 1757
PspPI GGNCC 5 cut(s) 328, 1311, 1756, 1865, 2064
PstI CTGCAG 1 cut(s) 1496
PsuI RGATCY 4 cut(s) 432, 1354, 1482, 1687
PsyI GACNNNGTC 1 cut(s) 319
RsaI GTAC 2 cut(s) 277, 2128
RsaNI GTAC 2 cut(s) 276, 2127
SalI GTCGAC 1 cut(s) 1001
SaqAI TTAA 8 cut(s) 336, 723, 1367, 1442, 1572, 1683, 1779, 2262
Sau96I GGNCC 5 cut(s) 328, 1311, 1756, 1865, 2064
SchI GAGTC 5 cut(s) 491, 563, 1058, 1162, 1254
ScrFI CCNGG 4 cut(s) 90, 223, 505, 2021
SfaNI GCATC 2 cut(s) 1162, 1330
SfcI CTRYAG 1 cut(s) 1492
SinI GGWCC 4 cut(s) 328, 1756, 1865, 2064
SmlI CTYRAG 2 cut(s) 173, 348
SmoI CTYRAG 2 cut(s) 173, 348
Sse9I AATT 7 cut(s) 472, 1181, 1368, 1736, 2089, 2156, 2187
SseBI AGGCCT 2 cut(s) 842, 2215
SsiI CCGC 6 cut(s) 108, 111, 235, 287, 381, 2153
SspMI CTAG 4 cut(s) 150, 521, 882, 1821
StuI AGGCCT 2 cut(s) 842, 2215
StyD4I CCNGG 4 cut(s) 88, 221, 503, 2019
StyI CCWWGG 2 cut(s) 509, 1245
TaaI ACNGT 7 cut(s) 131, 373, 621, 1680, 1940, 2242, 2303
TaiI ACGT 1 cut(s) 989
TaqI TCGA 6 cut(s) 306, 1002, 1170, 1241, 1413, 2004
TasI AATT 7 cut(s) 472, 1181, 1368, 1736, 2089, 2156, 2187
TauI GCSGC 2 cut(s) 111, 237
TfiI GAWTC 6 cut(s) 1520, 1552, 1579, 1640, 2012, 2134
Tru1I TTAA 8 cut(s) 336, 723, 1367, 1442, 1572, 1683, 1779, 2262
Tru9I TTAA 8 cut(s) 336, 723, 1367, 1442, 1572, 1683, 1779, 2262
TscAI CASTG 6 cut(s) 658, 688, 1916, 1945, 2014, 2209
TseFI GTSAC 6 cut(s) 47, 589, 704, 1154, 1191, 2303
TseI GCWGC 8 cut(s) 185, 625, 1142, 1289, 1318, 1450, 1491, 1494
Tsp45I GTSAC 6 cut(s) 47, 589, 704, 1154, 1191, 2303
TspDTI ATGAA 5 cut(s) 565, 624, 1023, 1194, 1548
TspGWI ACGGA 1 cut(s) 326
TspRI CASTG 6 cut(s) 658, 688, 1916, 1945, 2014, 2209
Tth111I GACNNNGTC 1 cut(s) 319
Van91I CCANNNNNTGG 2 cut(s) 1281, 2061
VpaK11BI GGWCC 4 cut(s) 328, 1756, 1865, 2064
XapI RAATTY 1 cut(s) 1181
XceI RCATGY 2 cut(s) 1192, 1976
XmiI GTMKAC 1 cut(s) 1002
XspI CTAG 4 cut(s) 150, 521, 882, 1821
Zsp2I ATGCAT 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.