Rh7CG033900

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000424
Physical Location & Seq
Forward (+)
2314646 .. 2317899
3254 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG033900.1

Sequence Viewer

Length: 2289 bp
ATGGAAGAAGGGAAAGCCAAGTCTTTATTTGTGATGGCGCATTCTGGTCACAGCTCCTATAGCTCGCTGTATGAGGTGAAAATCCAACCAGGAGGACAAGTCATAGGCGGCGGTGGAGAATGTAGCAACCGTCGTAAGAGGAGGAGTTCTAGGCGTCGTAGGGTTCTGCTACTTGAGCCTGTGGTAGAAAGGTTACCAGAGCATTCACACTTGGGAACTGCCAGGTTTTTCAGCGGCTCCAAACTATACTTGTTCCCAAACAAAACTACTCGGAGTACCTCAAAACCGCCCTATGCATATGTCTTCGACACGGAGACAAAGTCATTGGTCCCATTTAACTCTTCACCTCAAGCTCATAAGCCTTATGCAACTGTTGTTTCCGCCTATGGCAAGCTTTATCATCTTGCTACCAATCCACATTGCTGGCCGGAGATCCCAACTCCGGCCTTTGAGCGATATGATCCTGCCACTAATTGTTGGAAGTCGCTCCCTCCTTGTCCGGCCAGGCCAAGGAAGATACTAGGCTATGCCGTTTGTTATGGCTTTATTCTGTTCTCACTTGACGACGACTCCTTCATGGCTTTTGATGTCACCAGAAAACAATGGCATGAAGTCCAACTGTGGCAGCCTGCTTCTGGTGATCATCGGTTCAGTGGGAGGGCTGTGGTTGTAGGTGACACTATCTATACCTTTAAGATTTCGAGTAATAGTGTTGTTGCATACAACTTTTGGTGGGATTTAGATCAGGAAGGTGACGTTACATTTTATATAAGCCCTCAACCCGATTTGGAAGGCTTGCATATCAACAAGGCCTTTCTGGTGCAAACAGGTCGTTATAAGTTTACAGAAACTAGACAAGGATTTTTGGTTCACTTGGGAAACTTGGATTTTTGTCTTGTCCAAAATCGGTTCAAAAAACATAGAGCTGATCGTGAACAGAAACTCTGTATCACCACGTTTCAAGTTGTGGTCGACGATGAACGGGGAGGGAAGCATATCATCAAGACCTTACATTCAACTTTCTGTGAGGTGGACTCCCTCATTCGTTTGGGTTTCAGCTTTACTCCAGATTGTGATGATTTTGAACCCACAGAAGAGGAAATGAGAGTGAAAAAACAAGCTGCAACATTGAGTAACCTTGCTGATTTCGATGCAAATGAATTCGGCATGTCACACACTATCCCACAAGAGCTAATCTTTGACATACTTGCAAGGCTTTCGACCAAGGATTTGATACGACTCATGTGTGTTTCCAAAGCATGGAATGCAGCCATCCAAGACCCAGAATGGGCCAAGCTGCATCTCCAGCTCTCCATCAAGCGCAATTCTTTGGATCCTACCTTTTTAATTCTACCATCTGAGCTTGATGAGTTTTTTACAATGACCTTGTTCGACAATGGCACAAAGGGAAGACTTGTGTTAATCAAGCAGCAGTCAAAGCAGGTTGAGAAAAGAAATAAGATCTTGGGCTGCAGCAATGGTTTGCTTTGCATTTACGAATCTATGGAAAATGAAGACTTTGGTTTGTGGAATCCGACAGTCCACAAGTTTAAGAGGATTCCTTTGTCAGCCTTCAATAAGTGGACGCAGAGCAAGACCTTTTATGGCTTCGGGTATGATTCAGTAAATGATGACTATAAGTTTGTGAAAATGGGACAGTTTAAGGATCCGAGTGGTGTTGTTACAAGCTCGGAAGTGCAGGTTTATAGTCTAAAATTGCACTCATGGAAAAGGGTCCAAGATTTGCCTTCTCATCTTAATAAAGATTATATACTTGCCTCAAATGGGGTTTGTCTGGGTAGTTCCTTACATTGGTTGATGAGATTAGGTGATAAAGGTGGAGGACCAATGATAGTTCTATCCCTTGATCTGGCAAGTGAAGAATACCACTGGTTTTCTGCCCCAGCTTGTTATAACAGTGAGCATTTGAGTATCAACTACTTGGATTTGCATGTAATGGCAGGGTTCTTATGCTTTTGTTTCGACACTGATTCCCTCCGGGAGACTTGGATTTTGAAGGAATATGGAGTTACCAAGTCTTGGACCAAGCTTTGTTATTATAACAGATATTGGAGTTGCAATCCTTTGATCTTTTCAAAGTGTGGTAAGAAGATTCTTTTCGCAAGAGTTGCGAAATTGTTTTGGTATGATCTGGAGAACAAGAGAATTGAAAATGTCAGCACTGATATCAGGCCTGTGAGGAGTAGGGCGTTACAGACGGTAACTTCTGTGGAAAACCTTAATCTTCTTAGGAGGCGACCAGAACTACCTTATAATAACTGTCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

