RchiOBHm_Chr7g0227701

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000191
Physical Location & Seq
Reverse (-)
50947683 .. 50951180
3498 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20395

Sequence Viewer

Length: 1629 bp
ATGGCTACATCTCTCGAAGAATATCCGGAGACCCGAAGTCCACTCCTAGACGACGTCGTAGACGGCGCCGTTGATTACAAAGGCCATCAGGTCCACAGATCAACTTCCGGCGGTTGGCGTTCCGCATCCTTCATAATAGGCGTGGAAGTTGCGGAGAGGTTCGCCTACAGTGGAATAAGCTCGAATCTGATAACGTTTCTGACGGGACCGTTGGGAGAGTCGACGGTGACGGCGGCGGAGAATGTGAACATATGGTCCGGAACGGCGCAGTTGCTTCCTCTGTTGGGAGCATTCGTGGCGGATTCTTTTCTGGGTCGCTATCGCACCATTATTGTTGCTTCTCTCCTCTACATTTTGGGACTCGGCTTGTTGACCGTGTCGGCCGTTCTTCCTTTTTCTCAGCTTCAAATATTGTTATTCTTCTTCTCTCTATATCTAGCAGCAGTTGGGCAAGGCGGACACAAGCCCTGTGTTCAGGCTTTCGGGGCAGATCAGTTTGATGGACAAGATCCAGAGGAGTGCAAAGCGAAAAGCTCATTCTTCAATTGGTGGTACTTCGGTATCTGTGCAGGCTCGCTATTCACAGTCTCAATATTGGTCTACATACAGGACAATCTAAGCTGGGGTCTGGGTTTTGGAATTCCTTGTGTTGTGATGGTTCTTGCACTGATTATTTTTGTCAGTGGAACTCGGACATACCGGTATAGCGTCAAAGGGGAGGAGGAAAGCCCATTTGTGAGAATTGGCAAGGTTTTTGAATCCCGTGGAACCTTGCCTGATCAAAGTTTTGAACAATTCAAGTTCCTCAACAAAGCGTTGCTCGCACCAGATGATTTGGAGAAAAACAGGAAGGTGTGTACCATCGCTGAGGTTGAGGAAGCAAAGGCTGTTCTTAGGCTGTTTCCAATATGGGCTACATGCTCGGCATATGCTATTGTATATGCACAGTCCACTACATTCTTCACCAAGCAAGGTGCCACCATGGACAGAACTCTTGTTCCTGGTTTTGACATACCAGCTGCTTCACTTCAGTCATTTATCAGCCTTGCCATATTGATGATCATACCCATTTATGACCGCATTTTTGTTCCAACGGCAAGAGCTTTCACCAGAGAACCCTCTGGCATTACAATGCTACAAAGAATCGGAACTGGGATGTTTTTCTGTATCATATCTATGGTCGTTGCAGCTTTAGTTGAGATGAAAAGGCTCCAAACTGCCAAAGATTATGATCTGGTTGATCTGCCAAGTGCCACAATTCCAATGAGTATTTGGTGGTTGGTTCCTCAGTACTTTCTCTATGGACTAGCCGATGTTTTCACCATGGTTGGTCTACAAGAGTTCTTCTATGATCAGGTACCAAATGAATTAAGAAGCATGGGACTTGCTCTCTACCTCAGTATATTTGGTGTGGGACACTTTCTGAGCAGCTTTCTTATCTTTATTATTGAGGAAGCAACCAGTTGGGGAGGCCACACTAGCTGGTTTTCCGACAACCTTAATCTTGCACATCTTGATTACTTTTACTGGTTACTAGCAGCACTCTGTGCAGTAGGATTGTTGGCCTACATGTATTTTGCAAAATCTTACATTTATAATAGGGCTAGTACAATATCAACACAAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

542

Amino Acids

60.18

Weight (kDa)

