Rmu_sc0000347.1_g000023

Protein NRT1 PTR FAMILY 5.10-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000347.1
Physical Location & Seq
Forward (+)
67376 .. 76027
8652 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000347.1_g000023.1.cds

Sequence Viewer

Length: 3333 bp
atggctcctaacaccccattgctaaatcacgacattgaggttgccgtttcggaatccaaagcctcttcctccccaaccgccgtcagatcctccaccaccggcggctggcggtccgcctcgtttataataggggtaggatttgcggagaggtttgcgttctatggagtcagctcgaacctcataacgttcctgagtgggccattgggggagtcgacggcgacggcggcggtgaacgtgaacacgtggtcgggaacggcggctttacttcctatgttgggagccattgtcgccgattcatatctcggtcgctaccgtaccatcctgctttctactctgctctacatcttggggctaggcttgttgacattttcagccatgcttccttctctcagcggttctgcatgcgaaaagaccgatgaattcacttcctgttactctcagctccaagtaatgttcttctacttctctctgtatctggtagcagtagggcaaggtggaaacaaaccttgcatacaggcttttggagctgatcagttcagtggacaagatccagtggagagcaaagccaggagctcattctttaattggtggtacttcggtatctgctcaggctccttatgtacgcgattgatatcaagctacatacaggacaacttcagttgggttctgggattcggacttccttgcattatgatgatccttggactatttgttttcttacttgcaacaagaacttatcggtatagcatcataggcaacggacaaagcccatttggcagaatcgtcaaggtgtttattgctgcatttaagaactggcgagctagtactacatcggaacctcatggaaacatgcatcatcgaagttctgaacaattcaaattcctcaacaaggcattgctagcaccagatagtaacttgaaggaagataggaagcagtgtactgtcttcgaggtagaagaagcaaaggttgttcttggtcttgttccgatatggagtacatgcttggtatttgcaattgttcttgcccaaatgccaactttcttcaccaagcaagggaatactctagacagaacaattaaaggaggctttgacattccagccgcttcacttcagtcttttaccagcctcatcattattctcttcattcctttgtacgaccgcatttttgttcctattgcaagtgctttaactaggaaaccctctggcattacaacgctacaaagaattggaactgggatatttttatctgctatttccatgttagttgcagctttagttgagaagaaaaggcttgaaactgctcaagagtatgctctggttgatgttccacatgttacaattccaatgggcgtgtggtggttgattcctcagtacttgttgattggagtgtctgacgttttcacgatggttggtctgcaagagtttttctacgatcaggtaccaaatgaactaagaagtgtaggagttgccctctacctcagtatctttggtgtaggaaactttatgagcagctttcttatctcggccatagacgaagcaaccggcggagtaggccgagctagctggttttccaataacttgaatcgtgcacatcttgattacttttactggctacttgctggactcagtgtagtggaactggtaatggccatttctcagcgtgatgatcccctcgaccacaaaaccccattgctccaaaacgacgtcgaggcggccgttttggacttcagagactcctccttccctaaaagctcaggcggctggcggtccgccgcctttataatcggggtgggatgtgcggagaggttcgcattctatggcgtcagctccaacctcgtgacgtttctgagcgggccgttgggggagtcgacagctacggcggcggagaatgtgaacacatggtcaggaacggcgtcgttgcttcccttgctcggagccgtcgtcgccgattcgtttctcggtcgctaccgcaccatcgttatctcttctctgctctatatcctggggctaggcttgttgagtttctcggccaagcttccctctctcactggttctgattgcggaaacagcagtcagttgacatcatgctattctcaggtccaagtaatattcttctacttctctctatatctggtagctgtagggcaaggtggaaacaaaccttgcatacaagctttcggagctgatcagttcgatggacaagatccagtggagagcaaagccaaaagctcattctttaattggtggtactttggtatctgctcaggctccttgtgtacgcgattgatatcaagctacatacaggacaacttcagttgggttctgggatttggaattccttgtattgtgatggcccttggcctatttgttttcttgtccggaacaagaacttataggtacagcgttgaaggggatgggaaaagcccatatgccagaattgctaaggtttttgctgctgcatttaagaattggcgaactactccttcagagcctcttgcaaacctgcctcaccaaagttcagaaaaatacaggttcctcaacaaggcattgctacccgatagtgatttgaaggattataacagggtctgtactgtctctgaggtagaagaagcaaaggttgttcttagtctatttcctatatggagtacatgcctggtatatgctattgtgcttgcacagatgtcgactttctttaccaagcaaggggcgacactggacagagaaattgtagctggctttgagataccagctgcttcacttcagtcttttaccagcctcattattatcctcttcattcctgtttatgagcgtgtctttgttccgatggcaagtgctttcactggaaaaccctctggcattacaacgctacaaagaatcggagttgggatatttttagctgctctttccatgatagctgcagctgtagttgagatgaaaaggcttgaaactgctcaagagtatgctctggttgatctgccacatgttacaattccaatgggcgtgtggtggttgattcctcagtacttgttgattggagtgtctgatgttttctcgatggttggtctgcaagagtttttctacgatcaggtaccaaatgaactaagaagtgtaggagtcgccctctacctcagtatctttggtgtgggaaactttttaagcagctttcttatctcggccatagaggaagcaaccagcggagtaggccgagttagctggttttccaataatctgaatcgtgcgcatcttgattacttttactggctactcgctggactgagtgtagtggaactgggtgtcttcacatacttcgcaaaatcttaccgatataagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1110

Amino Acids

121.72

Weight (kDa)

6.42

Isoelectric Point (pI)

35.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 125, 1781, 2577
AatII GACGTC 1 cut(s) 1707
Acc16I TGCGCA 1 cut(s) 3240
Acc36I ACCTGC 1 cut(s) 2511
Acc65I GGTACC 2 cut(s) 1438, 3088
AccB1I GGYRCC 2 cut(s) 1438, 3088
AccBSI CCGCTC 1 cut(s) 1851
AccI GTMKAC 3 cut(s) 212, 1868, 2684
AccII CGCG 2 cut(s) 625, 2281
AccIII TCCGGA 1 cut(s) 2378
AclI AACGTT 1 cut(s) 185
AclWI GGATC 5 cut(s) 81, 542, 691, 1661, 2198
AcoI YGGCCR 5 cut(s) 1524, 1647, 1713, 2028, 3174
AcsI RAATTY 3 cut(s) 419, 878, 2334
AcuI CTGAAG 6 cut(s) 640, 1094, 1711, 2296, 2469, 2744
AcvI CACGTG 1 cut(s) 243
AcyI GRCGYC 3 cut(s) 1704, 1821, 1913
