Rw7G033050

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000191
Physical Location & Seq
Reverse (-)
48432448 .. 48436121
3674 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G033050.1

Sequence Viewer

Length: 1698 bp
ATGGCTCCTAACACCCCATTGCTAAATCACGACATTGAGGTTGCCGTTTCGGAATCCAAAGCCTCTTCCTCCCCAACCGCCGTCAGATCCTCCACCACCGGCGGCTGGCGGTCCGCCTCGTTTATAATAGGGGTAGGATTTGCGGAGAGGTTTGCGTTCTATGGAGTCAGCTCGAACCTCATAACGTTCCTGAGTGGGCCATTGGGGGAGTCGACGGCGACGGCGGCGGTGAACGTGAACACGTGGTCAGGAACGGCAGCTTTACTTCCTATGTTGGGAGCCATTGTCGCCGATTCATATCTCGGTCGCTACCGTACCATCCTGCTTTCTACTCTGCTCTACATCTTGGGGCTAGGCTTGTTGACATTTTCAGCCATGCTTCCTTCTCTCAGCGGTTCTGCATGCGAAAAGACCGATGAATTCACTTCCTGTTACTCTCAGCTCCAAGTAATGTTCTTCTACTTCTCTCTGTATCTGGTAGCAGTAGGGCAAGGTGGAAACAAACCTTGCATACAGGCTTTTGGAGCTGATCAGTTCAGTGGACAAGATCCAGTGGAGAGCAAAGCCAGGAGCTCATTCTTTAATTGGTGGTACTTCGGTATCTGCTCAGGCTCCTTATGTACGCGATTGATATCAAGCTACATACAGGACAACTTCAGTTGGGTTCTGGGATTCGGACTTCCTTGCATTATGATGATCCTTGGACTATTTGTTTTCTTACTTGCAACAAGAACTTATCGGTATAGCATCATAGGCAACGGACAAAGCCCATTTGGCAGAATCGTCAAGGTGTTTATTGCTGCATTTAAGAACTGGCGAGCTAGTACTACATCGGAACCTCATGGAAACATGCATCATCGAAGTTCTGAACAATTCAAATTCCTCAACAAGGCATTGCTAGCACCAGATAGTAACTTGAAGGAACATAGGAAGCAGTGTACTGTCTTCGAGGTAGAAGAAGCAAAGGTTGTTCTTGGTCTTGTTCCGATATGGAGTACATGCTTGGTATTTGCAATTGTTCTTGCCCAAATGCCAACTTTCTTCACCAAGCAAGGGAATACTCTAGACAGAACAATTAAAGGAGGCTTTGACATTCCAGCCGCTTCACTTCAGTCTTTTACCAGCCTCATCATTATTCTCTTCATTCCTTTGTACGACCGCATTTTTGTTCCTATTGCAAGTGCTTTAACTAGGAAACCCTCTGGCATCACAACGCTACAAAGAATTGGAACTGGGATATTTTTATCTGCTATTTCCATGATAGTTGCAGCTTTAGTTGAGAAGAAAAGGCTTGAAACTGCTCAGGAGTATGCTCTGGTTGATGTTCCACATGTTACAATTCCAATGGGCGTGTGGTGGTTGATTCCTCAGTACTTGTTGATTGGTGTGTCTGACGTTTTCACGATGGTTGGTCTGCAAGAGTTTTTCTACGATCAGGTACCAAATGAACTAAGAAGTGTAGGAGTTGCCCTCTACCTCAGTATCTTTGGTGTAGGAAACTTTATGAGCAGCTTTCTTATCTCTGCCATAGACGAAGCAACAGGCGGAGTAGGCCGAGCTAGCTGGTTTTCCAATAACTTGAATCGTGCACATCTTGATTACTTTTACTGGCTACTTGCTGGACTCAGTGTAGTGGAACTGGGTGTCTTCACATATTTTGCAAAATCTTACAGATATAAAAGTGGAGGTACAATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

565

Amino Acids

62.02

Weight (kDa)

8.64

Isoelectric Point (pI)

