Rroxscaffold_3G00231940

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000191
Physical Location & Seq
Forward (+)
17468409 .. 17471924
3516 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00231940.1

Sequence Viewer

Length: 1758 bp
ATGGCTACATCTCTCGAAGAATATCCGGAGACCCGAACTCCACTCCTAGACGACGTCGTAGACGGCGCCGTTGATTACAAAGGCCATCAGGTCCACAGATCAACCTCCGGCGGTTGGCGTTCCGCATCCTTCATAATAGGGGTCGAAGTTGCGGAGAGGTTCGCCTACAGTGGAATAAGCTCGAATCTGATAACGTTTCTGACGGGACAGTTGGGACAGTCGACGGTGACGGCGGCGGAGAATGTGAACATATGGTCCGGAACGGCGCAGTTGCTTCCTCTACTGGGAGCATTCGTGGCGGATTCTTTTCTGGGTCGCTATCGCACCATTATTGTTGCTTCTCTCCTCTACATTTTGGGACTCGGCTTGTTGACCGTGTCGGCCGTTCTTCCTTTTTCTCAGCTTCAAATAGTGTTATTCTTCTTCTCTCTATATCTAGCAGCAGTTGGGCAAGGCGGACACAAGCCCTGTGTTCAGGCTTTCGGGGCAGATCAGTTTGATGGACAAGATCCAGAGGAGTGCAAAGCGAAAAGCTCATTCTTCAATTGGTGGTACTTCGGTATCTGTGCAGGCTCGCTATTCACAGTCTCAATATTGGTCTACATACAGGACAATCTAAGCTGGGGTCTGGGTTTTGGAATTCCTTGTGTTGTAATGGTCCTTGCACTGATTATTTTTGTCAGTGGAACTCGGACATACCGGTATAGCATCAAAGGGGAGGAGGAAAGCCCATTTGTGAGAATTGGCAAGGTTTTTGTTGCTGCATTAAGGAACCGTCGAACTAGACCTTCAGCAATAGCTTCTGAAGAGGAATCCCATGGAAACTTGCCTGATCAAAGTTTTGAACAATTCAAGTTCTTATCAAGTGTTTATATCTCCCATTTGGCTCCTGTCCAATATCAGTTTTACATAGCATATAACGAAGATTGTTCCTCAAACAAAGCGTTGCTCGCACCAGATGATTTGGAGAAAAACAGGAAGGTGTGTACCATCGCTGAGGTTGAGGAAGCAAAGGCTGTTCTTAGGCTGTTTCCAATATGGGCTACATGCTTGCCATATGCTATTGTATATGCACAGTCCACTACATTCTTCACCAAGCAAGGTGCCACCATGGATAGAACTATTGTTCCCGGTGTTTACATACCAGCTGCTTCACTTCAGTCATTTATCAACCTTGCCATATTGATGATCATACCCATTTATGACCGCATTTTTGTTCCAATGGCAAGAGCTTTCACCAGAGAACCCTCTGGCATTACAATGCTACAAAGAATCGGAACTGGGATGTTTTTCTCTATCATATCTATGGTCGTTGCAGCTTTAGTTGAGATGAAAAGGCTCCAAACTGCCAAAGATTATGATCTGGTTGATCTGCCAAGTGCCACAATTCCAATGAGTATTTGGTGGTTGGTTCCTCAGTACTTTCTTTATGGACTTGCCGATGTTTTCACCATTGTTGGTCTACAAGAGTTCTTCTATGATCAGGTACCAAATGAATTAAGAAGCATAGGACTTGCCCTCTACCTCAGTATATTTGGTGTGGGAAGCTTTCTGAGTAGCTTTCTTATCTCTATTATTGAGGAAGCAACCAGTTGGGGAGGCCACACTAGCTGGTTTTCCGACAACCTTAATCTTGCACATCTTGATTACTTTTACTGGTTACTAGCAGCACTCAGTGCAGTAGGATTGTTGGCCTACATGTATTTTGCAAAATCTTACATTTATAATAGGGCTAGTACAATATCAACACAAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

585

Amino Acids

64.99

Weight (kDa)

5.32

Isoelectric Point (pI)

40.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 53 - 519 3.8e-11 Major Facilitator Superfamily
PTR2 PF00854 107 - 538 3.3e-97 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1725
