Rroxscaffold_3G00273030

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000424
Physical Location & Seq
Reverse (-)
64950657 .. 64952934
2278 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00273030.1

Sequence Viewer

Length: 2127 bp
ATGGAAGAAGGGACAGCCAAGTCTTTATTTGTGATGGCGTATTCTGATCACAGCTCATATAGTTCGCTATATGAGGTGAAAATCCAACCAGGAGGACAAGTCATAGGCGGCGGTGGAGAATGTAGCAACCGTCGTAAGAGGAGGAGTTCTAGGCGTCGTAGGGTTCTGCTACTTGAGACTGTAGCAGCAAGGTTACCGGAGCATTCACATTTGGGAACTGCCAGGTTCTTCAGCCGCTCCAAACTATACTTGTTCCCATACAAAACTACTCGGAGTACCTCAAAACCGCTCTATGCATATGTCTTCGACACGGAGACAAAGTCATTGGTCCCATTTAACTCTTCACCTCAAGCTCATAAGCCTTATGCAACTGTTGTTTCCGCCTATGGCAAGCTTTATCATCTTGCTACCAATCCACATTGCTGGCCGGAGATCCCAACTCCGGCCTTTGAGAGATATGATCCTGCCACTAATTGTTGGGAGTCGCTCCCTCCTTGTCCGTCTAGGCCAAGGAAGATACTAGGCTATGCCGTTTGTTATGGCTTTATTCTGTTCTCACTTGGCGACTCCTTCATGGCTTTTGATGTCACCAGAAAACAATGGCATGAAGTCCAACTGTGGCAGTCAGCTTCTAGTGATCATCGGTTCAGTGGGAGGGCTGTGGTTGTAGGTGACACTATCTATACCTTTAAGATTTCAAGTAATAGTGTTGTTGCATACAACTTTTGGTGGGATTTAGATCAGGAAGGCGATGTTATATTTTATATAAGCCCTCAACCCGATTTGGAAGGCTTGCATATCAACAAGGCCTTTCTGGTGCAAACAGGTCGTTATAAGTTTACAGAAACTAGACAAGGATATTTGGTTCACTTGGGAAACTTGGATTTTTGTCTTGTCCAAAATCGGTTCAAAAAACATAGAGCTGATCGTAAACAGAAACTCTGTATCACCACGTTTCAAGTTGTGGTCGACGATGGATGGGGAGGGAAGCATATCATCAAGACCTTACATTCAACTTTCTGTGAGGTGGACTCCCTCATTCGTTTGGGTTTCAGCTTTACTCCAGATTGTGATGATTTTGAACCCACCGAAGAGGAAAAGAGACATGGAATGCAGCCATCCAAGATCCAGAATGGGCCAAGCTGCATCTCCATCAAGCGCAACTCTTTGGATCCTACCTTTTTGATTCTACCATCTAAGCTTGATGAGTTTTTTACAATGACCTTGTTCGAGAATGGCACAAAGGGAAGACTTGTGTTAATCAAGCAGCAGTCAAAGCAGGTTGAGAAAAGAAATAAGATCTTGGGCTGCAGCAATGGTTTGCTTTGCATTTACGAATCTTTGGAAAATGAAGACTTTGGTTCGTGGAATCCGACAATCCACAAGTTTAAGAGGATTCCTTTGTCAGCCTTCAATAAGTGGACGCAGAGCAAGACCTTTTATGGCTTCGGGTATGATTCAGTCAATGATGACTTTAAGTTTTTGAGAATGGGACAGTTTAAGGATCCGAGTGGTGTTGTTACAAGCTCGGAAGTGCAGGTTTATAGTCTAAAATTGCACTCATGGAAAAGGGTCCAAGACTTGCCTGCTCATCTTAATAAAGACTATATACTTGCCTCAAATGGGGTTTGTCTGGGTATTTCTTTACATTGGTTGATGAGATTAGGTGATAAAGGTGGAGGGCCAATGATAGTTCTATCCCTTGATCTGGCAAGTGAAGAATACCACTGGTTTTCTGCCCCAGCTTGTTATAACAGTGAGCATTTGAGTATCAACTACTTGGATTTGCATGTAATGGCAGGGTTCTTATGCTTTTGTTTCGACACTGATTCCCTCCGGGAGACTTGGATTTTGAAGGAATATGGAGTTACCAAATCTTGGACCAAGCTTTGTTATTATAACAGATATTGGAGTTGCAATCCTTTGATCTTTTCAAAGTGTGGTAAGAAGATTCTTTTCGCTAGAGTTGCGGAATTGTTTTGGTATGATCTGGAGAACAAGAGAATTGAAAATGTCAGCATTGATATCAGGCCTGTGAGGAGTAGGGCGTTACAAACGGTAACTTATGTGGAAAACCTTAATCTTCGTAGGAGGCGACCAGAACTACCTTATAATAACTGTCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

