Rroxscaffold_3G00273250

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000424
Physical Location & Seq
Forward (+)
65096753 .. 65099182
2430 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00273250.1

Sequence Viewer

Length: 2307 bp
ATGGAAGGGAAACCTAAATCTGTTTTTATGGTGGCGCATTCTGATGACGGCTCATATAGTGCCCTATATGAAGTGAAAATCCAACCAGAAGGAGAAGTTATAGGCGTCGTAGGCGGAGGAGGAAGATCAGCAGCAACTCATAAAAAACGCCGCCAGTTACTTGAGCCGGTGGTCAAGTTGTTTGATGACAAAGGTATAGTGGTACCGGAGCATTCAAACTTGGCAACTGCAAGGTGCTTCAGCCGCTCCAAATTATACCTATGGCTGAACGAAAGCAATTCTAAAATGCATAACCAAGAGACCACTACCAACTCAACATCCGCACCCTGCTATGGATATGTTTTGGACACGGAGACGAAGCCATTGGTCCCATTCAAGTCACCTCAAGCACATAAGCCATCAGCAACTGTTATTTCCGCCTTTGGTAAGCTTTATCTTCTTGCGAATCCAGAATGCTGGCCGGAGATCCCAACCCCGGCCTTTGAGCGATATGATCCTGCCACTAATTGTTGGGAATCCCTCCCTCCTTTTCCAGGTTATAATCACCGGAAAGAGATTAGAATAATAGGTTATGCCGTCTGTTCCAGCTTTATTCTCTTCACAGCAGACCACCATAAGGAATACGTGGCATTCAATGTGACCAGAAAACAATGGGCTTTTGATGTGACCAGAAAACAATGGCATGAAGTCAAAGTGTGGCCGCCTACTCAATATCGTTTAACGAATGGTTCAGTCGGCCGGGGGAGGGCCGTGGTTGTAGGTGATACTATCTATACCTTTAATTATTCATGTACTAGTGTAGTGGCATTCAACTTTTGGTGCGATTTAGATGAGGATGGTGATGTTACCTTCTATGTAAGCCCAGAATCCGTTTTGAAAGGCTTGGAGATTAGGTTGGGGACAAAAGGAAAGAAAGAAGGGTATTTGGTTCATTCGGGGAACTTGGATTTTTGTCTTGTCCAAAATTTCTGCCACCGTAGTAGAACTGGTCGTCAAGAATTTTGCATCACCACGTTTCAGGTTGTGGTCGAAGGAGGAGGAAGGCATATCAAGACCTTACATTCAACTATTTGTGAAGTGGACACCCCCGACTCTAATTTCATTTGTTTAAGTTACTGCTTGACTCCAGATGTTGACGATATTGAACCCAAAGAAGAAGAGAGAGTGATCACTACCAAGTCCATGCAACAGAAAGAACAAGGTGTTGTTTCAACAAATGCATTAGAAGAAACAAAGCAATTCAGCCTTTTCGGCACGTCAGACATCCCACAAGAGTTGATCTTTGACATCCTTGCAAGGCTGTCAACCAAGGATTTGATAAAACTCATGTGCGTTTCTAAAGCATGGAATGCTGCCATCCAAGACCCACAATTGGCCAAACTGCATCTCCATCTCTCCATCAAGACCATCAACTCATTGGATCCCACCTTTTATATTCTCTCATCTGTACATCTATCAGATGAATCTTATGCAGTGGCCTTGGATGCCAATGAATATGAAGACTTTGGTTTGTGGAATCCAACAATACAAAAGTTCAAGAAGATTCCCTTGTCAGCCTTCAGTAAGTTCACGAAGAGGAAAACCTTTTACGGATTCGGGTATGATTCAGTTAACGACGATTACAAATTTGTGAGATTGGCACAGTTTGAGGATCATCATCGGAGTGGTGTTGTTACAAGTTCGGAAGTGCAGGTCTACAGTCTAAAATCGCACTCATGGAAAAGGATCCAAGACTTGCCTGCTCATCTTAACAAAGATTTTGAACTTGCCTCTATAGGGGTTTGTGTTGACGGTGCTTTACATTGGTTGATGAGATTACGTGGTGAAAGTGTGAGAGGGATGATAGTTCTAACCCTTCATCTCACAACTGAAGAGTATCACTGGTTTTCTACCCCTGATTATAAATATCCATGTCGCTGTGCAGATTCAAAGGACAAGCGTAAAAACAGGCACTGTTTGTTTTTGCAAGTTTTGGGAGGGTGCTTATGTTTTCGATTCCAATGTGATCTCCTGGATGCTTGGATTTTGAAGGAAAATGGAGTTGCCGAATCATGGACTAAACTTTATTCTACCAAGGAACTGTCCGAGTTATTGTCCTGCCAGCCTTTGATGCTTTCTGAGTGTGGTAAAATGGTTCTTTTCTCAAATCACGTTGGGAACACTTTCTGGTTTGATTTAGAGAATAAGAAACGTAAAATGGTGGCCAGACCCGATGAACGTGTTTTTGGCTTTGACACGTTAATTACTTGTCAAACCCTTCATCTTCTTAGGAGGCGACCAGAGCTTCCTTGTAATTACTGTTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

768

Amino Acids

87.61

Weight (kDa)

7.29

Isoelectric Point (pI)

41.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 113 - 233 2e-08 Protein of unknown function (DUF1668)
F-box PF00646 420 - 458 1.5e-09 F-box domain
F-box-like PF12937 420 - 458 4.9e-09 F-box-like
FBA_1 PF07734 499 - 725 3.4e-19 F-box associated beta propeller domain
FBA_3 PF08268 501 - 687 1.4e-14 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000424)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32600 AT1G54640
fragaria_vesca FvH4_2g26290 FvH4_2g26290 FvH4_2g26300 FvH4_5g16160 FvH4_6g49561 FvH4_6g49581
malus_domestica MD02G1261500.v1.1 MD02G1290400.v1.1 MD02G1290700.v1.1 MD02G1290800.v1.1 MD05G1183700.v1.1 MD07G1058700.v1.1 MD07G1058900.v1.1 MD07G1059200.v1.1 MD08G1079300.v1.1 MD08G1079600.v1.1 MD16G1218300.v1.1 MD16G1218400.v1.1 MD16G1218600.v1.1 MD16G1218700.v1.1 MD17G1102900.v1.1
prunus_persica Prupe.1G024400_v2.0.a1 Prupe.1G024500_v2.0.a1 Prupe.1G024600_v2.0.a1 Prupe.1G024800_v2.0.a1 Prupe.1G025300_v2.0.a1 Prupe.1G025400_v2.0.a1 Prupe.1G556300_v2.0.a1 Prupe.3G094100_v2.0.a1 Prupe.3G094200_v2.0.a1
pyrus_communis pycom02g22350 pycom05g27240 pycom07g04530 pycom07g04540 pycom08g06570 pycom10g07370 pycom16g17130 pycom16g17140 pycom16g17150 pycom16g17160 pycom16g17180 pycom17g09720
rosa_chinensis RchiOBHm_Chr6g0294901 RchiOBHm_Chr7g0179991 RchiOBHm_Chr7g0180101 RchiOBHm_Chr7g0180241
rosa_laevigata RLG00000005281 RLG00000005282 RLG00000005293 RLG00000005304 RLG00000011829 RLG00000011831 RLG00000011832 RLG00000021887
rosa_multiflora Rmu_co8519977.1_g000001 Rmu_sc0008966.1_g000002 Rmu_sc0008966.1_g000003 Rmu_sc0008966.1_g000008 Rmu_sc0011963.1_g000010 Rmu_ssc0000119.1_g000012 Rmu_ssc0000119.1_g000032
