RchiOBHm_Chr7g0227801

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000191
Physical Location & Seq
Reverse (-)
51053256 .. 51056923
3668 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20404

Sequence Viewer

Length: 1671 bp
ATGGCTACTTCTCTCCAAGAATCTCCGGAGACCCGAACTCCACTCCTAGACGACGTCGTAGACGGCGCCGTTGACTACAAAGGCCATCAGGTCCGCAGATCCACCTCAGGCGGTTGGCGTTCCGCTTCCTTCATGATAGGTGTGGAAGTTGCGGAGAGTTTCGCGTACTATGGGATTAGCTCCAATCTGATAACATTTCTGACGGGGCCGTTGGGAGAGTCGACGGTGACGGCGGCGGAGAATGTGAACATATGGTCCGGAACGGCGCAGTTGCTTCCTCTGTTGGGAGCATTCGTGGCGGATTCTTTTCTGGGTCGCTATCGCACCATTATTGTTGCTTCTCTCCTCTACATTTTGGGACTCGGCTTGTTGACCATATCGGCCTTGCTTACTTCTTCTGAGCTTCAAATAGTGTTATTCTTCTTCTCTCTATATCTAGTAGCAGTTGCGCAAGGTGGACATAAGCCCTGTGTTCAGGCTTTCGGGGCAGATCAGTTTGATGGACAAGATCCAGAGGAGTGCAAAGCGAAAAGCTCATTCTTCAATTGGTGGTACTTTGGTATGAATGCAGGCATAATATTGACATTCTCAGTATTGATCTACATACAGGACAATCTAAGCTGGGGTCTGGGTTTTGGAATTCCTTGTGTTGTGATGGTCCTTGCACTGATTATTTTTGTCAGTGGAACTAGGACATACCGATATAGCATCAAAGGGGAGGAGGAAAGCCCATTTGTGAGAATCGGCAAGGTTTTTGTTGCTGCATTAAGGAACCGGCGAACTAGTCCTTCTGCAATAGCTTCTGAAGAGGAATCCCGTGGAACCTTGCCTGATCAAAGTTCTGAACAATTCAAGTTCCTCAACAAAGCCTTGCTTGCACCAGATAATTTGAAAAAAAATGGGAAGGTGTGTACCATCGCTGAGGTTGAGGAAGCAAAGGCTGTTCTGAGGCTGTTTCCAATATGGGCTACATGCTTGGCATATTCTATTGTATGTGCACAGTCCAGTACTTTCTTCACCAAGCAAGGTGCTACCATGGACAGAACTATTGTGCCCGGTTTTGACATACCAGCTGCTTCACTTCAATCATTTATCTGCCTTGCCATAATGATGATCATACCCATTTATGACCGCATTTTAGTTCCAATGGCAAGAGCTATCACCAGAGAACCCTCTGGCATTACAATGCTACAAAGAATCGGAACTGGTATGTTTTTCAATATGATGACTATGGTCGTTGCAGCTTTAGTTGAGATGAAAAGGCTTCAGACCGCCAAAGATTATGATCTGGTTGATCTGCCAAGTGCCACAATTCCAATGAGTATTTGGTGGTTGGTTCCTCAGTACTTTTTGTATGGACTGGCTGATGTTTTCACCATTGTTGGTCTACAAGAGTTCTTCTACGATCAGGTACCAAATGAATTAAGAAGCATAGGACTCGCCCTCTACCTCAGTATATTGGGTGTGGGAAACTTTCTGAGCAGCTTTCTTATCTCTATTATTGAGGAAGTAACCAGTTGGGCAGGCCACACTAGCTGGTTTTCTGACAACCTTAATCTTGCACATCTTGATTACTTTTACTGGTTACTAGCAGCACTCAGTGCAGTAGGATTGTTGGCCTACATGTATTTTGCAAAATCTTACATTTATAATCGGGCTAGTACAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

556

Amino Acids

61.46

Weight (kDa)

5.25

Isoelectric Point (pI)

43.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 55 - 494 2.6e-09 Major Facilitator Superfamily
PTR2 PF00854 107 - 513 4.3e-97 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1650
AatII GACGTC 1 cut(s) 57