708

Amino Acids

81.59

Weight (kDa)

8.99

Isoelectric Point (pI)

51.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 97 - 334 1.6e-11 Protein of unknown function (DUF1668)
FBA_3 PF08268 400 - 636 2e-16 F-box associated beta propeller domain
FBA_1 PF07734 421 - 632 9.5e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000424)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32600 AT1G54640
fragaria_vesca FvH4_2g26290 FvH4_2g26290 FvH4_2g26300 FvH4_5g16160 FvH4_6g49561 FvH4_6g49581
malus_domestica MD02G1261500.v1.1 MD02G1290400.v1.1 MD02G1290700.v1.1 MD02G1290800.v1.1 MD05G1183700.v1.1 MD07G1058700.v1.1 MD07G1058900.v1.1 MD07G1059200.v1.1 MD08G1079300.v1.1 MD08G1079600.v1.1 MD16G1218300.v1.1 MD16G1218400.v1.1 MD16G1218600.v1.1 MD16G1218700.v1.1 MD17G1102900.v1.1
prunus_persica Prupe.1G024400_v2.0.a1 Prupe.1G024500_v2.0.a1 Prupe.1G024600_v2.0.a1 Prupe.1G024800_v2.0.a1 Prupe.1G025300_v2.0.a1 Prupe.1G025400_v2.0.a1 Prupe.1G556300_v2.0.a1 Prupe.3G094100_v2.0.a1 Prupe.3G094200_v2.0.a1
pyrus_communis pycom02g22350 pycom05g27240 pycom07g04530 pycom07g04540 pycom08g06570 pycom10g07370 pycom16g17130 pycom16g17140 pycom16g17150 pycom16g17160 pycom16g17180 pycom17g09720
rosa_chinensis RchiOBHm_Chr6g0294901 RchiOBHm_Chr7g0179991 RchiOBHm_Chr7g0180101 RchiOBHm_Chr7g0180241
rosa_laevigata RLG00000005281 RLG00000005282 RLG00000005293 RLG00000005304 RLG00000011829 RLG00000011831 RLG00000011832 RLG00000021887
rosa_multiflora Rmu_co8519977.1_g000001 Rmu_sc0008966.1_g000002 Rmu_sc0008966.1_g000003 Rmu_sc0008966.1_g000008 Rmu_sc0011963.1_g000010 Rmu_ssc0000119.1_g000012 Rmu_ssc0000119.1_g000032
rosa_roxburghii Rroxscaffold_2G00081970 Rroxscaffold_2G00081980 Rroxscaffold_3G00273030 Rroxscaffold_3G00273250 Rroxscaffold_7G00172880 Rroxscaffold_7G00172900
rosa_rugosa Rorug02G0541400 Rorug06G0429600