5.14

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 55 - 476 5.7e-14 Major Facilitator Superfamily
PTR2 PF00854 107 - 495 3.4e-94 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1596
AatII GACGTC 1 cut(s) 57
Acc65I GGTACC 1 cut(s) 1357
AccB1I GGYRCC 3 cut(s) 65, 974, 1357
AccI GTMKAC 4 cut(s) 60, 221, 600, 1333
AccIII TCCGGA 2 cut(s) 25, 257
AciI CCGC 8 cut(s) 111, 123, 152, 233, 236, 299, 456, 1078
AclI AACGTT 1 cut(s) 194
AclWI GGATC 1 cut(s) 503
AcoI YGGCCR 1 cut(s) 381
AcsI RAATTY 1 cut(s) 639
AcuI CTGAAG 1 cut(s) 1013
AcyI GRCGYC 2 cut(s) 54, 66
AdeI CACNNNGTG 1 cut(s) 1547
AfaI GTAC 5 cut(s) 554, 859, 1292, 1359, 1609
AfiI CCNNNNNNNGG 2 cut(s) 114, 284
AflIII ACRYGT 1 cut(s) 1569
AgeI ACCGGT 1 cut(s) 699
AgsI TTSAA 5 cut(s) 407, 544, 758, 791, 799
AhdI GACNNNNNGTC 1 cut(s) 36
AjnI CCWGG 1 cut(s) 1000
AloI GAACNNNNNNTCC 4 cut(s) 239, 271, 982, 1014
AluBI AGCT 9 cut(s) 180, 403, 534, 621, 1019, 1103, 1190, 1431, 1482
AluI AGCT 9 cut(s) 180, 403, 534, 621, 1019, 1103, 1190, 1431, 1482
Alw26I GTCTC 2 cut(s) 23, 592
AlwI GGATC 1 cut(s) 503
Aor13HI TCCGGA 2 cut(s) 25, 257
AoxI GGCC 4 cut(s) 82, 381, 1471, 1563
ApeKI GCWGC 5 cut(s) 440, 1019, 1187, 1428, 1538
ApoI RAATTY 1 cut(s) 639
ArsI GACNNNNNNTTYG 2 cut(s) 1067, 1099
AsiGI ACCGGT 1 cut(s) 699
Asp718I GGTACC 1 cut(s) 1357
AspLEI GCGC 2 cut(s) 68, 268
AspS9I GGNCC 3 cut(s) 91, 206, 255
AsuHPI GGTGA 4 cut(s) 238, 955, 1099, 1312
AvaII GGWCC 3 cut(s) 91, 206, 255
BaeI ACNNNNGTAYC 4 cut(s) 544, 544, 577, 577
BanI GGYRCC 3 cut(s) 65, 974, 1357
BbvCI CCTCAGC 1 cut(s) 867
BbvI GCAGC 5 cut(s) 452, 1006, 1199, 1440, 1550
BccI CCATC 4 cut(s) 93, 494, 649, 869
BceAI ACGGC 6 cut(s) 53, 79, 246, 279, 368, 1110
BciT130I CCWGG 1 cut(s) 1002
BclI TGATCA 3 cut(s) 778, 1059, 1351
BcoDI GTCTC 2 cut(s) 23, 592
BfaI CTAG 6 cut(s) 47, 437, 1307, 1479, 1535, 1605
BfmI CTRYAG 1 cut(s) 166
BfoI RGCGCY 1 cut(s) 69
BisI GCNGC 6 cut(s) 234, 441, 1020, 1188, 1429, 1539
BlsI GCNGC 6 cut(s) 235, 442, 1021, 1189, 1430, 1540
BmcAI AGTACT 1 cut(s) 1292
Bme1390I CCNGG 1 cut(s) 1002
Bme18I GGWCC 3 cut(s) 91, 206, 255
BmeRI GACNNNNNGTC 1 cut(s) 36
BmgT120I GGNCC 3 cut(s) 91, 206, 255
