Rh7BG378100

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000191
Physical Location & Seq
Reverse (-)
40661612 .. 40664948
3337 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG378100.1

Sequence Viewer

Length: 1425 bp
ATGGCTACATCTCTCGAAGAATCTCCGGAGACCCGAACTCCACTCCTAGACGACGTCGTAGACGGCGCCGTTGACTACAAAGGCCATCAGGTCCACAGATCAACCTCCGGCGGTTGGCGTTCCGCATCCTTCATAATAGGAGTGGAAGTTGCGGAGAGGTCTGCCTACTATGGAATAAGCTCGAATCTAATAACGTTTCTGACGGGGCCGTTGGGACAGTCGACGGCGACGGCGGCGGAGAATGTGAACATATGGTTCGGAACGGCGTCGTTGCTTCCTCTATTGGGAGCGTTCGTGGCGGATTCTTTTCTCGGACGCTACCGCACCATTATTGCTGCTTCTCTCCTCTACATTTTGGGACTCGGCTTGTTGACTGTGTCGGCCTTGCTTACTTCTTCTGAGCTTCAAATATTGTTATTCTTCTTCTCTCTATATCTAGTAGCAGTTGCGCAAGGTGGACACAAGCCCTGTGTTCAGGCTTTTGGGGCAGATCAGTTTGATGGACAAGATCCAGAGGAGTGCAAAGCGAAAAGCTCATTCTTCAATTGGTGGTACTTTGGCATCTGTACAGGCTCACTATTCACAGTCTTGGTATTGGCCTACATACAGGACAATCTAAGCTGGGGTCTGGGTTTTGGAATTCCATGTGTTGTGATGGTCCTTGCACTGATTATTTTTGTCAGTGGAACTAGAACATACCGGTATAGCATCAAAGGGGAGGAGGAAAGCCCATTTGTGAGAATCGGCAAGGTTTTTGTTGCTGCATTAAGGAACCGGCGAACTAGTTCTTCAGCAATAGCTTCTGAAGAAGAATCCCGTGGAACCTTGCCTGATCAAAGTTCTGAACAATTCAAGTTCCTCAACAAAGCCTTGCTTGCACCAGATGATTTGAAGAAAAACGGGAAGGTGTGTACCATCGCTGAGGTTGAGGAAGCAAAGGCTGTTCTTAGGCTGTTTCCAATATGGGCTACATCCTTGGCATATGCTATTGTATTTGCACAGTGCACTACTTTCTTCACCAAGCAAGGTGCCACCATGGACAGAACTATTGTCCCCGGTTTCGACATACCAGCTGCTTCACTTCAGTCATTTATCAGCCTTGCCATAATGATAGTCATACCCATGTATGACCGCATTTTTGTTCCAATGGCAAGAGCTTTCACTAGAGAACCCTCTGGCATTACAATGCTACAAAGAATCGGAACTGGGATGTTTTTCTCTATCATTTCTATGGTTGTTGCAGCTTTAGTTGAGATAAAAAGGCTCCAAACTGCGAAAGATTATGATCTGGTTGATCTGCCAAGTGTCACAATTCCAATGAGTATTTGGTGGTTAGTTCCTCAGTACTTCTTGTATGGACTAGCCGATGCTTTCACCATGGTTGGTCTACAAGAGTTCTTCTACGATCAGCACTCAGTGCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

474

Amino Acids

52.14

Weight (kDa)

5.31

Isoelectric Point (pI)

43.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 59 - 465 9.9e-12 Major Facilitator Superfamily
PTR2 PF00854 107 - 471 8.1e-92 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 57
Acc16I TGCGCA 1 cut(s) 450
AccB1I GGYRCC 2 cut(s) 65, 1028
AccI GTMKAC 3 cut(s) 60, 221, 1387
AccIII TCCGGA 1 cut(s) 25
