FvH4_5g31800

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000191
Physical Location & Seq
Reverse (-)
22939048 .. 22943385
4338 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g31800.t1

Sequence Viewer

Length: 1674 bp
ATGGCTTATTCTCACCATGAATCACCGGAGACCTTAACCCCACTCTTAGAAGACGACGTCGTCGACGGCGCCGCTGACTACAAAGGCCTTCCGGCCCGCCGATCCACCTCCGGCGGTTGGCGCTCCGCTTCCTTCATAATAGGTGTGGAAGTTGCGGAGAGGTTCGCCTACTACGGAATCAGCTCCAATCTGATAACGTTTCTGACGGGGCCGTTGGGGCAGTCGACGGCCACGGCGGCGGAGAATGTGAACATATGGTCTGGAACGGCGTCGTTGCTTCCTCTATTGGGATCGGTCGTCGCCGATTCCTTCCTCGGTCGCTACCGCACCATTATTGCCGCTTCTCTCCTCTACATTTTGGGACTTGGCTTGTTGACCCTGTCGGCCATGATTCCTTCTTCTCAGCTTCAAGTACTGTTATTCTTCTTCTCTCTATATCTAGTAGCATTTGGGCAAGGTGGGCACAAGCCTTGTGTTCAGGCTTTTGGGGCAGATCAGTTTGATGGACAAGATCCAGAGGAGTGCAAGGCGAAAAGCTCATTCTTCAATTGGTGGTACTTTGGTGTCTGTGCAGGCGGGCTATTCACAGTCTCGGTATTGGCCTACATACAGGACAATCTAAGCTGGGGTCTGGGTTTTGGAATTCCTTGTGTTGTGATGATCCTTGCACTGATTATTTTTGTTGGTGGAACTAGAACATACCGGTATAGCATCAAAGGGGAGGAGGAAAGTCCATTTGTGAGAATCAGCAAAGTTTTTGTTGCTGCATTAGGGAACTGGCGCACTAGTCCTTCAGCAATAGCTTCTGAAGAGGAATCCCGTGGAACCTTGCCTCATCAAAGTTCTGAACAATACAAGTTCCTCAACAAAGCCTTGCTCGCGCCAGATGATTTGATGAAAAATGGGAAAATGTGTACCATCGCTGAGGTTGAGGAAGCAAAGGCTGTTCTTAGGCTGTTCCCAATATGGGCAACATGCTTGGTATACGGTACTGTATTTGCACAGTCCACTACTTTCTTCACCAAGCAAGGTGCTACAATGGACAGAACTATTGTCCCCGGTTTTGACATACCAGCAGCTTCACTGCAGTCGTTTATTGGCCTAACCATTATTATTTTCATACCCATTTACGACCGCATTTTCGTTCCAACAGCAAGAGCTTTCACCAGAGAACCCTCTGGCATTACAATGCTTCAAAGAATAGGAACTGGGATTTTTTTCTCTATCATCTCTATGGTCGTTGCAGCTTTAGTTGAGATAAAAAGGCTCCAAACTGCCGAAGATTATGATCTGGTTGATCTGCCAAGTGCCACAATTCCAATGAGTATTTGGTGGTTAGTTCCTCAGTACTTGTTGTATGGACTTGCCGATGTTTTCACCATGGTTGGTATGCAAGAGTTCTTCTACGATCAGGTACCAAATGAATTAAGAAGCGTAGGACTTGCCCTCTACCTCAGTATTATTGGGGTGGGAAGCTTTCTGAGCAGCTTTCTTATTTCAATTATTGAGGATGCAACCAGTGCTGCTGGGCAAACTAGCTGGTTTTCGGATAACCTTAATACTGCACATCTTGATTACTTTTATTGGTTACTAGCTGCACTCAGTGCAGTAGGATTGGCGGTCTACATTTATTTTGCAAAATCTTACATTTATAATAGGGGTAGCACAGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

558

Amino Acids

61.03

Weight (kDa)

5.0

Isoelectric Point (pI)

41.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 55 - 495 2.3e-14 Major Facilitator Superfamily
PTR2 PF00854 108 - 515 8.3e-101 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1653
AasI GACNNNNNNGTC 1 cut(s) 59
AatII GACGTC 1 cut(s) 60
