Rh7DG032400

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000424
Physical Location & Seq
Forward (+)
2400613 .. 2402892
2280 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG032400.1

Sequence Viewer

Length: 2280 bp
ATGGAAGAAGGGAAAGCCAAGTCTTTATTTGTGATGGCGCATTCTGGTCACAGCTCATATAGCTCGCTGTATGAGGTGAAAATCCAACCAGGAGGACAAGTCATAGGCGGCGGTGGAGAATGTAGCAACCGTCGTAAGAGGAGGAGTTCTAGGCGTCGTAGGGTTCTGCTACTTGAGCCTGTGGCAGCAAGGTTACCAGAGCATTCACACTTGGGAACTGCCAGGTTTTTCAGCCGCTCCAAACTATACTTGTTCCCAAACAAAACTACTCGGAGTACCTCAAAACCGCCCTATGCATATGTCTTCGACACGGAGACAAAGTCATTGGTCCCATTTAACTCTTCACCTCAAGCTCATAAGCCTTATGCAACTGTTGTTTCCGCCTATGGCAAGCTTTATCATCTTGCTACCAACCCACATTGCTGGCCGGAGATCCCAACTCCGGCCTTTGAGCGATATGATCCTGCCACTAATTGTTGGGAGTCGCTCCCTCCTTGTCCGGCCAGGCCAAGGAAGATACTAGGCTATGCAGTTTGTTATGGCTTTATTCTGTTCTCACTTGGCGACGACTCCTTCATGGCTTTTGATGTCACCAGAAAACAATGGCATGAAGTCCAACTGTGGCTGCCTGCTTCTGGTGATCATCGGTTCAGTGGGAGGGCTGTGGTTGTAGGTGACACTATCTATACCTTTAAGATTTCAAGTAATAGTGTTGTTGCATACAACTTTTGGTGGGATTTAGATCAGGAAGGTGATGTTACATTTTATATAAGCCCTCAACCCGATTTGGAAGGCTTGCATATCAACAAGGCCTTTCTGGTGCAAACAGGTCGTTATAAGTTTACAGAAACTAGACAAGGATATTTGGTTCACTTGGGAAACTTGGATTTTTGTCTTGTCCAAAATCGGTTCAAAAAACATAGAGCTGATCGTGAACAGAAACTCTGTATCACCACGTTTCAAGTTGTGGTCGACGATGAACGGGGAGGGAAGCATATCATCAAGACCTTACATTCAACTTTATGTGAGGTGGACTCCCTCATTCATTTGGGTTTCAGCTTTACTCCAGATTGTGATGATTTTGAACCCACAGAAGAGGAAATGAGACAAGCTGCAACATTGAGTCACCTTGCTGATTTCGATGCAAATGAATTCGGCATGTCACACACTATCCCACAAGAGCTAATCTTTGACATACTTGCAAGGCTTTCGACCAAGGATTTGATACGACTCATGTGTGTTTCCAAAGCATGGAATGCAGCCATCCAAGACCCAGAATGGGCCAAGCTGCATCGCCAGCTCTCCATCAAGCGCAACTCTTTGGATCCGACCTTTTTAATTCTACCATCTCAGCTTGATGAGTTTTTTACAATGACCTTGTTCGACAATGGCACAAAGGGAAGACTTGTGTTAATCAAGCAGCAGTCAAAGCAGGTTGAGAAAAGAAATAAGATCTTGGGCTGCAGCAATGGTTTGCTTTGCATTTACGAATCTATGGAAAATGAAGACTTTGGTTTGTGGAATCCGACAATCCACAAGTTTAAGAGGATTCCTTTGTCAGCCTTCAATAAGTGGACGCAGAGCAAGACCTTTTATGGCTTCGGGTATGATTCAGTCAATGATGACTATAAGTTTGTGAAAATGGGACAGTTTAAGGATCCGAGTGGTGTTGTTACAAGCTCGGAAGTGCAGGTTTATAGTCTAAAATTGCACTCATGGAAAAGGGTCCAAGATTTGCCTTCTCATCTTAATAAAGATTATATACTTGCCTCAAATGGGGTTTGTCTGGCTAGTTCCTTACATTGGTTGATGAGATTAGGTGATAAAGGTGGAGGACCAATGATAGTTCTATCCCTTGATCTGGCAAGTGAAGAATACCACTGGTTTTCTGCCCCAGCTTGTTATAACAGTGAGCATTTGAGTATCAACTACTTGGATTTGCATGTAATGGCAGGGTTCTTATGCTTTTGTTTCGACACTGATTCCCTCCGGGAGACTTGGATTTTGAAGGAATATGGAGTTACCAAATCTTGGACCAAGCTTTGTTATTATAAAAGAAATTGGGGTTGCAATCCTTTGATCTTTTCAAAGTGTGGTAAGAAGATTCTTTTCGCAAGAGTTGCGGAATTGTTTTGGTATGATCTGGAGAACAAGAGAATTGAAAATGTCAGCACTGATATCAGGCCTGTGAGGAGTAGGCCGTTACAGACGGTAACTTCTGTGGAAAACCTTAATCTTCTTAGGAGGCGACCAGAACTACCTTATAATAACTGTCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

759

Amino Acids

87.14

Weight (kDa)

8.68

Isoelectric Point (pI)

50.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 12 - 336 1.5e-13 Protein of unknown function (DUF1668)
F-box-like PF12937 391 - 432 1.7e-09 F-box-like
F-box PF00646 391 - 426 6e-09 F-box domain
FBA_3 PF08268 453 - 684 2.6e-17 F-box associated beta propeller domain
FBA_1 PF07734 472 - 685 3.1e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000424)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32600 AT1G54640
fragaria_vesca FvH4_2g26290 FvH4_2g26290 FvH4_2g26300 FvH4_5g16160 FvH4_6g49561 FvH4_6g49581
malus_domestica MD02G1261500.v1.1 MD02G1290400.v1.1 MD02G1290700.v1.1 MD02G1290800.v1.1 MD05G1183700.v1.1 MD07G1058700.v1.1 MD07G1058900.v1.1 MD07G1059200.v1.1 MD08G1079300.v1.1 MD08G1079600.v1.1 MD16G1218300.v1.1 MD16G1218400.v1.1 MD16G1218600.v1.1 MD16G1218700.v1.1 MD17G1102900.v1.1
prunus_persica Prupe.1G024400_v2.0.a1 Prupe.1G024500_v2.0.a1 Prupe.1G024600_v2.0.a1 Prupe.1G024800_v2.0.a1 Prupe.1G025300_v2.0.a1 Prupe.1G025400_v2.0.a1 Prupe.1G556300_v2.0.a1 Prupe.3G094100_v2.0.a1 Prupe.3G094200_v2.0.a1
pyrus_communis pycom02g22350 pycom05g27240 pycom07g04530 pycom07g04540 pycom08g06570 pycom10g07370 pycom16g17130 pycom16g17140 pycom16g17150 pycom16g17160 pycom16g17180 pycom17g09720
rosa_chinensis RchiOBHm_Chr6g0294901 RchiOBHm_Chr7g0179991 RchiOBHm_Chr7g0180101 RchiOBHm_Chr7g0180241
rosa_laevigata RLG00000005281 RLG00000005282 RLG00000005293 RLG00000005304 RLG00000011829 RLG00000011831 RLG00000011832 RLG00000021887
rosa_multiflora Rmu_co8519977.1_g000001 Rmu_sc0008966.1_g000002 Rmu_sc0008966.1_g000003 Rmu_sc0008966.1_g000008 Rmu_sc0011963.1_g000010 Rmu_ssc0000119.1_g000012 Rmu_ssc0000119.1_g000032
rosa_roxburghii Rroxscaffold_2G00081970 Rroxscaffold_2G00081980 Rroxscaffold_3G00273030 Rroxscaffold_3G00273250 Rroxscaffold_7G00172880 Rroxscaffold_7G00172900