rosa_roxburghii Rroxscaffold_2G00081970 Rroxscaffold_2G00081980 Rroxscaffold_3G00273030 Rroxscaffold_3G00273250 Rroxscaffold_7G00172880 Rroxscaffold_7G00172900
rosa_rugosa Rorug02G0541400 Rorug06G0429600
rosa_samantha Rh2AG613800 Rh2CG595200 Rh2CG595300 Rh6AG361300 Rh6BG368000 Rh6BG368100 Rh6BG368300 Rh6BG368500 Rh6BG368600 Rh6CG375200 Rh6CG375300 Rh7AG030100 Rh7AG031000 Rh7AG032000 Rh7BG029400 Rh7BG029500 Rh7BG032100 Rh7CG031100 Rh7CG032700 Rh7CG032800 Rh7CG033900 Rh7DG030400 Rh7DG032400
rosa_wichuraiana Rw7G002420 Rw7G002670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 540, 1902
Acc36I ACCTGC 1 cut(s) 1681
Acc65I GGTACC 1 cut(s) 202
AccB1I GGYRCC 1 cut(s) 202
AccBSI CCGCTC 1 cut(s) 246
AccI GTMKAC 1 cut(s) 1695
AciI CCGC 6 cut(s) 114, 151, 244, 321, 417, 701
AclWI GGATC 7 cut(s) 460, 488, 1415, 1428, 1659, 1720, 1733
AcoI YGGCCR 5 cut(s) 458, 698, 736, 1374, 2202
AcsI RAATTY 3 cut(s) 964, 998, 1625
AcuI CTGAAG 3 cut(s) 223, 1543, 1890
AcyI GRCGYC 1 cut(s) 105
AfaI GTAC 3 cut(s) 204, 793, 1449
AfiI CCNNNNNNNGG 8 cut(s) 332, 475, 533, 616, 745, 1372, 1776, 2052
AflIII ACRYGT 2 cut(s) 2218, 2235
AhlI ACTAGT 1 cut(s) 794
AjiI CACGTC 1 cut(s) 1257
AjnI CCWGG 2 cut(s) 532, 2010
AjuI GAANNNNNNNTTGG 2 cut(s) 2208, 2240
AluBI AGCT 3 cut(s) 430, 588, 2284
AluI AGCT 3 cut(s) 430, 588, 2284
Alw26I GTCTC 2 cut(s) 293, 347
AlwI GGATC 7 cut(s) 460, 488, 1415, 1428, 1659, 1720, 1733
AlwNI CAGNNNCTG 2 cut(s) 407, 1953
AoxI GGCC 8 cut(s) 458, 477, 698, 736, 747, 1374, 1476, 2202
ApeKI GCWGC 2 cut(s) 131, 1352
ApoI RAATTY 3 cut(s) 964, 998, 1625
Asp700I GAANNNNTTC 1 cut(s) 2162
Asp718I GGTACC 1 cut(s) 202
AspLEI GCGC 1 cut(s) 37
AspS9I GGNCC 2 cut(s) 367, 747
AsuC2I CCSGG 2 cut(s) 476, 740
AsuHPI GGTGA 6 cut(s) 372, 536, 773, 851, 1000, 1835
AvaII GGWCC 1 cut(s) 367
BaeGI GKGCMC 1 cut(s) 64
BalI TGGCCA 2 cut(s) 1376, 2204
BamHI GGATCC 2 cut(s) 1420, 1725
BanI GGYRCC 1 cut(s) 202
BbsI GAAGAC 1 cut(s) 1506
BbvI GCAGC 2 cut(s) 143, 1339
BccI CCATC 6 cut(s) 406, 830, 1364, 1398, 1406, 1415
BceAI ACGGC 3 cut(s) 64, 560, 734
BciT130I CCWGG 2 cut(s) 534, 2012
BclI TGATCA 1 cut(s) 1167
BcnI CCSGG 2 cut(s) 476, 740
BcoDI GTCTC 2 cut(s) 293, 347