AciI CCGC 8 cut(s) 111, 123, 152, 233, 236, 299, 322, 1132
AclI AACGTT 1 cut(s) 194
AclWI GGATC 1 cut(s) 503
AcsI RAATTY 1 cut(s) 639
AcuI CTGAAG 3 cut(s) 774, 825, 1067
AcyI GRCGYC 3 cut(s) 54, 66, 266
AdeI CACNNNGTG 1 cut(s) 1417
AfaI GTAC 4 cut(s) 554, 568, 913, 1346
AfiI CCNNNNNNNGG 2 cut(s) 114, 284
AgeI ACCGGT 1 cut(s) 699
AgsI TTSAA 4 cut(s) 407, 544, 853, 892
AhlI ACTAGT 1 cut(s) 782
AluBI AGCT 8 cut(s) 180, 403, 534, 621, 800, 1073, 1157, 1244
AluI AGCT 8 cut(s) 180, 403, 534, 621, 800, 1073, 1157, 1244
Alw21I GWGCWC 1 cut(s) 1007
Alw26I GTCTC 1 cut(s) 23
Alw44I GTGCAC 1 cut(s) 1003
AlwI GGATC 1 cut(s) 503
Aor13HI TCCGGA 1 cut(s) 25
AoxI GGCC 4 cut(s) 82, 206, 381, 597
ApaLI GTGCAC 1 cut(s) 1003
ApeKI GCWGC 4 cut(s) 335, 761, 1073, 1241
ApoI RAATTY 1 cut(s) 639
ArsI GACNNNNNNTTYG 2 cut(s) 1121, 1153
AsiGI ACCGGT 1 cut(s) 699
Asp700I GAANNNNTTC 1 cut(s) 784
AspLEI GCGC 2 cut(s) 68, 451
AspS9I GGNCC 3 cut(s) 91, 206, 658
AsuC2I CCSGG 1 cut(s) 1056
AsuHPI GGTGA 2 cut(s) 1009, 1366
AvaII GGWCC 2 cut(s) 91, 658
BaeGI GKGCMC 1 cut(s) 1007
BanI GGYRCC 2 cut(s) 65, 1028
Bbv12I GWGCWC 1 cut(s) 1007
BbvCI CCTCAGC 1 cut(s) 921
BbvI GCAGC 4 cut(s) 322, 748, 1060, 1253
BccI CCATC 4 cut(s) 93, 494, 649, 923
BceAI ACGGC 6 cut(s) 53, 79, 193, 240, 246, 279
BclI TGATCA 1 cut(s) 832
BcnI CCSGG 1 cut(s) 1056
BcoDI GTCTC 1 cut(s) 23
BcuI ACTAGT 1 cut(s) 782
BfaI CTAG 6 cut(s) 47, 437, 690, 783, 1164, 1361
BfoI RGCGCY 1 cut(s) 69
BisI GCNGC 5 cut(s) 234, 336, 762, 1074, 1242
BlsI GCNGC 5 cut(s) 235, 337, 763, 1075, 1243
BmcAI AGTACT 1 cut(s) 1346
Bme1390I CCNGG 1 cut(s) 1056
Bme18I GGWCC 2 cut(s) 91, 658
BmgT120I GGNCC 3 cut(s) 91, 206, 658
BmiI GGNNCC 6 cut(s) 67, 207, 773, 823, 1030, 1265
BmrFI CCNGG 1 cut(s) 1056
BmrI ACTGGG 1 cut(s) 1215
BmsI GCATC 4 cut(s) 134, 570, 717, 1357
BmuI ACTGGG 1 cut(s) 1215
Bpu10I CCTNAGC 1 cut(s) 921
BpuMI CCSGG 1 cut(s) 1056
BsaBI GATNNNNATC 1 cut(s) 1284
BsaHI GRCGYC 3 cut(s) 54, 66, 266
BsaI GGTCTC 1 cut(s) 23
BsaJI CCNNGG 5 cut(s) 817, 975, 1035, 1054, 1377
BsaWI WCCGGW 2 cut(s) 25, 699
BsaXI ACNNNNNCTCC 6 cut(s) 22, 52, 132, 162, 279, 309
