RLG00000001630

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000191
Physical Location & Seq
Forward (+)
18503954 .. 18506820
2867 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001630

Sequence Viewer

Length: 1659 bp
ATGGCCACTTTTCCGGAGAGCCAAACTCCACTGCTCGACGACGTTGTGGAGGGCGCCGTTGACTGCAACGGCCATCCGGTCCGCAGATCAAGTTCAGGCGGTTGGCCTTCCGCATCGTTCATAATATGGGTGGAGGTTGCGGAGAGGCTTGCGTACTATGGAATCAGCTCCAACCTTATTTCGTTTCTGACCGGGCCTCTCGGACAGTCGACGGCCACGGCTGCTGAGAACGTCAACATATGGTCCGGAACAGCGTCCTTGTTTCCTCTATTGGGGGCGTTCGTGGCAGATTCTTTTCTCGGTCGTTACCGCACCATCATTGCCGCTTCTGTCCTCTACGTCATGGGTCTTGCCTTGCTGACTGTGTCAGCCGTGCTTCCGTCTTCTCAGCTTCAAGTATTATTGTTCTTTTTCTCTCTATATTTAGTAGCAGTTGGGCAAGGCGGACACAAGCCCTGTGTTCAGGCTTTTGGAGCAGATCAGTTCGATAGACACGATCCAGAGGAGAGCAAAGCGAAAAGCTCATTTTTCAATTGGTGGTATCTTAGTATGTGTGTAGGCCCCATGATTACCTTTCCAGTATTAGCCTACATACAGGACAACCTGAGTTGGGGTCTGGGTTTTGGTCTTCCTTGCATTGTGATGGTCCTTGCACTGCTTATCTTCCTTCTTGGAACAAGAACGTACCGGTATAGTATCAAAGGGGATGAGGACAGCCCATTCGTGAGAATTGGCAAGGTGTTTGCTGTTGCATTAAGGAATTGGCGAACTACTCCTTCAGCAATAGCTTCTGAAGAGGAATCTCGTGGAACCCTGTCTCACCAAAGTTCTCAACAATTCAAATTGCTCAACAAAGCCTTGCTTGCACCGGATGATTTGAAGGAAAATGGGAAAGTGTGTACCGTCGCTGAGGTTGAAGAAGCAAAAGCCGTTCTTAGGCTGTTTCCTATATGGGTTACATGCTTGCCATATGCCATTGTGTTTGCACAGGTCTCGACTTTTTTCACTAAGCAAGGTGCCACCATGGACAGAACAATTGTGCCAGGTTTTGATATACCAGCTGCTTCACTTCAGTCGTTTATCGGCATTGCCACTATTATATTCATTCCCATTTATGATCGCATATTTGTTCCAATAGCAAGAGCTTTCACTAGAGAACCCTCTGGCATTACAATGCTACGAAGAATCGGAACTGGGATGTTTATATCCATTATTTCCATGGTAGTTGCAGCTTTAGTTGAGATGCAAAGGGTCCAAACTGCTAAAGACTATAATCTGGTTGATAAGCCAAGTGCCACAGTTCCAATGAGTGTTTGGTGGTTAAGTCCTCAGTACTTGTTAATTGGACTGGCCGATGTTTTCACAATGGTTGGTCTGCAAGAGTTCTTCTACGATCAGGTACCAAATGAATTAAGGAGCGTAGGACTTGCCCTCTACCTCAGTATATTTGGCGTGGGAAGCTTTCTGAGCAGCTTTCTTATCTCTGTTATTGAGGAAGCAACCAGTTGGGCAGGTCACACTCGCTGGTTTTCCAATAACCTCAACCGTGCACATCTTGATTACTTCTATTGGTTACTTGTAGCAGTCAATGCAGTAGGATTGGTGGTCTACATGTATTTCGCAAAATCGTACATATATAATAGGGTTAGTACAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

553

Amino Acids

61.03

Weight (kDa)

6.12

Isoelectric Point (pI)

39.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 51 - 490 1.8e-17 Major Facilitator Superfamily
PTR2 PF00854 103 - 509 2.6e-99 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1502
Acc65I GGTACC 1 cut(s) 1399