Acc16I TGCGCA 1 cut(s) 450
Acc65I GGTACC 1 cut(s) 1411
AccB1I GGYRCC 2 cut(s) 65, 1411
AccI GTMKAC 3 cut(s) 60, 221, 1387
AccII CGCG 1 cut(s) 164
AccIII TCCGGA 2 cut(s) 25, 257
AciI CCGC 9 cut(s) 94, 111, 123, 152, 233, 236, 299, 1132, 1272
AclWI GGATC 2 cut(s) 93, 503
AcsI RAATTY 1 cut(s) 639
AcuI CTGAAG 2 cut(s) 825, 1250
AcyI GRCGYC 2 cut(s) 54, 66
AdeI CACNNNGTG 1 cut(s) 1601
AfaI GTAC 7 cut(s) 167, 554, 913, 1009, 1346, 1413, 1663
AfiI CCNNNNNNNGG 1 cut(s) 284
AflIII ACRYGT 1 cut(s) 1623
AgsI TTSAA 6 cut(s) 407, 544, 853, 892, 1085, 1219
AhlI ACTAGT 1 cut(s) 782
AloI GAACNNNNNNTCC 2 cut(s) 239, 271
Alw21I GWGCWC 1 cut(s) 1000
Alw26I GTCTC 1 cut(s) 23
Alw44I GTGCAC 1 cut(s) 996
AlwI GGATC 2 cut(s) 93, 503
Aor13HI TCCGGA 2 cut(s) 25, 257
AoxI GGCC 5 cut(s) 82, 206, 381, 1525, 1617
ApaLI GTGCAC 1 cut(s) 996
ApeKI GCWGC 5 cut(s) 761, 1073, 1241, 1482, 1592
ApoI RAATTY 1 cut(s) 639
Asp718I GGTACC 1 cut(s) 1411
AspLEI GCGC 3 cut(s) 68, 268, 451
AspS9I GGNCC 4 cut(s) 91, 206, 255, 658
AsuC2I CCSGG 1 cut(s) 1056
AsuHPI GGTGA 4 cut(s) 238, 1009, 1153, 1366
AvaII GGWCC 3 cut(s) 91, 255, 658
AxyI CCTNAGG 1 cut(s) 106
BaeGI GKGCMC 2 cut(s) 1000, 1056
BaeI ACNNNNGTAYC 2 cut(s) 544, 577
BanI GGYRCC 2 cut(s) 65, 1411
Bbv12I GWGCWC 1 cut(s) 1000
BbvCI CCTCAGC 1 cut(s) 921
BbvI GCAGC 5 cut(s) 748, 1060, 1253, 1494, 1604
BccI CCATC 4 cut(s) 93, 494, 649, 923
BceAI ACGGC 5 cut(s) 53, 79, 193, 246, 279
BcgI CGANNNNNNTGC 2 cut(s) 1420, 1454
BclI TGATCA 2 cut(s) 832, 1113
BcnI CCSGG 1 cut(s) 1056
BcoDI GTCTC 1 cut(s) 23
BcuI ACTAGT 1 cut(s) 782
BfaI CTAG 7 cut(s) 47, 437, 690, 783, 1533, 1589, 1659
BfoI RGCGCY 1 cut(s) 69
BisI GCNGC 6 cut(s) 234, 762, 1074, 1242, 1483, 1593
BlsI GCNGC 6 cut(s) 235, 763, 1075, 1243, 1484, 1594
BmcAI AGTACT 2 cut(s) 1009, 1346
Bme1390I CCNGG 1 cut(s) 1056
Bme18I GGWCC 3 cut(s) 91, 255, 658
BmgT120I GGNCC 4 cut(s) 91, 206, 255, 658
BmiI GGNNCC 6 cut(s) 67, 207, 773, 823, 1338, 1413
BmrFI CCNGG 1 cut(s) 1056
BmsI GCATC 1 cut(s) 717
BoxI GACNNNNGTC 1 cut(s) 1232
Bpu10I CCTNAGC 1 cut(s) 921
BpuMI CCSGG 1 cut(s) 1056
BsaBI GATNNNNATC 1 cut(s) 1284
BsaHI GRCGYC 2 cut(s) 54, 66
BsaI GGTCTC 1 cut(s) 23
BsaJI CCNNGG 2 cut(s) 817, 1035
BsaWI WCCGGW 2 cut(s) 25, 257
BsaXI ACNNNNNCTCC 4 cut(s) 22, 52, 279, 309