Bsc4I CCNNNNNNNGG 2 cut(s) 114, 284
Bse118I RCCGGY 2 cut(s) 699, 774
Bse1I ACTGG 1 cut(s) 1210
Bse8I GATNNNNATC 1 cut(s) 1284
BseAI TCCGGA 1 cut(s) 25
BseDI CCNNGG 5 cut(s) 817, 975, 1035, 1054, 1377
BseGI GGATG 3 cut(s) 125, 971, 1215
BseJI GATNNNNATC 1 cut(s) 1284
BseLI CCNNNNNNNGG 2 cut(s) 114, 284
BseMII CTCAG 3 cut(s) 390, 912, 1355
BseNI ACTGG 1 cut(s) 1210
BseRI GAGGAG 3 cut(s) 335, 530, 734
BseSI GKGCMC 1 cut(s) 1007
BseXI GCAGC 4 cut(s) 322, 748, 1060, 1253
BseYI CCCAGC 1 cut(s) 621
BshFI GGCC 4 cut(s) 84, 208, 383, 599
BshNI GGYRCC 2 cut(s) 65, 1028
BshTI ACCGGT 1 cut(s) 699
BsiHKAI GWGCWC 1 cut(s) 1007
BsiSI CCGG 5 cut(s) 26, 108, 700, 775, 1056
BslFI GGGAC 3 cut(s) 228, 372, 1037
BslI CCNNNNNNNGG 2 cut(s) 114, 284
BsmAI GTCTC 1 cut(s) 23
BsmFI GGGAC 3 cut(s) 228, 372, 1037
BsnI GGCC 4 cut(s) 84, 208, 383, 599
Bso31I GGTCTC 1 cut(s) 23
Bsp1286I GDGCHC 1 cut(s) 1007
Bsp13I TCCGGA 1 cut(s) 25
Bsp1407I TGTACA 1 cut(s) 566
Bsp143I GATC 7 cut(s) 98, 490, 508, 832, 1285, 1294, 1405
Bsp19I CCATGG 2 cut(s) 1035, 1377
BspACI CCGC 8 cut(s) 111, 123, 152, 233, 236, 299, 322, 1132
BspANI GGCC 4 cut(s) 84, 208, 383, 599
BspCNI CTCAG 3 cut(s) 391, 913, 1354
BspEI TCCGGA 1 cut(s) 25
BspLI GGNNCC 6 cut(s) 67, 207, 773, 823, 1030, 1265
BspPI GGATC 1 cut(s) 503
BspT107I GGYRCC 2 cut(s) 65, 1028
BspTNI GGTCTC 1 cut(s) 23
BsrFI RCCGGY 2 cut(s) 699, 774
BsrGI TGTACA 1 cut(s) 566
BsrI ACTGG 1 cut(s) 1210
BssAI RCCGGY 2 cut(s) 699, 774
BssECI CCNNGG 5 cut(s) 817, 975, 1035, 1054, 1377
BssMI GATC 7 cut(s) 98, 490, 508, 832, 1285, 1294, 1405
BssNI GRCGYC 3 cut(s) 54, 66, 266
BssT1I CCWWGG 3 cut(s) 975, 1035, 1377
Bst4CI ACNGT 4 cut(s) 219, 376, 586, 1002
BstACI GRCGYC 3 cut(s) 54, 66, 266
BstAPI GCANNNNNTGC 1 cut(s) 1417
BstAUI TGTACA 1 cut(s) 566
BstC8I GCNNGC 1 cut(s) 876
BstDEI CTNAG 6 cut(s) 399, 617, 921, 947, 1341, 1414
BstDSI CCRYGG 3 cut(s) 817, 1035, 1377
BstF5I GGATG 3 cut(s) 125, 971, 1215
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 2 cut(s) 68, 451
BstKTI GATC 7 cut(s) 101, 493, 511, 835, 1288, 1297, 1408
BstMAI GTCTC 1 cut(s) 23
BstMBI GATC 7 cut(s) 98, 490, 508, 832, 1285, 1294, 1405