AfiI CCNNNNNNNGG 7 cut(s) 105, 275, 889, 1053, 1931, 2542, 2703
AflIII ACRYGT 3 cut(s) 240, 1330, 2980
AgsI TTSAA 7 cut(s) 877, 919, 1295, 1582, 2408, 2569, 2945
AjnI CCWGG 3 cut(s) 566, 2001, 2652
AjuI GAANNNNNNNTTGG 2 cut(s) 2216, 2248
Alw21I GWGCWC 2 cut(s) 575, 1591
Alw26I GTCTC 2 cut(s) 1725, 2599
Alw44I GTGCAC 1 cut(s) 1587
AlwI GGATC 5 cut(s) 81, 542, 691, 1661, 2198
AlwNI CAGNNNCTG 1 cut(s) 2586
Aor13HI TCCGGA 1 cut(s) 2378
ApaLI GTGCAC 1 cut(s) 1587
ApoI RAATTY 3 cut(s) 419, 878, 2334
ArsI GACNNNNNNTTYG 2 cut(s) 1148, 1180
Asp718I GGTACC 2 cut(s) 1438, 3088
AspLEI GCGC 1 cut(s) 3241
AspS9I GGNCC 6 cut(s) 111, 197, 1767, 1853, 2098, 2353
AsuHPI GGTGA 3 cut(s) 241, 1036, 2501
AsuNHI GCTAGC 2 cut(s) 898, 1559
AvaII GGWCC 3 cut(s) 111, 1767, 2098
BaeGI GKGCMC 1 cut(s) 1591
BalI TGGCCA 1 cut(s) 1649
BanI GGYRCC 2 cut(s) 1438, 3088
BanII GRGCYC 1 cut(s) 575
BauI CACGAG 1 cut(s) 1835
BbrPI CACGTG 1 cut(s) 243
BbsI GAAGAC 2 cut(s) 937, 3289
Bbv12I GWGCWC 2 cut(s) 575, 1591
BccI CCATC 8 cut(s) 326, 1399, 1982, 2189, 2344, 2408, 2818, 3049
BcgI CGANNNNNNTGC 2 cut(s) 2664, 2698
BciT130I CCWGG 3 cut(s) 568, 2003, 2654
BclI TGATCA 2 cut(s) 529, 2185
BcoDI GTCTC 2 cut(s) 1725, 2599
BfaI CTAG 7 cut(s) 353, 822, 899, 1064, 1191, 1560, 2009
BfmI CTRYAG 3 cut(s) 2139, 2916, 2922
BfuAI ACCTGC 1 cut(s) 2511
BglI GCCNNNNNGGC 1 cut(s) 774
BmcAI AGTACT 3 cut(s) 826, 1373, 3023
Bme1390I CCNGG 3 cut(s) 568, 2003, 2654
Bme18I GGWCC 3 cut(s) 111, 1767, 2098
BmgT120I GGNCC 6 cut(s) 111, 197, 1767, 1853, 2098, 2353
BmiI GGNNCC 9 cut(s) 6, 280, 613, 837, 1440, 1936, 2269, 2534, 3090
BmrFI CCNGG 3 cut(s) 568, 2003, 2654
BmrI ACTGGG 2 cut(s) 1242, 3299
BmsI GCATC 3 cut(s) 756, 862, 3250
BmtI GCTAGC 2 cut(s) 902, 1563
BmuI ACTGGG 2 cut(s) 1242, 3299
BpiI GAAGAC 2 cut(s) 937, 3289
BplI GAGNNNNNCTC 4 cut(s) 1455, 1487, 3105, 3137
Bpu10I CCTNAGC 4 cut(s) 607, 1753, 2263, 2442
BpuEI CTTGAG 2 cut(s) 1287, 2937
BsaAI YACGTR 1 cut(s) 243
BsaBI GATNNNNATC 3 cut(s) 297, 631, 2287
BsaHI GRCGYC 3 cut(s) 1704, 1821, 1913
BsaJI CCNNGG 3 cut(s) 700, 2002, 2356
BsaWI WCCGGW 1 cut(s) 2378
BsaXI ACNNNNNCTCC 4 cut(s) 270, 300, 1926, 1956
Bsc4I CCNNNNNNNGG 7 cut(s) 105, 275, 889, 1053, 1931, 2542, 2703