Acc65I GGTACC 1 cut(s) 1414
AccB1I GGYRCC 2 cut(s) 68, 1414
AccI GTMKAC 4 cut(s) 63, 224, 984, 1623
AccII CGCG 1 cut(s) 881
AclI AACGTT 1 cut(s) 197
AclWI GGATC 4 cut(s) 96, 298, 506, 655
AcoI YGGCCR 2 cut(s) 228, 384
AcsI RAATTY 1 cut(s) 642
AcuI CTGAAG 2 cut(s) 777, 828
AcyI GRCGYC 3 cut(s) 57, 69, 269
AdeI CACNNNGTG 1 cut(s) 1604
AfaI GTAC 6 cut(s) 414, 557, 916, 991, 1349, 1416
AfiI CCNNNNNNNGG 3 cut(s) 117, 287, 967
AgeI ACCGGT 1 cut(s) 702
AgsI TTSAA 4 cut(s) 410, 547, 1196, 1500
AhlI ACTAGT 1 cut(s) 785
Alw26I GTCTC 2 cut(s) 23, 595
AlwI GGATC 4 cut(s) 96, 298, 506, 655
AoxI GGCC 7 cut(s) 85, 93, 209, 228, 384, 600, 1099
ApeKI GCWGC 6 cut(s) 764, 1076, 1244, 1485, 1523, 1595
ApoI RAATTY 1 cut(s) 642
ArsI GACNNNNNNTTYG 2 cut(s) 1124, 1156
AsiGI ACCGGT 1 cut(s) 702
Asp718I GGTACC 1 cut(s) 1414
AspLEI GCGC 4 cut(s) 71, 123, 783, 883
AspS9I GGNCC 2 cut(s) 94, 209
AsuC2I CCSGG 1 cut(s) 1059
AsuHPI GGTGA 5 cut(s) 5, 15, 1012, 1156, 1369
BaeGI GKGCMC 1 cut(s) 465
BaeI ACNNNNGTAYC 2 cut(s) 547, 580
BanI GGYRCC 2 cut(s) 68, 1414
BbsI GAAGAC 1 cut(s) 57
BbvCI CCTCAGC 1 cut(s) 924
BbvI GCAGC 6 cut(s) 751, 1088, 1256, 1497, 1510, 1582
BccI CCATC 2 cut(s) 497, 926
BceAI ACGGC 5 cut(s) 82, 196, 243, 249, 282
BcnI CCSGG 1 cut(s) 1059
BcoDI GTCTC 2 cut(s) 23, 595
BcuI ACTAGT 1 cut(s) 785
BfaI CTAG 5 cut(s) 440, 693, 786, 1536, 1592
BfmI CTRYAG 1 cut(s) 1085
BfoI RGCGCY 2 cut(s) 72, 124
BglI GCCNNNNNGGC 2 cut(s) 217, 236
BisI GCNGC 9 cut(s) 72, 237, 339, 765, 1077, 1245, 1486, 1524, 1596
BlsI GCNGC 9 cut(s) 73, 238, 340, 766, 1078, 1246, 1487, 1525, 1597
BmcAI AGTACT 2 cut(s) 414, 1349
Bme1390I CCNGG 1 cut(s) 1059
BmgT120I GGNCC 2 cut(s) 94, 209
BmiI GGNNCC 5 cut(s) 70, 210, 826, 1268, 1416
BmrFI CCNGG 1 cut(s) 1059
BmrI ACTGGG 1 cut(s) 1218
BmsI GCATC 2 cut(s) 720, 1501
BmuI ACTGGG 1 cut(s) 1218
BpiI GAAGAC 1 cut(s) 57
Bpu10I CCTNAGC 1 cut(s) 924
BpuMI CCSGG 1 cut(s) 1059
BsaBI GATNNNNATC 1 cut(s) 1287
BsaHI GRCGYC 3 cut(s) 57, 69, 269
BsaI GGTCTC 1 cut(s) 23
BsaJI CCNNGG 5 cut(s) 231, 313, 820, 1057, 1380
BsaWI WCCGGW 2 cut(s) 25, 702
Bsc4I CCNNNNNNNGG 3 cut(s) 117, 287, 967
Bse118I RCCGGY 1 cut(s) 702
Bse1I ACTGG 3 cut(s) 782, 1213, 1518
Bse8I GATNNNNATC 1 cut(s) 1287
BseDI CCNNGG 5 cut(s) 231, 313, 820, 1057, 1380
BseGI GGATG 1 cut(s) 1516