BstMWI GCNNNNNNNGC 5 cut(s) 233, 296, 485, 875, 1417
BstSCI CCNGG 1 cut(s) 1054
BstSLI GKGCMC 1 cut(s) 1007
BstV1I GCAGC 4 cut(s) 322, 748, 1060, 1253
BstX2I RGATCY 1 cut(s) 508
BstYI RGATCY 1 cut(s) 508
BsuRI GGCC 4 cut(s) 84, 208, 383, 599
BtgI CCRYGG 3 cut(s) 817, 1035, 1377
BtgZI GCGATG 1 cut(s) 901
BtsCI GGATG 3 cut(s) 125, 971, 1215
BtsIMutI CAGTG 4 cut(s) 665, 688, 1007, 1422
Cac8I GCNNGC 1 cut(s) 876
CfoI GCGC 2 cut(s) 68, 451
Cfr10I RCCGGY 2 cut(s) 699, 774
Cfr13I GGNCC 3 cut(s) 91, 206, 658
CseI GACGC 2 cut(s) 255, 324
Csp6I GTAC 4 cut(s) 553, 567, 912, 1345
CspAI ACCGGT 1 cut(s) 699
CviAII CATG 4 cut(s) 645, 1036, 1123, 1378
CviQI GTAC 4 cut(s) 553, 567, 912, 1345
DdeI CTNAG 6 cut(s) 399, 617, 921, 947, 1341, 1414
DinI GGCGCC 1 cut(s) 67
DpnI GATC 7 cut(s) 100, 492, 510, 834, 1287, 1296, 1407
DpnII GATC 7 cut(s) 98, 490, 508, 832, 1285, 1294, 1405
DraIII CACNNNGTG 1 cut(s) 1417
EciI GGCGGA 2 cut(s) 251, 314
Eco130I CCWWGG 3 cut(s) 975, 1035, 1377
Eco31I GGTCTC 1 cut(s) 23
Eco47I GGWCC 2 cut(s) 91, 658
Eco57I CTGAAG 3 cut(s) 774, 825, 1067
EcoRI GAATTC 1 cut(s) 639
EcoT14I CCWWGG 3 cut(s) 975, 1035, 1377
EgeI GGCGCC 1 cut(s) 67
EheI GGCGCC 1 cut(s) 67
ErhI CCWWGG 3 cut(s) 975, 1035, 1377
FaeI CATG 4 cut(s) 648, 1039, 1126, 1381
FalI AAGNNNNNCTT 2 cut(s) 858, 890
FaqI GGGAC 3 cut(s) 228, 372, 1037
FatI CATG 4 cut(s) 644, 1035, 1122, 1377
FauNDI CATATG 2 cut(s) 251, 982
FbaI TGATCA 1 cut(s) 832
FblI GTMKAC 3 cut(s) 60, 221, 1387
Fnu4HI GCNGC 5 cut(s) 234, 336, 762, 1074, 1242
FokI GGATG 3 cut(s) 112, 958, 1222
Fsp4HI GCNGC 5 cut(s) 234, 336, 762, 1074, 1242
FspBI CTAG 6 cut(s) 47, 437, 690, 783, 1164, 1361
FspI TGCGCA 1 cut(s) 450
GlaI GCGC 2 cut(s) 67, 450
GluI GCNGC 5 cut(s) 234, 336, 762, 1074, 1242
GsaI CCCAGC 1 cut(s) 625
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 4 cut(s) 84, 208, 383, 599
HapII CCGG 5 cut(s) 26, 108, 700, 775, 1056
HgaI GACGC 2 cut(s) 255, 324
HhaI GCGC 2 cut(s) 68, 451
Hin1I GRCGYC 3 cut(s) 54, 66, 266
Hin1II CATG 4 cut(s) 648, 1039, 1126, 1381
Hin6I GCGC 2 cut(s) 66, 449
HinP1I GCGC 2 cut(s) 66, 449
