RchiOBHm_Chr7g0227731

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000191
Physical Location & Seq
Reverse (-)
50971747 .. 50974801
3055 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20398

Sequence Viewer

Length: 1659 bp
ATGGCTACTTCTCACGAAGAATCTCCAGACACCCAAAGCCCACTCATAGACGACGTCGTAGACAGCGCCGTTGACTACAAAGGCCATCGGGTCCACAGATCCACCTCCGGCGGTTGGCGTTCCGCATCCTTCATAATAGGGGTGGAAGTTGCGGAGAGGTTCGCATTCTATGGGATTAGCTCGAATCTGATAACGTTTCTGACGGGGCCGTTGGGACAGTCGACTGTGACGGCGGCGGAGAATGTGAACATATGGACCGGAGCGGCGCTGTTGCTTCCTTTGTTGGGAGCATTCGTGGCGGATTCTTTTCTGGGTTGCTATCGCACTATTGTTGTTGCTTCTCTCCTCTACATTTTGGGACTCGGCTTGTTGACCGTGTCGGCCTTGCTTACTTCTTCTGAGCTTCAAATAGTGTTATTCTTCTTCTCTCTATATCTAGTAGCAGTTGCGCAAGGTGGACACAAGCCCTGTGTTCAGGCTTTCGGGGCAGATCAGTTTGATGGACAAGATCGAGAGGAGTGCAAAGCGAAAAGCTCATTCTTCAATTGGTGGTACTTTGGTATGAATGCAGGCATACTATTGACATTCTCAGTATTGATCTACATACAGGACAATCTAAGCTGGGGTCTGGGTTTTGGAATTCCTTGTGTTGTGATGGTCCTTGCAATGATTTTTTTTGTCAGCGGAACTAGGACATACCGGTATAGCATCAAAGGGGAGGAGGAAAGCCCATTTGTGAGAATTGGCAAGGTTTTTGTTGCTGCATTAAGGAACCGGCGAACTTGTCTTTCAGCAATAGCTTCTGAAGAGGAATCCCGTGGAACATTGCCTGATCAATTCAAGTTTCTCAACAAAGCCTTGCTTGCACCAGATAATTTGAAGAAAAACGGGAGGGTGTGTACCATCACTGAGGTTGAGGAAGCAAAGGCTGTCCTGAGGCTGTTTCCAATATGGGCTACATGCTTGCCATTTGCTATTGTATGTGCACAGTCCAGTACATTCTTCACCAAGCAAGGTGCTACCATGGACAGAACTATTGTGCCCGGTTTTGACATTCCAGCTGCTTCACTTCAGTCATTTATCTGCCTTGCCATAATGATGATCGTACCCATTTATGACCGCATTTTTGTTCCAATGGCAAGAGCTTTCACCAGAGAACCCTTTGGAATTACAATGCTACAAAGAATTGGAACTGGGATGTTTTTCTCTATCATATCTATGGTCGTTGCAGCTTTAGTTGAGATGAAAAGGCTCCAAACTGCCAAAGATTATGATCTGGTTGATTTGCCAAGTGCCACAATTCCAATGAGTATTTGGTGGTTGGTTCCTCAGTACTTTTTGTATGGACTATCCGATGTTTTCACCATTGTTGGTCTACAAGAGTTCTTCTATGATCAGGTGCCAAATGAATTAAGAAGCATGGGACTTGCTCTCTACCTCAGTATATTTGGTGTGGGACACTTTCTGAGCAGCTTTCTTATCTTTATTATTGAGGAAGCAACCAGTTGGGGAGGCCACACTAGCTGGTTTTCCGACAACCTTAATCTTGCACATCTTGATTACTTTTACTGGTTACTAGCAGCACTCTGTGGAGTAGGATTGTTGGCCTACATGTATTTTGCAAAATCTTACATTTACAATAGGGCTAGTACAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

552

Amino Acids

61.3

Weight (kDa)

5.6

Isoelectric Point (pI)

42.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 54 - 490 7.2e-11 Major Facilitator Superfamily