AatII GACGTC 1 cut(s) 57
Acc65I GGTACC 1 cut(s) 1486
AccB1I GGYRCC 3 cut(s) 65, 1103, 1486
AccI GTMKAC 4 cut(s) 60, 221, 600, 1462
AccIII TCCGGA 2 cut(s) 25, 257
AciI CCGC 8 cut(s) 111, 123, 152, 233, 236, 299, 456, 1207
AclI AACGTT 1 cut(s) 194
AclWI GGATC 1 cut(s) 503
AcoI YGGCCR 1 cut(s) 381
AcsI RAATTY 1 cut(s) 639
AcuI CTGAAG 3 cut(s) 774, 825, 1142
AcyI GRCGYC 2 cut(s) 54, 66
AdeI CACNNNGTG 1 cut(s) 1676
AfaI GTAC 5 cut(s) 554, 988, 1421, 1488, 1738
AfiI CCNNNNNNNGG 2 cut(s) 114, 284
AflIII ACRYGT 1 cut(s) 1698
AgeI ACCGGT 1 cut(s) 699
AgsI TTSAA 4 cut(s) 407, 544, 845, 853
AloI GAACNNNNNNTCC 4 cut(s) 239, 271, 1111, 1143
Alw26I GTCTC 2 cut(s) 23, 592
AlwI GGATC 1 cut(s) 503
Aor13HI TCCGGA 2 cut(s) 25, 257
AoxI GGCC 4 cut(s) 82, 381, 1600, 1692
ApeKI GCWGC 5 cut(s) 440, 761, 1148, 1316, 1667
ApoI RAATTY 1 cut(s) 639
ArsI GACNNNNNNTTYG 2 cut(s) 1196, 1228
AsiGI ACCGGT 1 cut(s) 699
Asp718I GGTACC 1 cut(s) 1486
AspLEI GCGC 2 cut(s) 68, 268
AspS9I GGNCC 3 cut(s) 91, 255, 658
AsuC2I CCSGG 1 cut(s) 1131
AsuHPI GGTGA 4 cut(s) 238, 1084, 1228, 1441
AvaII GGWCC 3 cut(s) 91, 255, 658
BaeI ACNNNNGTAYC 4 cut(s) 544, 544, 577, 577
BanI GGYRCC 3 cut(s) 65, 1103, 1486
BbvCI CCTCAGC 1 cut(s) 996
BbvI GCAGC 5 cut(s) 452, 748, 1135, 1328, 1679
BccI CCATC 3 cut(s) 93, 494, 998
BceAI ACGGC 5 cut(s) 53, 79, 246, 279, 368
BclI TGATCA 3 cut(s) 832, 1188, 1480
BcnI CCSGG 1 cut(s) 1131
BcoDI GTCTC 2 cut(s) 23, 592
BfaI CTAG 6 cut(s) 47, 437, 783, 1608, 1664, 1734
BfmI CTRYAG 1 cut(s) 166
BfoI RGCGCY 1 cut(s) 69
BisI GCNGC 6 cut(s) 234, 441, 762, 1149, 1317, 1668
BlsI GCNGC 6 cut(s) 235, 442, 763, 1150, 1318, 1669
BmcAI AGTACT 1 cut(s) 1421
Bme1390I CCNGG 1 cut(s) 1131
Bme18I GGWCC 3 cut(s) 91, 255, 658
BmgT120I GGNCC 3 cut(s) 91, 255, 658
BmiI GGNNCC 7 cut(s) 67, 773, 888, 1105, 1340, 1413, 1488
BmrFI CCNGG 1 cut(s) 1131
BmrI ACTGGG 2 cut(s) 293, 1290
BmsI GCATC 2 cut(s) 134, 717
BmuI ACTGGG 2 cut(s) 293, 1290
Bpu10I CCTNAGC 1 cut(s) 996
BpuMI CCSGG 1 cut(s) 1131
BsaBI GATNNNNATC 1 cut(s) 1359
BsaHI GRCGYC 2 cut(s) 54, 66
BsaI GGTCTC 1 cut(s) 23
BsaJI CCNNGG 2 cut(s) 817, 1110
BsaWI WCCGGW 3 cut(s) 25, 257, 699
BsaXI ACNNNNNCTCC 4 cut(s) 22, 52, 279, 309
Bsc4I CCNNNNNNNGG 2 cut(s) 114, 284
Bse118I RCCGGY 1 cut(s) 699