762

Amino Acids

87.54

Weight (kDa)

8.73

Isoelectric Point (pI)

49.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 98 - 336 1.6e-12 Protein of unknown function (DUF1668)
F-box-like PF12937 394 - 435 1.4e-09 F-box-like
F-box PF00646 394 - 429 6e-09 F-box domain
FBA_3 PF08268 456 - 689 1.5e-17 F-box associated beta propeller domain
FBA_1 PF07734 475 - 686 8.5e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000424)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32600 AT1G54640
fragaria_vesca FvH4_2g26290 FvH4_2g26290 FvH4_2g26300 FvH4_5g16160 FvH4_6g49561 FvH4_6g49581
malus_domestica MD02G1261500.v1.1 MD02G1290400.v1.1 MD02G1290700.v1.1 MD02G1290800.v1.1 MD05G1183700.v1.1 MD07G1058700.v1.1 MD07G1058900.v1.1 MD07G1059200.v1.1 MD08G1079300.v1.1 MD08G1079600.v1.1 MD16G1218300.v1.1 MD16G1218400.v1.1 MD16G1218600.v1.1 MD16G1218700.v1.1 MD17G1102900.v1.1
prunus_persica Prupe.1G024400_v2.0.a1 Prupe.1G024500_v2.0.a1 Prupe.1G024600_v2.0.a1 Prupe.1G024800_v2.0.a1 Prupe.1G025300_v2.0.a1 Prupe.1G025400_v2.0.a1 Prupe.1G556300_v2.0.a1 Prupe.3G094100_v2.0.a1 Prupe.3G094200_v2.0.a1
pyrus_communis pycom02g22350 pycom05g27240 pycom07g04530 pycom07g04540 pycom08g06570 pycom10g07370 pycom16g17130 pycom16g17140 pycom16g17150 pycom16g17160 pycom16g17180 pycom17g09720
rosa_chinensis RchiOBHm_Chr6g0294901 RchiOBHm_Chr7g0179991 RchiOBHm_Chr7g0180101 RchiOBHm_Chr7g0180241
rosa_laevigata RLG00000005281 RLG00000005282 RLG00000005293 RLG00000005304 RLG00000011829 RLG00000011831 RLG00000011832 RLG00000021887
rosa_multiflora Rmu_co8519977.1_g000001 Rmu_sc0008966.1_g000002 Rmu_sc0008966.1_g000003 Rmu_sc0008966.1_g000008 Rmu_sc0011963.1_g000010 Rmu_ssc0000119.1_g000012 Rmu_ssc0000119.1_g000032
rosa_roxburghii Rroxscaffold_2G00081970 Rroxscaffold_2G00081980 Rroxscaffold_3G00273030 Rroxscaffold_3G00273250 Rroxscaffold_7G00172880 Rroxscaffold_7G00172900
rosa_rugosa Rorug02G0541400 Rorug06G0429600
