Rorug07G0243600

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000191
Physical Location & Seq
Reverse (-)
22495699 .. 22501432
5734 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0243600.1

Sequence Viewer

Length: 1899 bp
ATGTCATCACCTATCTCTTACCTCCTTGCAGCTCTTCTCTCACTCCTGTTATTCAACTTCCATGGAAGCAAAGCCGACTTTGTACCCACAAAAAATTGCCCCATATACAATTGTGGTAATGGCCATGATTTTCACTACCCTTTTTGGAAAATTGAAGACTCCACCGCCGATCAATATTGTGGTTACCCTGGTTTTGGTCTCAATTGCTCAGAGTCCGGAGAGCCAATACTAAGTCTCCCAAATAATGACTCCTACTATGTGAAAGACATAAACTTCATTGATTCCACCATCACCCTCGTTGACATAGACATCTTCGATCAACAATGCCCTAGGGCAAGACACAGTATTAGTGTAGGCACGCTCCCATTGGATTATTCCCCATTGGATGTGAACCTGAGCTTCTACTTCAACTGCACTTCCTTTCCTGATCCTTTTAAGCCTCCCATAACCTGCTTGGGAATATGGGGTACCAAAAAGTCTTATGTTATCATGAAGGGAGAGCAATCAGATGGGTTTGATTGGTCTGAAAGTTGTGAGGAGAATGTGGTGGTGACTGTGATGAAGACTAAGGAGCTTTATATTATTATTGATGAGTTGATTGGTGCTTTTGGAGGGCTTATGAACCAGGGGTTTGTGCTTAACTGGACCACGGCGAAGGAGTGCGCTTCGTGTGAGAGTGGTGGTGGTTTGTGTGGGTACAACCCCACTAAAGCTGATGAGTTTCTCTGCTTCTGCAAATATGGCAATGACCTATGCAGGAAGAAAGGCCCTAAGTTCAACTGGAGATTGAAGGTTGTCGTAGGTCCTTGCTCGGTTATTGGAACTATAGCTGTAATGTGCTTCATTTTCTTTATATGGCGACGCCGCAACAGAAATCGATATGGTCCATCATCCTATGCATCTCAAAGCATCTATTCTAAAAGTTATTCTAGAAGTGATACTAAGAAGGGAACTGCATACCCTGGAGTTCATGTCTTCACTTACAAGGAACTTGAACAAGCAACAAACTATTTCGATTCATCTAAAAAACTTGGTGATGGAGGCTTTGGCACTGTTTACTATGGAAGAGTCCGTGATGGGCGAGCAGTTGCTGTCAAGCGACTATATGAAACCAATTGCAAGAGAATTGAGCAGTTCCTGAATGAAATTGAGATTTTAGCTCGCCTACGCCACCAAAACCTTGTCTTACTCTATGGATGCACCTCTCATCACAGCAGTGAACTCCTCCTTGTCTACGAATATGTTCCCAATGGAACTATTGCTAATCATCTTCACGGTGGAAAAGCAAAACCCGGTGTGCTGCCATGGCATACTCGAATCAACATTGCCGTAGAAACTGCAAGTGCATTGTCCTATCTTCATGCGTCTGAGATCATCCACCGCGATGTGAAAACCACTAACATTCTCCTCGACAACAATTTCTGTGTCAAAGTAGCAGATTTTGGACTATCTCGTCTCTTTCCCATGGATGTCACCCATGTATCAACTGCTCCACAAGGAACTCCAGGTTATGTCGATCCTGATTATATCCAATGCTACCAGCTTACTACAAAGAGTGATGTCTATAGCTTCGGTGTGGTCCTGGTTGAACTCATATCATCCTTGCCTGCTGTTGATGTCACAAGGCATCGACAGGAGATCAATTTGTCGAACATGGCTATCAACAAGATTCAGAAAAATGCATTGCATGAGCTAGTTGATCCATCCCTGGGGTATGAGTCAGACCTTAAAGTAAGAAAAATGATCAATGCAGTGGCGGAATTAGCGTTTCGGTGCCTGCAAAATGAGACGGACATGAGGCCTTCTATGGTTGATGTGGAAAATGAACTAAAGAGGATACAGAGTGATGATTTTAACAAAGAAATTAAAGGCAGAGGAAATAGATATTTCAGTCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

632

Amino Acids

71.18

Weight (kDa)

6.94

Isoelectric Point (pI)