Bse1I ACTGG 4 cut(s) 288, 1285, 1590, 1661
Bse8I GATNNNNATC 1 cut(s) 1359
BseAI TCCGGA 2 cut(s) 25, 257
BseDI CCNNGG 2 cut(s) 817, 1110
BseGI GGATG 2 cut(s) 125, 1290
BseJI GATNNNNATC 1 cut(s) 1359
BseLI CCNNNNNNNGG 2 cut(s) 114, 284
BseMII CTCAG 6 cut(s) 413, 987, 1430, 1540, 1544, 1687
BseNI ACTGG 4 cut(s) 288, 1285, 1590, 1661
BseRI GAGGAG 3 cut(s) 335, 530, 734
BseX3I CGGCCG 1 cut(s) 381
BseXI GCAGC 5 cut(s) 452, 748, 1135, 1328, 1679
BseYI CCCAGC 1 cut(s) 621
BsgI GTGCAG 2 cut(s) 588, 1698
Bsh1285I CGRYCG 1 cut(s) 384
BshFI GGCC 4 cut(s) 84, 383, 1602, 1694
BshNI GGYRCC 3 cut(s) 65, 1103, 1486
BshTI ACCGGT 1 cut(s) 699
BsiEI CGRYCG 1 cut(s) 384
BsiSI CCGG 5 cut(s) 26, 108, 258, 700, 1131
BslFI GGGAC 3 cut(s) 219, 228, 372
BslI CCNNNNNNNGG 2 cut(s) 114, 284
BsmAI GTCTC 2 cut(s) 23, 592
BsmFI GGGAC 3 cut(s) 219, 228, 372
BsmI GAATGC 1 cut(s) 290
BsnI GGCC 4 cut(s) 84, 383, 1602, 1694
Bso31I GGTCTC 1 cut(s) 23
Bsp13I TCCGGA 2 cut(s) 25, 257
Bsp143I GATC 8 cut(s) 98, 490, 508, 832, 1188, 1360, 1369, 1480
Bsp19I CCATGG 2 cut(s) 817, 1110
BspACI CCGC 8 cut(s) 111, 123, 152, 233, 236, 299, 456, 1207
BspANI GGCC 4 cut(s) 84, 383, 1602, 1694
BspCNI CTCAG 6 cut(s) 412, 988, 1429, 1539, 1545, 1686
BspEI TCCGGA 2 cut(s) 25, 257
BspLI GGNNCC 7 cut(s) 67, 773, 888, 1105, 1340, 1413, 1488
BspPI GGATC 1 cut(s) 503
BspT107I GGYRCC 3 cut(s) 65, 1103, 1486
BspTNI GGTCTC 1 cut(s) 23
BsrFI RCCGGY 1 cut(s) 699
BsrI ACTGG 4 cut(s) 288, 1285, 1590, 1661
BssAI RCCGGY 1 cut(s) 699
BssECI CCNNGG 2 cut(s) 817, 1110
BssMI GATC 8 cut(s) 98, 490, 508, 832, 1188, 1360, 1369, 1480
BssNI GRCGYC 2 cut(s) 54, 66
BssT1I CCWWGG 2 cut(s) 817, 1110
Bst4CI ACNGT 8 cut(s) 170, 210, 219, 226, 376, 586, 776, 1077
Bst6I CTCTTC 1 cut(s) 801
BstACI GRCGYC 2 cut(s) 54, 66
BstAPI GCANNNNNTGC 1 cut(s) 1676
BstC8I GCNNGC 4 cut(s) 571, 575, 951, 1052
BstDEI CTNAG 8 cut(s) 399, 617, 996, 1022, 1416, 1526, 1553, 1673
BstDSI CCRYGG 2 cut(s) 817, 1110
BstF5I GGATG 2 cut(s) 125, 1290
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 2 cut(s) 68, 268
BstKTI GATC 8 cut(s) 101, 493, 511, 835, 1191, 1363, 1372, 1483
BstMAI GTCTC 2 cut(s) 23, 592
BstMBI GATC 8 cut(s) 98, 490, 508, 832, 1188, 1360, 1369, 1480
BstMCI CGRYCG 1 cut(s) 384
BstMWI GCNNNNNNNGC 5 cut(s) 296, 485, 950, 1608, 1676