BseJI GATNNNNATC 1 cut(s) 1287
BseLI CCNNNNNNNGG 3 cut(s) 117, 287, 967
BseMII CTCAG 6 cut(s) 416, 915, 1358, 1468, 1472, 1615
BseNI ACTGG 3 cut(s) 782, 1213, 1518
BseRI GAGGAG 3 cut(s) 338, 533, 737
BseSI GKGCMC 1 cut(s) 465
BseXI GCAGC 6 cut(s) 751, 1088, 1256, 1497, 1510, 1582
BseYI CCCAGC 2 cut(s) 624, 1526
BsgI GTGCAG 4 cut(s) 591, 1548, 1581, 1626
Bsh1236I CGCG 1 cut(s) 881
Bsh1285I CGRYCG 3 cut(s) 297, 319, 1135
BshFI GGCC 7 cut(s) 87, 95, 211, 230, 386, 602, 1101
BshNI GGYRCC 2 cut(s) 68, 1414
BshTI ACCGGT 1 cut(s) 702
BsiEI CGRYCG 3 cut(s) 297, 319, 1135
BsiSI CCGG 5 cut(s) 26, 92, 111, 703, 1059
BslFI GGGAC 2 cut(s) 375, 1040
BslI CCNNNNNNNGG 3 cut(s) 117, 287, 967
BsmAI GTCTC 2 cut(s) 23, 595
BsmFI GGGAC 2 cut(s) 375, 1040
BsnI GGCC 7 cut(s) 87, 95, 211, 230, 386, 602, 1101
Bso31I GGTCTC 1 cut(s) 23
Bsp1286I GDGCHC 1 cut(s) 465
Bsp143I GATC 8 cut(s) 101, 290, 493, 511, 660, 1288, 1297, 1408
Bsp19I CCATGG 1 cut(s) 1380
BspANI GGCC 7 cut(s) 87, 95, 211, 230, 386, 602, 1101
BspCNI CTCAG 6 cut(s) 415, 916, 1357, 1467, 1473, 1614
BspFNI CGCG 1 cut(s) 881
BspLI GGNNCC 5 cut(s) 70, 210, 826, 1268, 1416
BspMAI CTGCAG 1 cut(s) 1089
BspPI GGATC 4 cut(s) 96, 298, 506, 655
BspT107I GGYRCC 2 cut(s) 68, 1414
BspTNI GGTCTC 1 cut(s) 23
BsrFI RCCGGY 1 cut(s) 702
BsrI ACTGG 3 cut(s) 782, 1213, 1518
BssAI RCCGGY 1 cut(s) 702
BssECI CCNNGG 5 cut(s) 231, 313, 820, 1057, 1380
BssMI GATC 8 cut(s) 101, 290, 493, 511, 660, 1288, 1297, 1408
BssNAI GTATAC 1 cut(s) 985
BssNI GRCGYC 3 cut(s) 57, 69, 269
BssT1I CCWWGG 1 cut(s) 1380
Bst1107I GTATAC 1 cut(s) 985
Bst4CI ACNGT 6 cut(s) 417, 589, 989, 994, 1005, 1669
Bst6I CTCTTC 1 cut(s) 804
BstACI GRCGYC 3 cut(s) 57, 69, 269
BstAPI GCANNNNNTGC 2 cut(s) 1520, 1604
BstC8I GCNNGC 4 cut(s) 97, 574, 578, 879
BstDEI CTNAG 9 cut(s) 46, 402, 620, 924, 950, 1344, 1454, 1481, 1601
BstDSI CCRYGG 3 cut(s) 231, 820, 1380
BstF5I GGATG 1 cut(s) 1516
BstFNI CGCG 1 cut(s) 881
BstH2I RGCGCY 2 cut(s) 72, 124
BstHHI GCGC 4 cut(s) 71, 123, 783, 883
BstKTI GATC 8 cut(s) 104, 293, 496, 514, 663, 1291, 1300, 1411
BstMAI GTCTC 2 cut(s) 23, 595
BstMBI GATC 8 cut(s) 101, 290, 493, 511, 660, 1288, 1297, 1408
BstMCI CGRYCG 3 cut(s) 297, 319, 1135
BstMWI GCNNNNNNNGC 9 cut(s) 120, 217, 236, 460, 488, 878, 1482, 1520, 1604