PTR2 PF00854 107 - 509 1.3e-94 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 57
Acc16I TGCGCA 1 cut(s) 450
AccB1I GGYRCC 1 cut(s) 1399
AccBSI CCGCTC 1 cut(s) 263
AccI GTMKAC 3 cut(s) 60, 221, 1375
AciI CCGC 9 cut(s) 111, 123, 152, 233, 236, 263, 299, 684, 1120
AclI AACGTT 1 cut(s) 194
AclWI GGATC 1 cut(s) 93
AcsI RAATTY 1 cut(s) 639
AcuI CTGAAG 2 cut(s) 825, 1055
AcyI GRCGYC 1 cut(s) 54
AdeI CACNNNGTG 1 cut(s) 1589
AfaI GTAC 6 cut(s) 554, 901, 997, 1107, 1334, 1651
AfiI CCNNNNNNNGG 2 cut(s) 114, 284
AflIII ACRYGT 1 cut(s) 1611
AgeI ACCGGT 1 cut(s) 699
AgsI TTSAA 4 cut(s) 407, 544, 841, 880
Alw21I GWGCWC 1 cut(s) 988
Alw44I GTGCAC 1 cut(s) 984
AlwI GGATC 1 cut(s) 93
AoxI GGCC 5 cut(s) 82, 206, 381, 1513, 1605
ApaLI GTGCAC 1 cut(s) 984
ApeKI GCWGC 5 cut(s) 761, 1061, 1229, 1470, 1580
ApoI RAATTY 1 cut(s) 639
ArsI GACNNNNNNTTYG 2 cut(s) 1109, 1141
AsiGI ACCGGT 1 cut(s) 699
AspLEI GCGC 3 cut(s) 68, 268, 451
AspS9I GGNCC 4 cut(s) 91, 206, 255, 658
AsuC2I CCSGG 1 cut(s) 1044
AsuHPI GGTGA 3 cut(s) 997, 1141, 1354
AvaII GGWCC 3 cut(s) 91, 255, 658
AxyI CCTNAGG 1 cut(s) 935
BaeGI GKGCMC 2 cut(s) 988, 1044
BaeI ACNNNNGTAYC 2 cut(s) 544, 577
BanI GGYRCC 1 cut(s) 1399
Bbv12I GWGCWC 1 cut(s) 988
BbvI GCAGC 5 cut(s) 748, 1048, 1241, 1482, 1592
BccI CCATC 4 cut(s) 93, 494, 649, 911
BceAI ACGGC 3 cut(s) 53, 193, 246
BcgI CGANNNNNNTGC 2 cut(s) 501, 535
BclI TGATCA 2 cut(s) 832, 1393
BcnI CCSGG 1 cut(s) 1044
BfaI CTAG 5 cut(s) 437, 690, 1521, 1577, 1647
BfoI RGCGCY 2 cut(s) 69, 269
BisI GCNGC 7 cut(s) 234, 264, 762, 1062, 1230, 1471, 1581
BlsI GCNGC 7 cut(s) 235, 265, 763, 1063, 1231, 1472, 1582
BmcAI AGTACT 1 cut(s) 1334
Bme1390I CCNGG 1 cut(s) 1044
Bme18I GGWCC 3 cut(s) 91, 255, 658
BmgT120I GGNCC 4 cut(s) 91, 206, 255, 658
BmiI GGNNCC 6 cut(s) 92, 207, 773, 1253, 1326, 1401
BmrFI CCNGG 1 cut(s) 1044
BmrI ACTGGG 1 cut(s) 1203
BmsI GCATC 2 cut(s) 134, 717
BmuI ACTGGG 1 cut(s) 1203
BpmI CTGGAG 1 cut(s) 9
BpuMI CCSGG 1 cut(s) 1044
BsaBI GATNNNNATC 1 cut(s) 1272
BsaHI GRCGYC 1 cut(s) 54
BsaJI CCNNGG 2 cut(s) 817, 1023
BsaWI WCCGGW 2 cut(s) 257, 699
BsaXI ACNNNNNCTCC 4 cut(s) 279, 309, 883, 913
Bsc4I CCNNNNNNNGG 2 cut(s) 114, 284