rosa_samantha Rh2AG613800 Rh2CG595200 Rh2CG595300 Rh6AG361300 Rh6BG368000 Rh6BG368100 Rh6BG368300 Rh6BG368500 Rh6BG368600 Rh6CG375200 Rh6CG375300 Rh7AG030100 Rh7AG031000 Rh7AG032000 Rh7BG029400 Rh7BG029500 Rh7BG032100 Rh7CG031100 Rh7CG032700 Rh7CG032800 Rh7CG033900 Rh7DG030400 Rh7DG032400
rosa_wichuraiana Rw7G002420 Rw7G002670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 834, 1752, 1899, 2112
AasI GACNNNNNNGTC 1 cut(s) 19
Acc36I ACCTGC 2 cut(s) 1270, 1528
AccB7I CCANNNNNTGG 1 cut(s) 1878
AccBSI CCGCTC 2 cut(s) 237, 289
AccI GTMKAC 1 cut(s) 969
AciI CCGC 6 cut(s) 108, 111, 235, 287, 381, 1970
AclWI GGATC 7 cut(s) 427, 455, 1120, 1166, 1179, 1499, 1512
AcoI YGGCCR 1 cut(s) 425
AcuI CTGAAG 1 cut(s) 214
AcyI GRCGYC 1 cut(s) 154
AfaI GTAC 1 cut(s) 277
AfiI CCNNNNNNNGG 4 cut(s) 442, 1623, 1708, 1878
AgsI TTSAA 9 cut(s) 699, 910, 959, 1014, 1082, 1414, 1855, 1935, 2009
AjnI CCWGG 2 cut(s) 88, 221
AloI GAACNNNNNNTCC 2 cut(s) 849, 881
Alw26I GTCTC 4 cut(s) 170, 308, 1096, 1835
AlwI GGATC 7 cut(s) 427, 455, 1120, 1166, 1179, 1499, 1512
AoxI GGCC 7 cut(s) 425, 444, 506, 807, 1136, 1682, 2030
ApeKI GCWGC 6 cut(s) 185, 1114, 1143, 1267, 1308, 1311
ArsI GACNNNNNNTTYG 2 cut(s) 1834, 1866
AspLEI GCGC 1 cut(s) 1161
AspS9I GGNCC 5 cut(s) 328, 1136, 1573, 1682, 1881
AsuC2I CCSGG 1 cut(s) 1838
AsuHPI GGTGA 6 cut(s) 88, 336, 580, 683, 940, 1679
AvaII GGWCC 3 cut(s) 328, 1573, 1881
BamHI GGATCC 2 cut(s) 1171, 1504
BbsI GAAGAC 3 cut(s) 295, 1255, 1359
BbvI GCAGC 6 cut(s) 197, 1126, 1130, 1279, 1295, 1323
BccI CCATC 6 cut(s) 28, 968, 972, 1126, 1160, 1201
BceAI ACGGC 1 cut(s) 515
BcgI CGANNNNNNTGC 2 cut(s) 809, 843
BciT130I CCWGG 2 cut(s) 90, 223
BclI TGATCA 2 cut(s) 46, 637
BcnI CCSGG 1 cut(s) 1838
BcoDI GTCTC 4 cut(s) 170, 308, 1096, 1835
BfaI CTAG 6 cut(s) 150, 504, 521, 633, 849, 1962
BfmI CTRYAG 2 cut(s) 180, 1309
BfuAI ACCTGC 2 cut(s) 1270, 1528
BglII AGATCT 1 cut(s) 1299
BisI GCNGC 8 cut(s) 109, 186, 235, 1115, 1144, 1268, 1309, 1312
BlsI GCNGC 8 cut(s) 110, 187, 236, 1116, 1145, 1269, 1310, 1313
Bme1390I CCNGG 3 cut(s) 90, 223, 1838
Bme18I GGWCC 3 cut(s) 328, 1573, 1881
BmgT120I GGNCC 5 cut(s) 328, 1136, 1573, 1682, 1881