BcuI ACTAGT 1 cut(s) 794
BfaI CTAG 1 cut(s) 795
BfmI CTRYAG 2 cut(s) 1696, 1773
BfuAI ACCTGC 1 cut(s) 1681
BglI GCCNNNNNGGC 1 cut(s) 1251
BisI GCNGC 5 cut(s) 132, 151, 244, 701, 1353
BlsI GCNGC 5 cut(s) 133, 152, 245, 702, 1354
Bme1390I CCNGG 4 cut(s) 476, 534, 740, 2012
Bme18I GGWCC 1 cut(s) 367
BmgBI CACGTC 1 cut(s) 1257
BmgT120I GGNCC 2 cut(s) 367, 747
BmiI GGNNCC 4 cut(s) 204, 369, 1422, 1727
BmrFI CCNGG 4 cut(s) 476, 534, 740, 2012
BmsI GCATC 5 cut(s) 1014, 1393, 1474, 2005, 2100
BpiI GAAGAC 1 cut(s) 1506
BpmI CTGGAG 1 cut(s) 1110
BpuEI CTTGAG 2 cut(s) 182, 369
BpuMI CCSGG 2 cut(s) 476, 740
BsaAI YACGTR 2 cut(s) 625, 1820
BsaBI GATNNNNATC 1 cut(s) 1656
BsaHI GRCGYC 1 cut(s) 105
BsaI GGTCTC 1 cut(s) 293
BsaJI CCNNGG 6 cut(s) 474, 739, 750, 1308, 1479, 2073
BsaWI WCCGGW 2 cut(s) 205, 546
BsaXI ACNNNNNCTCC 4 cut(s) 878, 908, 1371, 1401
Bsc4I CCNNNNNNNGG 8 cut(s) 332, 475, 533, 616, 745, 1372, 1776, 2052
Bse118I RCCGGY 1 cut(s) 166
Bse1I ACTGG 3 cut(s) 154, 991, 1886
Bse8I GATNNNNATC 1 cut(s) 1656
BseBI CCWGG 2 cut(s) 534, 2012
BseDI CCNNGG 6 cut(s) 474, 739, 750, 1308, 1479, 2073
BseGI GGATG 8 cut(s) 317, 841, 1263, 1287, 1356, 1489, 1845, 2020
BseJI GATNNNNATC 1 cut(s) 1656
BseLI CCNNNNNNNGG 8 cut(s) 332, 475, 533, 616, 745, 1372, 1776, 2052
BseMII CTCAG 1 cut(s) 2109
BseNI ACTGG 3 cut(s) 154, 991, 1886
BseRI GAGGAG 2 cut(s) 132, 1050
BseSI GKGCMC 1 cut(s) 64
BseX3I CGGCCG 1 cut(s) 736
BseXI GCAGC 2 cut(s) 143, 1339
BsgI GTGCAG 2 cut(s) 1709, 1941
Bsh1285I CGRYCG 1 cut(s) 739
BshFI GGCC 8 cut(s) 460, 479, 700, 738, 749, 1376, 1478, 2204
BshNI GGYRCC 1 cut(s) 202
BsiEI CGRYCG 1 cut(s) 739
BsiSI CCGG 6 cut(s) 167, 206, 461, 476, 547, 739
BslFI GGGAC 2 cut(s) 353, 913
BslI CCNNNNNNNGG 8 cut(s) 332, 475, 533, 616, 745, 1372, 1776, 2052
BsmAI GTCTC 2 cut(s) 293, 347
BsmBI CGTCTC 1 cut(s) 347
BsmFI GGGAC 2 cut(s) 353, 913
BsmI GAATGC 6 cut(s) 37, 211, 458, 629, 806, 1354
BsnI GGCC 8 cut(s) 460, 479, 700, 738, 749, 1376, 1478, 2204
Bso31I GGTCTC 1 cut(s) 293
Bsp1286I GDGCHC 1 cut(s) 64
Bsp1407I TGTACA 1 cut(s) 1447
Bsp143I GATC 9 cut(s) 125, 465, 493, 1167, 1278, 1420, 1651, 1725, 2005
BspACI CCGC 6 cut(s) 114, 151, 244, 321, 417, 701