36.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 33 - 101 9.4e-17 Wall-associated receptor kinase galacturonan-binding
WAK_assoc PF14380 156 - 246 2.9e-17 Wall-associated receptor kinase C-terminal
Pkinase PF00069 339 - 606 5.2e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 341 - 610 5.4e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1452
Acc36I ACCTGC 1 cut(s) 458
Acc65I GGTACC 1 cut(s) 467
AccB1I GGYRCC 2 cut(s) 467, 1773
AccI GTMKAC 1 cut(s) 1233
AccII CGCG 1 cut(s) 1383
AccIII TCCGGA 1 cut(s) 215
AciI CCGC 4 cut(s) 165, 865, 1381, 1757
AclWI GGATC 3 cut(s) 422, 1511, 1694
AcoI YGGCCR 1 cut(s) 121
AcyI GRCGYC 1 cut(s) 862
AfaI GTAC 3 cut(s) 84, 469, 698
AfiI CCNNNNNNNGG 2 cut(s) 194, 1709
AgsI TTSAA 7 cut(s) 55, 155, 409, 778, 790, 995, 1589
AjnI CCWGG 6 cut(s) 187, 624, 961, 1504, 1581, 1707
AleI CACNNNNGTG 1 cut(s) 1215
AluBI AGCT 9 cut(s) 32, 399, 574, 713, 830, 1160, 1543, 1569, 1693
AluI AGCT 9 cut(s) 32, 399, 574, 713, 830, 1160, 1543, 1569, 1693
Alw26I GTCTC 4 cut(s) 203, 239, 1460, 1781
AlwI GGATC 3 cut(s) 422, 1511, 1694
AlwNI CAGNNNCTG 2 cut(s) 1091, 1138
Aor13HI TCCGGA 1 cut(s) 215
AoxI GGCC 3 cut(s) 121, 766, 1799
ApeKI GCWGC 2 cut(s) 29, 1300
Asp700I GAANNNNTTC 1 cut(s) 1242
Asp718I GGTACC 1 cut(s) 467
AspA2I CCTAGG 1 cut(s) 329
AspLEI GCGC 1 cut(s) 665
AspS9I GGNCC 5 cut(s) 645, 767, 803, 884, 1579
AsuC2I CCSGG 1 cut(s) 1293
AsuHPI GGTGA 4 cut(s) 283, 562, 1046, 1465
AvaII GGWCC 4 cut(s) 645, 803, 884, 1579
AvrII CCTAGG 1 cut(s) 329
BaeI ACNNNNGTAYC 2 cut(s) 1464, 1497
BalI TGGCCA 1 cut(s) 123
BanI GGYRCC 2 cut(s) 467, 1773
BbsI GAAGAC 3 cut(s) 162, 569, 967
BbvI GCAGC 2 cut(s) 41, 1287
BccI CCATC 6 cut(s) 296, 503, 895, 1031, 1070, 1711
BceAI ACGGC 2 cut(s) 666, 1313
BciT130I CCWGG 6 cut(s) 189, 626, 963, 1506, 1583, 1709
BciVI GTATCC 1 cut(s) 1830
BclI TGATCA 1 cut(s) 1743
BcnI CCSGG 1 cut(s) 1293
BcoDI GTCTC 4 cut(s) 203, 239, 1460, 1781
BfaI CTAG 3 cut(s) 330, 930, 1694
BfmI CTRYAG 2 cut(s) 825, 1564
BfuAI ACCTGC 1 cut(s) 458
BfuI GTATCC 1 cut(s) 1830
BisI GCNGC 3 cut(s) 30, 865, 1301
BlnI CCTAGG 1 cut(s) 329
BlsI GCNGC 3 cut(s) 31, 866, 1302
Bme1390I CCNGG 7 cut(s) 189, 626, 963, 1293, 1506, 1583, 1709
Bme18I GGWCC 4 cut(s) 645, 803, 884, 1579
BmgT120I GGNCC 5 cut(s) 645, 767, 803, 884, 1579
BmiI GGNNCC 2 cut(s) 469, 1775