AccB1I GGYRCC 3 cut(s) 53, 1016, 1399
AccI GTMKAC 2 cut(s) 209, 1608
AccIII TCCGGA 2 cut(s) 13, 245
AciI CCGC 7 cut(s) 82, 99, 111, 140, 310, 324, 444
AclWI GGATC 1 cut(s) 491
AcoI YGGCCR 4 cut(s) 3, 70, 213, 1350
AcuI CTGAAG 3 cut(s) 762, 813, 1055
AcyI GRCGYC 1 cut(s) 54
AfaI GTAC 7 cut(s) 155, 686, 901, 1334, 1401, 1631, 1651
AfiI CCNNNNNNNGG 3 cut(s) 272, 610, 936
AflIII ACRYGT 1 cut(s) 1611
AgeI ACCGGT 1 cut(s) 687
AgsI TTSAA 5 cut(s) 395, 532, 841, 880, 917
AjnI CCWGG 1 cut(s) 1042
AluBI AGCT 9 cut(s) 168, 391, 522, 788, 1061, 1145, 1232, 1461, 1473
AluI AGCT 9 cut(s) 168, 391, 522, 788, 1061, 1145, 1232, 1461, 1473
Alw21I GWGCWC 1 cut(s) 1552
Alw26I GTCTC 2 cut(s) 822, 997
Alw44I GTGCAC 1 cut(s) 1548
AlwI GGATC 1 cut(s) 491
Aor13HI TCCGGA 2 cut(s) 13, 245
AoxI GGCC 7 cut(s) 3, 70, 104, 194, 213, 559, 1350
ApaLI GTGCAC 1 cut(s) 1548
ApeKI GCWGC 4 cut(s) 221, 1061, 1229, 1470
ArsI GACNNNNNNTTYG 2 cut(s) 704, 736
AsiGI ACCGGT 1 cut(s) 687
Asp718I GGTACC 1 cut(s) 1399
AspLEI GCGC 1 cut(s) 56
AspS9I GGNCC 6 cut(s) 79, 194, 243, 560, 646, 1252
AsuC2I CCSGG 1 cut(s) 193
AsuHPI GGTGA 1 cut(s) 812
AvaII GGWCC 4 cut(s) 79, 243, 646, 1252
BaeGI GKGCMC 1 cut(s) 1552
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 3 cut(s) 53, 1016, 1399
BauI CACGAG 1 cut(s) 804
BbsI GAAGAC 2 cut(s) 375, 620
Bbv12I GWGCWC 1 cut(s) 1552
BbvCI CCTCAGC 1 cut(s) 909
BbvI GCAGC 4 cut(s) 208, 1048, 1241, 1482
BccI CCATC 3 cut(s) 81, 323, 637
BceAI ACGGC 6 cut(s) 41, 85, 228, 234, 356, 914
BcgI CGANNNNNNTGC 2 cut(s) 975, 1009
BciT130I CCWGG 1 cut(s) 1044
BcnI CCSGG 1 cut(s) 193
BcoDI GTCTC 2 cut(s) 822, 997
BfaI CTAG 1 cut(s) 1152
BfoI RGCGCY 1 cut(s) 57
BfuAI ACCTGC 1 cut(s) 1502
BisI GCNGC 5 cut(s) 222, 324, 1062, 1230, 1471
BlsI GCNGC 5 cut(s) 223, 325, 1063, 1231, 1472
BmcAI AGTACT 1 cut(s) 1334
Bme1390I CCNGG 2 cut(s) 193, 1044
Bme18I GGWCC 4 cut(s) 79, 243, 646, 1252
BmgT120I GGNCC 6 cut(s) 79, 194, 243, 560, 646, 1252
BmiI GGNNCC 6 cut(s) 55, 562, 811, 1018, 1253, 1401
BmrFI CCNGG 2 cut(s) 193, 1044
BmrI ACTGGG 1 cut(s) 1203
BmsI GCATC 2 cut(s) 122, 1233
BmuI ACTGGG 1 cut(s) 1203
BpiI GAAGAC 2 cut(s) 375, 620
BplI GAGNNNNNCTC 2 cut(s) 10, 42
Bpu10I CCTNAGC 1 cut(s) 909
BpuMI CCSGG 1 cut(s) 193
BsaHI GRCGYC 1 cut(s) 54
BsaI GGTCTC 1 cut(s) 997