rosa_rugosa Rorug02G0541400 Rorug06G0429600
rosa_samantha Rh2AG613800 Rh2CG595200 Rh2CG595300 Rh6AG361300 Rh6BG368000 Rh6BG368100 Rh6BG368300 Rh6BG368500 Rh6BG368600 Rh6CG375200 Rh6CG375300 Rh7AG030100 Rh7AG031000 Rh7AG032000 Rh7BG029400 Rh7BG029500 Rh7BG032100 Rh7CG031100 Rh7CG032700 Rh7CG032800 Rh7CG033900 Rh7DG030400 Rh7DG032400
rosa_wichuraiana Rw7G002420 Rw7G002670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 837, 1905, 2052, 2265
Acc36I ACCTGC 2 cut(s) 1423, 1681
AccB7I CCANNNNNTGG 2 cut(s) 1251, 2031
AccBSI CCGCTC 1 cut(s) 237
AccI GTMKAC 1 cut(s) 972
AciI CCGC 6 cut(s) 108, 111, 235, 287, 381, 2123
AclWI GGATC 6 cut(s) 427, 455, 1319, 1332, 1652, 1665
AcoI YGGCCR 2 cut(s) 425, 501
AcsI RAATTY 1 cut(s) 1151
AcyI GRCGYC 1 cut(s) 154
AfaI GTAC 1 cut(s) 277
AfiI CCNNNNNNNGG 9 cut(s) 442, 510, 635, 1251, 1279, 1776, 1803, 1861, 2031
AgsI TTSAA 9 cut(s) 702, 913, 962, 1017, 1085, 1567, 2008, 2088, 2162
AjnI CCWGG 3 cut(s) 88, 221, 503
AloI GAACNNNNNNTCC 2 cut(s) 852, 884
Alw26I GTCTC 3 cut(s) 308, 1099, 1988
AlwI GGATC 6 cut(s) 427, 455, 1319, 1332, 1652, 1665
AoxI GGCC 8 cut(s) 425, 444, 501, 506, 810, 1281, 2183, 2198
ApeKI GCWGC 8 cut(s) 185, 625, 1112, 1259, 1288, 1420, 1461, 1464
ApoI RAATTY 1 cut(s) 1151
ArsI GACNNNNNNTTYG 6 cut(s) 1204, 1236, 1616, 1648, 1987, 2019
AspLEI GCGC 2 cut(s) 40, 1314
AspS9I GGNCC 5 cut(s) 328, 1281, 1726, 1835, 2034
AsuC2I CCSGG 1 cut(s) 1991
AsuHPI GGTGA 9 cut(s) 88, 336, 583, 650, 686, 764, 943, 1118, 1832
AvaII GGWCC 4 cut(s) 328, 1726, 1835, 2034
BamHI GGATCC 2 cut(s) 1324, 1657
BbsI GAAGAC 3 cut(s) 295, 1408, 1512
BbvI GCAGC 8 cut(s) 197, 612, 1099, 1271, 1275, 1432, 1448, 1476
BccI CCATC 4 cut(s) 28, 1271, 1313, 1354
BceAI ACGGC 1 cut(s) 2185
BcgI CGANNNNNNTGC 4 cut(s) 812, 846, 1191, 1225
BciT130I CCWGG 3 cut(s) 90, 223, 505
BclI TGATCA 1 cut(s) 640
BcnI CCSGG 1 cut(s) 1991
BcoDI GTCTC 3 cut(s) 308, 1099, 1988
BfaI CTAG 4 cut(s) 150, 521, 852, 1791
BfmI CTRYAG 1 cut(s) 1462
BfuAI ACCTGC 2 cut(s) 1423, 1681
BglII AGATCT 1 cut(s) 1452
Bme1390I CCNGG 4 cut(s) 90, 223, 505, 1991
Bme18I GGWCC 4 cut(s) 328, 1726, 1835, 2034
