Rorug07G0243900

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000191
Physical Location & Seq
Reverse (-)
22518275 .. 22524683
6409 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0243900.1

Sequence Viewer

Length: 1158 bp
ATGAGCAATCCAGCTCATGCTCTTCATGAAGAAGAAGATGACCAAGGTGAGGTTTTTCTCGATGAAGCAGACATCGTTGGTGAAATTGCAGTCGACGAAGAAGATCTTCCTGATGCAGACGATGAAGTTGATGAGCTTGATGATTGCATACACATATTTACTGGTCATAGCGACGAACTATACGCCGTTATATGCAGCCCGACAGATCCTACTTTGGTTGCAACAGGGGGTAAAGATGACAGAGGGTTTCTTTGGAAGATTGGACACGGAGATTGGGCTTTTGAGCTTCAAGGTCATAAGGATTCTGTTTCTAGCTTAGCATTTAGTACTGATGGACAGTTGCTAGCATCTGGAAGCTTGGATGGAATCATCCAAATTTGGGATATAGCATCAGGAAATCTAAAATCTACTTTAGAAGGTCCTGGTGGGGGAATTGAGTGGATCAAGTGGCATCCTAGAGGTCATGTGGTTTTGGCTGGTTCAGAAGACTCTGCAGTTTGGATGTGGAATGCTGACAATGGTTCCTATCTTAATTTATTTTCTGGTCATGGTGGTAGGGTGAGTTGTGGTGACTTTACCCCTGATGGAAAAACAATCTGCACTGGTTCTGCTGATACAACTTTGAGAATATGGAATCCAAAAAGTGGCGAGAGCATTCATGTGGTACAAGGTCACCCATACCATACTACAGGATTGACATGTTTGACAATAAGTTCTGATTCAACTTTAGCTGTTACTGGTTCTGAAGATGGTTCTGTCTATATTGTAAACATAACAACTGGAAAGGTTGTTAGTTCCCTGGTTTCACATTTAGATTCAGTTGAATGTATCGGGCTTGCACCAAGCTCCCCTTGGGCTGCAACTGGAGGTATGGATAAGAAGCTTATTATTTGGGACTTGCAGCATTCATTGCCCCGTTGTACCTGCGAACATGAGGATGGAGTGACATGTTTGACATGGCTGGGCACATCCAGGTATCTAGCAACAGGCTGTATGGATGGGAAGGTTCGGTTATGGGATAGTCTCTCTGGTGATTGCGTAAGAACCTTGAATGGGCACAATGAGCCCATTCAGTCTCTCTCTGTATCTTCCAACCAAGAGTTCATTGTTTCAGTATCTACTGATGGAACTGCCCGAGTTTTTGAGTTACACGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

385

Amino Acids

41.31

Weight (kDa)

4.43

Isoelectric Point (pI)

34.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR36-Utp21_1st PF25171 48 - 172 2.7e-09 WDR36/Utp21 first beta-propeller
Beta-prop_WDR3_1st PF25173 48 - 212 2.1e-30 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 48 - 138 1.4e-17 WDR5 beta-propeller domain
WD40_CDC20-Fz PF24807 49 - 211 4.3e-20 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 49 - 157 5.6e-18 THOC3 beta-propeller domain
Beta-prop_EML PF23409 53 - 172 5.8e-08 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR75_1st PF23869 55 - 158 2.2e-07 WD repeat-containing protein 75 first beta-propeller
WDR55 PF24796 56 - 242 1.8e-12 WDR55
NBCH_WD40 PF20426 58 - 133 9.1e-07 Neurobeachin beta propeller domain
WD40_Gbeta PF25391 61 - 168 4e-11 G protein beta WD-40 repeat protein
WD40_Prp19 PF24814 62 - 228 8.2e-26 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 64 - 138 8.3e-10 WDHD1 first WD40 domain