Bse118I RCCGGY 2 cut(s) 98, 1541
Bse3DI GCAATG 4 cut(s) 17, 893, 1688, 2546
Bse8I GATNNNNATC 3 cut(s) 297, 631, 2287
BseAI TCCGGA 1 cut(s) 2378
BseBI CCWGG 3 cut(s) 568, 2003, 2654
BseDI CCNNGG 3 cut(s) 700, 2002, 2356
BseGI GGATG 3 cut(s) 318, 1799, 2419
BseJI GATNNNNATC 3 cut(s) 297, 631, 2287
BseLI CCNNNNNNNGG 7 cut(s) 105, 275, 889, 1053, 1931, 2542, 2703
BseMI GCAATG 4 cut(s) 17, 893, 1688, 2546
BseRI GAGGAG 1 cut(s) 1726
BseSI GKGCMC 1 cut(s) 1591
BseX3I CGGCCG 1 cut(s) 1713
Bsh1236I CGCG 2 cut(s) 625, 2281
Bsh1285I CGRYCG 4 cut(s) 307, 1159, 1716, 1963
BshNI GGYRCC 2 cut(s) 1438, 3088
BsiEI CGRYCG 4 cut(s) 307, 1159, 1716, 1963
BsiHKAI GWGCWC 2 cut(s) 575, 1591
BsiSI CCGG 3 cut(s) 99, 1542, 2379
BslI CCNNNNNNNGG 7 cut(s) 105, 275, 889, 1053, 1931, 2542, 2703
BsmAI GTCTC 2 cut(s) 1725, 2599
BsmI GAATGC 1 cut(s) 1811
Bsp1286I GDGCHC 2 cut(s) 575, 1591
Bsp13I TCCGGA 1 cut(s) 2378
BspEI TCCGGA 1 cut(s) 2378
BspFNI CGCG 2 cut(s) 625, 2281
BspLI GGNNCC 9 cut(s) 6, 280, 613, 837, 1440, 1936, 2269, 2534, 3090
BspMAI CTGCAG 1 cut(s) 2920
BspMI ACCTGC 1 cut(s) 2511
BspOI GCTAGC 2 cut(s) 902, 1563
BspPI GGATC 5 cut(s) 81, 542, 691, 1661, 2198
BspT107I GGYRCC 2 cut(s) 1438, 3088
BsrBI CCGCTC 1 cut(s) 1851
BsrDI GCAATG 4 cut(s) 17, 893, 1688, 2546
BsrFI RCCGGY 2 cut(s) 98, 1541
BssAI RCCGGY 2 cut(s) 98, 1541
BssECI CCNNGG 3 cut(s) 700, 2002, 2356
BssNI GRCGYC 3 cut(s) 1704, 1821, 1913
BssSI CACGAG 1 cut(s) 1835
BssT1I CCWWGG 2 cut(s) 700, 2356
Bst2BI CACGAG 1 cut(s) 1835
Bst2UI CCWGG 3 cut(s) 568, 2003, 2654
Bst4CI ACNGT 3 cut(s) 314, 943, 2593
Bst6I CTCTTC 4 cut(s) 70, 1145, 1990, 2795
BstACI GRCGYC 3 cut(s) 1704, 1821, 1913
BstBAI YACGTR 1 cut(s) 243
BstC8I GCNNGC 9 cut(s) 107, 403, 819, 900, 1561, 1763, 1853, 2673, 2734
BstENI CCTNNNNNAGG 2 cut(s) 887, 2540
BstF5I GGATG 3 cut(s) 318, 1799, 2419
BstFNI CGCG 2 cut(s) 625, 2281
BstHHI GCGC 1 cut(s) 3241
BstMAI GTCTC 2 cut(s) 1725, 2599
BstMCI CGRYCG 4 cut(s) 307, 1159, 1716, 1963
BstNI CCWGG 3 cut(s) 568, 2003, 2654
BstNSI RCATGY 6 cut(s) 405, 853, 1002, 1334, 2652, 2984
BstSCI CCNGG 3 cut(s) 566, 2001, 2652
BstSFI CTRYAG 3 cut(s) 2139, 2916, 2922
BstSLI GKGCMC 1 cut(s) 1591
BstUI CGCG 2 cut(s) 625, 2281
