RchiOBHm_Chr7g0227651

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000191
Physical Location & Seq
Reverse (-)
50876675 .. 50879529
2855 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20391

Sequence Viewer

Length: 1647 bp
ATGGCCACTTTTCCGGAGAGCCAAACTCCACTGCTCGACGACGTTGTGGAGGGCGCCGTTGACTGCAACGGCCATCCGGTCCGCAGATCAAGTTCAGGCGGTTGGCCTTCCGCATCGGGTGGAGGTTGCGGAGAGGCTTGCGTACTATGGAATCAGCTCCAACCTTATTTGTTTCTGACCGGGCCTCTCGGACAGTCGACTGCCACGGCGGCTGAGAACGTCAACATATGGTCCGGAACAGCGTTCTTGTTTCCTCTATTGGGAGCGTTCGTGGCAGATTCTTTTCTCGGTCGTTACCGCACCATCATTGCCGCTTCTGTCCTCTACGTCATGGGTCTTGCCTTGCTGACTGTGTCAGCCGTGCTTCCGTCTTCTCAGCTTCAAGTATTATTGTTCTTTTTCTCTCTATATTTAGTAGCAGTTGCGCAAGGTGGACACAAGCCCTGTGTTCAGGCTTTCGGAGCAGATCAGTTCGATAGACACGATCCAGAGGAGAGCAAAGCGAAAAGCTCATTTTTCAATTGGTGGTATCTTAGTATGTGTGTAGGCCCCATGATTACCTTTCCAGTATTAGCCTACATACAGGACAACCTGAGTTGGGGTCTGGGTTTTGGTCTTCCTTGCATTGTGATGGTCCTTGCACTGCTTATCTTCCTTCTTGGAACAAGAACGTATCGGTATAGTATCAAAGGGGATGAGGACAGCCCATTTGTGAGAATTGGCAAGGTGTTTGCTGTTGCATTAAGGAATTGGCGAACTACTCCTTCAGCAATAGCTTCAGAAGAGGAATCTCGTGGAACCCTGTCTCACCAAAGTTCTCAACAATTCAAATTGCTCAACAAAGCCTTGCTTGCACCGGATGATTTGAAGGAAAATGGGAAAGTGTGTACCATCGCTGAGGTTGAAGAAGCAAAGGCCGTTCTTAGGCTGTTTCCTATATGGGTTACATGCTTGCCATATGCCATTGTGTTTGCACAGTGCTCGACTTTTTTCACTAAGCAAGGTGCCACCATGGACAGAACAATTGTGCCAGGTTTTGATATACCAGCTGCTTCACTTCAGTCGTTTATCGGCATTGCCACTATTATATTCATTCCCATTTATGATCGCATATTTGTTCCAATAGCAAGAGCTTTCACTAGAGAACCCTCTGGCATTACAATGCTACGAAGAATCGGAACTGGGATGTTTATATCTATTATTTCCATGGTAGTTGCAGCTTTAGTTGAGATGCAAAGGGTCCAAACTGCTAAAGACTATAATCTGTTTGATAAGCCAAGTGCCACAGTTCCAATGAGTGTTTGGTGGTTAGGTCCTCAGTACTTGTTAATTGGACTGGCCGATGTTTTCACTATGGTTGGTCTGCAAGAGTTCTTCTACGATCAGGTACCAAATGAATTAAGAAGCGTAGGACTTGCCCTCTACCTCAGTATATTTGGTGTGGGAAGCTTTCTGAGCAGCTTTCTTATCTCTGTTATTGAGGGAGCAACCAGTTGGGCAGGTCACACTAGCTGGTTTTCCAATAACCTCAATCGTGCACATCTTGATTACTTCTATTGGTTACTTGCAGCAGTCAATGCAGTAGGATTGGTGGTTTACATGTATTTCGCAAAATCGTACATATATAATAGGGGTAGTACAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

548

Amino Acids

60.29

Weight (kDa)

6.11

Isoelectric Point (pI)

40.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 59 - 486 1.7e-16 Major Facilitator Superfamily
PTR2 PF00854 99 - 505 1.3e-97 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 426