Bse118I RCCGGY 2 cut(s) 699, 774
Bse1I ACTGG 4 cut(s) 993, 1198, 1503, 1574
Bse21I CCTNAGG 1 cut(s) 935
Bse3DI GCAATG 2 cut(s) 672, 824
Bse8I GATNNNNATC 1 cut(s) 1272
BseDI CCNNGG 2 cut(s) 817, 1023
BseGI GGATG 2 cut(s) 125, 1203
BseJI GATNNNNATC 1 cut(s) 1272
BseLI CCNNNNNNNGG 2 cut(s) 114, 284
BseMI GCAATG 2 cut(s) 672, 824
BseMII CTCAG 7 cut(s) 390, 603, 900, 926, 1343, 1453, 1457
BseNI ACTGG 4 cut(s) 993, 1198, 1503, 1574
BseRI GAGGAG 3 cut(s) 335, 530, 734
BseSI GKGCMC 2 cut(s) 988, 1044
BseXI GCAGC 5 cut(s) 748, 1048, 1241, 1482, 1592
BseYI CCCAGC 1 cut(s) 621
BshFI GGCC 5 cut(s) 84, 208, 383, 1515, 1607
BshNI GGYRCC 1 cut(s) 1399
BshTI ACCGGT 1 cut(s) 699
BsiHKAI GWGCWC 1 cut(s) 988
BsiSI CCGG 5 cut(s) 108, 258, 700, 775, 1044
BslFI GGGAC 4 cut(s) 228, 372, 1437, 1470
BslI CCNNNNNNNGG 2 cut(s) 114, 284
BsmFI GGGAC 4 cut(s) 228, 372, 1437, 1470
BsmI GAATGC 3 cut(s) 164, 290, 571
BsnI GGCC 5 cut(s) 84, 208, 383, 1515, 1607
Bsp1286I GDGCHC 2 cut(s) 988, 1044
Bsp143I GATC 8 cut(s) 98, 490, 508, 597, 832, 1101, 1273, 1393
Bsp19I CCATGG 1 cut(s) 1023
BspACI CCGC 9 cut(s) 111, 123, 152, 233, 236, 263, 299, 684, 1120
BspANI GGCC 5 cut(s) 84, 208, 383, 1515, 1607
BspCNI CTCAG 7 cut(s) 391, 602, 901, 927, 1342, 1452, 1458
BspLI GGNNCC 6 cut(s) 92, 207, 773, 1253, 1326, 1401
BspPI GGATC 1 cut(s) 93
BspT107I GGYRCC 1 cut(s) 1399
BsrBI CCGCTC 1 cut(s) 263
BsrDI GCAATG 2 cut(s) 672, 824
BsrFI RCCGGY 2 cut(s) 699, 774
BsrI ACTGG 4 cut(s) 993, 1198, 1503, 1574
BssAI RCCGGY 2 cut(s) 699, 774
BssECI CCNNGG 2 cut(s) 817, 1023
BssMI GATC 8 cut(s) 98, 490, 508, 597, 832, 1101, 1273, 1393
BssNI GRCGYC 1 cut(s) 54
BssT1I CCWWGG 1 cut(s) 1023
Bst4CI ACNGT 4 cut(s) 219, 226, 376, 990
Bst6I CTCTTC 1 cut(s) 801
BstACI GRCGYC 1 cut(s) 54
BstC8I GCNNGC 3 cut(s) 571, 864, 965
BstDEI CTNAG 8 cut(s) 399, 589, 617, 909, 935, 1329, 1439, 1466
BstDSI CCRYGG 2 cut(s) 817, 1023
BstF5I GGATG 2 cut(s) 125, 1203
BstH2I RGCGCY 2 cut(s) 69, 269
BstHHI GCGC 3 cut(s) 68, 268, 451
BstKTI GATC 8 cut(s) 101, 493, 511, 600, 835, 1104, 1276, 1396
BstMBI GATC 8 cut(s) 98, 490, 508, 597, 832, 1101, 1273, 1393
BstMWI GCNNNNNNNGC 4 cut(s) 296, 485, 863, 1521