BsaJI CCNNGG 3 cut(s) 216, 1023, 1218
BsaWI WCCGGW 5 cut(s) 13, 76, 245, 687, 868
Bsc4I CCNNNNNNNGG 3 cut(s) 272, 610, 936
Bse118I RCCGGY 1 cut(s) 687
Bse1I ACTGG 4 cut(s) 578, 1198, 1353, 1503
Bse3DI GCAATG 2 cut(s) 318, 1086
BseAI TCCGGA 2 cut(s) 13, 245
BseBI CCWGG 1 cut(s) 1044
BseDI CCNNGG 3 cut(s) 216, 1023, 1218
BseGI GGATG 4 cut(s) 73, 712, 877, 1203
BseLI CCNNNNNNNGG 3 cut(s) 272, 610, 936
BseMI GCAATG 2 cut(s) 318, 1086
BseMII CTCAG 7 cut(s) 216, 401, 596, 900, 1343, 1453, 1457
BseNI ACTGG 4 cut(s) 578, 1198, 1353, 1503
BseRI GAGGAG 1 cut(s) 518
BseSI GKGCMC 1 cut(s) 1552
BseXI GCAGC 4 cut(s) 208, 1048, 1241, 1482
Bsh1285I CGRYCG 1 cut(s) 304
BshFI GGCC 7 cut(s) 5, 72, 106, 196, 215, 561, 1352
BshNI GGYRCC 3 cut(s) 53, 1016, 1399
BshTI ACCGGT 1 cut(s) 687
BsiEI CGRYCG 1 cut(s) 304
BsiHKAI GWGCWC 1 cut(s) 1552
BsiSI CCGG 6 cut(s) 14, 77, 192, 246, 688, 869
BslI CCNNNNNNNGG 3 cut(s) 272, 610, 936
BsmAI GTCTC 2 cut(s) 822, 997
BsnI GGCC 7 cut(s) 5, 72, 106, 196, 215, 561, 1352
Bso31I GGTCTC 1 cut(s) 997
Bsp1286I GDGCHC 1 cut(s) 1552
Bsp13I TCCGGA 2 cut(s) 13, 245
Bsp143I GATC 5 cut(s) 86, 478, 496, 1117, 1393
Bsp19I CCATGG 2 cut(s) 1023, 1218
BspACI CCGC 7 cut(s) 82, 99, 111, 140, 310, 324, 444
BspANI GGCC 7 cut(s) 5, 72, 106, 196, 215, 561, 1352
BspCNI CTCAG 7 cut(s) 217, 400, 597, 901, 1342, 1452, 1458
BspEI TCCGGA 2 cut(s) 13, 245
BspLI GGNNCC 6 cut(s) 55, 562, 811, 1018, 1253, 1401
BspMI ACCTGC 1 cut(s) 1502
BspPI GGATC 1 cut(s) 491
BspT107I GGYRCC 3 cut(s) 53, 1016, 1399
BspTNI GGTCTC 1 cut(s) 997
BsrDI GCAATG 2 cut(s) 318, 1086
BsrFI RCCGGY 1 cut(s) 687
BsrI ACTGG 4 cut(s) 578, 1198, 1353, 1503
BssAI RCCGGY 1 cut(s) 687
BssECI CCNNGG 3 cut(s) 216, 1023, 1218
BssMI GATC 5 cut(s) 86, 478, 496, 1117, 1393
BssNI GRCGYC 1 cut(s) 54
BssSI CACGAG 1 cut(s) 804
BssT1I CCWWGG 2 cut(s) 1023, 1218
Bst2BI CACGAG 1 cut(s) 804
Bst2UI CCWGG 1 cut(s) 1044
Bst4CI ACNGT 5 cut(s) 207, 364, 904, 1300, 1547
Bst6I CTCTTC 1 cut(s) 789
BstACI GRCGYC 1 cut(s) 54
BstAPI GCANNNNNTGC 1 cut(s) 1589
BstC8I GCNNGC 3 cut(s) 150, 864, 965
BstDSI CCRYGG 3 cut(s) 216, 1023, 1218
BstF5I GGATG 4 cut(s) 73, 712, 877, 1203
BstH2I RGCGCY 1 cut(s) 57
BstHHI GCGC 1 cut(s) 56
BstKTI GATC 5 cut(s) 89, 481, 499, 1120, 1396
BstMAI GTCTC 2 cut(s) 822, 997