Acc36I ACCTGC 1 cut(s) 1490
Acc65I GGTACC 1 cut(s) 1387
AccB1I GGYRCC 3 cut(s) 53, 1004, 1387
AccI GTMKAC 1 cut(s) 197
AccIII TCCGGA 2 cut(s) 13, 233
AciI CCGC 7 cut(s) 82, 99, 111, 129, 209, 298, 312
AclWI GGATC 1 cut(s) 479
AcoI YGGCCR 3 cut(s) 3, 70, 1338
AcuI CTGAAG 3 cut(s) 750, 762, 1043
AcyI GRCGYC 1 cut(s) 54
AfaI GTAC 6 cut(s) 144, 889, 1322, 1389, 1619, 1639
AfiI CCNNNNNNNGG 3 cut(s) 260, 598, 924
AflIII ACRYGT 1 cut(s) 1599
AgsI TTSAA 5 cut(s) 383, 520, 829, 868, 905
AjnI CCWGG 1 cut(s) 1030
Alw21I GWGCWC 2 cut(s) 983, 1540
Alw26I GTCTC 1 cut(s) 810
Alw44I GTGCAC 1 cut(s) 1536
AlwI GGATC 1 cut(s) 479
Aor13HI TCCGGA 2 cut(s) 13, 233
AoxI GGCC 7 cut(s) 3, 70, 104, 182, 547, 915, 1338
ApaLI GTGCAC 1 cut(s) 1536
ApeKI GCWGC 4 cut(s) 1049, 1217, 1458, 1568
ArsI GACNNNNNNTTYG 2 cut(s) 692, 724
Asp718I GGTACC 1 cut(s) 1387
AspLEI GCGC 2 cut(s) 56, 427
AspS9I GGNCC 7 cut(s) 79, 182, 231, 548, 634, 1240, 1313
AsuC2I CCSGG 1 cut(s) 181
AsuHPI GGTGA 1 cut(s) 800
AvaII GGWCC 5 cut(s) 79, 231, 634, 1240, 1313
BaeGI GKGCMC 1 cut(s) 1540
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 3 cut(s) 53, 1004, 1387
BauI CACGAG 1 cut(s) 792
BbsI GAAGAC 2 cut(s) 363, 608
Bbv12I GWGCWC 2 cut(s) 983, 1540
BbvCI CCTCAGC 1 cut(s) 897
BbvI GCAGC 4 cut(s) 1036, 1229, 1470, 1580
BccI CCATC 4 cut(s) 81, 311, 625, 899
BceAI ACGGC 5 cut(s) 41, 85, 222, 344, 902
BcgI CGANNNNNNTGC 2 cut(s) 963, 997
BciT130I CCWGG 1 cut(s) 1032
BcnI CCSGG 1 cut(s) 181
BcoDI GTCTC 1 cut(s) 810
BfaI CTAG 2 cut(s) 1140, 1509
BfoI RGCGCY 1 cut(s) 57
BfuAI ACCTGC 1 cut(s) 1490
BglI GCCNNNNNGGC 1 cut(s) 209
BisI GCNGC 6 cut(s) 210, 312, 1050, 1218, 1459, 1569
BlsI GCNGC 6 cut(s) 211, 313, 1051, 1219, 1460, 1570
BmcAI AGTACT 1 cut(s) 1322
Bme1390I CCNGG 2 cut(s) 181, 1032
Bme18I GGWCC 5 cut(s) 79, 231, 634, 1240, 1313
BmgT120I GGNCC 7 cut(s) 79, 182, 231, 548, 634, 1240, 1313
BmiI GGNNCC 6 cut(s) 55, 550, 799, 1006, 1241, 1389
BmrFI CCNGG 2 cut(s) 181, 1032
BmrI ACTGGG 1 cut(s) 1191
BmsI GCATC 2 cut(s) 122, 1221
BmuI ACTGGG 1 cut(s) 1191
BpiI GAAGAC 2 cut(s) 363, 608
BplI GAGNNNNNCTC 2 cut(s) 10, 42
Bpu10I CCTNAGC 1 cut(s) 897
BpuMI CCSGG 1 cut(s) 181
BsaHI GRCGYC 1 cut(s) 54
BsaJI CCNNGG 3 cut(s) 204, 1011, 1206