BstNSI RCATGY 2 cut(s) 1050, 1702
BstSCI CCNGG 1 cut(s) 1129
BstSFI CTRYAG 1 cut(s) 166
BstV1I GCAGC 5 cut(s) 452, 748, 1135, 1328, 1679
BstX2I RGATCY 1 cut(s) 508
BstYI RGATCY 1 cut(s) 508
BstZI CGGCCG 1 cut(s) 381
BsuRI GGCC 4 cut(s) 84, 383, 1602, 1694
BtgI CCRYGG 2 cut(s) 817, 1110
BtgZI GCGATG 1 cut(s) 976
BtsCI GGATG 2 cut(s) 125, 1290
BtsIMutI CAGTG 4 cut(s) 175, 665, 688, 1681
Cac8I GCNNGC 4 cut(s) 571, 575, 951, 1052
CfoI GCGC 2 cut(s) 68, 268
Cfr10I RCCGGY 1 cut(s) 699
Cfr13I GGNCC 3 cut(s) 91, 255, 658
Csp6I GTAC 5 cut(s) 553, 987, 1420, 1487, 1737
CspAI ACCGGT 1 cut(s) 699
CviAII CATG 4 cut(s) 818, 1047, 1111, 1699
CviQI GTAC 5 cut(s) 553, 987, 1420, 1487, 1737
DdeI CTNAG 8 cut(s) 399, 617, 996, 1022, 1416, 1526, 1553, 1673
DinI GGCGCC 1 cut(s) 67
DpnI GATC 8 cut(s) 100, 492, 510, 834, 1190, 1362, 1371, 1482
DpnII GATC 8 cut(s) 98, 490, 508, 832, 1188, 1360, 1369, 1480
DraIII CACNNNGTG 1 cut(s) 1676
EaeI YGGCCR 1 cut(s) 381
EagI CGGCCG 1 cut(s) 381
Eam1104I CTCTTC 1 cut(s) 801
EarI CTCTTC 1 cut(s) 801
EciI GGCGGA 3 cut(s) 251, 314, 471
EclXI CGGCCG 1 cut(s) 381
Eco130I CCWWGG 2 cut(s) 817, 1110
Eco31I GGTCTC 1 cut(s) 23
Eco47I GGWCC 3 cut(s) 91, 255, 658
Eco52I CGGCCG 1 cut(s) 381
Eco57I CTGAAG 3 cut(s) 774, 825, 1142
EcoRI GAATTC 1 cut(s) 639
EcoT14I CCWWGG 2 cut(s) 817, 1110
EgeI GGCGCC 1 cut(s) 67
EheI GGCGCC 1 cut(s) 67
ErhI CCWWGG 2 cut(s) 817, 1110
FaeI CATG 4 cut(s) 821, 1050, 1114, 1702
FaqI GGGAC 3 cut(s) 219, 228, 372
FatI CATG 4 cut(s) 817, 1046, 1110, 1698
FauNDI CATATG 2 cut(s) 251, 1057
FbaI TGATCA 3 cut(s) 832, 1188, 1480
FblI GTMKAC 4 cut(s) 60, 221, 600, 1462
Fnu4HI GCNGC 6 cut(s) 234, 441, 762, 1149, 1317, 1668
FokI GGATG 2 cut(s) 112, 1297
Fsp4HI GCNGC 6 cut(s) 234, 441, 762, 1149, 1317, 1668
FspBI CTAG 6 cut(s) 47, 437, 783, 1608, 1664, 1734
GlaI GCGC 2 cut(s) 67, 267
GluI GCNGC 6 cut(s) 234, 441, 762, 1149, 1317, 1668
GsaI CCCAGC 1 cut(s) 625
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 4 cut(s) 84, 383, 1602, 1694
HapII CCGG 5 cut(s) 26, 108, 258, 700, 1131
HhaI GCGC 2 cut(s) 68, 268
Hin1I GRCGYC 2 cut(s) 54, 66
Hin1II CATG 4 cut(s) 821, 1050, 1114, 1702
Hin6I GCGC 2 cut(s) 66, 266
HinP1I GCGC 2 cut(s) 66, 266
HincII GTYRAC 2 cut(s) 222, 372
HindII GTYRAC 2 cut(s) 222, 372