BstMBI GATC 5 cut(s) 86, 478, 496, 1117, 1393
BstMCI CGRYCG 1 cut(s) 304
BstMWI GCNNNNNNNGC 7 cut(s) 221, 284, 473, 863, 1458, 1467, 1589
BstNI CCWGG 1 cut(s) 1044
BstNSI RCATGY 2 cut(s) 963, 1615
BstSCI CCNGG 2 cut(s) 191, 1042
BstSLI GKGCMC 1 cut(s) 1552
BstV1I GCAGC 4 cut(s) 208, 1048, 1241, 1482
BstV2I GAAGAC 2 cut(s) 375, 620
BsuRI GGCC 7 cut(s) 5, 72, 106, 196, 215, 561, 1352
BtgI CCRYGG 3 cut(s) 216, 1023, 1218
BtsCI GGATG 4 cut(s) 73, 712, 877, 1203
BtsI GCAGTG 2 cut(s) 29, 653
BtsIMutI CAGTG 2 cut(s) 29, 653
BveI ACCTGC 1 cut(s) 1502
Cac8I GCNNGC 3 cut(s) 150, 864, 965
CfoI GCGC 1 cut(s) 56
Cfr10I RCCGGY 1 cut(s) 687
Cfr13I GGNCC 6 cut(s) 79, 194, 243, 560, 646, 1252
CpoI CGGWCCG 1 cut(s) 79
CseI GACGC 1 cut(s) 243
Csp6I GTAC 7 cut(s) 154, 685, 900, 1333, 1400, 1630, 1650
CspAI ACCGGT 1 cut(s) 687
CspI CGGWCCG 1 cut(s) 79
CviAII CATG 6 cut(s) 343, 565, 960, 1024, 1219, 1612
CviQI GTAC 7 cut(s) 154, 685, 900, 1333, 1400, 1630, 1650
DinI GGCGCC 1 cut(s) 55
DpnI GATC 5 cut(s) 88, 480, 498, 1119, 1395
DpnII GATC 5 cut(s) 86, 478, 496, 1117, 1393
EaeI YGGCCR 4 cut(s) 3, 70, 213, 1350
Eam1104I CTCTTC 1 cut(s) 789
EarI CTCTTC 1 cut(s) 789
EciI GGCGGA 1 cut(s) 459
Eco130I CCWWGG 2 cut(s) 1023, 1218
Eco31I GGTCTC 1 cut(s) 997
Eco47I GGWCC 4 cut(s) 79, 243, 646, 1252
Eco57I CTGAAG 3 cut(s) 762, 813, 1055
EcoO109I RGGNCCY 1 cut(s) 560
EcoRII CCWGG 1 cut(s) 1042
EcoT14I CCWWGG 2 cut(s) 1023, 1218
EgeI GGCGCC 1 cut(s) 55
EheI GGCGCC 1 cut(s) 55
ErhI CCWWGG 2 cut(s) 1023, 1218
FaeI CATG 6 cut(s) 346, 568, 963, 1027, 1222, 1615
FalI AAGNNNNNCTT 4 cut(s) 846, 878, 918, 950
FatI CATG 6 cut(s) 342, 564, 959, 1023, 1218, 1611
FauNDI CATATG 2 cut(s) 239, 970
FblI GTMKAC 2 cut(s) 209, 1608
Fnu4HI GCNGC 5 cut(s) 222, 324, 1062, 1230, 1471
FokI GGATG 4 cut(s) 60, 719, 884, 1210
Fsp4HI GCNGC 5 cut(s) 222, 324, 1062, 1230, 1471
FspBI CTAG 1 cut(s) 1152
GlaI GCGC 1 cut(s) 55
GluI GCNGC 5 cut(s) 222, 324, 1062, 1230, 1471
HaeII RGCGCY 1 cut(s) 57
HaeIII GGCC 7 cut(s) 5, 72, 106, 196, 215, 561, 1352
HapII CCGG 6 cut(s) 14, 77, 192, 246, 688, 869
HgaI GACGC 1 cut(s) 243
HhaI GCGC 1 cut(s) 56
Hin1I GRCGYC 1 cut(s) 54
Hin1II CATG 6 cut(s) 346, 568, 963, 1027, 1222, 1615
Hin6I GCGC 1 cut(s) 54
HinP1I GCGC 1 cut(s) 54