BstV2I GAAGAC 2 cut(s) 937, 3289
BstX2I RGATCY 3 cut(s) 86, 547, 2203
BstYI RGATCY 3 cut(s) 86, 547, 2203
BstZI CGGCCG 1 cut(s) 1713
BtsCI GGATG 3 cut(s) 318, 1799, 2419
BtsI GCAGTG 1 cut(s) 941
BtsIMutI CAGTG 8 cut(s) 544, 558, 941, 1633, 2046, 2214, 2711, 2838
BveI ACCTGC 1 cut(s) 2511
Cac8I GCNNGC 9 cut(s) 107, 403, 819, 900, 1561, 1763, 1853, 2673, 2734
CaiI CAGNNNCTG 1 cut(s) 2586
CfoI GCGC 1 cut(s) 3241
Cfr10I RCCGGY 2 cut(s) 98, 1541
Cfr13I GGNCC 6 cut(s) 111, 197, 1767, 1853, 2098, 2353
CpoI CGGWCCG 2 cut(s) 111, 1767
CseI GACGC 2 cut(s) 1810, 1902
CspI CGGWCCG 2 cut(s) 111, 1767
EaeI YGGCCR 5 cut(s) 1524, 1647, 1713, 2028, 3174
EagI CGGCCG 1 cut(s) 1713
Eam1104I CTCTTC 4 cut(s) 70, 1145, 1990, 2795
EarI CTCTTC 4 cut(s) 70, 1145, 1990, 2795
EciI GGCGGA 4 cut(s) 103, 1560, 1759, 1898
Ecl136II GAGCTC 1 cut(s) 573
EclXI CGGCCG 1 cut(s) 1713
Eco130I CCWWGG 2 cut(s) 700, 2356
Eco24I GRGCYC 1 cut(s) 575
Eco32I GATATC 2 cut(s) 633, 2289
Eco47I GGWCC 3 cut(s) 111, 1767, 2098
Eco52I CGGCCG 1 cut(s) 1713
Eco53kI GAGCTC 1 cut(s) 573
Eco57I CTGAAG 6 cut(s) 640, 1094, 1711, 2296, 2469, 2744
Eco72I CACGTG 1 cut(s) 243
EcoICRI GAGCTC 1 cut(s) 573
EcoNI CCTNNNNNAGG 2 cut(s) 887, 2540
EcoRI GAATTC 2 cut(s) 419, 2334
EcoRII CCWGG 3 cut(s) 566, 2001, 2652
EcoRV GATATC 2 cut(s) 633, 2289
EcoT14I CCWWGG 2 cut(s) 700, 2356
EcoT22I ATGCAT 1 cut(s) 855
EcoT38I GRGCYC 1 cut(s) 575
ErhI CCWWGG 2 cut(s) 700, 2356
FauI CCCGC 1 cut(s) 1844
FauNDI CATATG 1 cut(s) 2428
FbaI TGATCA 2 cut(s) 529, 2185
FblI GTMKAC 3 cut(s) 212, 1868, 2684
FokI GGATG 3 cut(s) 305, 1806, 2426
FriOI GRGCYC 1 cut(s) 575
FspAI RTGCGCAY 1 cut(s) 3240
FspBI CTAG 7 cut(s) 353, 822, 899, 1064, 1191, 1560, 2009
FspI TGCGCA 1 cut(s) 3240
GlaI GCGC 1 cut(s) 3240
HapII CCGG 3 cut(s) 99, 1542, 2379
HgaI GACGC 2 cut(s) 1810, 1902
HhaI GCGC 1 cut(s) 3241
Hin1I GRCGYC 3 cut(s) 1704, 1821, 1913
Hin6I GCGC 1 cut(s) 3239
HinP1I GCGC 1 cut(s) 3239
HincII GTYRAC 5 cut(s) 213, 363, 1869, 2079, 2685
HindII GTYRAC 5 cut(s) 213, 363, 1869, 2079, 2685
HindIII AAGCTT 2 cut(s) 2033, 2172
HpaII CCGG 3 cut(s) 99, 1542, 2379
HphI GGTGA 3 cut(s) 241, 1036, 2501
Hpy99I CGWCG 7 cut(s) 217, 223, 1706, 1709, 1918, 1943, 1946