BmiI GGNNCC 7 cut(s) 67, 207, 769, 976, 1211, 1284, 1359
BmrFI CCNGG 1 cut(s) 1002
BmrI ACTGGG 1 cut(s) 1161
BmsI GCATC 1 cut(s) 134
BmuI ACTGGG 1 cut(s) 1161
Bpu10I CCTNAGC 1 cut(s) 867
BsaBI GATNNNNATC 1 cut(s) 1230
BsaHI GRCGYC 2 cut(s) 54, 66
BsaI GGTCTC 1 cut(s) 23
BsaJI CCNNGG 3 cut(s) 763, 981, 1323
BsaWI WCCGGW 3 cut(s) 25, 257, 699
BsaXI ACNNNNNCTCC 2 cut(s) 279, 309
Bsc4I CCNNNNNNNGG 2 cut(s) 114, 284
Bse118I RCCGGY 1 cut(s) 699
Bse1I ACTGG 3 cut(s) 1156, 1461, 1532
Bse8I GATNNNNATC 1 cut(s) 1230
BseAI TCCGGA 2 cut(s) 25, 257
BseBI CCWGG 1 cut(s) 1002
BseDI CCNNGG 3 cut(s) 763, 981, 1323
BseGI GGATG 2 cut(s) 125, 1161
BseJI GATNNNNATC 1 cut(s) 1230
BseLI CCNNNNNNNGG 2 cut(s) 114, 284
BseMII CTCAG 5 cut(s) 413, 858, 1301, 1411, 1415
BseNI ACTGG 3 cut(s) 1156, 1461, 1532
BseRI GAGGAG 3 cut(s) 335, 530, 734
BseX3I CGGCCG 1 cut(s) 381
BseXI GCAGC 5 cut(s) 452, 1006, 1199, 1440, 1550
BseYI CCCAGC 1 cut(s) 621
BsgI GTGCAG 2 cut(s) 588, 1569
Bsh1285I CGRYCG 1 cut(s) 384
BshFI GGCC 4 cut(s) 84, 383, 1473, 1565
BshNI GGYRCC 3 cut(s) 65, 974, 1357
BshTI ACCGGT 1 cut(s) 699
BsiEI CGRYCG 1 cut(s) 384
BsiSI CCGG 4 cut(s) 26, 108, 258, 700
BslFI GGGAC 4 cut(s) 219, 372, 1395, 1428
BslI CCNNNNNNNGG 2 cut(s) 114, 284
BsmAI GTCTC 2 cut(s) 23, 592
BsmFI GGGAC 4 cut(s) 219, 372, 1395, 1428
BsmI GAATGC 1 cut(s) 290
BsnI GGCC 4 cut(s) 84, 383, 1473, 1565
Bso31I GGTCTC 1 cut(s) 23
Bsp13I TCCGGA 2 cut(s) 25, 257
Bsp143I GATC 8 cut(s) 98, 490, 508, 778, 1059, 1231, 1240, 1351
Bsp19I CCATGG 2 cut(s) 981, 1323
BspACI CCGC 8 cut(s) 111, 123, 152, 233, 236, 299, 456, 1078
BspANI GGCC 4 cut(s) 84, 383, 1473, 1565
BspCNI CTCAG 5 cut(s) 412, 859, 1300, 1410, 1416
BspEI TCCGGA 2 cut(s) 25, 257
BspLI GGNNCC 7 cut(s) 67, 207, 769, 976, 1211, 1284, 1359
BspPI GGATC 1 cut(s) 503
BspT107I GGYRCC 3 cut(s) 65, 974, 1357
BspTNI GGTCTC 1 cut(s) 23
BsrFI RCCGGY 1 cut(s) 699
BsrI ACTGG 3 cut(s) 1156, 1461, 1532
BssAI RCCGGY 1 cut(s) 699
BssECI CCNNGG 3 cut(s) 763, 981, 1323
BssMI GATC 8 cut(s) 98, 490, 508, 778, 1059, 1231, 1240, 1351
BssNI GRCGYC 2 cut(s) 54, 66
BssT1I CCWWGG 2 cut(s) 981, 1323
Bst2UI CCWGG 1 cut(s) 1002
Bst4CI ACNGT 6 cut(s) 170, 210, 226, 376, 586, 948