HincII GTYRAC 3 cut(s) 61, 210, 235
HindII GTYRAC 3 cut(s) 61, 210, 235
HindIII AAGCTT 1 cut(s) 1459
HinfI GANTC 4 cut(s) 162, 290, 800, 1185
HpaII CCGG 6 cut(s) 14, 77, 192, 246, 688, 869
HphI GGTGA 1 cut(s) 812
Hpy166II GTNNAC 6 cut(s) 61, 210, 235, 900, 1550, 1609
Hpy188I TCNGA 5 cut(s) 189, 203, 793, 1190, 1467
Hpy188III TCNNGA 6 cut(s) 14, 246, 500, 724, 994, 1556
Hpy8I GTNNAC 6 cut(s) 61, 210, 235, 900, 1550, 1609
Hpy99I CGWCG 4 cut(s) 41, 44, 214, 908
HpyAV CCTTC 4 cut(s) 117, 677, 786, 874
HpyCH4III ACNGT 5 cut(s) 207, 364, 904, 1300, 1547
HpyCH4IV ACGT 4 cut(s) 42, 231, 339, 683
HpyF10VI GCNNNNNNNGC 7 cut(s) 221, 284, 473, 863, 1458, 1467, 1589
HpySE526I ACGT 4 cut(s) 42, 231, 339, 683
Hsp92I GRCGYC 1 cut(s) 54
Hsp92II CATG 6 cut(s) 346, 568, 963, 1027, 1222, 1615
HspAI GCGC 1 cut(s) 54
KasI GGCGCC 1 cut(s) 53
Kpn2I TCCGGA 2 cut(s) 13, 245
KpnI GGTACC 1 cut(s) 1403
Kzo9I GATC 5 cut(s) 86, 478, 496, 1117, 1393
LmnI GCTCC 3 cut(s) 173, 473, 1416
Lsp1109I GCAGC 4 cut(s) 208, 1048, 1241, 1482
LweI GCATC 2 cut(s) 122, 1233
MaeI CTAG 1 cut(s) 1152
MaeII ACGT 4 cut(s) 42, 231, 339, 683
MaeIII GTNAC 4 cut(s) 305, 955, 1514, 1572
MalI GATC 5 cut(s) 88, 480, 498, 1119, 1395
MboI GATC 5 cut(s) 86, 478, 496, 1117, 1393
MboII GAAGA 7 cut(s) 375, 620, 655, 806, 929, 1194, 1378
MfeI CAATTG 2 cut(s) 532, 1035
MhlI GDGCHC 1 cut(s) 1552
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 8 cut(s) 532, 729, 760, 836, 842, 1035, 1341, 1409
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 54
MmeI TCCRAC 1 cut(s) 195
Mox20I TGGCCA 1 cut(s) 5
MroI TCCGGA 2 cut(s) 13, 245
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 755, 1322, 1340, 1412
MslI CAYNNNNRTG 2 cut(s) 641, 1172
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 1061
MspI CCGG 6 cut(s) 14, 77, 192, 246, 688, 869
MspR9I CCNGG 2 cut(s) 193, 1044
MunI CAATTG 2 cut(s) 532, 1035
MvaI CCWGG 1 cut(s) 1044
MwoI GCNNNNNNNGC 7 cut(s) 221, 284, 473, 863, 1458, 1467, 1589
NarI GGCGCC 1 cut(s) 54
NciI CCSGG 1 cut(s) 193
NcoI CCATGG 2 cut(s) 1023, 1218
NdeI CATATG 2 cut(s) 239, 970
NdeII GATC 5 cut(s) 86, 478, 496, 1117, 1393
NlaIII CATG 6 cut(s) 346, 568, 963, 1027, 1222, 1615
NlaIV GGNNCC 6 cut(s) 55, 562, 811, 1018, 1253, 1401
NmuCI GTSAC 1 cut(s) 1514