BstNSI RCATGY 1 cut(s) 978
BstSCI CCNGG 1 cut(s) 1057
BstSFI CTRYAG 1 cut(s) 1085
BstSLI GKGCMC 1 cut(s) 465
BstUI CGCG 1 cut(s) 881
BstV1I GCAGC 6 cut(s) 751, 1088, 1256, 1497, 1510, 1582
BstV2I GAAGAC 1 cut(s) 57
BstX2I RGATCY 1 cut(s) 511
BstYI RGATCY 1 cut(s) 511
BstZ17I GTATAC 1 cut(s) 985
BsuRI GGCC 7 cut(s) 87, 95, 211, 230, 386, 602, 1101
BtgI CCRYGG 3 cut(s) 231, 820, 1380
BtgZI GCGATG 1 cut(s) 904
BtsCI GGATG 1 cut(s) 1516
BtsI GCAGTG 1 cut(s) 1082
BtsIMutI CAGTG 4 cut(s) 668, 1082, 1525, 1609
Cac8I GCNNGC 4 cut(s) 97, 574, 578, 879
CfoI GCGC 4 cut(s) 71, 123, 783, 883
Cfr10I RCCGGY 1 cut(s) 702
Cfr13I GGNCC 2 cut(s) 94, 209
CseI GACGC 1 cut(s) 258
Csp6I GTAC 6 cut(s) 413, 556, 915, 990, 1348, 1415
CspAI ACCGGT 1 cut(s) 702
CviAII CATG 4 cut(s) 17, 388, 975, 1381
CviQI GTAC 6 cut(s) 413, 556, 915, 990, 1348, 1415
DdeI CTNAG 9 cut(s) 46, 402, 620, 924, 950, 1344, 1454, 1481, 1601
DinI GGCGCC 1 cut(s) 70
DpnI GATC 8 cut(s) 103, 292, 495, 513, 662, 1290, 1299, 1410
DpnII GATC 8 cut(s) 101, 290, 493, 511, 660, 1288, 1297, 1408
DraIII CACNNNGTG 1 cut(s) 1604
DrdI GACNNNNNNGTC 1 cut(s) 59
DseDI GACNNNNNNGTC 1 cut(s) 59
EaeI YGGCCR 2 cut(s) 228, 384
Eam1104I CTCTTC 1 cut(s) 804
EarI CTCTTC 1 cut(s) 804
EciI GGCGGA 1 cut(s) 254
Eco130I CCWWGG 1 cut(s) 1380
Eco147I AGGCCT 1 cut(s) 87
Eco31I GGTCTC 1 cut(s) 23
Eco57I CTGAAG 2 cut(s) 777, 828
EcoRI GAATTC 1 cut(s) 642
EcoT14I CCWWGG 1 cut(s) 1380
EgeI GGCGCC 1 cut(s) 70
EheI GGCGCC 1 cut(s) 70
ErhI CCWWGG 1 cut(s) 1380
FaeI CATG 4 cut(s) 20, 391, 978, 1384
FaqI GGGAC 2 cut(s) 375, 1040
FatI CATG 4 cut(s) 16, 387, 974, 1380
FauI CCCGC 2 cut(s) 104, 569
FauNDI CATATG 1 cut(s) 254
FblI GTMKAC 4 cut(s) 63, 224, 984, 1623
Fnu4HI GCNGC 9 cut(s) 72, 237, 339, 765, 1077, 1245, 1486, 1524, 1596
FokI GGATG 1 cut(s) 1523
Fsp4HI GCNGC 9 cut(s) 72, 237, 339, 765, 1077, 1245, 1486, 1524, 1596
FspBI CTAG 5 cut(s) 440, 693, 786, 1536, 1592
GlaI GCGC 4 cut(s) 70, 122, 782, 882
GluI GCNGC 9 cut(s) 72, 237, 339, 765, 1077, 1245, 1486, 1524, 1596
GsaI CCCAGC 2 cut(s) 628, 1530
HaeII RGCGCY 2 cut(s) 72, 124
HaeIII GGCC 7 cut(s) 87, 95, 211, 230, 386, 602, 1101
HapII CCGG 5 cut(s) 26, 92, 111, 703, 1059
HgaI GACGC 1 cut(s) 258
HhaI GCGC 4 cut(s) 71, 123, 783, 883
Hin1I GRCGYC 3 cut(s) 57, 69, 269