Bsc4I CCNNNNNNNGG 1 cut(s) 284
Bse118I RCCGGY 1 cut(s) 774
Bse1I ACTGG 5 cut(s) 1005, 1210, 1365, 1515, 1586
Bse21I CCTNAGG 1 cut(s) 106
Bse8I GATNNNNATC 1 cut(s) 1284
BseAI TCCGGA 2 cut(s) 25, 257
BseDI CCNNGG 2 cut(s) 817, 1035
BseJI GATNNNNATC 1 cut(s) 1284
BseLI CCNNNNNNNGG 1 cut(s) 284
BseMII CTCAG 9 cut(s) 120, 390, 603, 912, 938, 1355, 1465, 1469, 1612
BseNI ACTGG 5 cut(s) 1005, 1210, 1365, 1515, 1586
BseRI GAGGAG 3 cut(s) 335, 530, 734
BseSI GKGCMC 2 cut(s) 1000, 1056
BseXI GCAGC 5 cut(s) 748, 1060, 1253, 1494, 1604
BseYI CCCAGC 1 cut(s) 621
BsgI GTGCAG 1 cut(s) 1623
Bsh1236I CGCG 1 cut(s) 164
BshFI GGCC 5 cut(s) 84, 208, 383, 1527, 1619
BshNI GGYRCC 2 cut(s) 65, 1411
BsiHKAI GWGCWC 1 cut(s) 1000
BsiSI CCGG 4 cut(s) 26, 258, 775, 1056
BslFI GGGAC 1 cut(s) 372
BslI CCNNNNNNNGG 1 cut(s) 284
BsmAI GTCTC 1 cut(s) 23
BsmFI GGGAC 1 cut(s) 372
BsmI GAATGC 2 cut(s) 290, 571
BsnI GGCC 5 cut(s) 84, 208, 383, 1527, 1619
Bso31I GGTCTC 1 cut(s) 23
Bsp1286I GDGCHC 2 cut(s) 1000, 1056
Bsp13I TCCGGA 2 cut(s) 25, 257
Bsp143I GATC 9 cut(s) 98, 490, 508, 597, 832, 1113, 1285, 1294, 1405
Bsp19I CCATGG 1 cut(s) 1035
BspACI CCGC 9 cut(s) 94, 111, 123, 152, 233, 236, 299, 1132, 1272
BspANI GGCC 5 cut(s) 84, 208, 383, 1527, 1619
BspCNI CTCAG 9 cut(s) 119, 391, 602, 913, 939, 1354, 1464, 1470, 1611
BspEI TCCGGA 2 cut(s) 25, 257
BspFNI CGCG 1 cut(s) 164
BspHI TCATGA 1 cut(s) 132
BspLI GGNNCC 6 cut(s) 67, 207, 773, 823, 1338, 1413
BspPI GGATC 2 cut(s) 93, 503
BspT107I GGYRCC 2 cut(s) 65, 1411
BspTNI GGTCTC 1 cut(s) 23
BsrFI RCCGGY 1 cut(s) 774
BsrI ACTGG 5 cut(s) 1005, 1210, 1365, 1515, 1586
BssAI RCCGGY 1 cut(s) 774
BssECI CCNNGG 2 cut(s) 817, 1035
BssMI GATC 9 cut(s) 98, 490, 508, 597, 832, 1113, 1285, 1294, 1405
BssNI GRCGYC 2 cut(s) 54, 66
BssT1I CCWWGG 1 cut(s) 1035
Bst4CI ACNGT 2 cut(s) 226, 1002
Bst6I CTCTTC 1 cut(s) 801
BstACI GRCGYC 2 cut(s) 54, 66
BstAPI GCANNNNNTGC 1 cut(s) 1601
BstC8I GCNNGC 3 cut(s) 571, 876, 1525
BstDSI CCRYGG 2 cut(s) 817, 1035
BstFNI CGCG 1 cut(s) 164
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 3 cut(s) 68, 268, 451
BstKTI GATC 9 cut(s) 101, 493, 511, 600, 835, 1116, 1288, 1297, 1408
BstMAI GTCTC 1 cut(s) 23
BstMBI GATC 9 cut(s) 98, 490, 508, 597, 832, 1113, 1285, 1294, 1405