NspI RCATGY 2 cut(s) 963, 1615
PciI ACATGT 1 cut(s) 1611
PcsI WCGNNNNNNNCGW 1 cut(s) 492
PfeI GAWTC 4 cut(s) 162, 290, 800, 1185
PflFI GACNNNGTC 1 cut(s) 364
PinAI ACCGGT 1 cut(s) 687
PkrI GCNGC 5 cut(s) 223, 325, 1063, 1231, 1472
PluTI GGCGCC 1 cut(s) 57
PscI ACATGT 1 cut(s) 1611
Psp6I CCWGG 1 cut(s) 1042
PspGI CCWGG 1 cut(s) 1042
PspN4I GGNNCC 6 cut(s) 55, 562, 811, 1018, 1253, 1401
PspPI GGNCC 6 cut(s) 79, 194, 243, 560, 646, 1252
PsyI GACNNNGTC 1 cut(s) 364
PvuII CAGCTG 1 cut(s) 1061
RsaI GTAC 7 cut(s) 155, 686, 901, 1334, 1401, 1631, 1651
RsaNI GTAC 7 cut(s) 154, 685, 900, 1333, 1400, 1630, 1650
RseI CAYNNNNRTG 2 cut(s) 641, 1172
Rsr2I CGGWCCG 1 cut(s) 79
RsrII CGGWCCG 1 cut(s) 79
SalI GTCGAC 1 cut(s) 208
SaqAI TTAA 4 cut(s) 755, 1322, 1340, 1412
SatI GCNGC 5 cut(s) 222, 324, 1062, 1230, 1471
Sau3AI GATC 5 cut(s) 86, 478, 496, 1117, 1393
Sau96I GGNCC 6 cut(s) 79, 194, 243, 560, 646, 1252
ScaI AGTACT 1 cut(s) 1334
ScrFI CCNGG 2 cut(s) 193, 1044
SduI GDGCHC 1 cut(s) 1552
SfaNI GCATC 2 cut(s) 122, 1233
SfoI GGCGCC 1 cut(s) 55
SinI GGWCC 4 cut(s) 79, 243, 646, 1252
SmiMI CAYNNNNRTG 2 cut(s) 641, 1172
Sse9I AATT 8 cut(s) 532, 729, 760, 836, 842, 1035, 1341, 1409
SsiI CCGC 7 cut(s) 82, 99, 111, 140, 310, 324, 444
SspDI GGCGCC 1 cut(s) 53
SspMI CTAG 1 cut(s) 1152
StyD4I CCNGG 2 cut(s) 191, 1042
StyI CCWWGG 2 cut(s) 1023, 1218
TaaI ACNGT 5 cut(s) 207, 364, 904, 1300, 1547
TaiI ACGT 4 cut(s) 45, 234, 342, 686
TaqI TCGA 4 cut(s) 36, 209, 486, 995
TaqII GACCGA 1 cut(s) 290
TasI AATT 8 cut(s) 532, 729, 760, 836, 842, 1035, 1341, 1409
TatI WGTACW 2 cut(s) 1332, 1649
TauI GCSGC 1 cut(s) 326
TfiI GAWTC 4 cut(s) 162, 290, 800, 1185
Tru1I TTAA 4 cut(s) 755, 1322, 1340, 1412
Tru9I TTAA 4 cut(s) 755, 1322, 1340, 1412
TscAI CASTG 2 cut(s) 36, 660
TseFI GTSAC 1 cut(s) 1514
TseI GCWGC 4 cut(s) 221, 1061, 1229, 1470
Tsp45I GTSAC 1 cut(s) 1514
TspDTI ATGAA 3 cut(s) 109, 1093, 1422
TspGWI ACGGA 1 cut(s) 369
TspRI CASTG 2 cut(s) 36, 660
Tth111I GACNNNGTC 1 cut(s) 364
VneI GTGCAC 1 cut(s) 1548
VpaK11BI GGWCC 4 cut(s) 79, 243, 646, 1252
XceI RCATGY 2 cut(s) 963, 1615
XcmI CCANNNNNNNNNTGG 2 cut(s) 1216, 1311
XmiI GTMKAC 2 cut(s) 209, 1608
XspI CTAG 1 cut(s) 1152
ZrmI AGTACT 1 cut(s) 1334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.