BstNSI RCATGY 2 cut(s) 963, 1615
BstSCI CCNGG 1 cut(s) 1042
BstSLI GKGCMC 2 cut(s) 988, 1044
BstV1I GCAGC 5 cut(s) 748, 1048, 1241, 1482, 1592
BstX2I RGATCY 1 cut(s) 98
BstYI RGATCY 1 cut(s) 98
Bsu36I CCTNAGG 1 cut(s) 935
BsuRI GGCC 5 cut(s) 84, 208, 383, 1515, 1607
BtgI CCRYGG 2 cut(s) 817, 1023
BtsCI GGATG 2 cut(s) 125, 1203
BtsIMutI CAGTG 1 cut(s) 906
Cac8I GCNNGC 3 cut(s) 571, 864, 965
CfoI GCGC 3 cut(s) 68, 268, 451
Cfr10I RCCGGY 2 cut(s) 699, 774
Cfr13I GGNCC 4 cut(s) 91, 206, 255, 658
Csp6I GTAC 6 cut(s) 553, 900, 996, 1106, 1333, 1650
CspAI ACCGGT 1 cut(s) 699
CviAII CATG 4 cut(s) 960, 1024, 1420, 1612
CviQI GTAC 6 cut(s) 553, 900, 996, 1106, 1333, 1650
DdeI CTNAG 8 cut(s) 399, 589, 617, 909, 935, 1329, 1439, 1466
DpnI GATC 8 cut(s) 100, 492, 510, 599, 834, 1103, 1275, 1395
DpnII GATC 8 cut(s) 98, 490, 508, 597, 832, 1101, 1273, 1393
DraIII CACNNNGTG 1 cut(s) 1589
Eam1104I CTCTTC 1 cut(s) 801
EarI CTCTTC 1 cut(s) 801
EciI GGCGGA 2 cut(s) 251, 314
Eco130I CCWWGG 1 cut(s) 1023
Eco47I GGWCC 3 cut(s) 91, 255, 658
Eco57I CTGAAG 2 cut(s) 825, 1055
Eco81I CCTNAGG 1 cut(s) 935
EcoRI GAATTC 1 cut(s) 639
EcoT14I CCWWGG 1 cut(s) 1023
ErhI CCWWGG 1 cut(s) 1023
FaeI CATG 4 cut(s) 963, 1027, 1423, 1615
FalI AAGNNNNNCTT 2 cut(s) 846, 878
FaqI GGGAC 4 cut(s) 228, 372, 1437, 1470
FatI CATG 4 cut(s) 959, 1023, 1419, 1611
FauNDI CATATG 1 cut(s) 251
FbaI TGATCA 2 cut(s) 832, 1393
FblI GTMKAC 3 cut(s) 60, 221, 1375
Fnu4HI GCNGC 7 cut(s) 234, 264, 762, 1062, 1230, 1471, 1581
FokI GGATG 2 cut(s) 112, 1210
Fsp4HI GCNGC 7 cut(s) 234, 264, 762, 1062, 1230, 1471, 1581
FspBI CTAG 5 cut(s) 437, 690, 1521, 1577, 1647
FspI TGCGCA 1 cut(s) 450
GlaI GCGC 3 cut(s) 67, 267, 450
GluI GCNGC 7 cut(s) 234, 264, 762, 1062, 1230, 1471, 1581
GsaI CCCAGC 1 cut(s) 625
GsuI CTGGAG 1 cut(s) 9
HaeII RGCGCY 2 cut(s) 69, 269
HaeIII GGCC 5 cut(s) 84, 208, 383, 1515, 1607
HapII CCGG 5 cut(s) 108, 258, 700, 775, 1044
HhaI GCGC 3 cut(s) 68, 268, 451
Hin1I GRCGYC 1 cut(s) 54
Hin1II CATG 4 cut(s) 963, 1027, 1423, 1615
Hin6I GCGC 3 cut(s) 66, 266, 449
HinP1I GCGC 3 cut(s) 66, 266, 449
HincII GTYRAC 3 cut(s) 73, 222, 372
HindII GTYRAC 3 cut(s) 73, 222, 372