HindIII AAGCTT 1 cut(s) 1546
HinfI GANTC 5 cut(s) 184, 302, 360, 812, 1272
HpaII CCGG 5 cut(s) 26, 108, 258, 700, 1131
HphI GGTGA 4 cut(s) 238, 1084, 1228, 1441
Hpy188I TCNGA 7 cut(s) 189, 201, 693, 805, 1277, 1554, 1621
Hpy188III TCNNGA 5 cut(s) 14, 26, 258, 512, 1643
Hpy99I CGWCG 4 cut(s) 56, 59, 226, 780
HpyAV CCTTC 3 cut(s) 139, 798, 973
HpyCH4III ACNGT 8 cut(s) 170, 210, 219, 226, 376, 586, 776, 1077
HpyCH4IV ACGT 2 cut(s) 54, 194
HpyCH4V TGCA 9 cut(s) 522, 569, 665, 764, 1073, 1316, 1637, 1679, 1709
HpyF10VI GCNNNNNNNGC 5 cut(s) 296, 485, 950, 1608, 1676
HpyF3I CTNAG 8 cut(s) 399, 617, 996, 1022, 1416, 1526, 1553, 1673
HpySE526I ACGT 2 cut(s) 54, 194
Hsp92I GRCGYC 2 cut(s) 54, 66
Hsp92II CATG 4 cut(s) 821, 1050, 1114, 1702
HspAI GCGC 2 cut(s) 66, 266
KasI GGCGCC 1 cut(s) 65
Kpn2I TCCGGA 2 cut(s) 25, 257
KpnI GGTACC 1 cut(s) 1490
Ksp22I TGATCA 3 cut(s) 832, 1188, 1480
Kzo9I GATC 8 cut(s) 98, 490, 508, 832, 1188, 1360, 1369, 1480
LmnI GCTCC 3 cut(s) 287, 892, 1344
Lsp1109I GCAGC 5 cut(s) 452, 748, 1135, 1328, 1679
LweI GCATC 2 cut(s) 134, 717
MaeI CTAG 6 cut(s) 47, 437, 783, 1608, 1664, 1734
MaeII ACGT 2 cut(s) 54, 194
MaeIII GTNAC 2 cut(s) 226, 1659
MalI GATC 8 cut(s) 100, 492, 510, 834, 1190, 1362, 1371, 1482
MboI GATC 8 cut(s) 98, 490, 508, 832, 1188, 1360, 1369, 1480
MboII GAAGA 9 cut(s) 29, 380, 412, 415, 532, 818, 935, 1081, 1465
MfeI CAATTG 1 cut(s) 544
MflI RGATCY 1 cut(s) 508
MluCI AATT 6 cut(s) 544, 639, 741, 848, 1386, 1496
Mly113I GGCGCC 1 cut(s) 66
MlyI GAGTC 1 cut(s) 354
MmeI TCCRAC 1 cut(s) 1644
MroI TCCGGA 2 cut(s) 25, 257
MseI TTAA 3 cut(s) 767, 1499, 1629
MslI CAYNNNNRTG 4 cut(s) 1184, 1259, 1304, 1753
MspA1I CMGCKG 1 cut(s) 1148
MspI CCGG 5 cut(s) 26, 108, 258, 700, 1131
MspR9I CCNGG 1 cut(s) 1131
MunI CAATTG 1 cut(s) 544
Mva1269I GAATGC 1 cut(s) 290
MwoI GCNNNNNNNGC 5 cut(s) 296, 485, 950, 1608, 1676
NarI GGCGCC 1 cut(s) 66
NciI CCSGG 1 cut(s) 1131
NcoI CCATGG 2 cut(s) 817, 1110
NdeI CATATG 2 cut(s) 251, 1057
NdeII GATC 8 cut(s) 98, 490, 508, 832, 1188, 1360, 1369, 1480
NlaIII CATG 4 cut(s) 821, 1050, 1114, 1702
NlaIV GGNNCC 7 cut(s) 67, 773, 888, 1105, 1340, 1413, 1488
NmeAIII GCCGAG 1 cut(s) 342
NmuCI GTSAC 1 cut(s) 226
NspI RCATGY 2 cut(s) 1050, 1702
PciI ACATGT 1 cut(s) 1698
PctI GAATGC 1 cut(s) 290