rosa_samantha Rh2AG613800 Rh2CG595200 Rh2CG595300 Rh6AG361300 Rh6BG368000 Rh6BG368100 Rh6BG368300 Rh6BG368500 Rh6BG368600 Rh6CG375200 Rh6CG375300 Rh7AG030100 Rh7AG031000 Rh7AG032000 Rh7BG029400 Rh7BG029500 Rh7BG032100 Rh7CG031100 Rh7CG032700 Rh7CG032800 Rh7CG033900 Rh7DG030400 Rh7DG032400
rosa_wichuraiana Rw7G002420 Rw7G002670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 837, 1914, 2061, 2274
Acc36I ACCTGC 2 cut(s) 1432, 1690
AccB7I CCANNNNNTGG 2 cut(s) 1260, 2040
AccI GTMKAC 1 cut(s) 972
AciI CCGC 5 cut(s) 108, 111, 234, 287, 381
AclWI GGATC 6 cut(s) 427, 455, 1328, 1341, 1661, 1674
AcoI YGGCCR 2 cut(s) 425, 501
AcsI RAATTY 1 cut(s) 1160
AcyI GRCGYC 1 cut(s) 154
AfaI GTAC 1 cut(s) 277
AfiI CCNNNNNNNGG 9 cut(s) 442, 510, 635, 1260, 1288, 1785, 1812, 1870, 2040
AgsI TTSAA 8 cut(s) 913, 962, 1017, 1085, 1576, 2017, 2097, 2171
AjnI CCWGG 3 cut(s) 88, 221, 503
AloI GAACNNNNNNTCC 2 cut(s) 852, 884
Alw26I GTCTC 2 cut(s) 308, 1997
AlwI GGATC 6 cut(s) 427, 455, 1328, 1341, 1661, 1674
AoxI GGCC 7 cut(s) 425, 444, 501, 506, 810, 1290, 2192
ApeKI GCWGC 7 cut(s) 625, 1121, 1268, 1297, 1429, 1470, 1473
ApoI RAATTY 1 cut(s) 1160
ArsI GACNNNNNNTTYG 6 cut(s) 1213, 1245, 1625, 1657, 1996, 2028
AspLEI GCGC 2 cut(s) 40, 1323
AspS9I GGNCC 5 cut(s) 328, 1290, 1735, 1844, 2043
AsuC2I CCSGG 1 cut(s) 2000
AsuHPI GGTGA 8 cut(s) 88, 336, 583, 650, 686, 764, 943, 1841
AvaII GGWCC 4 cut(s) 328, 1735, 1844, 2043
BamHI GGATCC 2 cut(s) 1333, 1666
BbsI GAAGAC 3 cut(s) 295, 1417, 1521
BbvI GCAGC 7 cut(s) 637, 1108, 1280, 1284, 1441, 1457, 1485
BccI CCATC 4 cut(s) 28, 1280, 1322, 1363
BceAI ACGGC 1 cut(s) 515
BcgI CGANNNNNNTGC 4 cut(s) 812, 846, 1200, 1234
BciT130I CCWGG 3 cut(s) 90, 223, 505
BclI TGATCA 1 cut(s) 640
BcnI CCSGG 1 cut(s) 2000
BcoDI GTCTC 2 cut(s) 308, 1997
BfaI CTAG 3 cut(s) 150, 521, 852
BfmI CTRYAG 2 cut(s) 58, 1471
BfuAI ACCTGC 2 cut(s) 1432, 1690
BglII AGATCT 1 cut(s) 1461
BisI GCNGC 9 cut(s) 109, 235, 626, 1122, 1269, 1298, 1430, 1471, 1474
BlsI GCNGC 9 cut(s) 110, 236, 627, 1123, 1270, 1299, 1431, 1472, 1475
Bme1390I CCNGG 4 cut(s) 90, 223, 505, 2000
Bme18I GGWCC 4 cut(s) 328, 1735, 1844, 2043
BmgT120I GGNCC 5 cut(s) 328, 1290, 1735, 1844, 2043
BmiI GGNNCC 5 cut(s) 238, 330, 1335, 1668, 1736