Beta-prop_WDR3_2nd PF25172 94 - 212 1.8e-18 WDR3 second beta-propeller domain
Beta-prop_TEP1_2nd PF25047 94 - 188 2.1e-09 TEP-1 second beta-propeller
EIF3I PF24805 95 - 177 4e-08 EIF3I
WD40 PF00400 95 - 128 6.3e-11 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 96 - 154 8.2e-06 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5 PF25175 96 - 225 1.4e-34 WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 98 - 222 5.9e-11 WDR36/Utp21 second beta-propeller domain
Beta-prop_THOC3 PF25174 99 - 303 1.1e-36 THOC3 beta-propeller domain
Beta-prop_WDR19_1st PF23389 100 - 222 1.6e-07 WDR19 first beta-propeller
Beta-prop_Aladin PF25460 100 - 200 1e-08 Aladin seven-bladed propeller
EIF3I PF24805 138 - 223 2.3e-12 EIF3I
Beta-prop_CAF1B_HIR1 PF24105 145 - 222 1.3e-06 CAF1B/HIR1 beta-propeller domain
WD40_Gbeta PF25391 147 - 212 1.7e-08 G protein beta WD-40 repeat protein
Beta-prop_Aladin PF25460 147 - 214 8.5e-06 Aladin seven-bladed propeller
WD40_WDHD1_1st PF24817 148 - 226 1.5e-08 WDHD1 first WD40 domain
Beta-prop_EML_2 PF23414 150 - 270 9.3e-12 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 154 - 329 4.3e-11 WDR36/Utp21 second beta-propeller domain
WD40_CDC20-Fz PF24807 164 - 310 1.5e-15 CDC20/Fizzy WD40 domain
WD40 PF00400 176 - 212 2.5e-08 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 179 - 275 3.5e-09 TEP-1 second beta-propeller
Beta-prop_EML PF23409 180 - 378 1.8e-11 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 199 - 323 7.2e-11 WDR36/Utp21 first beta-propeller
Beta-prop_SCAP PF24017 199 - 300 1e-05 SCAP Beta-propeller
Beta-prop_WDR3_1st PF25173 209 - 383 2.3e-30 WDR3 first beta-propeller domain
WD40 PF00400 216 - 255 6e-06 WD domain, G-beta repeat
WD40_Gbeta PF25391 219 - 338 3.6e-07 G protein beta WD-40 repeat protein
WD40_Prp19 PF24814 225 - 328 1.8e-11 Prp19 WD40 domain
EIF3I PF24805 228 - 383 1.4e-11 EIF3I
Beta-prop_WDR5 PF25175 228 - 383 3e-30 WDR5 beta-propeller domain
WD40_WDHD1_1st PF24817 229 - 303 2.7e-07 WDHD1 first WD40 domain
Beta-prop_WDR3_2nd PF25172 230 - 299 1e-07 WDR3 second beta-propeller domain
NBCH_WD40 PF20426 231 - 302 1.1e-06 Neurobeachin beta propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 232 - 384 1.7e-13 WDR36/Utp21 second beta-propeller domain
Beta-prop_ACSF4 PF13570 236 - 381 2e-08 Beta-alanine-activating enzyme, beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 246 - 376 9.8e-12 WDR36/Utp21 first beta-propeller