BsaWI WCCGGW 4 cut(s) 13, 76, 233, 856
BsaXI ACNNNNNCTCC 2 cut(s) 255, 285
Bsc4I CCNNNNNNNGG 3 cut(s) 260, 598, 924
Bse1I ACTGG 4 cut(s) 566, 1186, 1341, 1491
Bse3DI GCAATG 2 cut(s) 306, 1074
BseAI TCCGGA 2 cut(s) 13, 233
BseBI CCWGG 1 cut(s) 1032
BseDI CCNNGG 3 cut(s) 204, 1011, 1206
BseGI GGATG 4 cut(s) 73, 700, 865, 1191
BseLI CCNNNNNNNGG 3 cut(s) 260, 598, 924
BseMI GCAATG 2 cut(s) 306, 1074
BseMII CTCAG 7 cut(s) 204, 389, 584, 888, 1331, 1441, 1445
BseNI ACTGG 4 cut(s) 566, 1186, 1341, 1491
BseRI GAGGAG 1 cut(s) 506
BseSI GKGCMC 1 cut(s) 1540
BseXI GCAGC 4 cut(s) 1036, 1229, 1470, 1580
Bsh1285I CGRYCG 1 cut(s) 292
BshFI GGCC 7 cut(s) 5, 72, 106, 184, 549, 917, 1340
BshNI GGYRCC 3 cut(s) 53, 1004, 1387
BsiEI CGRYCG 1 cut(s) 292
BsiHKAI GWGCWC 2 cut(s) 983, 1540
BsiSI CCGG 5 cut(s) 14, 77, 180, 234, 857
BslI CCNNNNNNNGG 3 cut(s) 260, 598, 924
BsmAI GTCTC 1 cut(s) 810
BsnI GGCC 7 cut(s) 5, 72, 106, 184, 549, 917, 1340
Bsp1286I GDGCHC 2 cut(s) 983, 1540
Bsp13I TCCGGA 2 cut(s) 13, 233
Bsp143I GATC 5 cut(s) 86, 466, 484, 1105, 1381
Bsp19I CCATGG 2 cut(s) 1011, 1206
BspACI CCGC 7 cut(s) 82, 99, 111, 129, 209, 298, 312
BspANI GGCC 7 cut(s) 5, 72, 106, 184, 549, 917, 1340
BspCNI CTCAG 7 cut(s) 205, 388, 585, 889, 1330, 1440, 1446
BspEI TCCGGA 2 cut(s) 13, 233
BspLI GGNNCC 6 cut(s) 55, 550, 799, 1006, 1241, 1389
BspMI ACCTGC 1 cut(s) 1490
BspPI GGATC 1 cut(s) 479
BspT107I GGYRCC 3 cut(s) 53, 1004, 1387
BsrDI GCAATG 2 cut(s) 306, 1074
BsrI ACTGG 4 cut(s) 566, 1186, 1341, 1491
BssECI CCNNGG 3 cut(s) 204, 1011, 1206
BssMI GATC 5 cut(s) 86, 466, 484, 1105, 1381
BssNI GRCGYC 1 cut(s) 54
BssSI CACGAG 1 cut(s) 792
BssT1I CCWWGG 2 cut(s) 1011, 1206
Bst2BI CACGAG 1 cut(s) 792
Bst2UI CCWGG 1 cut(s) 1032
Bst4CI ACNGT 4 cut(s) 195, 352, 978, 1288
Bst6I CTCTTC 1 cut(s) 777
BstACI GRCGYC 1 cut(s) 54
BstAPI GCANNNNNTGC 1 cut(s) 1577
BstC8I GCNNGC 3 cut(s) 139, 852, 953
BstDSI CCRYGG 3 cut(s) 204, 1011, 1206
BstF5I GGATG 4 cut(s) 73, 700, 865, 1191
BstH2I RGCGCY 1 cut(s) 57
BstHHI GCGC 2 cut(s) 56, 427
BstKTI GATC 5 cut(s) 89, 469, 487, 1108, 1384
BstMAI GTCTC 1 cut(s) 810
BstMBI GATC 5 cut(s) 86, 466, 484, 1105, 1381
BstMCI CGRYCG 1 cut(s) 292
BstMWI GCNNNNNNNGC 6 cut(s) 209, 272, 461, 851, 1455, 1577