BmrFI CCNGG 4 cut(s) 90, 223, 505, 2000
BmsI GCATC 2 cut(s) 1141, 1309
BpiI GAAGAC 3 cut(s) 295, 1417, 1521
BplI GAGNNNNNCTC 2 cut(s) 1019, 1051
BpmI CTGGAG 3 cut(s) 1050, 1289, 2174
BpuEI CTTGAG 2 cut(s) 194, 333
BpuMI CCSGG 1 cut(s) 2000
BsaBI GATNNNNATC 1 cut(s) 741
BsaHI GRCGYC 1 cut(s) 154
BsaJI CCNNGG 2 cut(s) 509, 1224
BsaXI ACNNNNNCTCC 6 cut(s) 84, 114, 305, 335, 554, 584
Bsc4I CCNNNNNNNGG 9 cut(s) 442, 510, 635, 1260, 1288, 1785, 1812, 1870, 2040
Bse1I ACTGG 1 cut(s) 1895
Bse3DI GCAATG 2 cut(s) 418, 1483
Bse8I GATNNNNATC 1 cut(s) 741
BseBI CCWGG 3 cut(s) 90, 223, 505
BseDI CCNNGG 2 cut(s) 509, 1224
BseGI GGATG 1 cut(s) 1272
BseJI GATNNNNATC 1 cut(s) 741
BseLI CCNNNNNNNGG 9 cut(s) 442, 510, 635, 1260, 1288, 1785, 1812, 1870, 2040
BseMI GCAATG 2 cut(s) 418, 1483
BseMII CTCAG 1 cut(s) 1350
BseNI ACTGG 1 cut(s) 1895
BseRI GAGGAG 3 cut(s) 154, 157, 2215
BseXI GCAGC 7 cut(s) 637, 1108, 1280, 1284, 1441, 1457, 1485
BseYI CCCAGC 1 cut(s) 1903
BsgI GTGCAG 1 cut(s) 1718
BshFI GGCC 7 cut(s) 427, 446, 503, 508, 812, 1292, 2194
BsiSI CCGG 4 cut(s) 428, 443, 500, 1999
BslFI GGGAC 2 cut(s) 314, 1668
BslI CCNNNNNNNGG 9 cut(s) 442, 510, 635, 1260, 1288, 1785, 1812, 1870, 2040
BsmAI GTCTC 2 cut(s) 308, 1997
BsmFI GGGAC 2 cut(s) 314, 1668
BsmI GAATGC 3 cut(s) 40, 202, 1270
BsnI GGCC 7 cut(s) 427, 446, 503, 508, 812, 1292, 2194
BspACI CCGC 5 cut(s) 108, 111, 234, 287, 381
BspANI GGCC 7 cut(s) 427, 446, 503, 508, 812, 1292, 2194
BspCNI CTCAG 1 cut(s) 1351
BspLI GGNNCC 5 cut(s) 238, 330, 1335, 1668, 1736
BspMAI CTGCAG 1 cut(s) 1475
BspMI ACCTGC 2 cut(s) 1432, 1690
BspPI GGATC 6 cut(s) 427, 455, 1328, 1341, 1661, 1674
BsrDI GCAATG 2 cut(s) 418, 1483
BsrI ACTGG 1 cut(s) 1895
BssECI CCNNGG 2 cut(s) 509, 1224
BssNI GRCGYC 1 cut(s) 154
BssT1I CCWWGG 2 cut(s) 509, 1224
Bst2UI CCWGG 3 cut(s) 90, 223, 505
Bst4CI ACNGT 8 cut(s) 131, 373, 621, 1540, 1659, 1919, 2221, 2282
Bst6I CTCTTC 2 cut(s) 346, 1089
BstACI GRCGYC 1 cut(s) 154
BstAPI GCANNNNNTGC 2 cut(s) 1265, 2129
BstC8I GCNNGC 5 cut(s) 65, 392, 425, 630, 797
BstDEI CTNAG 2 cut(s) 1359, 2249
BstEII GGTNACC 1 cut(s) 192
BstF5I GGATG 1 cut(s) 1272
BstHHI GCGC 2 cut(s) 40, 1323
BstMAI GTCTC 2 cut(s) 308, 1997
BstMWI GCNNNNNNNGC 6 cut(s) 60, 175, 1265, 1306, 1438, 2129