Beta-prop_TEP1_2nd PF25047 265 - 383 2.9e-15 TEP-1 second beta-propeller
Beta-prop_EML_2 PF23414 279 - 383 4.7e-12 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_2nd PF25172 288 - 382 4.9e-13 WDR3 second beta-propeller domain
WDR55 PF24796 309 - 384 4.8e-09 WDR55
WD40_CDC20-Fz PF24807 310 - 383 1.9e-09 CDC20/Fizzy WD40 domain
WD40 PF00400 310 - 340 1.5e-08 WD domain, G-beta repeat
Beta-prop_THOC3 PF25174 310 - 383 3.1e-13 THOC3 beta-propeller domain
Beta-prop_DCAF4 PF23761 310 - 384 1e-06 DDB1- and CUL4-associated factor 4 beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 311 - 383 4.3e-07 CAF1B/HIR1 beta-propeller domain
WD40_Prp19 PF24814 312 - 383 1.7e-10 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 314 - 384 2.8e-10 WDHD1 first WD40 domain
WD40_MABP1-WDR62_2nd PF24782 323 - 381 5.3e-08 MABP1/WDR62 second WD40 domain
WD40 PF00400 344 - 381 2.3e-07 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 932
AccB7I CCANNNNNTGG 1 cut(s) 644
AccI GTMKAC 1 cut(s) 93
AclWI GGATC 2 cut(s) 200, 449
AcsI RAATTY 1 cut(s) 375
AcuI CTGAAG 1 cut(s) 765
AfaI GTAC 3 cut(s) 328, 666, 922
AfiI CCNNNNNNNGG 5 cut(s) 49, 379, 428, 644, 1053
AflIII ACRYGT 2 cut(s) 698, 947
AgsI TTSAA 4 cut(s) 290, 723, 824, 1051
AjnI CCWGG 3 cut(s) 421, 798, 971
AjuI GAANNNNNNNTTGG 2 cut(s) 1085, 1117
AluBI AGCT 8 cut(s) 14, 136, 286, 315, 357, 731, 846, 883
AluI AGCT 8 cut(s) 14, 136, 286, 315, 357, 731, 846, 883
Alw26I GTCTC 2 cut(s) 1028, 1080
AlwI GGATC 2 cut(s) 200, 449
Ama87I CYCGRG 1 cut(s) 1134
ApeKI GCWGC 3 cut(s) 195, 857, 901
ApoI RAATTY 1 cut(s) 375
Asp700I GAANNNNTTC 1 cut(s) 105
AspS9I GGNCC 1 cut(s) 419
AsuHPI GGTGA 6 cut(s) 59, 92, 571, 581, 665, 1043
AsuNHI GCTAGC 1 cut(s) 343
AvaI CYCGRG 1 cut(s) 1134
AvaII GGWCC 1 cut(s) 419
BaeGI GKGCMC 2 cut(s) 968, 1059
BanII GRGCYC 1 cut(s) 1068
BauI CACGAG 1 cut(s) 1151
BbsI GAAGAC 1 cut(s) 492
BbvI GCAGC 3 cut(s) 207, 844, 913
BccI CCATC 7 cut(s) 326, 356, 578, 743, 932, 992, 1118
BceAI ACGGC 1 cut(s) 170
BciT130I CCWGG 3 cut(s) 423, 800, 973
BcoDI GTCTC 2 cut(s) 1028, 1080
BfaI CTAG 4 cut(s) 312, 344, 456, 980
BfmI CTRYAG 2 cut(s) 492, 687
BfuAI ACCTGC 1 cut(s) 932
BglII AGATCT 1 cut(s) 103
BisI GCNGC 3 cut(s) 196, 858, 902
BlpI GCTNAGC 1 cut(s) 316
BlsI GCNGC 3 cut(s) 197, 859, 903
BmcAI AGTACT 1 cut(s) 328
Bme1390I CCNGG 3 cut(s) 423, 800, 973
Bme18I GGWCC 1 cut(s) 419