BspANI GGCC 8 cut(s) 460, 479, 700, 738, 749, 1376, 1478, 2204
BspCNI CTCAG 1 cut(s) 2110
BspLI GGNNCC 4 cut(s) 204, 369, 1422, 1727
BspMI ACCTGC 1 cut(s) 1681
BspPI GGATC 7 cut(s) 460, 488, 1415, 1428, 1659, 1720, 1733
BspT107I GGYRCC 1 cut(s) 202
BspTNI GGTCTC 1 cut(s) 293
BsrBI CCGCTC 1 cut(s) 246
BsrFI RCCGGY 1 cut(s) 166
BsrGI TGTACA 1 cut(s) 1447
BsrI ACTGG 3 cut(s) 154, 991, 1886
BssAI RCCGGY 1 cut(s) 166
BssECI CCNNGG 6 cut(s) 474, 739, 750, 1308, 1479, 2073
BssMI GATC 9 cut(s) 125, 465, 493, 1167, 1278, 1420, 1651, 1725, 2005
BssNI GRCGYC 1 cut(s) 105
BssT1I CCWWGG 3 cut(s) 1308, 1479, 2073
Bst2UI CCWGG 2 cut(s) 534, 2012
Bst4CI ACNGT 8 cut(s) 409, 977, 1644, 1700, 1793, 1955, 2082, 2300
Bst6I CTCTTC 4 cut(s) 602, 1152, 1568, 1866
BstACI GRCGYC 1 cut(s) 105
BstAPI GCANNNNNTGC 1 cut(s) 1349
BstAUI TGTACA 1 cut(s) 1447
BstBAI YACGTR 2 cut(s) 625, 1820
BstC8I GCNNGC 3 cut(s) 458, 1740, 2102
BstDEI CTNAG 2 cut(s) 2118, 2267
BstDSI CCRYGG 1 cut(s) 750
BstENI CCTNNNNNAGG 1 cut(s) 531
BstF5I GGATG 8 cut(s) 317, 841, 1263, 1287, 1356, 1489, 1845, 2020
BstHHI GCGC 1 cut(s) 37
BstKTI GATC 9 cut(s) 128, 468, 496, 1170, 1281, 1423, 1654, 1728, 2008
BstMAI GTCTC 2 cut(s) 293, 347
BstMBI GATC 9 cut(s) 125, 465, 493, 1167, 1278, 1420, 1651, 1725, 2005
BstMCI CGRYCG 1 cut(s) 739
BstMWI GCNNNNNNNGC 7 cut(s) 111, 243, 1251, 1349, 1484, 2110, 2281
BstNI CCWGG 2 cut(s) 534, 2012
BstSCI CCNGG 4 cut(s) 474, 532, 738, 2010
BstSFI CTRYAG 2 cut(s) 1696, 1773
BstSLI GKGCMC 1 cut(s) 64
BstV1I GCAGC 2 cut(s) 143, 1339
BstV2I GAAGAC 1 cut(s) 1506
BstX2I RGATCY 3 cut(s) 465, 1420, 1725
BstXI CCANNNNNNTGG 1 cut(s) 456
BstYI RGATCY 3 cut(s) 465, 1420, 1725
BstZI CGGCCG 1 cut(s) 736
BsuRI GGCC 8 cut(s) 460, 479, 700, 738, 749, 1376, 1478, 2204
BtgI CCRYGG 1 cut(s) 750
BtrI CACGTC 1 cut(s) 1257
BtsCI GGATG 8 cut(s) 317, 841, 1263, 1287, 1356, 1489, 1845, 2020
BtsI GCAGTG 1 cut(s) 1479
BtsIMutI CAGTG 3 cut(s) 1479, 1879, 1951
BveI ACCTGC 1 cut(s) 1681
Cac8I GCNNGC 3 cut(s) 458, 1740, 2102
CaiI CAGNNNCTG 2 cut(s) 407, 1953
CfoI GCGC 1 cut(s) 37
Cfr10I RCCGGY 1 cut(s) 166
Cfr13I GGNCC 2 cut(s) 367, 747
CseI GACGC 1 cut(s) 94