BstNI CCWGG 3 cut(s) 90, 223, 505
BstNSI RCATGY 2 cut(s) 1171, 1955
BstPI GGTNACC 1 cut(s) 192
BstSCI CCNGG 4 cut(s) 88, 221, 503, 1998
BstSFI CTRYAG 2 cut(s) 58, 1471
BstV1I GCAGC 7 cut(s) 637, 1108, 1280, 1284, 1441, 1457, 1485
BstV2I GAAGAC 3 cut(s) 295, 1417, 1521
BstX2I RGATCY 4 cut(s) 432, 1333, 1461, 1666
BstXI CCANNNNNNTGG 1 cut(s) 423
BstYI RGATCY 4 cut(s) 432, 1333, 1461, 1666
BsuRI GGCC 7 cut(s) 427, 446, 503, 508, 812, 1292, 2194
BtsCI GGATG 1 cut(s) 1272
BtsIMutI CAGTG 5 cut(s) 658, 1888, 1924, 1986, 2181
BveI ACCTGC 2 cut(s) 1432, 1690
Cac8I GCNNGC 5 cut(s) 65, 392, 425, 630, 797
CfoI GCGC 2 cut(s) 40, 1323
Cfr13I GGNCC 5 cut(s) 328, 1290, 1735, 1844, 2043
CseI GACGC 2 cut(s) 143, 1594
Csp6I GTAC 1 cut(s) 276
CviAII CATG 7 cut(s) 577, 608, 1168, 1243, 1260, 1725, 1952
CviQI GTAC 1 cut(s) 276
DdeI CTNAG 2 cut(s) 1359, 2249
EaeI YGGCCR 2 cut(s) 425, 501
Eam1104I CTCTTC 2 cut(s) 346, 1089
EarI CTCTTC 2 cut(s) 346, 1089
EciI GGCGGA 1 cut(s) 370
Eco130I CCWWGG 2 cut(s) 509, 1224
Eco147I AGGCCT 2 cut(s) 812, 2194
Eco32I GATATC 1 cut(s) 2188
Eco47I GGWCC 4 cut(s) 328, 1735, 1844, 2043
Eco91I GGTNACC 1 cut(s) 192
EcoO65I GGTNACC 1 cut(s) 192
EcoRI GAATTC 1 cut(s) 1160
EcoRII CCWGG 3 cut(s) 88, 221, 503
EcoRV GATATC 1 cut(s) 2188
EcoT14I CCWWGG 2 cut(s) 509, 1224
EcoT22I ATGCAT 1 cut(s) 298
ErhI CCWWGG 2 cut(s) 509, 1224
FaeI CATG 7 cut(s) 580, 611, 1171, 1246, 1263, 1728, 1955
FaqI GGGAC 2 cut(s) 314, 1668
FatI CATG 7 cut(s) 576, 607, 1167, 1242, 1259, 1724, 1951
FauNDI CATATG 1 cut(s) 298
FbaI TGATCA 1 cut(s) 640
FblI GTMKAC 1 cut(s) 972
Fnu4HI GCNGC 9 cut(s) 109, 235, 626, 1122, 1269, 1298, 1430, 1471, 1474
FokI GGATG 1 cut(s) 1259
Fsp4HI GCNGC 9 cut(s) 109, 235, 626, 1122, 1269, 1298, 1430, 1471, 1474
FspBI CTAG 3 cut(s) 150, 521, 852
GlaI GCGC 2 cut(s) 39, 1322
GluI GCNGC 9 cut(s) 109, 235, 626, 1122, 1269, 1298, 1430, 1471, 1474
GsaI CCCAGC 1 cut(s) 1907
GsuI CTGGAG 3 cut(s) 1050, 1289, 2174
HaeIII GGCC 7 cut(s) 427, 446, 503, 508, 812, 1292, 2194
HapII CCGG 4 cut(s) 428, 443, 500, 1999
HgaI GACGC 2 cut(s) 143, 1594
HhaI GCGC 2 cut(s) 40, 1323
Hin1I GRCGYC 1 cut(s) 154
Hin1II CATG 7 cut(s) 580, 611, 1171, 1246, 1263, 1728, 1955
Hin6I GCGC 2 cut(s) 38, 1321
HinP1I GCGC 2 cut(s) 38, 1321