BmgT120I GGNCC 5 cut(s) 328, 1281, 1726, 1835, 2034
BmiI GGNNCC 4 cut(s) 330, 1326, 1659, 1727
BmrFI CCNGG 4 cut(s) 90, 223, 505, 1991
BmsI GCATC 2 cut(s) 1132, 1300
BpiI GAAGAC 3 cut(s) 295, 1408, 1512
BplI GAGNNNNNCTC 2 cut(s) 1019, 1051
BpmI CTGGAG 2 cut(s) 1050, 2165
BpuEI CTTGAG 2 cut(s) 194, 333
BpuMI CCSGG 1 cut(s) 1991
BsaBI GATNNNNATC 1 cut(s) 741
BsaHI GRCGYC 1 cut(s) 154
BsaJI CCNNGG 2 cut(s) 509, 1215
BsaXI ACNNNNNCTCC 4 cut(s) 84, 114, 305, 335
Bsc4I CCNNNNNNNGG 9 cut(s) 442, 510, 635, 1251, 1279, 1776, 1803, 1861, 2031
Bse1I ACTGG 1 cut(s) 1886
Bse3DI GCAATG 2 cut(s) 418, 1474
Bse8I GATNNNNATC 1 cut(s) 741
BseBI CCWGG 3 cut(s) 90, 223, 505
BseDI CCNNGG 2 cut(s) 509, 1215
BseGI GGATG 1 cut(s) 1263
BseJI GATNNNNATC 1 cut(s) 741
BseLI CCNNNNNNNGG 9 cut(s) 442, 510, 635, 1251, 1279, 1776, 1803, 1861, 2031
BseMI GCAATG 2 cut(s) 418, 1474
BseMII CTCAG 1 cut(s) 1364
BseNI ACTGG 1 cut(s) 1886
BseRI GAGGAG 3 cut(s) 154, 157, 2206
BseXI GCAGC 8 cut(s) 197, 612, 1099, 1271, 1275, 1432, 1448, 1476
BseYI CCCAGC 1 cut(s) 1894
BsgI GTGCAG 1 cut(s) 1709
BshFI GGCC 8 cut(s) 427, 446, 503, 508, 812, 1283, 2185, 2200
BsiSI CCGG 4 cut(s) 428, 443, 500, 1990
BslFI GGGAC 2 cut(s) 314, 1659
BslI CCNNNNNNNGG 9 cut(s) 442, 510, 635, 1251, 1279, 1776, 1803, 1861, 2031
BsmAI GTCTC 3 cut(s) 308, 1099, 1988
BsmFI GGGAC 2 cut(s) 314, 1659
BsmI GAATGC 3 cut(s) 40, 202, 1261
BsnI GGCC 8 cut(s) 427, 446, 503, 508, 812, 1283, 2185, 2200
BspACI CCGC 6 cut(s) 108, 111, 235, 287, 381, 2123
BspANI GGCC 8 cut(s) 427, 446, 503, 508, 812, 1283, 2185, 2200
BspCNI CTCAG 1 cut(s) 1363
BspLI GGNNCC 4 cut(s) 330, 1326, 1659, 1727
BspMAI CTGCAG 1 cut(s) 1466
BspMI ACCTGC 2 cut(s) 1423, 1681
BspPI GGATC 6 cut(s) 427, 455, 1319, 1332, 1652, 1665
BsrBI CCGCTC 1 cut(s) 237
BsrDI GCAATG 2 cut(s) 418, 1474
BsrI ACTGG 1 cut(s) 1886
BssECI CCNNGG 2 cut(s) 509, 1215
BssNI GRCGYC 1 cut(s) 154
BssT1I CCWWGG 2 cut(s) 509, 1215
Bst2UI CCWGG 3 cut(s) 90, 223, 505
Bst4CI ACNGT 7 cut(s) 131, 373, 621, 1650, 1910, 2212, 2273
Bst6I CTCTTC 2 cut(s) 346, 1089
BstACI GRCGYC 1 cut(s) 154
BstAPI GCANNNNNTGC 2 cut(s) 1256, 2120
BstC8I GCNNGC 6 cut(s) 65, 392, 425, 630, 797, 1298
BstDEI CTNAG 2 cut(s) 1350, 2240