BmeT110I CYCGRG 1 cut(s) 1134
BmgT120I GGNCC 1 cut(s) 419
BmiI GGNNCC 1 cut(s) 523
BmrFI CCNGG 3 cut(s) 423, 800, 973
BmsI GCATC 4 cut(s) 103, 356, 398, 460
BmtI GCTAGC 1 cut(s) 347
BpiI GAAGAC 1 cut(s) 492
BpmI CTGGAG 1 cut(s) 885
Bpu1102I GCTNAGC 1 cut(s) 316
BsaJI CCNNGG 3 cut(s) 43, 798, 851
Bsc4I CCNNNNNNNGG 5 cut(s) 49, 379, 428, 644, 1053
Bse1I ACTGG 5 cut(s) 166, 607, 742, 784, 868
Bse3DI GCAATG 1 cut(s) 908
BseBI CCWGG 3 cut(s) 423, 800, 973
BseDI CCNNGG 3 cut(s) 43, 798, 851
BseGI GGATG 7 cut(s) 367, 369, 451, 507, 943, 968, 1003
BseLI CCNNNNNNNGG 5 cut(s) 49, 379, 428, 644, 1053
BseMI GCAATG 1 cut(s) 908
BseNI ACTGG 5 cut(s) 166, 607, 742, 784, 868
BseSI GKGCMC 2 cut(s) 968, 1059
BseXI GCAGC 3 cut(s) 207, 844, 913
BseYI CCCAGC 1 cut(s) 961
BsgI GTGCAG 1 cut(s) 583
BsiHKCI CYCGRG 1 cut(s) 1134
BslFI GGGAC 1 cut(s) 908
BslI CCNNNNNNNGG 5 cut(s) 49, 379, 428, 644, 1053
BsmAI GTCTC 2 cut(s) 1028, 1080
BsmFI GGGAC 1 cut(s) 908
BsmI GAATGC 3 cut(s) 514, 654, 904
BsoBI CYCGRG 1 cut(s) 1134
Bsp1286I GDGCHC 3 cut(s) 968, 1059, 1068
Bsp143I GATC 3 cut(s) 103, 205, 441
Bsp1720I GCTNAGC 1 cut(s) 316
BspHI TCATGA 1 cut(s) 25
BspLI GGNNCC 1 cut(s) 523
BspMAI CTGCAG 1 cut(s) 496
BspMI ACCTGC 1 cut(s) 932
BspOI GCTAGC 1 cut(s) 347
BspPI GGATC 2 cut(s) 200, 449
BspQI GCTCTTC 1 cut(s) 27
BsrDI GCAATG 1 cut(s) 908
BsrI ACTGG 5 cut(s) 166, 607, 742, 784, 868
BssECI CCNNGG 3 cut(s) 43, 798, 851
BssMI GATC 3 cut(s) 103, 205, 441
BssSI CACGAG 1 cut(s) 1151
BssT1I CCWWGG 2 cut(s) 43, 851
Bst2BI CACGAG 1 cut(s) 1151
Bst2UI CCWGG 3 cut(s) 423, 800, 973
Bst4CI ACNGT 1 cut(s) 339
Bst6I CTCTTC 1 cut(s) 27
BstAPI GCANNNNNTGC 1 cut(s) 910
BstC8I GCNNGC 2 cut(s) 345, 837
BstDEI CTNAG 1 cut(s) 316
BstEII GGTNACC 1 cut(s) 671
BstF5I GGATG 7 cut(s) 367, 369, 451, 507, 943, 968, 1003
BstKTI GATC 3 cut(s) 106, 208, 444
BstMAI GTCTC 2 cut(s) 1028, 1080
BstMBI GATC 3 cut(s) 103, 205, 441
BstMWI GCNNNNNNNGC 2 cut(s) 910, 1063
BstNI CCWGG 3 cut(s) 423, 800, 973
BstNSI RCATGY 2 cut(s) 702, 951
BstPI GGTNACC 1 cut(s) 671
BstSCI CCNGG 3 cut(s) 421, 798, 971
BstSFI CTRYAG 2 cut(s) 492, 687
BstSLI GKGCMC 2 cut(s) 968, 1059
BstV1I GCAGC 3 cut(s) 207, 844, 913
BstV2I GAAGAC 1 cut(s) 492
BstX2I RGATCY 2 cut(s) 103, 205
BstYI RGATCY 2 cut(s) 103, 205
BtsCI GGATG 7 cut(s) 367, 369, 451, 507, 943, 968, 1003
BtsIMutI CAGTG 1 cut(s) 600
BveI ACCTGC 1 cut(s) 932
Cac8I GCNNGC 2 cut(s) 345, 837