BmrFI CCNGG 7 cut(s) 189, 626, 963, 1293, 1506, 1583, 1709
BmsI GCATC 4 cut(s) 908, 918, 1187, 1636
BpiI GAAGAC 3 cut(s) 162, 569, 967
BpmI CTGGAG 3 cut(s) 802, 984, 1488
Bpu10I CCTNAGC 1 cut(s) 395
BpuMI CCSGG 1 cut(s) 1293
Bsa29I ATCGAT 1 cut(s) 877
BsaHI GRCGYC 1 cut(s) 862
BsaI GGTCTC 1 cut(s) 203
BsaWI WCCGGW 1 cut(s) 215
BsaXI ACNNNNNCTCC 4 cut(s) 219, 249, 957, 987
Bsc4I CCNNNNNNNGG 2 cut(s) 194, 1709
Bse1I ACTGG 2 cut(s) 647, 785
Bse3DI GCAATG 3 cut(s) 751, 1323, 1682
BseAI TCCGGA 1 cut(s) 215
BseBI CCWGG 6 cut(s) 189, 626, 963, 1506, 1583, 1709
BseCI ATCGAT 1 cut(s) 877
BseGI GGATG 7 cut(s) 391, 890, 1202, 1374, 1474, 1598, 1703
BseLI CCNNNNNNNGG 2 cut(s) 194, 1709
BseMI GCAATG 3 cut(s) 751, 1323, 1682
BseMII CTCAG 3 cut(s) 222, 386, 1359
BseNI ACTGG 2 cut(s) 647, 785
BseRI GAGGAG 3 cut(s) 551, 1214, 1397
BseXI GCAGC 2 cut(s) 41, 1287
BsgI GTGCAG 1 cut(s) 397
Bsh1236I CGCG 1 cut(s) 1383
BshFI GGCC 3 cut(s) 123, 768, 1801
BshNI GGYRCC 2 cut(s) 467, 1773
BshVI ATCGAT 1 cut(s) 877
BsiSI CCGG 2 cut(s) 216, 1293
BslI CCNNNNNNNGG 2 cut(s) 194, 1709
BsmAI GTCTC 4 cut(s) 203, 239, 1460, 1781
BsmBI CGTCTC 2 cut(s) 1460, 1781
BsnI GGCC 3 cut(s) 123, 768, 1801
Bso31I GGTCTC 1 cut(s) 203
Bsp13I TCCGGA 1 cut(s) 215
Bsp143I GATC 8 cut(s) 169, 316, 427, 1371, 1516, 1638, 1699, 1743
Bsp19I CCATGG 3 cut(s) 61, 1304, 1464
BspACI CCGC 4 cut(s) 165, 865, 1381, 1757
BspANI GGCC 3 cut(s) 123, 768, 1801
BspCNI CTCAG 3 cut(s) 221, 387, 1360
BspDI ATCGAT 1 cut(s) 877
BspEI TCCGGA 1 cut(s) 215
BspFNI CGCG 1 cut(s) 1383
BspHI TCATGA 1 cut(s) 489
BspLI GGNNCC 2 cut(s) 469, 1775
BspMI ACCTGC 1 cut(s) 458
BspPI GGATC 3 cut(s) 422, 1511, 1694
BspQI GCTCTTC 1 cut(s) 39
BspT107I GGYRCC 2 cut(s) 467, 1773
BspTNI GGTCTC 1 cut(s) 203
BsrDI GCAATG 3 cut(s) 751, 1323, 1682
BsrI ACTGG 2 cut(s) 647, 785
BssMI GATC 8 cut(s) 169, 316, 427, 1371, 1516, 1638, 1699, 1743
BssNI GRCGYC 1 cut(s) 862
BssT1I CCWWGG 4 cut(s) 61, 329, 1304, 1464
Bst2UI CCWGG 6 cut(s) 189, 626, 963, 1506, 1583, 1709
Bst4CI ACNGT 4 cut(s) 344, 556, 1054, 1277
Bst6I CTCTTC 2 cut(s) 39, 1060
BstACI GRCGYC 1 cut(s) 862
BstC8I GCNNGC 5 cut(s) 359, 1083, 1162, 1608, 1778
BstDEI CTNAG 7 cut(s) 208, 230, 395, 567, 771, 942, 1368
BstDSI CCRYGG 4 cut(s) 61, 648, 1304, 1464
BstEII GGTNACC 1 cut(s) 182
BstF5I GGATG 7 cut(s) 391, 890, 1202, 1374, 1474, 1598, 1703