36.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 45 - 503 2.5e-16 Major Facilitator Superfamily
PTR2 PF00854 104 - 522 1.1e-95 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 125
Acc65I GGTACC 1 cut(s) 1438
AccB1I GGYRCC 1 cut(s) 1438
AccI GTMKAC 1 cut(s) 212
AccII CGCG 1 cut(s) 625
AclI AACGTT 1 cut(s) 185
AclWI GGATC 3 cut(s) 81, 542, 691
AcsI RAATTY 2 cut(s) 419, 878
AcuI CTGAAG 2 cut(s) 640, 1094
AcvI CACGTG 1 cut(s) 243
AfiI CCNNNNNNNGG 4 cut(s) 105, 275, 889, 1053
AflIII ACRYGT 2 cut(s) 240, 1330
AgsI TTSAA 4 cut(s) 877, 919, 1295, 1582
AjnI CCWGG 1 cut(s) 566
Alw21I GWGCWC 2 cut(s) 575, 1591
Alw44I GTGCAC 1 cut(s) 1587
AlwI GGATC 3 cut(s) 81, 542, 691
AoxI GGCC 2 cut(s) 197, 1552
ApaLI GTGCAC 1 cut(s) 1587
ApeKI GCWGC 4 cut(s) 257, 800, 1268, 1509
ApoI RAATTY 2 cut(s) 419, 878
ArsI GACNNNNNNTTYG 2 cut(s) 1148, 1180
Asp718I GGTACC 1 cut(s) 1438
AspS9I GGNCC 2 cut(s) 111, 197
AsuHPI GGTGA 2 cut(s) 241, 1036
AsuNHI GCTAGC 2 cut(s) 898, 1559
AvaII GGWCC 1 cut(s) 111
BaeGI GKGCMC 1 cut(s) 1591
BaeI ACNNNNGTAYC 6 cut(s) 583, 583, 616, 616, 1465, 1498
BanI GGYRCC 1 cut(s) 1438
BanII GRGCYC 1 cut(s) 575
BbrPI CACGTG 1 cut(s) 243
BbsI GAAGAC 2 cut(s) 937, 1639
Bbv12I GWGCWC 2 cut(s) 575, 1591
BbvI GCAGC 4 cut(s) 269, 787, 1280, 1521
BccI CCATC 2 cut(s) 326, 1399
BceAI ACGGC 5 cut(s) 29, 65, 231, 237, 270
BciT130I CCWGG 1 cut(s) 568
BclI TGATCA 1 cut(s) 529
BfaI CTAG 6 cut(s) 353, 822, 899, 1064, 1191, 1560
BglI GCCNNNNNGGC 1 cut(s) 774
BisI GCNGC 7 cut(s) 103, 225, 258, 801, 1101, 1269, 1510
BlsI GCNGC 7 cut(s) 104, 226, 259, 802, 1102, 1270, 1511
BmcAI AGTACT 2 cut(s) 826, 1373
Bme1390I CCNGG 1 cut(s) 568
Bme18I GGWCC 1 cut(s) 111
BmgT120I GGNCC 2 cut(s) 111, 197
BmiI GGNNCC 5 cut(s) 6, 280, 613, 837, 1440
BmrFI CCNGG 1 cut(s) 568
BmrI ACTGGG 2 cut(s) 1242, 1649
BmsI GCATC 3 cut(s) 756, 862, 1215
BmtI GCTAGC 2 cut(s) 902, 1563
BmuI ACTGGG 2 cut(s) 1242, 1649
BpiI GAAGAC 2 cut(s) 937, 1639
BplI GAGNNNNNCTC 2 cut(s) 1455, 1487
Bpu10I CCTNAGC 2 cut(s) 607, 1302
BsaAI YACGTR 1 cut(s) 243
BsaBI GATNNNNATC 2 cut(s) 297, 631
BsaJI CCNNGG 1 cut(s) 700