CciI TCATGA 1 cut(s) 25
Cfr13I GGNCC 1 cut(s) 419
Csp6I GTAC 3 cut(s) 327, 665, 921
CviAII CATG 9 cut(s) 17, 26, 464, 548, 659, 699, 932, 948, 957
CviQI GTAC 3 cut(s) 327, 665, 921
DdeI CTNAG 1 cut(s) 316
DpnI GATC 3 cut(s) 105, 207, 443
DpnII GATC 3 cut(s) 103, 205, 441
Eam1104I CTCTTC 1 cut(s) 27
EarI CTCTTC 1 cut(s) 27
Eco130I CCWWGG 2 cut(s) 43, 851
Eco24I GRGCYC 1 cut(s) 1068
Eco47I GGWCC 1 cut(s) 419
Eco57I CTGAAG 1 cut(s) 765
Eco88I CYCGRG 1 cut(s) 1134
Eco91I GGTNACC 1 cut(s) 671
EcoO109I RGGNCCY 1 cut(s) 419
EcoO65I GGTNACC 1 cut(s) 671
EcoRII CCWGG 3 cut(s) 421, 798, 971
EcoT14I CCWWGG 2 cut(s) 43, 851
EcoT38I GRGCYC 1 cut(s) 1068
ErhI CCWWGG 2 cut(s) 43, 851
FaeI CATG 9 cut(s) 20, 29, 467, 551, 662, 702, 935, 951, 960
FalI AAGNNNNNCTT 4 cut(s) 90, 122, 835, 867
FaqI GGGAC 1 cut(s) 908
FatI CATG 9 cut(s) 16, 25, 463, 547, 658, 698, 931, 947, 956
FblI GTMKAC 1 cut(s) 93
Fnu4HI GCNGC 3 cut(s) 196, 858, 902
FokI GGATG 7 cut(s) 356, 374, 438, 514, 950, 955, 1010
FriOI GRGCYC 1 cut(s) 1068
Fsp4HI GCNGC 3 cut(s) 196, 858, 902
FspBI CTAG 4 cut(s) 312, 344, 456, 980
GluI GCNGC 3 cut(s) 196, 858, 902
GsaI CCCAGC 1 cut(s) 965
GsuI CTGGAG 1 cut(s) 885
Hin1II CATG 9 cut(s) 20, 29, 467, 551, 662, 702, 935, 951, 960
HincII GTYRAC 1 cut(s) 94
HindII GTYRAC 1 cut(s) 94
HindIII AAGCTT 2 cut(s) 355, 881
HinfI GANTC 6 cut(s) 302, 366, 488, 634, 719, 815
HphI GGTGA 6 cut(s) 59, 92, 571, 581, 665, 1043
Hpy166II GTNNAC 2 cut(s) 94, 769
Hpy188I TCNGA 3 cut(s) 484, 718, 745
Hpy188III TCNNGA 5 cut(s) 26, 59, 110, 351, 393
Hpy8I GTNNAC 2 cut(s) 94, 769
Hpy99I CGWCG 2 cut(s) 98, 176
HpyAV CCTTC 2 cut(s) 410, 997
HpyCH4III ACNGT 1 cut(s) 339
HpyF10VI GCNNNNNNNGC 2 cut(s) 910, 1063
HpyF3I CTNAG 1 cut(s) 316
Hsp92II CATG 9 cut(s) 20, 29, 467, 551, 662, 702, 935, 951, 960
Kzo9I GATC 3 cut(s) 103, 205, 441
LguI GCTCTTC 1 cut(s) 27
LmnI GCTCC 1 cut(s) 851
Lsp1109I GCAGC 3 cut(s) 207, 844, 913
LweI GCATC 4 cut(s) 103, 356, 398, 460
MaeI CTAG 4 cut(s) 312, 344, 456, 980
MaeIII GTNAC 5 cut(s) 569, 671, 733, 943, 1146
MalI GATC 3 cut(s) 105, 207, 443
MboI GATC 3 cut(s) 103, 205, 441
MflI RGATCY 2 cut(s) 103, 205
MhlI GDGCHC 3 cut(s) 968, 1059, 1068
MluCI AATT 4 cut(s) 84, 375, 432, 532
MlyI GAGTC 1 cut(s) 482
MmeI TCCRAC 1 cut(s) 1116
MnlI CCTC 5 cut(s) 43, 236, 452, 860, 928
MroXI GAANNNNTTC 1 cut(s) 105
MseI TTAA 1 cut(s) 531
MslI CAYNNNNRTG 2 cut(s) 659, 936
MspR9I CCNGG 3 cut(s) 423, 800, 973