BstMWI GCNNNNNNNGC 5 cut(s) 296, 485, 875, 1533, 1601
BstNSI RCATGY 2 cut(s) 975, 1627
BstPAI GACNNNNGTC 1 cut(s) 1232
BstSCI CCNGG 1 cut(s) 1054
BstSLI GKGCMC 2 cut(s) 1000, 1056
BstUI CGCG 1 cut(s) 164
BstV1I GCAGC 5 cut(s) 748, 1060, 1253, 1494, 1604
BstX2I RGATCY 2 cut(s) 98, 508
BstYI RGATCY 2 cut(s) 98, 508
Bsu36I CCTNAGG 1 cut(s) 106
BsuRI GGCC 5 cut(s) 84, 208, 383, 1527, 1619
BtgI CCRYGG 2 cut(s) 817, 1035
BtgZI GCGATG 1 cut(s) 901
BtsIMutI CAGTG 3 cut(s) 665, 688, 1606
Cac8I GCNNGC 3 cut(s) 571, 876, 1525
CciI TCATGA 1 cut(s) 132
CfoI GCGC 3 cut(s) 68, 268, 451
Cfr10I RCCGGY 1 cut(s) 774
Cfr13I GGNCC 4 cut(s) 91, 206, 255, 658
Csp6I GTAC 7 cut(s) 166, 553, 912, 1008, 1345, 1412, 1662
CviAII CATG 4 cut(s) 133, 972, 1036, 1624
CviQI GTAC 7 cut(s) 166, 553, 912, 1008, 1345, 1412, 1662
DinI GGCGCC 1 cut(s) 67
DpnI GATC 9 cut(s) 100, 492, 510, 599, 834, 1115, 1287, 1296, 1407
DpnII GATC 9 cut(s) 98, 490, 508, 597, 832, 1113, 1285, 1294, 1405
DraIII CACNNNGTG 1 cut(s) 1601
Eam1104I CTCTTC 1 cut(s) 801
EarI CTCTTC 1 cut(s) 801
EciI GGCGGA 2 cut(s) 251, 314
Eco130I CCWWGG 1 cut(s) 1035
Eco31I GGTCTC 1 cut(s) 23
Eco47I GGWCC 3 cut(s) 91, 255, 658
Eco57I CTGAAG 2 cut(s) 825, 1250
Eco81I CCTNAGG 1 cut(s) 106
EcoRI GAATTC 1 cut(s) 639
EcoT14I CCWWGG 1 cut(s) 1035
EgeI GGCGCC 1 cut(s) 67
EheI GGCGCC 1 cut(s) 67
ErhI CCWWGG 1 cut(s) 1035
FaeI CATG 4 cut(s) 136, 975, 1039, 1627
FalI AAGNNNNNCTT 2 cut(s) 858, 890
FaqI GGGAC 1 cut(s) 372
FatI CATG 4 cut(s) 132, 971, 1035, 1623
FauNDI CATATG 1 cut(s) 251
FbaI TGATCA 2 cut(s) 832, 1113
FblI GTMKAC 3 cut(s) 60, 221, 1387
Fnu4HI GCNGC 6 cut(s) 234, 762, 1074, 1242, 1483, 1593
Fsp4HI GCNGC 6 cut(s) 234, 762, 1074, 1242, 1483, 1593
FspBI CTAG 7 cut(s) 47, 437, 690, 783, 1533, 1589, 1659
FspI TGCGCA 1 cut(s) 450
GlaI GCGC 3 cut(s) 67, 267, 450
GluI GCNGC 6 cut(s) 234, 762, 1074, 1242, 1483, 1593
GsaI CCCAGC 1 cut(s) 625
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 5 cut(s) 84, 208, 383, 1527, 1619
HapII CCGG 4 cut(s) 26, 258, 775, 1056
HhaI GCGC 3 cut(s) 68, 268, 451
Hin1I GRCGYC 2 cut(s) 54, 66
Hin1II CATG 4 cut(s) 136, 975, 1039, 1627
Hin6I GCGC 3 cut(s) 66, 266, 449
HinP1I GCGC 3 cut(s) 66, 266, 449
HincII GTYRAC 3 cut(s) 73, 222, 372
HindII GTYRAC 3 cut(s) 73, 222, 372