BstNI CCWGG 1 cut(s) 1032
BstNSI RCATGY 2 cut(s) 951, 1603
BstSCI CCNGG 2 cut(s) 179, 1030
BstSLI GKGCMC 1 cut(s) 1540
BstV1I GCAGC 4 cut(s) 1036, 1229, 1470, 1580
BstV2I GAAGAC 2 cut(s) 363, 608
BsuRI GGCC 7 cut(s) 5, 72, 106, 184, 549, 917, 1340
BtgI CCRYGG 3 cut(s) 204, 1011, 1206
BtgZI GCGATG 1 cut(s) 877
BtsCI GGATG 4 cut(s) 73, 700, 865, 1191
BtsI GCAGTG 2 cut(s) 29, 641
BtsIMutI CAGTG 3 cut(s) 29, 641, 983
BveI ACCTGC 1 cut(s) 1490
Cac8I GCNNGC 3 cut(s) 139, 852, 953
CfoI GCGC 2 cut(s) 56, 427
Cfr13I GGNCC 7 cut(s) 79, 182, 231, 548, 634, 1240, 1313
CpoI CGGWCCG 1 cut(s) 79
Csp6I GTAC 6 cut(s) 143, 888, 1321, 1388, 1618, 1638
CspI CGGWCCG 1 cut(s) 79
CviAII CATG 6 cut(s) 331, 553, 948, 1012, 1207, 1600
CviQI GTAC 6 cut(s) 143, 888, 1321, 1388, 1618, 1638
DinI GGCGCC 1 cut(s) 55
DpnI GATC 5 cut(s) 88, 468, 486, 1107, 1383
DpnII GATC 5 cut(s) 86, 466, 484, 1105, 1381
EaeI YGGCCR 3 cut(s) 3, 70, 1338
Eam1104I CTCTTC 1 cut(s) 777
EarI CTCTTC 1 cut(s) 777
Eco130I CCWWGG 2 cut(s) 1011, 1206
Eco47I GGWCC 5 cut(s) 79, 231, 634, 1240, 1313
Eco57I CTGAAG 3 cut(s) 750, 762, 1043
EcoO109I RGGNCCY 2 cut(s) 548, 1313
EcoRII CCWGG 1 cut(s) 1030
EcoT14I CCWWGG 2 cut(s) 1011, 1206
EgeI GGCGCC 1 cut(s) 55
EheI GGCGCC 1 cut(s) 55
ErhI CCWWGG 2 cut(s) 1011, 1206
FaeI CATG 6 cut(s) 334, 556, 951, 1015, 1210, 1603
FalI AAGNNNNNCTT 2 cut(s) 834, 866
FatI CATG 6 cut(s) 330, 552, 947, 1011, 1206, 1599
FauNDI CATATG 2 cut(s) 227, 958
FblI GTMKAC 1 cut(s) 197
Fnu4HI GCNGC 6 cut(s) 210, 312, 1050, 1218, 1459, 1569
FokI GGATG 4 cut(s) 60, 707, 872, 1198
Fsp4HI GCNGC 6 cut(s) 210, 312, 1050, 1218, 1459, 1569
FspBI CTAG 2 cut(s) 1140, 1509
FspI TGCGCA 1 cut(s) 426
GlaI GCGC 2 cut(s) 55, 426
GluI GCNGC 6 cut(s) 210, 312, 1050, 1218, 1459, 1569
HaeII RGCGCY 1 cut(s) 57
HaeIII GGCC 7 cut(s) 5, 72, 106, 184, 549, 917, 1340
HapII CCGG 5 cut(s) 14, 77, 180, 234, 857
HhaI GCGC 2 cut(s) 56, 427
Hin1I GRCGYC 1 cut(s) 54
Hin1II CATG 6 cut(s) 334, 556, 951, 1015, 1210, 1603
Hin6I GCGC 2 cut(s) 54, 425
HinP1I GCGC 2 cut(s) 54, 425
HincII GTYRAC 3 cut(s) 61, 198, 223
HindII GTYRAC 3 cut(s) 61, 198, 223
HindIII AAGCTT 1 cut(s) 1447
HinfI GANTC 4 cut(s) 151, 278, 788, 1173
HpaII CCGG 5 cut(s) 14, 77, 180, 234, 857