BsaXI ACNNNNNCTCC 2 cut(s) 270, 300
Bsc4I CCNNNNNNNGG 4 cut(s) 105, 275, 889, 1053
Bse118I RCCGGY 1 cut(s) 98
Bse1I ACTGG 5 cut(s) 551, 818, 1237, 1613, 1644
Bse3DI GCAATG 2 cut(s) 17, 893
Bse8I GATNNNNATC 2 cut(s) 297, 631
BseBI CCWGG 1 cut(s) 568
BseDI CCNNGG 1 cut(s) 700
BseGI GGATG 1 cut(s) 318
BseJI GATNNNNATC 2 cut(s) 297, 631
BseLI CCNNNNNNNGG 4 cut(s) 105, 275, 889, 1053
BseMI GCAATG 2 cut(s) 17, 893
BseMII CTCAG 8 cut(s) 182, 403, 452, 621, 1316, 1382, 1492, 1639
BseNI ACTGG 5 cut(s) 551, 818, 1237, 1613, 1644
BseSI GKGCMC 1 cut(s) 1591
BseXI GCAGC 4 cut(s) 269, 787, 1280, 1521
Bsh1236I CGCG 1 cut(s) 625
Bsh1285I CGRYCG 2 cut(s) 307, 1159
BshFI GGCC 2 cut(s) 199, 1554
BshNI GGYRCC 1 cut(s) 1438
BsiEI CGRYCG 2 cut(s) 307, 1159
BsiHKAI GWGCWC 2 cut(s) 575, 1591
BsiSI CCGG 1 cut(s) 99
BslI CCNNNNNNNGG 4 cut(s) 105, 275, 889, 1053
BsnI GGCC 2 cut(s) 199, 1554
Bsp1286I GDGCHC 2 cut(s) 575, 1591
Bsp143I GATC 5 cut(s) 86, 529, 547, 696, 1432
BspANI GGCC 2 cut(s) 199, 1554
BspCNI CTCAG 8 cut(s) 183, 402, 451, 620, 1315, 1381, 1491, 1638
BspFNI CGCG 1 cut(s) 625
BspLI GGNNCC 5 cut(s) 6, 280, 613, 837, 1440
BspOI GCTAGC 2 cut(s) 902, 1563
BspPI GGATC 3 cut(s) 81, 542, 691
BspT107I GGYRCC 1 cut(s) 1438
BsrDI GCAATG 2 cut(s) 17, 893
BsrFI RCCGGY 1 cut(s) 98
BsrI ACTGG 5 cut(s) 551, 818, 1237, 1613, 1644
BssAI RCCGGY 1 cut(s) 98
BssECI CCNNGG 1 cut(s) 700
BssMI GATC 5 cut(s) 86, 529, 547, 696, 1432
BssT1I CCWWGG 1 cut(s) 700
Bst2UI CCWGG 1 cut(s) 568
Bst4CI ACNGT 2 cut(s) 314, 943
Bst6I CTCTTC 2 cut(s) 70, 1145
BstBAI YACGTR 1 cut(s) 243
BstC8I GCNNGC 5 cut(s) 107, 403, 819, 900, 1561
BstDEI CTNAG 9 cut(s) 191, 389, 438, 607, 1302, 1368, 1451, 1478, 1625
BstENI CCTNNNNNAGG 1 cut(s) 887
BstF5I GGATG 1 cut(s) 318
BstFNI CGCG 1 cut(s) 625
BstKTI GATC 5 cut(s) 89, 532, 550, 699, 1435
BstMBI GATC 5 cut(s) 86, 529, 547, 696, 1432
BstMCI CGRYCG 2 cut(s) 307, 1159
BstMWI GCNNNNNNNGC 8 cut(s) 224, 287, 524, 753, 774, 899, 1551, 1560
BstNI CCWGG 1 cut(s) 568
BstNSI RCATGY 4 cut(s) 405, 853, 1002, 1334
BstSCI CCNGG 1 cut(s) 566
BstSLI GKGCMC 1 cut(s) 1591