HinfI GANTC 8 cut(s) 20, 218, 302, 360, 741, 812, 1197, 1437
HpaII CCGG 4 cut(s) 26, 258, 775, 1056
HphI GGTGA 4 cut(s) 238, 1009, 1153, 1366
Hpy166II GTNNAC 9 cut(s) 61, 73, 222, 247, 372, 458, 912, 998, 1388
Hpy188III TCNNGA 5 cut(s) 26, 133, 258, 512, 1568
Hpy8I GTNNAC 9 cut(s) 61, 73, 222, 247, 372, 458, 912, 998, 1388
Hpy99I CGWCG 3 cut(s) 56, 59, 226
HpyAV CCTTC 3 cut(s) 139, 798, 898
HpyCH4III ACNGT 2 cut(s) 226, 1002
HpyCH4IV ACGT 1 cut(s) 54
HpyF10VI GCNNNNNNNGC 5 cut(s) 296, 485, 875, 1533, 1601
HpySE526I ACGT 1 cut(s) 54
Hsp92I GRCGYC 2 cut(s) 54, 66
Hsp92II CATG 4 cut(s) 136, 975, 1039, 1627
HspAI GCGC 3 cut(s) 66, 266, 449
KasI GGCGCC 1 cut(s) 65
Kpn2I TCCGGA 2 cut(s) 25, 257
KpnI GGTACC 1 cut(s) 1415
Ksp22I TGATCA 2 cut(s) 832, 1113
Kzo9I GATC 9 cut(s) 98, 490, 508, 597, 832, 1113, 1285, 1294, 1405
LmnI GCTCC 2 cut(s) 185, 287
Lsp1109I GCAGC 5 cut(s) 748, 1060, 1253, 1494, 1604
LweI GCATC 1 cut(s) 717
MaeI CTAG 7 cut(s) 47, 437, 690, 783, 1533, 1589, 1659
MaeII ACGT 1 cut(s) 54
MaeIII GTNAC 3 cut(s) 226, 1510, 1584
MalI GATC 9 cut(s) 100, 492, 510, 599, 834, 1115, 1287, 1296, 1407
MboI GATC 9 cut(s) 98, 490, 508, 597, 832, 1113, 1285, 1294, 1405
MboII GAAGA 7 cut(s) 387, 412, 415, 532, 818, 1006, 1390
MfeI CAATTG 1 cut(s) 544
MflI RGATCY 2 cut(s) 98, 508
MhlI GDGCHC 2 cut(s) 1000, 1056
MluCI AATT 6 cut(s) 544, 639, 848, 886, 1311, 1421
Mly113I GGCGCC 1 cut(s) 66
MlyI GAGTC 3 cut(s) 227, 354, 1431
MroI TCCGGA 2 cut(s) 25, 257
MseI TTAA 3 cut(s) 767, 1424, 1554
MslI CAYNNNNRTG 2 cut(s) 1109, 1184
MspA1I CMGCKG 1 cut(s) 1073
MspI CCGG 4 cut(s) 26, 258, 775, 1056
MspR9I CCNGG 1 cut(s) 1056
MunI CAATTG 1 cut(s) 544
Mva1269I GAATGC 2 cut(s) 290, 571
MvnI CGCG 1 cut(s) 164
MwoI GCNNNNNNNGC 5 cut(s) 296, 485, 875, 1533, 1601
NarI GGCGCC 1 cut(s) 66
NciI CCSGG 1 cut(s) 1056
NcoI CCATGG 1 cut(s) 1035
NdeI CATATG 1 cut(s) 251
NdeII GATC 9 cut(s) 98, 490, 508, 597, 832, 1113, 1285, 1294, 1405
NlaIII CATG 4 cut(s) 136, 975, 1039, 1627
NlaIV GGNNCC 6 cut(s) 67, 207, 773, 823, 1338, 1413
NmeAIII GCCGAG 1 cut(s) 342
NmuCI GTSAC 1 cut(s) 226
NsbI TGCGCA 1 cut(s) 450
NspI RCATGY 2 cut(s) 975, 1627
PagI TCATGA 1 cut(s) 132
PciI ACATGT 1 cut(s) 1623
PctI GAATGC 2 cut(s) 290, 571
PfeI GAWTC 5 cut(s) 20, 302, 741, 812, 1197
PflFI GACNNNGTC 1 cut(s) 53