BmiI GGNNCC 4 cut(s) 330, 1173, 1506, 1574
BmrFI CCNGG 3 cut(s) 90, 223, 1838
BmsI GCATC 1 cut(s) 1155
BpiI GAAGAC 3 cut(s) 295, 1255, 1359
BplI GAGNNNNNCTC 2 cut(s) 1016, 1048
BpmI CTGGAG 2 cut(s) 1047, 2012
BpuEI CTTGAG 2 cut(s) 194, 333
BpuMI CCSGG 1 cut(s) 1838
BsaBI GATNNNNATC 1 cut(s) 738
BsaHI GRCGYC 1 cut(s) 154
BsaJI CCNNGG 1 cut(s) 509
BsaWI WCCGGW 1 cut(s) 196
BsaXI ACNNNNNCTCC 4 cut(s) 84, 114, 305, 335
Bsc4I CCNNNNNNNGG 4 cut(s) 442, 1623, 1708, 1878
Bse1I ACTGG 1 cut(s) 1733
Bse3DI GCAATG 2 cut(s) 418, 1321
Bse8I GATNNNNATC 1 cut(s) 738
BseBI CCWGG 2 cut(s) 90, 223
BseDI CCNNGG 1 cut(s) 509
BseGI GGATG 2 cut(s) 983, 1118
BseJI GATNNNNATC 1 cut(s) 738
BseLI CCNNNNNNNGG 4 cut(s) 442, 1623, 1708, 1878
BseMI GCAATG 2 cut(s) 418, 1321
BseNI ACTGG 1 cut(s) 1733
BseRI GAGGAG 3 cut(s) 154, 157, 2053
BseXI GCAGC 6 cut(s) 197, 1126, 1130, 1279, 1295, 1323
BseYI CCCAGC 1 cut(s) 1741
BsgI GTGCAG 1 cut(s) 1556
BshFI GGCC 7 cut(s) 427, 446, 508, 809, 1138, 1684, 2032
BsiSI CCGG 4 cut(s) 197, 428, 443, 1837
BslFI GGGAC 3 cut(s) 25, 314, 1506
BslI CCNNNNNNNGG 4 cut(s) 442, 1623, 1708, 1878
BsmAI GTCTC 4 cut(s) 170, 308, 1096, 1835
BsmFI GGGAC 3 cut(s) 25, 314, 1506
BsmI GAATGC 2 cut(s) 202, 1116
BsnI GGCC 7 cut(s) 427, 446, 508, 809, 1138, 1684, 2032
BspACI CCGC 6 cut(s) 108, 111, 235, 287, 381, 1970
BspANI GGCC 7 cut(s) 427, 446, 508, 809, 1138, 1684, 2032
BspLI GGNNCC 4 cut(s) 330, 1173, 1506, 1574
BspMAI CTGCAG 1 cut(s) 1313
BspMI ACCTGC 2 cut(s) 1270, 1528
BspPI GGATC 7 cut(s) 427, 455, 1120, 1166, 1179, 1499, 1512
BsrBI CCGCTC 2 cut(s) 237, 289
BsrDI GCAATG 2 cut(s) 418, 1321
BsrI ACTGG 1 cut(s) 1733
BssECI CCNNGG 1 cut(s) 509
BssNI GRCGYC 1 cut(s) 154
BssT1I CCWWGG 1 cut(s) 509
Bst2UI CCWGG 2 cut(s) 90, 223
Bst4CI ACNGT 8 cut(s) 131, 181, 373, 618, 1497, 1757, 2059, 2120
Bst6I CTCTTC 2 cut(s) 346, 1086
BstACI GRCGYC 1 cut(s) 154
BstC8I GCNNGC 4 cut(s) 392, 425, 794, 1587
BstDEI CTNAG 1 cut(s) 1197
BstEII GGTNACC 1 cut(s) 192
BstF5I GGATG 2 cut(s) 983, 1118
BstHHI GCGC 1 cut(s) 1161
BstMAI GTCTC 4 cut(s) 170, 308, 1096, 1835
BstMWI GCNNNNNNNGC 2 cut(s) 1276, 1967