Csp6I GTAC 3 cut(s) 203, 792, 1448
CspCI CAANNNNNGTGG 2 cut(s) 1257, 1292
CviAII CATG 8 cut(s) 683, 789, 1183, 1327, 1344, 1716, 1911, 2052
CviQI GTAC 3 cut(s) 203, 792, 1448
DdeI CTNAG 2 cut(s) 2118, 2267
DpnI GATC 9 cut(s) 127, 467, 495, 1169, 1280, 1422, 1653, 1727, 2007
DpnII GATC 9 cut(s) 125, 465, 493, 1167, 1278, 1420, 1651, 1725, 2005
EaeI YGGCCR 5 cut(s) 458, 698, 736, 1374, 2202
EagI CGGCCG 1 cut(s) 736
Eam1104I CTCTTC 4 cut(s) 602, 1152, 1568, 1866
EarI CTCTTC 4 cut(s) 602, 1152, 1568, 1866
EciI GGCGGA 2 cut(s) 129, 406
EclXI CGGCCG 1 cut(s) 736
Eco130I CCWWGG 3 cut(s) 1308, 1479, 2073
Eco31I GGTCTC 1 cut(s) 293
Eco47I GGWCC 1 cut(s) 367
Eco52I CGGCCG 1 cut(s) 736
Eco57I CTGAAG 3 cut(s) 223, 1543, 1890
EcoNI CCTNNNNNAGG 1 cut(s) 531
EcoRII CCWGG 2 cut(s) 532, 2010
EcoT14I CCWWGG 3 cut(s) 1308, 1479, 2073
EcoT22I ATGCAT 2 cut(s) 291, 1222
ErhI CCWWGG 3 cut(s) 1308, 1479, 2073
Esp3I CGTCTC 1 cut(s) 347
FaeI CATG 8 cut(s) 686, 792, 1186, 1330, 1347, 1719, 1914, 2055
FalI AAGNNNNNCTT 2 cut(s) 1532, 1564
FaqI GGGAC 2 cut(s) 353, 913
FatI CATG 8 cut(s) 682, 788, 1182, 1326, 1343, 1715, 1910, 2051
FbaI TGATCA 1 cut(s) 1167
FblI GTMKAC 1 cut(s) 1695
Fnu4HI GCNGC 5 cut(s) 132, 151, 244, 701, 1353
FokI GGATG 8 cut(s) 304, 848, 1250, 1274, 1343, 1496, 1852, 2027
Fsp4HI GCNGC 5 cut(s) 132, 151, 244, 701, 1353
FspBI CTAG 1 cut(s) 795
GlaI GCGC 1 cut(s) 36
GluI GCNGC 5 cut(s) 132, 151, 244, 701, 1353
GsuI CTGGAG 1 cut(s) 1110
HaeIII GGCC 8 cut(s) 460, 479, 700, 738, 749, 1376, 1478, 2204
HapII CCGG 6 cut(s) 167, 206, 461, 476, 547, 739
HgaI GACGC 1 cut(s) 94
HhaI GCGC 1 cut(s) 37
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 8 cut(s) 686, 792, 1186, 1330, 1347, 1719, 1914, 2055
Hin6I GCGC 1 cut(s) 35
HinP1I GCGC 1 cut(s) 35
HincII GTYRAC 4 cut(s) 1135, 1305, 1612, 1789
HindII GTYRAC 4 cut(s) 1135, 1305, 1612, 1789
HindIII AAGCTT 1 cut(s) 428
HpaI GTTAAC 1 cut(s) 1612
HpaII CCGG 6 cut(s) 167, 206, 461, 476, 547, 739
HphI GGTGA 6 cut(s) 372, 536, 773, 851, 1000, 1835
Hpy166II GTNNAC 7 cut(s) 1081, 1135, 1305, 1569, 1612, 1696, 1789
Hpy188I TCNGA 7 cut(s) 43, 1261, 1459, 1662, 1684, 2086, 2119
Hpy188III TCNNGA 7 cut(s) 449, 995, 1051, 1127, 1402, 1537, 1570