HinfI GANTC 5 cut(s) 20, 184, 302, 360, 812
HpaII CCGG 5 cut(s) 108, 258, 700, 775, 1044
HphI GGTGA 3 cut(s) 997, 1141, 1354
Hpy188I TCNGA 7 cut(s) 189, 201, 400, 805, 1354, 1467, 1534
Hpy188III TCNNGA 5 cut(s) 14, 26, 512, 934, 1556
Hpy99I CGWCG 2 cut(s) 56, 59
HpyAV CCTTC 1 cut(s) 139
HpyCH4III ACNGT 4 cut(s) 219, 226, 376, 990
HpyCH4IV ACGT 2 cut(s) 54, 194
HpyCH4V TGCA 9 cut(s) 522, 569, 665, 764, 866, 986, 1229, 1550, 1622
HpyF10VI GCNNNNNNNGC 4 cut(s) 296, 485, 863, 1521
HpyF3I CTNAG 8 cut(s) 399, 589, 617, 909, 935, 1329, 1439, 1466
HpySE526I ACGT 2 cut(s) 54, 194
Hsp92I GRCGYC 1 cut(s) 54
Hsp92II CATG 4 cut(s) 963, 1027, 1423, 1615
HspAI GCGC 3 cut(s) 66, 266, 449
Ksp22I TGATCA 2 cut(s) 832, 1393
Kzo9I GATC 8 cut(s) 98, 490, 508, 597, 832, 1101, 1273, 1393
LmnI GCTCC 3 cut(s) 260, 287, 1257
Lsp1109I GCAGC 5 cut(s) 748, 1048, 1241, 1482, 1592
LweI GCATC 2 cut(s) 134, 717
MaeI CTAG 5 cut(s) 437, 690, 1521, 1577, 1647
MaeII ACGT 2 cut(s) 54, 194
MaeIII GTNAC 2 cut(s) 226, 1572
MalI GATC 8 cut(s) 100, 492, 510, 599, 834, 1103, 1275, 1395
MbiI CCGCTC 1 cut(s) 263
MboI GATC 8 cut(s) 98, 490, 508, 597, 832, 1101, 1273, 1393
MboII GAAGA 9 cut(s) 29, 387, 412, 415, 532, 818, 892, 994, 1378
MfeI CAATTG 1 cut(s) 544
MflI RGATCY 1 cut(s) 98
MhlI GDGCHC 2 cut(s) 988, 1044
MluCI AATT 9 cut(s) 544, 639, 741, 836, 874, 1167, 1185, 1299, 1409
MlyI GAGTC 1 cut(s) 354
MmeI TCCRAC 1 cut(s) 1557
MseI TTAA 3 cut(s) 767, 1412, 1542
MslI CAYNNNNRTG 2 cut(s) 1097, 1217
MspA1I CMGCKG 2 cut(s) 684, 1061
MspI CCGG 5 cut(s) 108, 258, 700, 775, 1044
MspR9I CCNGG 1 cut(s) 1044
MunI CAATTG 1 cut(s) 544
Mva1269I GAATGC 3 cut(s) 164, 290, 571
MwoI GCNNNNNNNGC 4 cut(s) 296, 485, 863, 1521
NciI CCSGG 1 cut(s) 1044
NcoI CCATGG 1 cut(s) 1023
NdeI CATATG 1 cut(s) 251
NdeII GATC 8 cut(s) 98, 490, 508, 597, 832, 1101, 1273, 1393
NlaIII CATG 4 cut(s) 963, 1027, 1423, 1615
NlaIV GGNNCC 6 cut(s) 92, 207, 773, 1253, 1326, 1401
NmeAIII GCCGAG 1 cut(s) 342
NmuCI GTSAC 1 cut(s) 226
NsbI TGCGCA 1 cut(s) 450
NspI RCATGY 2 cut(s) 963, 1615
PciI ACATGT 1 cut(s) 1611
PctI GAATGC 3 cut(s) 164, 290, 571
PfeI GAWTC 4 cut(s) 20, 184, 302, 812