HincII GTYRAC 3 cut(s) 73, 222, 372
HindII GTYRAC 3 cut(s) 73, 222, 372
HinfI GANTC 7 cut(s) 20, 184, 302, 360, 741, 812, 1197
HpaII CCGG 5 cut(s) 26, 108, 700, 775, 1056
HphI GGTGA 2 cut(s) 1009, 1366
Hpy188I TCNGA 7 cut(s) 201, 260, 314, 400, 805, 844, 1202
Hpy188III TCNNGA 3 cut(s) 14, 26, 512
Hpy99I CGWCG 5 cut(s) 56, 59, 226, 232, 271
HpyAV CCTTC 2 cut(s) 139, 898
HpyCH4III ACNGT 4 cut(s) 219, 376, 586, 1002
HpyCH4IV ACGT 2 cut(s) 54, 194
HpyCH4V TGCA 8 cut(s) 522, 665, 764, 878, 998, 1005, 1241, 1420
HpyF10VI GCNNNNNNNGC 5 cut(s) 233, 296, 485, 875, 1417
HpyF3I CTNAG 6 cut(s) 399, 617, 921, 947, 1341, 1414
HpySE526I ACGT 2 cut(s) 54, 194
Hsp92I GRCGYC 3 cut(s) 54, 66, 266
Hsp92II CATG 4 cut(s) 648, 1039, 1126, 1381
HspAI GCGC 2 cut(s) 66, 449
KasI GGCGCC 1 cut(s) 65
Kpn2I TCCGGA 1 cut(s) 25
Ksp22I TGATCA 1 cut(s) 832
Kzo9I GATC 7 cut(s) 98, 490, 508, 832, 1285, 1294, 1405
LmnI GCTCC 2 cut(s) 287, 1269
Lsp1109I GCAGC 4 cut(s) 322, 748, 1060, 1253
LweI GCATC 4 cut(s) 134, 570, 717, 1357
MaeI CTAG 6 cut(s) 47, 437, 690, 783, 1164, 1361
MaeII ACGT 2 cut(s) 54, 194
MaeIII GTNAC 1 cut(s) 1306
MalI GATC 7 cut(s) 100, 492, 510, 834, 1287, 1296, 1407
MboI GATC 7 cut(s) 98, 490, 508, 832, 1285, 1294, 1405
MfeI CAATTG 1 cut(s) 544
MflI RGATCY 1 cut(s) 508
MhlI GDGCHC 1 cut(s) 1007
MluCI AATT 4 cut(s) 544, 639, 848, 1311
Mly113I GGCGCC 1 cut(s) 66
MlyI GAGTC 1 cut(s) 354
MroI TCCGGA 1 cut(s) 25
MroXI GAANNNNTTC 1 cut(s) 784
MseI TTAA 1 cut(s) 767
MslI CAYNNNNRTG 3 cut(s) 1121, 1184, 1229
MspA1I CMGCKG 1 cut(s) 1073
MspI CCGG 5 cut(s) 26, 108, 700, 775, 1056
MspR9I CCNGG 1 cut(s) 1056
MunI CAATTG 1 cut(s) 544
MwoI GCNNNNNNNGC 5 cut(s) 233, 296, 485, 875, 1417
NarI GGCGCC 1 cut(s) 66
NciI CCSGG 1 cut(s) 1056
NcoI CCATGG 2 cut(s) 1035, 1377
NdeI CATATG 2 cut(s) 251, 982
NdeII GATC 7 cut(s) 98, 490, 508, 832, 1285, 1294, 1405
NlaIII CATG 4 cut(s) 648, 1039, 1126, 1381
NlaIV GGNNCC 6 cut(s) 67, 207, 773, 823, 1030, 1265
NmeAIII GCCGAG 1 cut(s) 342
NmuCI GTSAC 1 cut(s) 1306
NsbI TGCGCA 1 cut(s) 450
PdmI GAANNNNTTC 1 cut(s) 784
PfeI GAWTC 6 cut(s) 20, 184, 302, 741, 812, 1197