Hpy8I GTNNAC 7 cut(s) 1081, 1135, 1305, 1569, 1612, 1696, 1789
Hpy99I CGWCG 2 cut(s) 110, 1619
HpyAV CCTTC 9 cut(s) 83, 859, 911, 1025, 1035, 1567, 1865, 2023, 2267
HpyCH4III ACNGT 8 cut(s) 409, 977, 1644, 1700, 1793, 1955, 2082, 2300
HpyCH4IV ACGT 8 cut(s) 624, 1013, 1256, 1819, 2151, 2191, 2218, 2237
HpyF10VI GCNNNNNNNGC 7 cut(s) 111, 243, 1251, 1349, 1484, 2110, 2281
HpyF3I CTNAG 2 cut(s) 2118, 2267
HpySE526I ACGT 8 cut(s) 624, 1013, 1256, 1819, 2151, 2191, 2218, 2237
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 8 cut(s) 686, 792, 1186, 1330, 1347, 1719, 1914, 2055
HspAI GCGC 1 cut(s) 35
KpnI GGTACC 1 cut(s) 206
Ksp22I TGATCA 1 cut(s) 1167
KspAI GTTAAC 1 cut(s) 1612
Kzo9I GATC 9 cut(s) 125, 465, 493, 1167, 1278, 1420, 1651, 1725, 2005
LmnI GCTCC 2 cut(s) 208, 251
Lsp1109I GCAGC 2 cut(s) 143, 1339
LweI GCATC 5 cut(s) 1014, 1393, 1474, 2005, 2100
MaeI CTAG 1 cut(s) 795
MaeII ACGT 8 cut(s) 624, 1013, 1256, 1819, 2151, 2191, 2218, 2237
MaeIII GTNAC 8 cut(s) 156, 378, 637, 664, 844, 1112, 1672, 2300
MalI GATC 9 cut(s) 127, 467, 495, 1169, 1280, 1422, 1653, 1727, 2007
MbiI CCGCTC 1 cut(s) 246
MboI GATC 9 cut(s) 125, 465, 493, 1167, 1278, 1420, 1651, 1725, 2005
MfeI CAATTG 1 cut(s) 1370
MflI RGATCY 3 cut(s) 465, 1420, 1725
MhlI GDGCHC 1 cut(s) 64
MlsI TGGCCA 2 cut(s) 1376, 2204
MluNI TGGCCA 2 cut(s) 1376, 2204
MlyI GAGTC 2 cut(s) 1085, 1117
MmeI TCCRAC 2 cut(s) 106, 1544
Mox20I TGGCCA 2 cut(s) 1376, 2204
Mph1103I ATGCAT 2 cut(s) 291, 1222
MroXI GAANNNNTTC 1 cut(s) 2162
MscI TGGCCA 2 cut(s) 1376, 2204
MseI TTAA 6 cut(s) 719, 780, 1109, 1611, 1749, 2240
MslI CAYNNNNRTG 2 cut(s) 42, 1662
Msp20I TGGCCA 2 cut(s) 1376, 2204
MspI CCGG 6 cut(s) 167, 206, 461, 476, 547, 739
MspR9I CCNGG 4 cut(s) 476, 534, 740, 2012
MunI CAATTG 1 cut(s) 1370
Mva1269I GAATGC 6 cut(s) 37, 211, 458, 629, 806, 1354
MvaI CCWGG 2 cut(s) 534, 2012
MwoI GCNNNNNNNGC 7 cut(s) 111, 243, 1251, 1349, 1484, 2110, 2281
NciI CCSGG 2 cut(s) 476, 740
NdeII GATC 9 cut(s) 125, 465, 493, 1167, 1278, 1420, 1651, 1725, 2005
NlaIII CATG 8 cut(s) 686, 792, 1186, 1330, 1347, 1719, 1914, 2055
NlaIV GGNNCC 4 cut(s) 204, 369, 1422, 1727