HincII GTYRAC 1 cut(s) 973
HindII GTYRAC 1 cut(s) 973
HindIII AAGCTT 2 cut(s) 392, 2048
HinfI GANTC 9 cut(s) 569, 1034, 1239, 1499, 1531, 1558, 1619, 1991, 2113
HpaII CCGG 4 cut(s) 428, 443, 500, 1999
HphI GGTGA 8 cut(s) 88, 336, 583, 650, 686, 764, 943, 1841
Hpy166II GTNNAC 7 cut(s) 843, 871, 935, 973, 1033, 1543, 1584
Hpy188I TCNGA 5 cut(s) 273, 1360, 1536, 1671, 1693
Hpy188III TCNNGA 5 cut(s) 746, 932, 1003, 1067, 2153
Hpy8I GTNNAC 7 cut(s) 843, 871, 935, 973, 1033, 1543, 1584
Hpy99I CGWCG 4 cut(s) 135, 159, 569, 977
HpyAV CCTTC 6 cut(s) 583, 743, 785, 1582, 1758, 2011
HpyCH4III ACNGT 8 cut(s) 131, 373, 621, 1540, 1659, 1919, 2221, 2282
HpyCH4IV ACGT 2 cut(s) 756, 956
HpyF10VI GCNNNNNNNGC 6 cut(s) 60, 175, 1265, 1306, 1438, 2129
HpyF3I CTNAG 2 cut(s) 1359, 2249
HpySE526I ACGT 2 cut(s) 756, 956
Hsp92I GRCGYC 1 cut(s) 154
Hsp92II CATG 7 cut(s) 580, 611, 1171, 1246, 1263, 1728, 1955
HspAI GCGC 2 cut(s) 38, 1321
Ksp22I TGATCA 1 cut(s) 640
LmnI GCTCC 3 cut(s) 59, 242, 492
Lsp1109I GCAGC 7 cut(s) 637, 1108, 1280, 1284, 1441, 1457, 1485
LweI GCATC 2 cut(s) 1141, 1309
MaeI CTAG 3 cut(s) 150, 521, 852
MaeII ACGT 2 cut(s) 756, 956
MflI RGATCY 4 cut(s) 432, 1333, 1461, 1666
MluCI AATT 7 cut(s) 472, 1160, 1324, 1347, 1715, 2135, 2166
MlyI GAGTC 3 cut(s) 563, 1028, 1233
MmeI TCCRAC 4 cut(s) 109, 458, 640, 1559
Mph1103I ATGCAT 1 cut(s) 298
MseI TTAA 8 cut(s) 336, 693, 1346, 1421, 1551, 1662, 1758, 2241
MspA1I CMGCKG 1 cut(s) 234
MspI CCGG 4 cut(s) 428, 443, 500, 1999
MspR9I CCNGG 4 cut(s) 90, 223, 505, 2000
Mva1269I GAATGC 3 cut(s) 40, 202, 1270
MvaI CCWGG 3 cut(s) 90, 223, 505
MwoI GCNNNNNNNGC 6 cut(s) 60, 175, 1265, 1306, 1438, 2129
NciI CCSGG 1 cut(s) 2000
NdeI CATATG 1 cut(s) 298
NlaIII CATG 7 cut(s) 580, 611, 1171, 1246, 1263, 1728, 1955
NlaIV GGNNCC 5 cut(s) 238, 330, 1335, 1668, 1736
NmuCI GTSAC 6 cut(s) 47, 589, 674, 752, 1170, 2282
NsiI ATGCAT 1 cut(s) 298
NspI RCATGY 2 cut(s) 1171, 1955
PceI AGGCCT 2 cut(s) 812, 2194
PctI GAATGC 3 cut(s) 40, 202, 1270
PfeI GAWTC 6 cut(s) 1499, 1531, 1558, 1619, 1991, 2113
PflFI GACNNNGTC 1 cut(s) 319
PflMI CCANNNNNTGG 2 cut(s) 1260, 2040
PfoI TCCNGGA 1 cut(s) 1998
PkrI GCNGC 9 cut(s) 110, 236, 627, 1123, 1270, 1299, 1431, 1472, 1475
PleI GAGTC 3 cut(s) 563, 1028, 1233