Hin1II CATG 4 cut(s) 20, 391, 978, 1384
Hin6I GCGC 4 cut(s) 69, 121, 781, 881
HinP1I GCGC 4 cut(s) 69, 121, 781, 881
HincII GTYRAC 3 cut(s) 64, 225, 375
HindII GTYRAC 3 cut(s) 64, 225, 375
HindIII AAGCTT 1 cut(s) 1474
HinfI GANTC 6 cut(s) 20, 177, 305, 391, 744, 815
HpaII CCGG 5 cut(s) 26, 92, 111, 703, 1059
HphI GGTGA 5 cut(s) 5, 15, 1012, 1156, 1369
Hpy166II GTNNAC 8 cut(s) 64, 225, 250, 375, 915, 985, 1008, 1624
Hpy188I TCNGA 6 cut(s) 192, 204, 808, 847, 1482, 1549
Hpy188III TCNNGA 3 cut(s) 261, 515, 1571
Hpy8I GTNNAC 8 cut(s) 64, 225, 250, 375, 915, 985, 1008, 1624
Hpy99I CGWCG 7 cut(s) 59, 62, 65, 68, 229, 274, 302
HpyAV CCTTC 5 cut(s) 98, 142, 319, 405, 801
HpyCH4III ACNGT 6 cut(s) 417, 589, 989, 994, 1005, 1669
HpyCH4IV ACGT 2 cut(s) 57, 197
HpyF10VI GCNNNNNNNGC 9 cut(s) 120, 217, 236, 460, 488, 878, 1482, 1520, 1604
HpyF3I CTNAG 9 cut(s) 46, 402, 620, 924, 950, 1344, 1454, 1481, 1601
HpySE526I ACGT 2 cut(s) 57, 197
Hsp92I GRCGYC 3 cut(s) 57, 69, 269
Hsp92II CATG 4 cut(s) 20, 391, 978, 1384
HspAI GCGC 4 cut(s) 69, 121, 781, 881
KasI GGCGCC 1 cut(s) 68
KpnI GGTACC 1 cut(s) 1418
Kzo9I GATC 8 cut(s) 101, 290, 493, 511, 660, 1288, 1297, 1408
LmnI GCTCC 3 cut(s) 128, 188, 1272
Lsp1109I GCAGC 6 cut(s) 751, 1088, 1256, 1497, 1510, 1582
LweI GCATC 2 cut(s) 720, 1501
MaeI CTAG 5 cut(s) 440, 693, 786, 1536, 1592
MaeII ACGT 2 cut(s) 57, 197
MaeIII GTNAC 1 cut(s) 1587
MalI GATC 8 cut(s) 103, 292, 495, 513, 662, 1290, 1299, 1410
MboI GATC 8 cut(s) 101, 290, 493, 511, 660, 1288, 1297, 1408
MboII GAAGA 9 cut(s) 62, 390, 415, 418, 535, 821, 1009, 1292, 1393
MfeI CAATTG 1 cut(s) 547
MflI RGATCY 1 cut(s) 511
MhlI GDGCHC 1 cut(s) 465
MluCI AATT 5 cut(s) 547, 642, 1314, 1424, 1500
Mly113I GGCGCC 1 cut(s) 69
MmeI TCCRAC 1 cut(s) 1172
MseI TTAA 3 cut(s) 35, 1427, 1557
MslI CAYNNNNRTG 2 cut(s) 1187, 1232
MspA1I CMGCKG 1 cut(s) 74
MspI CCGG 5 cut(s) 26, 92, 111, 703, 1059
MspR9I CCNGG 1 cut(s) 1059
MunI CAATTG 1 cut(s) 547
MvnI CGCG 1 cut(s) 881
MwoI GCNNNNNNNGC 9 cut(s) 120, 217, 236, 460, 488, 878, 1482, 1520, 1604
NarI GGCGCC 1 cut(s) 69
NciI CCSGG 1 cut(s) 1059
NcoI CCATGG 1 cut(s) 1380
NdeI CATATG 1 cut(s) 254
NdeII GATC 8 cut(s) 101, 290, 493, 511, 660, 1288, 1297, 1408
NlaIII CATG 4 cut(s) 20, 391, 978, 1384
NlaIV GGNNCC 5 cut(s) 70, 210, 826, 1268, 1416