BstUI CGCG 1 cut(s) 625
BstV1I GCAGC 4 cut(s) 269, 787, 1280, 1521
BstV2I GAAGAC 2 cut(s) 937, 1639
BstX2I RGATCY 2 cut(s) 86, 547
BstYI RGATCY 2 cut(s) 86, 547
BsuRI GGCC 2 cut(s) 199, 1554
BtsCI GGATG 1 cut(s) 318
BtsI GCAGTG 1 cut(s) 941
BtsIMutI CAGTG 4 cut(s) 544, 558, 941, 1633
Cac8I GCNNGC 5 cut(s) 107, 403, 819, 900, 1561
Cfr10I RCCGGY 1 cut(s) 98
Cfr13I GGNCC 2 cut(s) 111, 197
CpoI CGGWCCG 1 cut(s) 111
CspI CGGWCCG 1 cut(s) 111
CviAII CATG 7 cut(s) 376, 402, 842, 850, 999, 1258, 1331
DdeI CTNAG 9 cut(s) 191, 389, 438, 607, 1302, 1368, 1451, 1478, 1625
DpnI GATC 5 cut(s) 88, 531, 549, 698, 1434
DpnII GATC 5 cut(s) 86, 529, 547, 696, 1432
Eam1104I CTCTTC 2 cut(s) 70, 1145
EarI CTCTTC 2 cut(s) 70, 1145
EciI GGCGGA 2 cut(s) 103, 1560
Ecl136II GAGCTC 1 cut(s) 573
Eco130I CCWWGG 1 cut(s) 700
Eco24I GRGCYC 1 cut(s) 575
Eco32I GATATC 1 cut(s) 633
Eco47I GGWCC 1 cut(s) 111
Eco53kI GAGCTC 1 cut(s) 573
Eco57I CTGAAG 2 cut(s) 640, 1094
Eco72I CACGTG 1 cut(s) 243
EcoICRI GAGCTC 1 cut(s) 573
EcoNI CCTNNNNNAGG 1 cut(s) 887
EcoRI GAATTC 1 cut(s) 419
EcoRII CCWGG 1 cut(s) 566
EcoRV GATATC 1 cut(s) 633
EcoT14I CCWWGG 1 cut(s) 700
EcoT22I ATGCAT 1 cut(s) 855
EcoT38I GRGCYC 1 cut(s) 575
ErhI CCWWGG 1 cut(s) 700
FaeI CATG 7 cut(s) 379, 405, 845, 853, 1002, 1261, 1334
FatI CATG 7 cut(s) 375, 401, 841, 849, 998, 1257, 1330
FbaI TGATCA 1 cut(s) 529
FblI GTMKAC 1 cut(s) 212
Fnu4HI GCNGC 7 cut(s) 103, 225, 258, 801, 1101, 1269, 1510
FokI GGATG 1 cut(s) 305
FriOI GRGCYC 1 cut(s) 575
Fsp4HI GCNGC 7 cut(s) 103, 225, 258, 801, 1101, 1269, 1510
FspBI CTAG 6 cut(s) 353, 822, 899, 1064, 1191, 1560
GluI GCNGC 7 cut(s) 103, 225, 258, 801, 1101, 1269, 1510
HaeIII GGCC 2 cut(s) 199, 1554
HapII CCGG 1 cut(s) 99
Hin1II CATG 7 cut(s) 379, 405, 845, 853, 1002, 1261, 1334
HincII GTYRAC 2 cut(s) 213, 363
HindII GTYRAC 2 cut(s) 213, 363
HinfI GANTC 9 cut(s) 53, 165, 209, 293, 672, 780, 1363, 1582, 1623
HpaII CCGG 1 cut(s) 99
HphI GGTGA 2 cut(s) 241, 1036
Hpy166II GTNNAC 7 cut(s) 213, 232, 238, 363, 542, 939, 1589
Hpy188I TCNGA 7 cut(s) 52, 86, 677, 835, 868, 987, 1393