Mva1269I GAATGC 3 cut(s) 514, 654, 904
MvaI CCWGG 3 cut(s) 423, 800, 973
MwoI GCNNNNNNNGC 2 cut(s) 910, 1063
NdeII GATC 3 cut(s) 103, 205, 441
NheI GCTAGC 1 cut(s) 343
NlaIII CATG 9 cut(s) 20, 29, 467, 551, 662, 702, 935, 951, 960
NlaIV GGNNCC 1 cut(s) 523
NmuCI GTSAC 3 cut(s) 569, 671, 943
NspI RCATGY 2 cut(s) 702, 951
PagI TCATGA 1 cut(s) 25
PciI ACATGT 2 cut(s) 698, 947
PciSI GCTCTTC 1 cut(s) 27
PctI GAATGC 3 cut(s) 514, 654, 904
PdmI GAANNNNTTC 1 cut(s) 105
PfeI GAWTC 5 cut(s) 302, 366, 634, 719, 815
PflMI CCANNNNNTGG 1 cut(s) 644
PkrI GCNGC 3 cut(s) 197, 859, 903
PleI GAGTC 1 cut(s) 482
PpsI GAGTC 1 cut(s) 482
PpuMI RGGWCCY 1 cut(s) 419
PscI ACATGT 2 cut(s) 698, 947
Psp5II RGGWCCY 1 cut(s) 419
Psp6I CCWGG 3 cut(s) 421, 798, 971
PspEI GGTNACC 1 cut(s) 671
PspFI CCCAGC 1 cut(s) 961
PspGI CCWGG 3 cut(s) 421, 798, 971
PspN4I GGNNCC 1 cut(s) 523
PspPI GGNCC 1 cut(s) 419
PspPPI RGGWCCY 1 cut(s) 419
PstI CTGCAG 1 cut(s) 496
PsuI RGATCY 2 cut(s) 103, 205
RsaI GTAC 3 cut(s) 328, 666, 922
RsaNI GTAC 3 cut(s) 327, 665, 921
RseI CAYNNNNRTG 2 cut(s) 659, 936
SalI GTCGAC 1 cut(s) 92
SapI GCTCTTC 1 cut(s) 27
SaqAI TTAA 1 cut(s) 531
SatI GCNGC 3 cut(s) 196, 858, 902
Sau3AI GATC 3 cut(s) 103, 205, 441
Sau96I GGNCC 1 cut(s) 419
ScaI AGTACT 1 cut(s) 328
SchI GAGTC 1 cut(s) 482
ScrFI CCNGG 3 cut(s) 423, 800, 973
SduI GDGCHC 3 cut(s) 968, 1059, 1068
SfaNI GCATC 4 cut(s) 103, 356, 398, 460
SfcI CTRYAG 2 cut(s) 492, 687
SinI GGWCC 1 cut(s) 419
SmiMI CAYNNNNRTG 2 cut(s) 659, 936
Sse9I AATT 4 cut(s) 84, 375, 432, 532
SspMI CTAG 4 cut(s) 312, 344, 456, 980
StyD4I CCNGG 3 cut(s) 421, 798, 971
StyI CCWWGG 2 cut(s) 43, 851
TaaI ACNGT 1 cut(s) 339
TaqI TCGA 2 cut(s) 60, 93
TasI AATT 4 cut(s) 84, 375, 432, 532
TatI WGTACW 1 cut(s) 326
TfiI GAWTC 5 cut(s) 302, 366, 634, 719, 815
Tru1I TTAA 1 cut(s) 531
Tru9I TTAA 1 cut(s) 531
TscAI CASTG 1 cut(s) 607
TseFI GTSAC 3 cut(s) 569, 671, 943
TseI GCWGC 3 cut(s) 195, 857, 901
Tsp45I GTSAC 3 cut(s) 569, 671, 943
TspDTI ATGAA 7 cut(s) 14, 42, 78, 138, 647, 897, 1093
TspGWI ACGGA 1 cut(s) 282
TspRI CASTG 1 cut(s) 607
Van91I CCANNNNNTGG 1 cut(s) 644
VpaK11BI GGWCC 1 cut(s) 419
XapI RAATTY 1 cut(s) 375
XceI RCATGY 2 cut(s) 702, 951
XcmI CCANNNNNNNNNTGG 1 cut(s) 849
XmiI GTMKAC 1 cut(s) 93
XmnI GAANNNNTTC 1 cut(s) 105
XspI CTAG 4 cut(s) 312, 344, 456, 980
ZrmI AGTACT 1 cut(s) 328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.