PflFI GACNNNGTC 2 cut(s) 53, 376
PinAI ACCGGT 1 cut(s) 699
PkrI GCNGC 5 cut(s) 235, 337, 763, 1075, 1243
PleI GAGTC 1 cut(s) 354
PluTI GGCGCC 1 cut(s) 69
PpsI GAGTC 1 cut(s) 354
Psp1406I AACGTT 1 cut(s) 194
PspFI CCCAGC 1 cut(s) 621
PspN4I GGNNCC 6 cut(s) 67, 207, 773, 823, 1030, 1265
PspPI GGNCC 3 cut(s) 91, 206, 658
PsuI RGATCY 1 cut(s) 508
PsyI GACNNNGTC 2 cut(s) 53, 376
PvuII CAGCTG 1 cut(s) 1073
RsaI GTAC 4 cut(s) 554, 568, 913, 1346
RsaNI GTAC 4 cut(s) 553, 567, 912, 1345
RseI CAYNNNNRTG 3 cut(s) 1121, 1184, 1229
SalI GTCGAC 1 cut(s) 220
SaqAI TTAA 1 cut(s) 767
SatI GCNGC 5 cut(s) 234, 336, 762, 1074, 1242
Sau3AI GATC 7 cut(s) 98, 490, 508, 832, 1285, 1294, 1405
Sau96I GGNCC 3 cut(s) 91, 206, 658
ScaI AGTACT 1 cut(s) 1346
SchI GAGTC 1 cut(s) 354
ScrFI CCNGG 1 cut(s) 1056
SduI GDGCHC 1 cut(s) 1007
SfaNI GCATC 4 cut(s) 134, 570, 717, 1357
SfoI GGCGCC 1 cut(s) 67
SinI GGWCC 2 cut(s) 91, 658
SmiMI CAYNNNNRTG 3 cut(s) 1121, 1184, 1229
SpeI ACTAGT 1 cut(s) 782
Sse9I AATT 4 cut(s) 544, 639, 848, 1311
SsiI CCGC 8 cut(s) 111, 123, 152, 233, 236, 299, 322, 1132
SspDI GGCGCC 1 cut(s) 65
SspI AATATT 1 cut(s) 411
SspMI CTAG 6 cut(s) 47, 437, 690, 783, 1164, 1361
StyD4I CCNGG 1 cut(s) 1054
StyI CCWWGG 3 cut(s) 975, 1035, 1377
TaaI ACNGT 4 cut(s) 219, 376, 586, 1002
TaiI ACGT 2 cut(s) 57, 197
TaqI TCGA 4 cut(s) 15, 182, 221, 1062
TasI AATT 4 cut(s) 544, 639, 848, 1311
TatI WGTACW 2 cut(s) 566, 1344
TauI GCSGC 1 cut(s) 236
TfiI GAWTC 6 cut(s) 20, 184, 302, 741, 812, 1197
Tru1I TTAA 1 cut(s) 767
Tru9I TTAA 1 cut(s) 767
TscAI CASTG 4 cut(s) 672, 688, 1007, 1422
TseFI GTSAC 1 cut(s) 1306
TseI GCWGC 4 cut(s) 335, 761, 1073, 1241
Tsp45I GTSAC 1 cut(s) 1306
TspDTI ATGAA 1 cut(s) 121
TspRI CASTG 4 cut(s) 672, 688, 1007, 1422
Tth111I GACNNNGTC 2 cut(s) 53, 376
VneI GTGCAC 1 cut(s) 1003
VpaK11BI GGWCC 2 cut(s) 91, 658
XapI RAATTY 1 cut(s) 639
XcmI CCANNNNNNNNNTGG 1 cut(s) 1323
XmiI GTMKAC 3 cut(s) 60, 221, 1387
XmnI GAANNNNTTC 1 cut(s) 784
XspI CTAG 6 cut(s) 47, 437, 690, 783, 1164, 1361
ZraI GACGTC 1 cut(s) 55
ZrmI AGTACT 1 cut(s) 1346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.