BstNI CCWGG 2 cut(s) 90, 223
BstNSI RCATGY 1 cut(s) 1793
BstPI GGTNACC 1 cut(s) 192
BstSCI CCNGG 3 cut(s) 88, 221, 1836
BstSFI CTRYAG 2 cut(s) 180, 1309
BstV1I GCAGC 6 cut(s) 197, 1126, 1130, 1279, 1295, 1323
BstV2I GAAGAC 3 cut(s) 295, 1255, 1359
BstX2I RGATCY 5 cut(s) 432, 1125, 1171, 1299, 1504
BstXI CCANNNNNNTGG 1 cut(s) 423
BstYI RGATCY 5 cut(s) 432, 1125, 1171, 1299, 1504
BsuRI GGCC 7 cut(s) 427, 446, 508, 809, 1138, 1684, 2032
BtgZI GCGATG 1 cut(s) 765
BtsCI GGATG 2 cut(s) 983, 1118
BtsIMutI CAGTG 4 cut(s) 655, 1726, 1762, 1824
BveI ACCTGC 2 cut(s) 1270, 1528
Cac8I GCNNGC 4 cut(s) 392, 425, 794, 1587
CfoI GCGC 1 cut(s) 1161
Cfr13I GGNCC 5 cut(s) 328, 1136, 1573, 1682, 1881
CseI GACGC 2 cut(s) 143, 1432
Csp6I GTAC 1 cut(s) 276
CviAII CATG 5 cut(s) 574, 605, 1106, 1563, 1790
CviQI GTAC 1 cut(s) 276
DdeI CTNAG 1 cut(s) 1197
DrdI GACNNNNNNGTC 1 cut(s) 19
DseDI GACNNNNNNGTC 1 cut(s) 19
EaeI YGGCCR 1 cut(s) 425
Eam1104I CTCTTC 2 cut(s) 346, 1086
EarI CTCTTC 2 cut(s) 346, 1086
EciI GGCGGA 1 cut(s) 370
Eco130I CCWWGG 1 cut(s) 509
Eco147I AGGCCT 2 cut(s) 809, 2032
Eco32I GATATC 1 cut(s) 2026
Eco47I GGWCC 3 cut(s) 328, 1573, 1881
Eco57I CTGAAG 1 cut(s) 214
Eco91I GGTNACC 1 cut(s) 192
EcoO65I GGTNACC 1 cut(s) 192
EcoRII CCWGG 2 cut(s) 88, 221
EcoRV GATATC 1 cut(s) 2026
EcoT14I CCWWGG 1 cut(s) 509
EcoT22I ATGCAT 1 cut(s) 298
ErhI CCWWGG 1 cut(s) 509
FaeI CATG 5 cut(s) 577, 608, 1109, 1566, 1793
FaqI GGGAC 3 cut(s) 25, 314, 1506
FatI CATG 5 cut(s) 573, 604, 1105, 1562, 1789
FauNDI CATATG 1 cut(s) 298
FbaI TGATCA 2 cut(s) 46, 637
FblI GTMKAC 1 cut(s) 969
Fnu4HI GCNGC 8 cut(s) 109, 186, 235, 1115, 1144, 1268, 1309, 1312
FokI GGATG 2 cut(s) 990, 1105
Fsp4HI GCNGC 8 cut(s) 109, 186, 235, 1115, 1144, 1268, 1309, 1312
FspBI CTAG 6 cut(s) 150, 504, 521, 633, 849, 1962
GlaI GCGC 1 cut(s) 1160
GluI GCNGC 8 cut(s) 109, 186, 235, 1115, 1144, 1268, 1309, 1312
GsaI CCCAGC 1 cut(s) 1745
GsuI CTGGAG 2 cut(s) 1047, 2012
HaeIII GGCC 7 cut(s) 427, 446, 508, 809, 1138, 1684, 2032
HapII CCGG 4 cut(s) 197, 428, 443, 1837
HgaI GACGC 2 cut(s) 143, 1432
HhaI GCGC 1 cut(s) 1161
Hin1I GRCGYC 1 cut(s) 154