BstEII GGTNACC 1 cut(s) 192
BstF5I GGATG 1 cut(s) 1263
BstHHI GCGC 2 cut(s) 40, 1314
BstMAI GTCTC 3 cut(s) 308, 1099, 1988
BstMWI GCNNNNNNNGC 6 cut(s) 60, 175, 1256, 1297, 1429, 2120
BstNI CCWGG 3 cut(s) 90, 223, 505
BstNSI RCATGY 2 cut(s) 1162, 1946
BstPI GGTNACC 1 cut(s) 192
BstSCI CCNGG 4 cut(s) 88, 221, 503, 1989
BstSFI CTRYAG 1 cut(s) 1462
BstV1I GCAGC 8 cut(s) 197, 612, 1099, 1271, 1275, 1432, 1448, 1476
BstV2I GAAGAC 3 cut(s) 295, 1408, 1512
BstX2I RGATCY 4 cut(s) 432, 1324, 1452, 1657
BstXI CCANNNNNNTGG 1 cut(s) 423
BstYI RGATCY 4 cut(s) 432, 1324, 1452, 1657
BsuRI GGCC 8 cut(s) 427, 446, 503, 508, 812, 1283, 2185, 2200
BtgZI GCGATG 1 cut(s) 1277
BtsCI GGATG 1 cut(s) 1263
BtsIMutI CAGTG 5 cut(s) 658, 1879, 1915, 1977, 2172
BveI ACCTGC 2 cut(s) 1423, 1681
Cac8I GCNNGC 6 cut(s) 65, 392, 425, 630, 797, 1298
CfoI GCGC 2 cut(s) 40, 1314
Cfr13I GGNCC 5 cut(s) 328, 1281, 1726, 1835, 2034
CseI GACGC 2 cut(s) 143, 1585
Csp6I GTAC 1 cut(s) 276
CviAII CATG 7 cut(s) 577, 608, 1159, 1234, 1251, 1716, 1943
CviQI GTAC 1 cut(s) 276
DdeI CTNAG 2 cut(s) 1350, 2240
EaeI YGGCCR 2 cut(s) 425, 501
Eam1104I CTCTTC 2 cut(s) 346, 1089
EarI CTCTTC 2 cut(s) 346, 1089
EciI GGCGGA 1 cut(s) 370
Eco130I CCWWGG 2 cut(s) 509, 1215
Eco147I AGGCCT 2 cut(s) 812, 2185
Eco32I GATATC 1 cut(s) 2179
Eco47I GGWCC 4 cut(s) 328, 1726, 1835, 2034
Eco91I GGTNACC 1 cut(s) 192
EcoO65I GGTNACC 1 cut(s) 192
EcoRI GAATTC 1 cut(s) 1151
EcoRII CCWGG 3 cut(s) 88, 221, 503
EcoRV GATATC 1 cut(s) 2179
EcoT14I CCWWGG 2 cut(s) 509, 1215
EcoT22I ATGCAT 1 cut(s) 298
ErhI CCWWGG 2 cut(s) 509, 1215
FaeI CATG 7 cut(s) 580, 611, 1162, 1237, 1254, 1719, 1946
FaqI GGGAC 2 cut(s) 314, 1659
FatI CATG 7 cut(s) 576, 607, 1158, 1233, 1250, 1715, 1942
FauNDI CATATG 1 cut(s) 298
FbaI TGATCA 1 cut(s) 640
FblI GTMKAC 1 cut(s) 972
FokI GGATG 1 cut(s) 1250
FspBI CTAG 4 cut(s) 150, 521, 852, 1791
GlaI GCGC 2 cut(s) 39, 1313
GsaI CCCAGC 1 cut(s) 1898
GsuI CTGGAG 2 cut(s) 1050, 2165
HaeIII GGCC 8 cut(s) 427, 446, 503, 508, 812, 1283, 2185, 2200
HapII CCGG 4 cut(s) 428, 443, 500, 1990
HgaI GACGC 2 cut(s) 143, 1585
HhaI GCGC 2 cut(s) 40, 1314
Hin1I GRCGYC 1 cut(s) 154
Hin1II CATG 7 cut(s) 580, 611, 1162, 1237, 1254, 1719, 1946