NmuCI GTSAC 3 cut(s) 378, 637, 664
NsiI ATGCAT 2 cut(s) 291, 1222
PctI GAATGC 6 cut(s) 37, 211, 458, 629, 806, 1354
PdmI GAANNNNTTC 1 cut(s) 2162
PfoI TCCNGGA 1 cut(s) 2010
PkrI GCNGC 5 cut(s) 133, 152, 245, 702, 1354
PleI GAGTC 2 cut(s) 1085, 1117
PpsI GAGTC 2 cut(s) 1085, 1117
Ppu21I YACGTR 2 cut(s) 625, 1820
PsiI TTATAA 2 cut(s) 540, 1902
Psp6I CCWGG 2 cut(s) 532, 2010
PspGI CCWGG 2 cut(s) 532, 2010
PspN4I GGNNCC 4 cut(s) 204, 369, 1422, 1727
PspPI GGNCC 2 cut(s) 367, 747
PstNI CAGNNNCTG 2 cut(s) 407, 1953
PsuI RGATCY 3 cut(s) 465, 1420, 1725
RsaI GTAC 3 cut(s) 204, 793, 1449
RsaNI GTAC 3 cut(s) 203, 792, 1448
RseI CAYNNNNRTG 2 cut(s) 42, 1662
SaqAI TTAA 6 cut(s) 719, 780, 1109, 1611, 1749, 2240
SatI GCNGC 5 cut(s) 132, 151, 244, 701, 1353
Sau3AI GATC 9 cut(s) 125, 465, 493, 1167, 1278, 1420, 1651, 1725, 2005
Sau96I GGNCC 2 cut(s) 367, 747
SchI GAGTC 2 cut(s) 1085, 1117
ScrFI CCNGG 4 cut(s) 476, 534, 740, 2012
SduI GDGCHC 1 cut(s) 64
SfaNI GCATC 5 cut(s) 1014, 1393, 1474, 2005, 2100
SfcI CTRYAG 2 cut(s) 1696, 1773
SinI GGWCC 1 cut(s) 367
SmiMI CAYNNNNRTG 2 cut(s) 42, 1662
SmlI CTYRAG 2 cut(s) 161, 384
SmoI CTYRAG 2 cut(s) 161, 384
SpeI ACTAGT 1 cut(s) 794
SsiI CCGC 6 cut(s) 114, 151, 244, 321, 417, 701
SspMI CTAG 1 cut(s) 795
StyD4I CCNGG 4 cut(s) 474, 532, 738, 2010
StyI CCWWGG 3 cut(s) 1308, 1479, 2073
TaaI ACNGT 8 cut(s) 409, 977, 1644, 1700, 1793, 1955, 2082, 2300
TaiI ACGT 8 cut(s) 627, 1016, 1259, 1822, 2154, 2194, 2221, 2240
TaqI TCGA 2 cut(s) 1029, 1993
TatI WGTACW 2 cut(s) 791, 1447
TauI GCSGC 3 cut(s) 153, 246, 703
Tru1I TTAA 6 cut(s) 719, 780, 1109, 1611, 1749, 2240
Tru9I TTAA 6 cut(s) 719, 780, 1109, 1611, 1749, 2240
TscAI CASTG 3 cut(s) 1479, 1886, 1958
TseFI GTSAC 3 cut(s) 378, 637, 664
TseI GCWGC 2 cut(s) 131, 1352
Tsp45I GTSAC 3 cut(s) 378, 637, 664
TspGWI ACGGA 3 cut(s) 365, 859, 1605
TspRI CASTG 3 cut(s) 1479, 1886, 1958
VpaK11BI GGWCC 1 cut(s) 367
XagI CCTNNNNNAGG 1 cut(s) 531
XapI RAATTY 3 cut(s) 964, 998, 1625
XcmI CCANNNNNNNNNTGG 1 cut(s) 1414
XmiI GTMKAC 1 cut(s) 1695
XmnI GAANNNNTTC 1 cut(s) 2162
XspI CTAG 1 cut(s) 795
Zsp2I ATGCAT 2 cut(s) 291, 1222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.