HphI GGTGA 1 cut(s) 800
Hpy166II GTNNAC 7 cut(s) 61, 198, 223, 434, 888, 1538, 1597
Hpy188I TCNGA 6 cut(s) 177, 191, 461, 781, 1178, 1455
Hpy188III TCNNGA 4 cut(s) 14, 234, 488, 1544
Hpy8I GTNNAC 7 cut(s) 61, 198, 223, 434, 888, 1538, 1597
Hpy99I CGWCG 2 cut(s) 41, 44
HpyAV CCTTC 4 cut(s) 117, 665, 774, 862
HpyCH4III ACNGT 4 cut(s) 195, 352, 978, 1288
HpyCH4IV ACGT 4 cut(s) 42, 219, 327, 671
HpyF10VI GCNNNNNNNGC 6 cut(s) 209, 272, 461, 851, 1455, 1577
HpySE526I ACGT 4 cut(s) 42, 219, 327, 671
Hsp92I GRCGYC 1 cut(s) 54
Hsp92II CATG 6 cut(s) 334, 556, 951, 1015, 1210, 1603
HspAI GCGC 2 cut(s) 54, 425
KasI GGCGCC 1 cut(s) 53
Kpn2I TCCGGA 2 cut(s) 13, 233
KpnI GGTACC 1 cut(s) 1391
Kzo9I GATC 5 cut(s) 86, 466, 484, 1105, 1381
LmnI GCTCC 4 cut(s) 162, 263, 461, 1484
Lsp1109I GCAGC 4 cut(s) 1036, 1229, 1470, 1580
LweI GCATC 2 cut(s) 122, 1221
MaeI CTAG 2 cut(s) 1140, 1509
MaeII ACGT 4 cut(s) 42, 219, 327, 671
MaeIII GTNAC 4 cut(s) 293, 943, 1502, 1560
MalI GATC 5 cut(s) 88, 468, 486, 1107, 1383
MboI GATC 5 cut(s) 86, 466, 484, 1105, 1381
MboII GAAGA 7 cut(s) 363, 608, 643, 794, 917, 1182, 1366
MfeI CAATTG 2 cut(s) 520, 1023
MhlI GDGCHC 2 cut(s) 983, 1540
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 8 cut(s) 520, 717, 748, 824, 830, 1023, 1329, 1397
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 54
MmeI TCCRAC 1 cut(s) 184
Mox20I TGGCCA 1 cut(s) 5
MroI TCCGGA 2 cut(s) 13, 233
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 743, 1328, 1400
MslI CAYNNNNRTG 2 cut(s) 629, 1160
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 1049
MspI CCGG 5 cut(s) 14, 77, 180, 234, 857
MspR9I CCNGG 2 cut(s) 181, 1032
MunI CAATTG 2 cut(s) 520, 1023
MvaI CCWGG 1 cut(s) 1032
MwoI GCNNNNNNNGC 6 cut(s) 209, 272, 461, 851, 1455, 1577
NarI GGCGCC 1 cut(s) 54
NciI CCSGG 1 cut(s) 181
NcoI CCATGG 2 cut(s) 1011, 1206
NdeI CATATG 2 cut(s) 227, 958
NdeII GATC 5 cut(s) 86, 466, 484, 1105, 1381
NlaIII CATG 6 cut(s) 334, 556, 951, 1015, 1210, 1603
NlaIV GGNNCC 6 cut(s) 55, 550, 799, 1006, 1241, 1389
NmuCI GTSAC 1 cut(s) 1502
NsbI TGCGCA 1 cut(s) 426
NspI RCATGY 2 cut(s) 951, 1603
PciI ACATGT 1 cut(s) 1599
PcsI WCGNNNNNNNCGW 1 cut(s) 480
PfeI GAWTC 4 cut(s) 151, 278, 788, 1173