Hin6I GCGC 2 cut(s) 38, 1312
HinP1I GCGC 2 cut(s) 38, 1312
HincII GTYRAC 1 cut(s) 973
HindII GTYRAC 1 cut(s) 973
HindIII AAGCTT 2 cut(s) 392, 2039
HpaII CCGG 4 cut(s) 428, 443, 500, 1990
HphI GGTGA 9 cut(s) 88, 336, 583, 650, 686, 764, 943, 1118, 1832
Hpy166II GTNNAC 6 cut(s) 843, 871, 935, 973, 1033, 1575
Hpy188I TCNGA 5 cut(s) 273, 1329, 1527, 1662, 1684
Hpy188III TCNNGA 5 cut(s) 746, 932, 1003, 1067, 2144
Hpy8I GTNNAC 6 cut(s) 843, 871, 935, 973, 1033, 1575
Hpy99I CGWCG 4 cut(s) 135, 159, 569, 977
HpyAV CCTTC 6 cut(s) 583, 743, 785, 1573, 1749, 2002
HpyCH4III ACNGT 7 cut(s) 131, 373, 621, 1650, 1910, 2212, 2273
HpyCH4IV ACGT 1 cut(s) 956
HpyF10VI GCNNNNNNNGC 6 cut(s) 60, 175, 1256, 1297, 1429, 2120
HpyF3I CTNAG 2 cut(s) 1350, 2240
HpySE526I ACGT 1 cut(s) 956
Hsp92I GRCGYC 1 cut(s) 154
Hsp92II CATG 7 cut(s) 580, 611, 1162, 1237, 1254, 1719, 1946
HspAI GCGC 2 cut(s) 38, 1312
Ksp22I TGATCA 1 cut(s) 640
LmnI GCTCC 2 cut(s) 242, 492
Lsp1109I GCAGC 8 cut(s) 197, 612, 1099, 1271, 1275, 1432, 1448, 1476
LweI GCATC 2 cut(s) 1132, 1300
MaeI CTAG 4 cut(s) 150, 521, 852, 1791
MaeII ACGT 1 cut(s) 956
MbiI CCGCTC 1 cut(s) 237
MflI RGATCY 4 cut(s) 432, 1324, 1452, 1657
MluCI AATT 7 cut(s) 472, 1151, 1338, 1706, 2059, 2126, 2157
MlyI GAGTC 5 cut(s) 491, 563, 1028, 1132, 1224
MmeI TCCRAC 4 cut(s) 109, 640, 1352, 1550
Mph1103I ATGCAT 1 cut(s) 298
MseI TTAA 8 cut(s) 336, 693, 1337, 1412, 1542, 1653, 1749, 2232
MspI CCGG 4 cut(s) 428, 443, 500, 1990
MspR9I CCNGG 4 cut(s) 90, 223, 505, 1991
Mva1269I GAATGC 3 cut(s) 40, 202, 1261
MvaI CCWGG 3 cut(s) 90, 223, 505
MwoI GCNNNNNNNGC 6 cut(s) 60, 175, 1256, 1297, 1429, 2120
NciI CCSGG 1 cut(s) 1991
NdeI CATATG 1 cut(s) 298
NlaIII CATG 7 cut(s) 580, 611, 1162, 1237, 1254, 1719, 1946
NlaIV GGNNCC 4 cut(s) 330, 1326, 1659, 1727
NmuCI GTSAC 6 cut(s) 47, 589, 674, 1124, 1161, 2273
NsiI ATGCAT 1 cut(s) 298
NspI RCATGY 2 cut(s) 1162, 1946
PceI AGGCCT 2 cut(s) 812, 2185
PctI GAATGC 3 cut(s) 40, 202, 1261
PfeI GAWTC 6 cut(s) 1490, 1522, 1549, 1610, 1982, 2104
PflFI GACNNNGTC 1 cut(s) 319
PflMI CCANNNNNTGG 2 cut(s) 1251, 2031
PfoI TCCNGGA 1 cut(s) 1989
PleI GAGTC 5 cut(s) 490, 563, 1028, 1131, 1224