HpyAV CCTTC 6 cut(s) 393, 913, 1750, 2402, 2493, 2563
HpyCH4III ACNGT 3 cut(s) 314, 943, 2593
HpyCH4IV ACGT 6 cut(s) 185, 234, 242, 1395, 1704, 1841
HpySE526I ACGT 6 cut(s) 185, 234, 242, 1395, 1704, 1841
Hsp92I GRCGYC 3 cut(s) 1704, 1821, 1913
HspAI GCGC 1 cut(s) 3239
Kpn2I TCCGGA 1 cut(s) 2378
KpnI GGTACC 2 cut(s) 1442, 3092
Ksp22I TGATCA 2 cut(s) 529, 2185
LweI GCATC 3 cut(s) 756, 862, 3250
MaeI CTAG 7 cut(s) 353, 822, 899, 1064, 1191, 1560, 2009
MaeII ACGT 6 cut(s) 185, 234, 242, 1395, 1704, 1841
MaeIII GTNAC 5 cut(s) 431, 911, 1333, 1837, 2983
MbiI CCGCTC 1 cut(s) 1851
MfeI CAATTG 1 cut(s) 1014
MflI RGATCY 3 cut(s) 86, 547, 2203
MhlI GDGCHC 2 cut(s) 575, 1591
MlsI TGGCCA 1 cut(s) 1649
MluNI TGGCCA 1 cut(s) 1649
MlyI GAGTC 6 cut(s) 174, 218, 1617, 1727, 1874, 3123
MmeI TCCRAC 1 cut(s) 1854
Mox20I TGGCCA 1 cut(s) 1649
Mph1103I ATGCAT 1 cut(s) 855
MroI TCCGGA 1 cut(s) 2378
MscI TGGCCA 1 cut(s) 1649
MseI TTAA 7 cut(s) 582, 807, 1077, 1187, 2238, 2463, 3155
MslI CAYNNNNRTG 1 cut(s) 692
Msp20I TGGCCA 1 cut(s) 1649
MspA1I CMGCKG 4 cut(s) 393, 2750, 2921, 3195
MspI CCGG 3 cut(s) 99, 1542, 2379
MspR9I CCNGG 3 cut(s) 568, 2003, 2654
MunI CAATTG 1 cut(s) 1014
Mva1269I GAATGC 1 cut(s) 1811
MvaI CCWGG 3 cut(s) 568, 2003, 2654
MvnI CGCG 2 cut(s) 625, 2281
NdeI CATATG 1 cut(s) 2428
NheI GCTAGC 2 cut(s) 898, 1559
NlaIV GGNNCC 9 cut(s) 6, 280, 613, 837, 1440, 1936, 2269, 2534, 3090
NmeAIII GCCGAG 5 cut(s) 1502, 1580, 2006, 3152, 3230
NmuCI GTSAC 1 cut(s) 1837
NsbI TGCGCA 1 cut(s) 3240
NsiI ATGCAT 1 cut(s) 855
NspI RCATGY 6 cut(s) 405, 853, 1002, 1334, 2652, 2984
PaeI GCATGC 1 cut(s) 405
PciI ACATGT 2 cut(s) 1330, 2980
PcsI WCGNNNNNNNCGW 2 cut(s) 1713, 1938
PctI GAATGC 1 cut(s) 1811
PleI GAGTC 6 cut(s) 173, 217, 1617, 1727, 1873, 3122
PmaCI CACGTG 1 cut(s) 243
PmlI CACGTG 1 cut(s) 243
PpsI GAGTC 6 cut(s) 173, 217, 1617, 1727, 1873, 3122
Ppu21I YACGTR 1 cut(s) 243
PscI ACATGT 2 cut(s) 1330, 2980
PsiI TTATAA 3 cut(s) 125, 1781, 2577
Psp124BI GAGCTC 1 cut(s) 575
Psp1406I AACGTT 1 cut(s) 185
Psp6I CCWGG 3 cut(s) 566, 2001, 2652
PspCI CACGTG 1 cut(s) 243
PspGI CCWGG 3 cut(s) 566, 2001, 2652
PspN4I GGNNCC 9 cut(s) 6, 280, 613, 837, 1440, 1936, 2269, 2534, 3090