BstFNI CGCG 1 cut(s) 1383
BstHHI GCGC 1 cut(s) 665
BstKTI GATC 8 cut(s) 172, 319, 430, 1374, 1519, 1641, 1702, 1746
BstMAI GTCTC 4 cut(s) 203, 239, 1460, 1781
BstMBI GATC 8 cut(s) 169, 316, 427, 1371, 1516, 1638, 1699, 1743
BstMWI GCNNNNNNNGC 3 cut(s) 741, 1306, 1763
BstNI CCWGG 6 cut(s) 189, 626, 963, 1506, 1583, 1709
BstPI GGTNACC 1 cut(s) 182
BstSCI CCNGG 7 cut(s) 187, 624, 961, 1291, 1504, 1581, 1707
BstSFI CTRYAG 2 cut(s) 825, 1564
BstUI CGCG 1 cut(s) 1383
BstV1I GCAGC 2 cut(s) 41, 1287
BstV2I GAAGAC 3 cut(s) 162, 569, 967
Bsu15I ATCGAT 1 cut(s) 877
BsuI GTATCC 1 cut(s) 1830
BsuRI GGCC 3 cut(s) 123, 768, 1801
BsuTUI ATCGAT 1 cut(s) 877
BtgI CCRYGG 4 cut(s) 61, 648, 1304, 1464
BtgZI GCGATG 1 cut(s) 1398
BtsCI GGATG 7 cut(s) 391, 890, 1202, 1374, 1474, 1598, 1703
BtsI GCAGTG 2 cut(s) 1222, 1758
BtsIMutI CAGTG 3 cut(s) 1050, 1222, 1758
BveI ACCTGC 1 cut(s) 458
Cac8I GCNNGC 5 cut(s) 359, 1083, 1162, 1608, 1778
CaiI CAGNNNCTG 2 cut(s) 1091, 1138
CciI TCATGA 1 cut(s) 489
CfoI GCGC 1 cut(s) 665
Cfr13I GGNCC 5 cut(s) 645, 767, 803, 884, 1579
ClaI ATCGAT 1 cut(s) 877
CseI GACGC 2 cut(s) 870, 1353
Csp6I GTAC 3 cut(s) 83, 468, 697
CviQI GTAC 3 cut(s) 83, 468, 697
DdeI CTNAG 7 cut(s) 208, 230, 395, 567, 771, 942, 1368
DpnI GATC 8 cut(s) 171, 318, 429, 1373, 1518, 1640, 1701, 1745
DpnII GATC 8 cut(s) 169, 316, 427, 1371, 1516, 1638, 1699, 1743
DrdI GACNNNNNNGTC 1 cut(s) 1452
DseDI GACNNNNNNGTC 1 cut(s) 1452
EaeI YGGCCR 1 cut(s) 121
Eam1104I CTCTTC 2 cut(s) 39, 1060
EarI CTCTTC 2 cut(s) 39, 1060
EciI GGCGGA 1 cut(s) 1772
Eco130I CCWWGG 4 cut(s) 61, 329, 1304, 1464
Eco147I AGGCCT 1 cut(s) 1801
Eco31I GGTCTC 1 cut(s) 203
Eco47I GGWCC 4 cut(s) 645, 803, 884, 1579
Eco91I GGTNACC 1 cut(s) 182
EcoO109I RGGNCCY 2 cut(s) 767, 803
EcoO65I GGTNACC 1 cut(s) 182
EcoRII CCWGG 6 cut(s) 187, 624, 961, 1504, 1581, 1707
EcoT14I CCWWGG 4 cut(s) 61, 329, 1304, 1464
EcoT22I ATGCAT 2 cut(s) 901, 1684
ErhI CCWWGG 4 cut(s) 61, 329, 1304, 1464
Esp3I CGTCTC 2 cut(s) 1460, 1781
FbaI TGATCA 1 cut(s) 1743
FblI GTMKAC 1 cut(s) 1233
Fnu4HI GCNGC 3 cut(s) 30, 865, 1301
FokI GGATG 7 cut(s) 398, 877, 1209, 1361, 1481, 1585, 1690
Fsp4HI GCNGC 3 cut(s) 30, 865, 1301
FspBI CTAG 3 cut(s) 330, 930, 1694
GlaI GCGC 1 cut(s) 664
GluI GCNGC 3 cut(s) 30, 865, 1301