PpsI GAGTC 5 cut(s) 490, 563, 1028, 1131, 1224
PsiI TTATAA 4 cut(s) 837, 1905, 2052, 2265
Psp6I CCWGG 3 cut(s) 88, 221, 503
PspEI GGTNACC 1 cut(s) 192
PspFI CCCAGC 1 cut(s) 1894
PspGI CCWGG 3 cut(s) 88, 221, 503
PspN4I GGNNCC 4 cut(s) 330, 1326, 1659, 1727
PspPI GGNCC 5 cut(s) 328, 1281, 1726, 1835, 2034
PstI CTGCAG 1 cut(s) 1466
PsuI RGATCY 4 cut(s) 432, 1324, 1452, 1657
PsyI GACNNNGTC 1 cut(s) 319
RsaI GTAC 1 cut(s) 277
RsaNI GTAC 1 cut(s) 276
SalI GTCGAC 1 cut(s) 971
SaqAI TTAA 8 cut(s) 336, 693, 1337, 1412, 1542, 1653, 1749, 2232
Sau96I GGNCC 5 cut(s) 328, 1281, 1726, 1835, 2034
SchI GAGTC 5 cut(s) 491, 563, 1028, 1132, 1224
ScrFI CCNGG 4 cut(s) 90, 223, 505, 1991
SfaNI GCATC 2 cut(s) 1132, 1300
SfcI CTRYAG 1 cut(s) 1462
SinI GGWCC 4 cut(s) 328, 1726, 1835, 2034
SmlI CTYRAG 2 cut(s) 173, 348
SmoI CTYRAG 2 cut(s) 173, 348
Sse9I AATT 7 cut(s) 472, 1151, 1338, 1706, 2059, 2126, 2157
SseBI AGGCCT 2 cut(s) 812, 2185
SsiI CCGC 6 cut(s) 108, 111, 235, 287, 381, 2123
SspMI CTAG 4 cut(s) 150, 521, 852, 1791
StuI AGGCCT 2 cut(s) 812, 2185
StyD4I CCNGG 4 cut(s) 88, 221, 503, 1989
StyI CCWWGG 2 cut(s) 509, 1215
TaaI ACNGT 7 cut(s) 131, 373, 621, 1650, 1910, 2212, 2273
TaiI ACGT 1 cut(s) 959
TaqI TCGA 6 cut(s) 306, 972, 1140, 1211, 1383, 1974
TasI AATT 7 cut(s) 472, 1151, 1338, 1706, 2059, 2126, 2157
TauI GCSGC 2 cut(s) 111, 237
TfiI GAWTC 6 cut(s) 1490, 1522, 1549, 1610, 1982, 2104
Tru1I TTAA 8 cut(s) 336, 693, 1337, 1412, 1542, 1653, 1749, 2232
Tru9I TTAA 8 cut(s) 336, 693, 1337, 1412, 1542, 1653, 1749, 2232
TscAI CASTG 5 cut(s) 658, 1886, 1915, 1984, 2179
TseFI GTSAC 6 cut(s) 47, 589, 674, 1124, 1161, 2273
TseI GCWGC 8 cut(s) 185, 625, 1112, 1259, 1288, 1420, 1461, 1464
Tsp45I GTSAC 6 cut(s) 47, 589, 674, 1124, 1161, 2273
TspDTI ATGAA 6 cut(s) 565, 624, 993, 1034, 1164, 1518
TspGWI ACGGA 1 cut(s) 326
TspRI CASTG 5 cut(s) 658, 1886, 1915, 1984, 2179
Tth111I GACNNNGTC 1 cut(s) 319
Van91I CCANNNNNTGG 2 cut(s) 1251, 2031
VpaK11BI GGWCC 4 cut(s) 328, 1726, 1835, 2034
XapI RAATTY 1 cut(s) 1151
XceI RCATGY 2 cut(s) 1162, 1946
XmiI GTMKAC 1 cut(s) 972
XspI CTAG 4 cut(s) 150, 521, 852, 1791
Zsp2I ATGCAT 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.