PflFI GACNNNGTC 1 cut(s) 352
PkrI GCNGC 6 cut(s) 211, 313, 1051, 1219, 1460, 1570
PluTI GGCGCC 1 cut(s) 57
PpuMI RGGWCCY 1 cut(s) 1313
PscI ACATGT 1 cut(s) 1599
Psp5II RGGWCCY 1 cut(s) 1313
Psp6I CCWGG 1 cut(s) 1030
PspGI CCWGG 1 cut(s) 1030
PspN4I GGNNCC 6 cut(s) 55, 550, 799, 1006, 1241, 1389
PspPI GGNCC 7 cut(s) 79, 182, 231, 548, 634, 1240, 1313
PspPPI RGGWCCY 1 cut(s) 1313
PsyI GACNNNGTC 1 cut(s) 352
PvuII CAGCTG 1 cut(s) 1049
RsaI GTAC 6 cut(s) 144, 889, 1322, 1389, 1619, 1639
RsaNI GTAC 6 cut(s) 143, 888, 1321, 1388, 1618, 1638
RseI CAYNNNNRTG 2 cut(s) 629, 1160
Rsr2I CGGWCCG 1 cut(s) 79
RsrII CGGWCCG 1 cut(s) 79
SalI GTCGAC 1 cut(s) 196
SaqAI TTAA 3 cut(s) 743, 1328, 1400
SatI GCNGC 6 cut(s) 210, 312, 1050, 1218, 1459, 1569
Sau3AI GATC 5 cut(s) 86, 466, 484, 1105, 1381
Sau96I GGNCC 7 cut(s) 79, 182, 231, 548, 634, 1240, 1313
ScaI AGTACT 1 cut(s) 1322
ScrFI CCNGG 2 cut(s) 181, 1032
SduI GDGCHC 2 cut(s) 983, 1540
SfaNI GCATC 2 cut(s) 122, 1221
SfoI GGCGCC 1 cut(s) 55
SinI GGWCC 5 cut(s) 79, 231, 634, 1240, 1313
SmiMI CAYNNNNRTG 2 cut(s) 629, 1160
Sse9I AATT 8 cut(s) 520, 717, 748, 824, 830, 1023, 1329, 1397
SsiI CCGC 7 cut(s) 82, 99, 111, 129, 209, 298, 312
SspDI GGCGCC 1 cut(s) 53
SspMI CTAG 2 cut(s) 1140, 1509
StyD4I CCNGG 2 cut(s) 179, 1030
StyI CCWWGG 2 cut(s) 1011, 1206
TaaI ACNGT 4 cut(s) 195, 352, 978, 1288
TaiI ACGT 4 cut(s) 45, 222, 330, 674
TaqI TCGA 4 cut(s) 36, 197, 474, 983
TaqII GACCGA 1 cut(s) 278
TasI AATT 8 cut(s) 520, 717, 748, 824, 830, 1023, 1329, 1397
TatI WGTACW 2 cut(s) 1320, 1637
TauI GCSGC 2 cut(s) 212, 314
TfiI GAWTC 4 cut(s) 151, 278, 788, 1173
Tru1I TTAA 3 cut(s) 743, 1328, 1400
Tru9I TTAA 3 cut(s) 743, 1328, 1400
TscAI CASTG 3 cut(s) 36, 648, 983
TseFI GTSAC 1 cut(s) 1502
TseI GCWGC 4 cut(s) 1049, 1217, 1458, 1568
Tsp45I GTSAC 1 cut(s) 1502
TspDTI ATGAA 2 cut(s) 1081, 1410
TspGWI ACGGA 1 cut(s) 357
TspRI CASTG 3 cut(s) 36, 648, 983
Tth111I GACNNNGTC 1 cut(s) 352
VneI GTGCAC 1 cut(s) 1536
VpaK11BI GGWCC 5 cut(s) 79, 231, 634, 1240, 1313
XceI RCATGY 2 cut(s) 951, 1603
XcmI CCANNNNNNNNNTGG 1 cut(s) 1299
XmiI GTMKAC 1 cut(s) 197
XspI CTAG 2 cut(s) 1140, 1509
ZrmI AGTACT 1 cut(s) 1322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.