Hin1II CATG 5 cut(s) 577, 608, 1109, 1566, 1793
Hin6I GCGC 1 cut(s) 1159
HinP1I GCGC 1 cut(s) 1159
HincII GTYRAC 1 cut(s) 970
HindII GTYRAC 1 cut(s) 970
HindIII AAGCTT 3 cut(s) 392, 1199, 1886
HpaII CCGG 4 cut(s) 197, 428, 443, 1837
HphI GGTGA 6 cut(s) 88, 336, 580, 683, 940, 1679
Hpy166II GTNNAC 6 cut(s) 840, 868, 932, 970, 1030, 1422
Hpy188I TCNGA 5 cut(s) 46, 273, 1374, 1509, 1531
Hpy188III TCNNGA 6 cut(s) 743, 1000, 1064, 1129, 1231, 1991
Hpy8I GTNNAC 6 cut(s) 840, 868, 932, 970, 1030, 1422
Hpy99I CGWCG 3 cut(s) 135, 159, 974
HpyAV CCTTC 5 cut(s) 580, 740, 782, 1420, 1849
HpyCH4III ACNGT 8 cut(s) 131, 181, 373, 618, 1497, 1757, 2059, 2120
HpyCH4IV ACGT 1 cut(s) 953
HpyF10VI GCNNNNNNNGC 2 cut(s) 1276, 1967
HpyF3I CTNAG 1 cut(s) 1197
HpySE526I ACGT 1 cut(s) 953
Hsp92I GRCGYC 1 cut(s) 154
Hsp92II CATG 5 cut(s) 577, 608, 1109, 1566, 1793
HspAI GCGC 1 cut(s) 1159
Ksp22I TGATCA 2 cut(s) 46, 637
LmnI GCTCC 3 cut(s) 199, 242, 492
Lsp1109I GCAGC 6 cut(s) 197, 1126, 1130, 1279, 1295, 1323
LweI GCATC 1 cut(s) 1155
MaeI CTAG 6 cut(s) 150, 504, 521, 633, 849, 1962
MaeII ACGT 1 cut(s) 953
MaeIII GTNAC 8 cut(s) 192, 586, 671, 1519, 1867, 2049, 2059, 2120
MbiI CCGCTC 2 cut(s) 237, 289
MflI RGATCY 5 cut(s) 432, 1125, 1171, 1299, 1504
MluCI AATT 4 cut(s) 472, 1553, 1973, 2004
MlyI GAGTC 3 cut(s) 491, 560, 1025
MmeI TCCRAC 3 cut(s) 109, 637, 1397
Mph1103I ATGCAT 1 cut(s) 298
MseI TTAA 8 cut(s) 336, 690, 1259, 1389, 1476, 1500, 1596, 2079
MspI CCGG 4 cut(s) 197, 428, 443, 1837
MspR9I CCNGG 3 cut(s) 90, 223, 1838
Mva1269I GAATGC 2 cut(s) 202, 1116
MvaI CCWGG 2 cut(s) 90, 223
MwoI GCNNNNNNNGC 2 cut(s) 1276, 1967
NciI CCSGG 1 cut(s) 1838
NdeI CATATG 1 cut(s) 298
NlaIII CATG 5 cut(s) 577, 608, 1109, 1566, 1793
NlaIV GGNNCC 4 cut(s) 330, 1173, 1506, 1574
NmuCI GTSAC 3 cut(s) 586, 671, 2120
NsiI ATGCAT 1 cut(s) 298
NspI RCATGY 1 cut(s) 1793
PceI AGGCCT 2 cut(s) 809, 2032
PcsI WCGNNNNNNNCGW 2 cut(s) 1370, 2092
PctI GAATGC 2 cut(s) 202, 1116
PfeI GAWTC 7 cut(s) 1186, 1337, 1369, 1396, 1457, 1829, 1951
PflFI GACNNNGTC 1 cut(s) 319
PflMI CCANNNNNTGG 1 cut(s) 1878
PfoI TCCNGGA 1 cut(s) 1836
PkrI GCNGC 8 cut(s) 110, 187, 236, 1116, 1145, 1269, 1310, 1313