PspPI GGNCC 6 cut(s) 111, 197, 1767, 1853, 2098, 2353
PstI CTGCAG 1 cut(s) 2920
PstNI CAGNNNCTG 1 cut(s) 2586
PsuI RGATCY 3 cut(s) 86, 547, 2203
PvuII CAGCTG 2 cut(s) 2750, 2921
RseI CAYNNNNRTG 1 cut(s) 692
Rsr2I CGGWCCG 2 cut(s) 111, 1767
RsrII CGGWCCG 2 cut(s) 111, 1767
SacI GAGCTC 1 cut(s) 575
SalI GTCGAC 3 cut(s) 211, 1867, 2683
SaqAI TTAA 7 cut(s) 582, 807, 1077, 1187, 2238, 2463, 3155
Sau96I GGNCC 6 cut(s) 111, 197, 1767, 1853, 2098, 2353
ScaI AGTACT 3 cut(s) 826, 1373, 3023
SchI GAGTC 6 cut(s) 174, 218, 1617, 1727, 1874, 3123
ScrFI CCNGG 3 cut(s) 568, 2003, 2654
SduI GDGCHC 2 cut(s) 575, 1591
SfaNI GCATC 3 cut(s) 756, 862, 3250
SfcI CTRYAG 3 cut(s) 2139, 2916, 2922
SgrAI CRCCGGYG 1 cut(s) 98
SinI GGWCC 3 cut(s) 111, 1767, 2098
SmiMI CAYNNNNRTG 1 cut(s) 692
SmlI CTYRAG 2 cut(s) 1302, 2952
SmoI CTYRAG 2 cut(s) 1302, 2952
SphI GCATGC 1 cut(s) 405
SspI AATATT 1 cut(s) 2109
SspMI CTAG 7 cut(s) 353, 822, 899, 1064, 1191, 1560, 2009
SstI GAGCTC 1 cut(s) 575
StyD4I CCNGG 3 cut(s) 566, 2001, 2652
StyI CCWWGG 2 cut(s) 700, 2356
TaaI ACNGT 3 cut(s) 314, 943, 2593
TaiI ACGT 6 cut(s) 188, 237, 245, 1398, 1707, 1844
TaqII GACCGA 3 cut(s) 293, 428, 1949
TatI WGTACW 7 cut(s) 824, 938, 995, 1371, 2588, 2645, 3021
TauI GCSGC 8 cut(s) 105, 227, 260, 1103, 1715, 1761, 1775, 1883
Tru1I TTAA 7 cut(s) 582, 807, 1077, 1187, 2238, 2463, 3155
Tru9I TTAA 7 cut(s) 582, 807, 1077, 1187, 2238, 2463, 3155
TscAI CASTG 8 cut(s) 544, 558, 941, 1633, 2053, 2214, 2718, 2845
TseFI GTSAC 1 cut(s) 1837
Tsp45I GTSAC 1 cut(s) 1837
TspDTI ATGAA 7 cut(s) 285, 432, 1132, 1461, 2782, 2948, 3111
TspGWI ACGGA 1 cut(s) 774
TspRI CASTG 8 cut(s) 544, 558, 941, 1633, 2053, 2214, 2718, 2845
VneI GTGCAC 1 cut(s) 1587
VpaK11BI GGWCC 3 cut(s) 111, 1767, 2098
XagI CCTNNNNNAGG 2 cut(s) 887, 2540
XapI RAATTY 3 cut(s) 419, 878, 2334
XbaI TCTAGA 1 cut(s) 1063
XceI RCATGY 6 cut(s) 405, 853, 1002, 1334, 2652, 2984
XcmI CCANNNNNNNNNTGG 2 cut(s) 1350, 3000
XmiI GTMKAC 3 cut(s) 212, 1868, 2684
XspI CTAG 7 cut(s) 353, 822, 899, 1064, 1191, 1560, 2009
ZraI GACGTC 1 cut(s) 1705
ZrmI AGTACT 3 cut(s) 826, 1373, 3023
Zsp2I ATGCAT 1 cut(s) 855
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.