PkrI GCNGC 6 cut(s) 235, 763, 1075, 1243, 1484, 1594
PleI GAGTC 3 cut(s) 226, 354, 1431
PluTI GGCGCC 1 cut(s) 69
PpsI GAGTC 3 cut(s) 226, 354, 1431
PscI ACATGT 1 cut(s) 1623
PshAI GACNNNNGTC 1 cut(s) 1232
PsiI TTATAA 1 cut(s) 1650
PspFI CCCAGC 1 cut(s) 621
PspN4I GGNNCC 6 cut(s) 67, 207, 773, 823, 1338, 1413
PspPI GGNCC 4 cut(s) 91, 206, 255, 658
PsuI RGATCY 2 cut(s) 98, 508
PsyI GACNNNGTC 1 cut(s) 53
PvuII CAGCTG 1 cut(s) 1073
RsaI GTAC 7 cut(s) 167, 554, 913, 1009, 1346, 1413, 1663
RsaNI GTAC 7 cut(s) 166, 553, 912, 1008, 1345, 1412, 1662
RseI CAYNNNNRTG 2 cut(s) 1109, 1184
SalI GTCGAC 1 cut(s) 220
SaqAI TTAA 3 cut(s) 767, 1424, 1554
SatI GCNGC 6 cut(s) 234, 762, 1074, 1242, 1483, 1593
Sau3AI GATC 9 cut(s) 98, 490, 508, 597, 832, 1113, 1285, 1294, 1405
Sau96I GGNCC 4 cut(s) 91, 206, 255, 658
ScaI AGTACT 2 cut(s) 1009, 1346
SchI GAGTC 3 cut(s) 227, 354, 1431
ScrFI CCNGG 1 cut(s) 1056
SduI GDGCHC 2 cut(s) 1000, 1056
SfaNI GCATC 1 cut(s) 717
SfoI GGCGCC 1 cut(s) 67
SinI GGWCC 3 cut(s) 91, 255, 658
SmiMI CAYNNNNRTG 2 cut(s) 1109, 1184
SpeI ACTAGT 1 cut(s) 782
Sse9I AATT 6 cut(s) 544, 639, 848, 886, 1311, 1421
SsiI CCGC 9 cut(s) 94, 111, 123, 152, 233, 236, 299, 1132, 1272
SspDI GGCGCC 1 cut(s) 65
SspI AATATT 1 cut(s) 579
SspMI CTAG 7 cut(s) 47, 437, 690, 783, 1533, 1589, 1659
StyD4I CCNGG 1 cut(s) 1054
StyI CCWWGG 1 cut(s) 1035
TaaI ACNGT 2 cut(s) 226, 1002
TaiI ACGT 1 cut(s) 57
TaqI TCGA 1 cut(s) 221
TasI AATT 6 cut(s) 544, 639, 848, 886, 1311, 1421
TatI WGTACW 3 cut(s) 1007, 1344, 1661
TauI GCSGC 1 cut(s) 236
TfiI GAWTC 5 cut(s) 20, 302, 741, 812, 1197
Tru1I TTAA 3 cut(s) 767, 1424, 1554
Tru9I TTAA 3 cut(s) 767, 1424, 1554
TscAI CASTG 3 cut(s) 672, 688, 1606
TseFI GTSAC 1 cut(s) 226
TseI GCWGC 5 cut(s) 761, 1073, 1241, 1482, 1592
Tsp45I GTSAC 1 cut(s) 226
TspDTI ATGAA 4 cut(s) 121, 578, 1271, 1434
TspRI CASTG 3 cut(s) 672, 688, 1606
Tth111I GACNNNGTC 1 cut(s) 53
VneI GTGCAC 1 cut(s) 996
VpaK11BI GGWCC 3 cut(s) 91, 255, 658
XapI RAATTY 1 cut(s) 639
XceI RCATGY 2 cut(s) 975, 1627
XcmI CCANNNNNNNNNTGG 1 cut(s) 1323
XmiI GTMKAC 3 cut(s) 60, 221, 1387
XspI CTAG 7 cut(s) 47, 437, 690, 783, 1533, 1589, 1659
ZraI GACGTC 1 cut(s) 55
ZrmI AGTACT 2 cut(s) 1009, 1346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.