PpsI GAGTC 3 cut(s) 563, 1028, 1233
PsiI TTATAA 4 cut(s) 837, 1914, 2061, 2274
Psp6I CCWGG 3 cut(s) 88, 221, 503
PspEI GGTNACC 1 cut(s) 192
PspFI CCCAGC 1 cut(s) 1903
PspGI CCWGG 3 cut(s) 88, 221, 503
PspN4I GGNNCC 5 cut(s) 238, 330, 1335, 1668, 1736
PspPI GGNCC 5 cut(s) 328, 1290, 1735, 1844, 2043
PstI CTGCAG 1 cut(s) 1475
PsuI RGATCY 4 cut(s) 432, 1333, 1461, 1666
PsyI GACNNNGTC 1 cut(s) 319
RsaI GTAC 1 cut(s) 277
RsaNI GTAC 1 cut(s) 276
SalI GTCGAC 1 cut(s) 971
SaqAI TTAA 8 cut(s) 336, 693, 1346, 1421, 1551, 1662, 1758, 2241
SatI GCNGC 9 cut(s) 109, 235, 626, 1122, 1269, 1298, 1430, 1471, 1474
Sau96I GGNCC 5 cut(s) 328, 1290, 1735, 1844, 2043
SchI GAGTC 3 cut(s) 563, 1028, 1233
ScrFI CCNGG 4 cut(s) 90, 223, 505, 2000
SfaNI GCATC 2 cut(s) 1141, 1309
SfcI CTRYAG 2 cut(s) 58, 1471
SinI GGWCC 4 cut(s) 328, 1735, 1844, 2043
SmlI CTYRAG 2 cut(s) 173, 348
SmoI CTYRAG 2 cut(s) 173, 348
Sse9I AATT 7 cut(s) 472, 1160, 1324, 1347, 1715, 2135, 2166
SseBI AGGCCT 2 cut(s) 812, 2194
SsiI CCGC 5 cut(s) 108, 111, 234, 287, 381
SspMI CTAG 3 cut(s) 150, 521, 852
StuI AGGCCT 2 cut(s) 812, 2194
StyD4I CCNGG 4 cut(s) 88, 221, 503, 1998
StyI CCWWGG 2 cut(s) 509, 1224
TaaI ACNGT 8 cut(s) 131, 373, 621, 1540, 1659, 1919, 2221, 2282
TaiI ACGT 2 cut(s) 759, 959
TaqI TCGA 7 cut(s) 306, 701, 972, 1149, 1220, 1392, 1983
TasI AATT 7 cut(s) 472, 1160, 1324, 1347, 1715, 2135, 2166
TauI GCSGC 2 cut(s) 111, 237
TfiI GAWTC 6 cut(s) 1499, 1531, 1558, 1619, 1991, 2113
Tru1I TTAA 8 cut(s) 336, 693, 1346, 1421, 1551, 1662, 1758, 2241
Tru9I TTAA 8 cut(s) 336, 693, 1346, 1421, 1551, 1662, 1758, 2241
TscAI CASTG 5 cut(s) 658, 1895, 1924, 1993, 2188
TseFI GTSAC 6 cut(s) 47, 589, 674, 752, 1170, 2282
TseI GCWGC 7 cut(s) 625, 1121, 1268, 1297, 1429, 1470, 1473
Tsp45I GTSAC 6 cut(s) 47, 589, 674, 752, 1170, 2282
TspDTI ATGAA 5 cut(s) 565, 624, 993, 1173, 1527
TspGWI ACGGA 1 cut(s) 326
TspRI CASTG 5 cut(s) 658, 1895, 1924, 1993, 2188
Tth111I GACNNNGTC 1 cut(s) 319
Van91I CCANNNNNTGG 2 cut(s) 1260, 2040
VpaK11BI GGWCC 4 cut(s) 328, 1735, 1844, 2043
XapI RAATTY 1 cut(s) 1160
XceI RCATGY 2 cut(s) 1171, 1955
XmiI GTMKAC 1 cut(s) 972
XspI CTAG 3 cut(s) 150, 521, 852
Zsp2I ATGCAT 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.