PleI GAGTC 3 cut(s) 490, 560, 1025
PpsI GAGTC 3 cut(s) 490, 560, 1025
PsiI TTATAA 4 cut(s) 834, 1752, 1899, 2112
Psp6I CCWGG 2 cut(s) 88, 221
PspEI GGTNACC 1 cut(s) 192
PspFI CCCAGC 1 cut(s) 1741
PspGI CCWGG 2 cut(s) 88, 221
PspN4I GGNNCC 4 cut(s) 330, 1173, 1506, 1574
PspPI GGNCC 5 cut(s) 328, 1136, 1573, 1682, 1881
PstI CTGCAG 1 cut(s) 1313
PsuI RGATCY 5 cut(s) 432, 1125, 1171, 1299, 1504
PsyI GACNNNGTC 1 cut(s) 319
RsaI GTAC 1 cut(s) 277
RsaNI GTAC 1 cut(s) 276
SalI GTCGAC 1 cut(s) 968
SaqAI TTAA 8 cut(s) 336, 690, 1259, 1389, 1476, 1500, 1596, 2079
SatI GCNGC 8 cut(s) 109, 186, 235, 1115, 1144, 1268, 1309, 1312
Sau96I GGNCC 5 cut(s) 328, 1136, 1573, 1682, 1881
SchI GAGTC 3 cut(s) 491, 560, 1025
ScrFI CCNGG 3 cut(s) 90, 223, 1838
SfaNI GCATC 1 cut(s) 1155
SfcI CTRYAG 2 cut(s) 180, 1309
SinI GGWCC 3 cut(s) 328, 1573, 1881
SmlI CTYRAG 2 cut(s) 173, 348
SmoI CTYRAG 2 cut(s) 173, 348
Sse9I AATT 4 cut(s) 472, 1553, 1973, 2004
SseBI AGGCCT 2 cut(s) 809, 2032
SsiI CCGC 6 cut(s) 108, 111, 235, 287, 381, 1970
SspMI CTAG 6 cut(s) 150, 504, 521, 633, 849, 1962
StuI AGGCCT 2 cut(s) 809, 2032
StyD4I CCNGG 3 cut(s) 88, 221, 1836
StyI CCWWGG 1 cut(s) 509
TaaI ACNGT 8 cut(s) 131, 181, 373, 618, 1497, 1757, 2059, 2120
TaiI ACGT 1 cut(s) 956
TaqI TCGA 4 cut(s) 306, 969, 1230, 1821
TasI AATT 4 cut(s) 472, 1553, 1973, 2004
TauI GCSGC 2 cut(s) 111, 237
TfiI GAWTC 7 cut(s) 1186, 1337, 1369, 1396, 1457, 1829, 1951
Tru1I TTAA 8 cut(s) 336, 690, 1259, 1389, 1476, 1500, 1596, 2079
Tru9I TTAA 8 cut(s) 336, 690, 1259, 1389, 1476, 1500, 1596, 2079
TscAI CASTG 4 cut(s) 655, 1733, 1762, 1831
TseFI GTSAC 3 cut(s) 586, 671, 2120
TseI GCWGC 6 cut(s) 185, 1114, 1143, 1267, 1308, 1311
Tsp45I GTSAC 3 cut(s) 586, 671, 2120
TspDTI ATGAA 3 cut(s) 562, 621, 1365
TspGWI ACGGA 2 cut(s) 326, 489
TspRI CASTG 4 cut(s) 655, 1733, 1762, 1831
Tth111I GACNNNGTC 1 cut(s) 319
Van91I CCANNNNNTGG 1 cut(s) 1878
VpaK11BI GGWCC 3 cut(s) 328, 1573, 1881
XceI RCATGY 1 cut(s) 1793
XmiI GTMKAC 1 cut(s) 969
XspI CTAG 6 cut(s) 150, 504, 521, 633, 849, 1962
Zsp2I ATGCAT 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.