NspI RCATGY 1 cut(s) 978
PceI AGGCCT 1 cut(s) 87
PcsI WCGNNNNNNNCGW 1 cut(s) 60
PfeI GAWTC 6 cut(s) 20, 177, 305, 391, 744, 815
PflFI GACNNNGTC 3 cut(s) 56, 59, 379
PinAI ACCGGT 1 cut(s) 702
PkrI GCNGC 9 cut(s) 73, 238, 340, 766, 1078, 1246, 1487, 1525, 1597
PluTI GGCGCC 1 cut(s) 72
PsiI TTATAA 1 cut(s) 1653
Psp1406I AACGTT 1 cut(s) 197
PspFI CCCAGC 2 cut(s) 624, 1526
PspN4I GGNNCC 5 cut(s) 70, 210, 826, 1268, 1416
PspPI GGNCC 2 cut(s) 94, 209
PstI CTGCAG 1 cut(s) 1089
PsuI RGATCY 1 cut(s) 511
PsyI GACNNNGTC 3 cut(s) 56, 59, 379
RsaI GTAC 6 cut(s) 414, 557, 916, 991, 1349, 1416
RsaNI GTAC 6 cut(s) 413, 556, 915, 990, 1348, 1415
RseI CAYNNNNRTG 2 cut(s) 1187, 1232
SalI GTCGAC 2 cut(s) 62, 223
SaqAI TTAA 3 cut(s) 35, 1427, 1557
SatI GCNGC 9 cut(s) 72, 237, 339, 765, 1077, 1245, 1486, 1524, 1596
Sau3AI GATC 8 cut(s) 101, 290, 493, 511, 660, 1288, 1297, 1408
Sau96I GGNCC 2 cut(s) 94, 209
ScaI AGTACT 2 cut(s) 414, 1349
ScrFI CCNGG 1 cut(s) 1059
SduI GDGCHC 1 cut(s) 465
SfaNI GCATC 2 cut(s) 720, 1501
SfcI CTRYAG 1 cut(s) 1085
SfoI GGCGCC 1 cut(s) 70
SgrDI CGTCGACG 1 cut(s) 62
SmiMI CAYNNNNRTG 2 cut(s) 1187, 1232
SpeI ACTAGT 1 cut(s) 785
Sse9I AATT 5 cut(s) 547, 642, 1314, 1424, 1500
SseBI AGGCCT 1 cut(s) 87
SspDI GGCGCC 1 cut(s) 68
SspMI CTAG 5 cut(s) 440, 693, 786, 1536, 1592
StuI AGGCCT 1 cut(s) 87
StyD4I CCNGG 1 cut(s) 1057
StyI CCWWGG 1 cut(s) 1380
TaaI ACNGT 6 cut(s) 417, 589, 989, 994, 1005, 1669
TaiI ACGT 2 cut(s) 60, 200
TaqI TCGA 2 cut(s) 63, 224
TaqII GACCGA 2 cut(s) 283, 305
TasI AATT 5 cut(s) 547, 642, 1314, 1424, 1500
TatI WGTACW 2 cut(s) 412, 1347
TauI GCSGC 3 cut(s) 74, 239, 341
TfiI GAWTC 6 cut(s) 20, 177, 305, 391, 744, 815
Tru1I TTAA 3 cut(s) 35, 1427, 1557
Tru9I TTAA 3 cut(s) 35, 1427, 1557
TscAI CASTG 4 cut(s) 675, 1089, 1525, 1609
TseI GCWGC 6 cut(s) 764, 1076, 1244, 1485, 1523, 1595
TspDTI ATGAA 5 cut(s) 33, 124, 911, 1108, 1437
TspGWI ACGGA 1 cut(s) 189
TspRI CASTG 4 cut(s) 675, 1089, 1525, 1609
Tth111I GACNNNGTC 3 cut(s) 56, 59, 379
XapI RAATTY 1 cut(s) 642
XceI RCATGY 1 cut(s) 978
XcmI CCANNNNNNNNNTGG 1 cut(s) 1326
XmiI GTMKAC 4 cut(s) 63, 224, 984, 1623
XspI CTAG 5 cut(s) 440, 693, 786, 1536, 1592
ZraI GACGTC 1 cut(s) 58
ZrmI AGTACT 2 cut(s) 414, 1349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.