Hpy188III TCNNGA 7 cut(s) 29, 190, 249, 1064, 1304, 1402, 1595
Hpy8I GTNNAC 7 cut(s) 213, 232, 238, 363, 542, 939, 1589
Hpy99I CGWCG 2 cut(s) 217, 223
HpyAV CCTTC 2 cut(s) 393, 913
HpyCH4III ACNGT 2 cut(s) 314, 943
HpyCH4IV ACGT 4 cut(s) 185, 234, 242, 1395
HpyF10VI GCNNNNNNNGC 8 cut(s) 224, 287, 524, 753, 774, 899, 1551, 1560
HpyF3I CTNAG 9 cut(s) 191, 389, 438, 607, 1302, 1368, 1451, 1478, 1625
HpySE526I ACGT 4 cut(s) 185, 234, 242, 1395
Hsp92II CATG 7 cut(s) 379, 405, 845, 853, 1002, 1261, 1334
KpnI GGTACC 1 cut(s) 1442
Ksp22I TGATCA 1 cut(s) 529
Kzo9I GATC 5 cut(s) 86, 529, 547, 696, 1432
LmnI GCTCC 6 cut(s) 10, 278, 447, 524, 570, 617
Lsp1109I GCAGC 4 cut(s) 269, 787, 1280, 1521
LweI GCATC 3 cut(s) 756, 862, 1215
MaeI CTAG 6 cut(s) 353, 822, 899, 1064, 1191, 1560
MaeII ACGT 4 cut(s) 185, 234, 242, 1395
MaeIII GTNAC 3 cut(s) 431, 911, 1333
MalI GATC 5 cut(s) 88, 531, 549, 698, 1434
MboI GATC 5 cut(s) 86, 529, 547, 696, 1432
MboII GAAGA 8 cut(s) 57, 448, 937, 968, 1033, 1132, 1294, 1639
MfeI CAATTG 1 cut(s) 1014
MflI RGATCY 2 cut(s) 86, 547
MhlI GDGCHC 2 cut(s) 575, 1591
MluCI AATT 8 cut(s) 419, 583, 872, 878, 1014, 1074, 1224, 1338
MlyI GAGTC 3 cut(s) 174, 218, 1617
Mph1103I ATGCAT 1 cut(s) 855
MseI TTAA 4 cut(s) 582, 807, 1077, 1187
MslI CAYNNNNRTG 1 cut(s) 692
MspA1I CMGCKG 1 cut(s) 393
MspI CCGG 1 cut(s) 99
MspR9I CCNGG 1 cut(s) 568
MunI CAATTG 1 cut(s) 1014
MvaI CCWGG 1 cut(s) 568
MvnI CGCG 1 cut(s) 625
MwoI GCNNNNNNNGC 8 cut(s) 224, 287, 524, 753, 774, 899, 1551, 1560
NdeII GATC 5 cut(s) 86, 529, 547, 696, 1432
NheI GCTAGC 2 cut(s) 898, 1559
NlaIII CATG 7 cut(s) 379, 405, 845, 853, 1002, 1261, 1334
NlaIV GGNNCC 5 cut(s) 6, 280, 613, 837, 1440
NmeAIII GCCGAG 1 cut(s) 1580
NsiI ATGCAT 1 cut(s) 855
NspI RCATGY 4 cut(s) 405, 853, 1002, 1334
PaeI GCATGC 1 cut(s) 405
PciI ACATGT 1 cut(s) 1330
PfeI GAWTC 6 cut(s) 53, 293, 672, 780, 1363, 1582
PkrI GCNGC 7 cut(s) 104, 226, 259, 802, 1102, 1270, 1511
PleI GAGTC 3 cut(s) 173, 217, 1617
PmaCI CACGTG 1 cut(s) 243
PmlI CACGTG 1 cut(s) 243
PpsI GAGTC 3 cut(s) 173, 217, 1617