PfeI GAWTC 4 cut(s) 184, 302, 812, 1272
PflFI GACNNNGTC 2 cut(s) 53, 376
PinAI ACCGGT 1 cut(s) 699
PkrI GCNGC 6 cut(s) 235, 442, 763, 1150, 1318, 1669
PleI GAGTC 1 cut(s) 354
PluTI GGCGCC 1 cut(s) 69
PpsI GAGTC 1 cut(s) 354
PscI ACATGT 1 cut(s) 1698
PsiI TTATAA 1 cut(s) 1725
Psp1406I AACGTT 1 cut(s) 194
PspFI CCCAGC 1 cut(s) 621
PspN4I GGNNCC 7 cut(s) 67, 773, 888, 1105, 1340, 1413, 1488
PspPI GGNCC 3 cut(s) 91, 255, 658
PsuI RGATCY 1 cut(s) 508
PsyI GACNNNGTC 2 cut(s) 53, 376
PvuII CAGCTG 1 cut(s) 1148
RsaI GTAC 5 cut(s) 554, 988, 1421, 1488, 1738
RsaNI GTAC 5 cut(s) 553, 987, 1420, 1487, 1737
RseI CAYNNNNRTG 4 cut(s) 1184, 1259, 1304, 1753
SalI GTCGAC 1 cut(s) 220
SaqAI TTAA 3 cut(s) 767, 1499, 1629
SatI GCNGC 6 cut(s) 234, 441, 762, 1149, 1317, 1668
Sau3AI GATC 8 cut(s) 98, 490, 508, 832, 1188, 1360, 1369, 1480
Sau96I GGNCC 3 cut(s) 91, 255, 658
ScaI AGTACT 1 cut(s) 1421
SchI GAGTC 1 cut(s) 354
ScrFI CCNGG 1 cut(s) 1131
SfaNI GCATC 2 cut(s) 134, 717
SfcI CTRYAG 1 cut(s) 166
SfoI GGCGCC 1 cut(s) 67
SinI GGWCC 3 cut(s) 91, 255, 658
SmiMI CAYNNNNRTG 4 cut(s) 1184, 1259, 1304, 1753
Sse9I AATT 6 cut(s) 544, 639, 741, 848, 1386, 1496
SsiI CCGC 8 cut(s) 111, 123, 152, 233, 236, 299, 456, 1207
SspDI GGCGCC 1 cut(s) 65
SspI AATATT 1 cut(s) 594
SspMI CTAG 6 cut(s) 47, 437, 783, 1608, 1664, 1734
StyD4I CCNGG 1 cut(s) 1129
StyI CCWWGG 2 cut(s) 817, 1110
TaaI ACNGT 8 cut(s) 170, 210, 219, 226, 376, 586, 776, 1077
TaiI ACGT 2 cut(s) 57, 197
TaqI TCGA 5 cut(s) 15, 144, 182, 221, 778
TasI AATT 6 cut(s) 544, 639, 741, 848, 1386, 1496
TatI WGTACW 2 cut(s) 1419, 1736
TauI GCSGC 1 cut(s) 236
TfiI GAWTC 4 cut(s) 184, 302, 812, 1272
Tru1I TTAA 3 cut(s) 767, 1499, 1629
Tru9I TTAA 3 cut(s) 767, 1499, 1629
TscAI CASTG 4 cut(s) 175, 672, 688, 1681
TseFI GTSAC 1 cut(s) 226
TseI GCWGC 5 cut(s) 440, 761, 1148, 1316, 1667
Tsp45I GTSAC 1 cut(s) 226
TspDTI ATGAA 3 cut(s) 121, 1346, 1509
TspRI CASTG 4 cut(s) 175, 672, 688, 1681
Tth111I GACNNNGTC 2 cut(s) 53, 376
VpaK11BI GGWCC 3 cut(s) 91, 255, 658
XapI RAATTY 1 cut(s) 639
XceI RCATGY 2 cut(s) 1050, 1702
XcmI CCANNNNNNNNNTGG 1 cut(s) 1398
XmiI GTMKAC 4 cut(s) 60, 221, 600, 1462
XspI CTAG 6 cut(s) 47, 437, 783, 1608, 1664, 1734
ZraI GACGTC 1 cut(s) 55
ZrmI AGTACT 1 cut(s) 1421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.