GsuI CTGGAG 3 cut(s) 802, 984, 1488
HaeIII GGCC 3 cut(s) 123, 768, 1801
HapII CCGG 2 cut(s) 216, 1293
HgaI GACGC 2 cut(s) 870, 1353
HhaI GCGC 1 cut(s) 665
Hin1I GRCGYC 1 cut(s) 862
Hin6I GCGC 1 cut(s) 663
HinP1I GCGC 1 cut(s) 663
HincII GTYRAC 1 cut(s) 301
HindII GTYRAC 1 cut(s) 301
HinfI GANTC 9 cut(s) 158, 212, 248, 281, 1016, 1068, 1317, 1669, 1718
HpaII CCGG 2 cut(s) 216, 1293
HphI GGTGA 4 cut(s) 283, 562, 1046, 1465
Hpy166II GTNNAC 5 cut(s) 301, 391, 1057, 1220, 1234
Hpy188I TCNGA 6 cut(s) 211, 508, 526, 1369, 1674, 1723
Hpy188III TCNNGA 6 cut(s) 216, 425, 490, 930, 1138, 1520
Hpy8I GTNNAC 5 cut(s) 301, 391, 1057, 1220, 1234
Hpy99I CGWCG 1 cut(s) 864
HpyAV CCTTC 5 cut(s) 487, 649, 784, 940, 1812
HpyCH4III ACNGT 4 cut(s) 344, 556, 1054, 1277
HpyF10VI GCNNNNNNNGC 3 cut(s) 741, 1306, 1763
HpyF3I CTNAG 7 cut(s) 208, 230, 395, 567, 771, 942, 1368
Hsp92I GRCGYC 1 cut(s) 862
HspAI GCGC 1 cut(s) 663
Kpn2I TCCGGA 1 cut(s) 215
KpnI GGTACC 1 cut(s) 471
Ksp22I TGATCA 1 cut(s) 1743
Kzo9I GATC 8 cut(s) 169, 316, 427, 1371, 1516, 1638, 1699, 1743
LguI GCTCTTC 1 cut(s) 39
LmnI GCTCC 3 cut(s) 366, 571, 1495
Lsp1109I GCAGC 2 cut(s) 41, 1287
LweI GCATC 4 cut(s) 908, 918, 1187, 1636
MaeI CTAG 3 cut(s) 330, 930, 1694
MaeIII GTNAC 4 cut(s) 182, 550, 1471, 1618
MalI GATC 8 cut(s) 171, 318, 429, 1373, 1518, 1640, 1701, 1745
MboI GATC 8 cut(s) 169, 316, 427, 1371, 1516, 1638, 1699, 1743
MboII GAAGA 9 cut(s) 26, 167, 304, 574, 772, 967, 1077, 1262, 1349
MfeI CAATTG 3 cut(s) 109, 202, 1114
MlsI TGGCCA 1 cut(s) 123
MluNI TGGCCA 1 cut(s) 123
MlyI GAGTC 5 cut(s) 152, 221, 242, 1077, 1727
Mox20I TGGCCA 1 cut(s) 123
Mph1103I ATGCAT 2 cut(s) 901, 1684
MroI TCCGGA 1 cut(s) 215
MroXI GAANNNNTTC 1 cut(s) 1242
MscI TGGCCA 1 cut(s) 123
MseI TTAA 5 cut(s) 435, 639, 1728, 1854, 1866
MslI CAYNNNNRTG 2 cut(s) 1215, 1383
Msp20I TGGCCA 1 cut(s) 123
MspI CCGG 2 cut(s) 216, 1293
MspR9I CCNGG 7 cut(s) 189, 626, 963, 1293, 1506, 1583, 1709
MunI CAATTG 3 cut(s) 109, 202, 1114
MvaI CCWGG 6 cut(s) 189, 626, 963, 1506, 1583, 1709
MvnI CGCG 1 cut(s) 1383
MwoI GCNNNNNNNGC 3 cut(s) 741, 1306, 1763
NciI CCSGG 1 cut(s) 1293
NcoI CCATGG 3 cut(s) 61, 1304, 1464
NdeII GATC 8 cut(s) 169, 316, 427, 1371, 1516, 1638, 1699, 1743
NlaIV GGNNCC 2 cut(s) 469, 1775
NmuCI GTSAC 3 cut(s) 550, 1471, 1618
NsiI ATGCAT 2 cut(s) 901, 1684