Ppu21I YACGTR 1 cut(s) 243
PscI ACATGT 1 cut(s) 1330
PsiI TTATAA 1 cut(s) 125
Psp124BI GAGCTC 1 cut(s) 575
Psp1406I AACGTT 1 cut(s) 185
Psp6I CCWGG 1 cut(s) 566
PspCI CACGTG 1 cut(s) 243
PspGI CCWGG 1 cut(s) 566
PspN4I GGNNCC 5 cut(s) 6, 280, 613, 837, 1440
PspPI GGNCC 2 cut(s) 111, 197
PsuI RGATCY 2 cut(s) 86, 547
RseI CAYNNNNRTG 1 cut(s) 692
Rsr2I CGGWCCG 1 cut(s) 111
RsrII CGGWCCG 1 cut(s) 111
SacI GAGCTC 1 cut(s) 575
SalI GTCGAC 1 cut(s) 211
SaqAI TTAA 4 cut(s) 582, 807, 1077, 1187
SatI GCNGC 7 cut(s) 103, 225, 258, 801, 1101, 1269, 1510
Sau3AI GATC 5 cut(s) 86, 529, 547, 696, 1432
Sau96I GGNCC 2 cut(s) 111, 197
ScaI AGTACT 2 cut(s) 826, 1373
SchI GAGTC 3 cut(s) 174, 218, 1617
ScrFI CCNGG 1 cut(s) 568
SduI GDGCHC 2 cut(s) 575, 1591
SfaNI GCATC 3 cut(s) 756, 862, 1215
SgrAI CRCCGGYG 1 cut(s) 98
SinI GGWCC 1 cut(s) 111
SmiMI CAYNNNNRTG 1 cut(s) 692
SphI GCATGC 1 cut(s) 405
Sse9I AATT 8 cut(s) 419, 583, 872, 878, 1014, 1074, 1224, 1338
SspMI CTAG 6 cut(s) 353, 822, 899, 1064, 1191, 1560
SstI GAGCTC 1 cut(s) 575
StyD4I CCNGG 1 cut(s) 566
StyI CCWWGG 1 cut(s) 700
TaaI ACNGT 2 cut(s) 314, 943
TaiI ACGT 4 cut(s) 188, 237, 245, 1398
TaqI TCGA 4 cut(s) 173, 212, 859, 948
TaqII GACCGA 2 cut(s) 293, 428
TasI AATT 8 cut(s) 419, 583, 872, 878, 1014, 1074, 1224, 1338
TatI WGTACW 4 cut(s) 824, 938, 995, 1371
TauI GCSGC 3 cut(s) 105, 227, 1103
TfiI GAWTC 6 cut(s) 53, 293, 672, 780, 1363, 1582
Tru1I TTAA 4 cut(s) 582, 807, 1077, 1187
Tru9I TTAA 4 cut(s) 582, 807, 1077, 1187
TscAI CASTG 4 cut(s) 544, 558, 941, 1633
TseI GCWGC 4 cut(s) 257, 800, 1268, 1509
TspDTI ATGAA 4 cut(s) 285, 432, 1132, 1461
TspGWI ACGGA 1 cut(s) 774
TspRI CASTG 4 cut(s) 544, 558, 941, 1633
VneI GTGCAC 1 cut(s) 1587
VpaK11BI GGWCC 1 cut(s) 111
XagI CCTNNNNNAGG 1 cut(s) 887
XapI RAATTY 2 cut(s) 419, 878
XbaI TCTAGA 1 cut(s) 1063
XceI RCATGY 4 cut(s) 405, 853, 1002, 1334
XcmI CCANNNNNNNNNTGG 1 cut(s) 1350
XmiI GTMKAC 1 cut(s) 212
XspI CTAG 6 cut(s) 353, 822, 899, 1064, 1191, 1560
ZrmI AGTACT 2 cut(s) 826, 1373
Zsp2I ATGCAT 1 cut(s) 855
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.