PflFI GACNNNGTC 2 cut(s) 53, 376
PinAI ACCGGT 1 cut(s) 699
PkrI GCNGC 7 cut(s) 235, 265, 763, 1063, 1231, 1472, 1582
PleI GAGTC 1 cut(s) 354
PpsI GAGTC 1 cut(s) 354
PscI ACATGT 1 cut(s) 1611
Psp1406I AACGTT 1 cut(s) 194
PspFI CCCAGC 1 cut(s) 621
PspN4I GGNNCC 6 cut(s) 92, 207, 773, 1253, 1326, 1401
PspPI GGNCC 4 cut(s) 91, 206, 255, 658
PsuI RGATCY 1 cut(s) 98
PsyI GACNNNGTC 2 cut(s) 53, 376
PvuII CAGCTG 1 cut(s) 1061
RsaI GTAC 6 cut(s) 554, 901, 997, 1107, 1334, 1651
RsaNI GTAC 6 cut(s) 553, 900, 996, 1106, 1333, 1650
RseI CAYNNNNRTG 2 cut(s) 1097, 1217
SalI GTCGAC 1 cut(s) 220
SaqAI TTAA 3 cut(s) 767, 1412, 1542
SatI GCNGC 7 cut(s) 234, 264, 762, 1062, 1230, 1471, 1581
Sau3AI GATC 8 cut(s) 98, 490, 508, 597, 832, 1101, 1273, 1393
Sau96I GGNCC 4 cut(s) 91, 206, 255, 658
ScaI AGTACT 1 cut(s) 1334
SchI GAGTC 1 cut(s) 354
ScrFI CCNGG 1 cut(s) 1044
SduI GDGCHC 2 cut(s) 988, 1044
SfaNI GCATC 2 cut(s) 134, 717
SinI GGWCC 3 cut(s) 91, 255, 658
SmiMI CAYNNNNRTG 2 cut(s) 1097, 1217
Sse9I AATT 9 cut(s) 544, 639, 741, 836, 874, 1167, 1185, 1299, 1409
SsiI CCGC 9 cut(s) 111, 123, 152, 233, 236, 263, 299, 684, 1120
SspMI CTAG 5 cut(s) 437, 690, 1521, 1577, 1647
StyD4I CCNGG 1 cut(s) 1042
StyI CCWWGG 1 cut(s) 1023
TaaI ACNGT 4 cut(s) 219, 226, 376, 990
TaiI ACGT 2 cut(s) 57, 197
TaqI TCGA 3 cut(s) 182, 221, 511
TasI AATT 9 cut(s) 544, 639, 741, 836, 874, 1167, 1185, 1299, 1409
TatI WGTACW 3 cut(s) 995, 1332, 1649
TauI GCSGC 2 cut(s) 236, 266
TfiI GAWTC 4 cut(s) 20, 184, 302, 812
Tru1I TTAA 3 cut(s) 767, 1412, 1542
Tru9I TTAA 3 cut(s) 767, 1412, 1542
TscAI CASTG 1 cut(s) 913
TseFI GTSAC 1 cut(s) 226
TseI GCWGC 5 cut(s) 761, 1061, 1229, 1470, 1580
Tsp45I GTSAC 1 cut(s) 226
TspDTI ATGAA 4 cut(s) 121, 578, 1259, 1422
TspRI CASTG 1 cut(s) 913
Tth111I GACNNNGTC 2 cut(s) 53, 376
VneI GTGCAC 1 cut(s) 984
VpaK11BI GGWCC 3 cut(s) 91, 255, 658
XapI RAATTY 1 cut(s) 639
XceI RCATGY 2 cut(s) 963, 1615
XcmI CCANNNNNNNNNTGG 1 cut(s) 1311
XmiI GTMKAC 3 cut(s) 60, 221, 1375
XspI CTAG 5 cut(s) 437, 690, 1521, 1577, 1647
ZraI GACGTC 1 cut(s) 55
ZrmI AGTACT 1 cut(s) 1334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.