OliI CACNNNNGTG 1 cut(s) 1215
PagI TCATGA 1 cut(s) 489
PasI CCCWGGG 1 cut(s) 1708
PceI AGGCCT 1 cut(s) 1801
PciSI GCTCTTC 1 cut(s) 39
PdmI GAANNNNTTC 1 cut(s) 1242
PfeI GAWTC 4 cut(s) 281, 1016, 1317, 1669
PkrI GCNGC 3 cut(s) 31, 866, 1302
PleI GAGTC 5 cut(s) 152, 220, 242, 1076, 1726
PpsI GAGTC 5 cut(s) 152, 220, 242, 1076, 1726
PpuMI RGGWCCY 1 cut(s) 803
Psp5II RGGWCCY 1 cut(s) 803
Psp6I CCWGG 6 cut(s) 187, 624, 961, 1504, 1581, 1707
PspEI GGTNACC 1 cut(s) 182
PspGI CCWGG 6 cut(s) 187, 624, 961, 1504, 1581, 1707
PspN4I GGNNCC 2 cut(s) 469, 1775
PspPI GGNCC 5 cut(s) 645, 767, 803, 884, 1579
PspPPI RGGWCCY 1 cut(s) 803
PstNI CAGNNNCTG 2 cut(s) 1091, 1138
RsaI GTAC 3 cut(s) 84, 469, 698
RsaNI GTAC 3 cut(s) 83, 468, 697
RseI CAYNNNNRTG 2 cut(s) 1215, 1383
SapI GCTCTTC 1 cut(s) 39
SaqAI TTAA 5 cut(s) 435, 639, 1728, 1854, 1866
SatI GCNGC 3 cut(s) 30, 865, 1301
Sau3AI GATC 8 cut(s) 169, 316, 427, 1371, 1516, 1638, 1699, 1743
Sau96I GGNCC 5 cut(s) 645, 767, 803, 884, 1579
SchI GAGTC 5 cut(s) 152, 221, 242, 1077, 1727
ScrFI CCNGG 7 cut(s) 189, 626, 963, 1293, 1506, 1583, 1709
SfaNI GCATC 4 cut(s) 908, 918, 1187, 1636
SfcI CTRYAG 2 cut(s) 825, 1564
SinI GGWCC 4 cut(s) 645, 803, 884, 1579
SmiMI CAYNNNNRTG 2 cut(s) 1215, 1383
SseBI AGGCCT 1 cut(s) 1801
SsiI CCGC 4 cut(s) 165, 865, 1381, 1757
SspI AATATT 1 cut(s) 176
SspMI CTAG 3 cut(s) 330, 930, 1694
StuI AGGCCT 1 cut(s) 1801
StyD4I CCNGG 7 cut(s) 187, 624, 961, 1291, 1504, 1581, 1707
StyI CCWWGG 4 cut(s) 61, 329, 1304, 1464
TaaI ACNGT 4 cut(s) 344, 556, 1054, 1277
TaqI TCGA 9 cut(s) 315, 877, 1014, 1315, 1410, 1515, 1630, 1649, 1894
TauI GCSGC 1 cut(s) 867
TfiI GAWTC 4 cut(s) 281, 1016, 1317, 1669
Tru1I TTAA 5 cut(s) 435, 639, 1728, 1854, 1866
Tru9I TTAA 5 cut(s) 435, 639, 1728, 1854, 1866
TscAI CASTG 3 cut(s) 1057, 1222, 1758
TseFI GTSAC 3 cut(s) 550, 1471, 1618
TseI GCWGC 2 cut(s) 29, 1300
Tsp45I GTSAC 3 cut(s) 550, 1471, 1618
TspGWI ACGGA 2 cut(s) 1061, 1805
TspRI CASTG 3 cut(s) 1057, 1222, 1758
VpaK11BI GGWCC 4 cut(s) 645, 803, 884, 1579
XbaI TCTAGA 1 cut(s) 929
XcmI CCANNNNNNNNNTGG 1 cut(s) 451
XmaJI CCTAGG 1 cut(s) 329
XmiI GTMKAC 1 cut(s) 1233
XmnI GAANNNNTTC 1 cut(s) 1242
XspI CTAG 3 cut(s) 330, 930, 1694
Zsp2I ATGCAT 2 cut(s) 901, 1684
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.