BstACI GRCGYC 2 cut(s) 54, 66
BstAPI GCANNNNNTGC 1 cut(s) 1547
BstC8I GCNNGC 3 cut(s) 571, 575, 822
BstDEI CTNAG 7 cut(s) 399, 617, 867, 893, 1287, 1397, 1424
BstDSI CCRYGG 3 cut(s) 763, 981, 1323
BstF5I GGATG 2 cut(s) 125, 1161
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 2 cut(s) 68, 268
BstKTI GATC 8 cut(s) 101, 493, 511, 781, 1062, 1234, 1243, 1354
BstMAI GTCTC 2 cut(s) 23, 592
BstMBI GATC 8 cut(s) 98, 490, 508, 778, 1059, 1231, 1240, 1351
BstMCI CGRYCG 1 cut(s) 384
BstMWI GCNNNNNNNGC 5 cut(s) 296, 485, 821, 1479, 1547
BstNI CCWGG 1 cut(s) 1002
BstNSI RCATGY 2 cut(s) 921, 1573
BstSCI CCNGG 1 cut(s) 1000
BstSFI CTRYAG 1 cut(s) 166
BstV1I GCAGC 5 cut(s) 452, 1006, 1199, 1440, 1550
BstX2I RGATCY 1 cut(s) 508
BstYI RGATCY 1 cut(s) 508
BstZI CGGCCG 1 cut(s) 381
BsuRI GGCC 4 cut(s) 84, 383, 1473, 1565
BtgI CCRYGG 3 cut(s) 763, 981, 1323
BtgZI GCGATG 1 cut(s) 847
BtsCI GGATG 2 cut(s) 125, 1161
BtsIMutI CAGTG 3 cut(s) 175, 665, 688
Cac8I GCNNGC 3 cut(s) 571, 575, 822
CfoI GCGC 2 cut(s) 68, 268
Cfr10I RCCGGY 1 cut(s) 699
Cfr13I GGNCC 3 cut(s) 91, 206, 255
CseI GACGC 1 cut(s) 697
Csp6I GTAC 5 cut(s) 553, 858, 1291, 1358, 1608
CspAI ACCGGT 1 cut(s) 699
CviAII CATG 5 cut(s) 918, 982, 1324, 1378, 1570
CviQI GTAC 5 cut(s) 553, 858, 1291, 1358, 1608
DdeI CTNAG 7 cut(s) 399, 617, 867, 893, 1287, 1397, 1424
DinI GGCGCC 1 cut(s) 67
DpnI GATC 8 cut(s) 100, 492, 510, 780, 1061, 1233, 1242, 1353
DpnII GATC 8 cut(s) 98, 490, 508, 778, 1059, 1231, 1240, 1351
DraIII CACNNNGTG 1 cut(s) 1547
DriI GACNNNNNGTC 1 cut(s) 36
EaeI YGGCCR 1 cut(s) 381
EagI CGGCCG 1 cut(s) 381
Eam1105I GACNNNNNGTC 1 cut(s) 36
EciI GGCGGA 3 cut(s) 251, 314, 471
EclXI CGGCCG 1 cut(s) 381
Eco130I CCWWGG 2 cut(s) 981, 1323
Eco31I GGTCTC 1 cut(s) 23
Eco47I GGWCC 3 cut(s) 91, 206, 255
Eco52I CGGCCG 1 cut(s) 381
Eco57I CTGAAG 1 cut(s) 1013
EcoRI GAATTC 1 cut(s) 639
EcoRII CCWGG 1 cut(s) 1000
EcoT14I CCWWGG 2 cut(s) 981, 1323
EgeI GGCGCC 1 cut(s) 67
EheI GGCGCC 1 cut(s) 67
ErhI CCWWGG 2 cut(s) 981, 1323
FaeI CATG 5 cut(s) 921, 985, 1327, 1381, 1573
FaqI GGGAC 4 cut(s) 219, 372, 1395, 1428
FatI CATG 5 cut(s) 917, 981, 1323, 1377, 1569
FauNDI CATATG 2 cut(s) 251, 928
FbaI TGATCA 3 cut(s) 778, 1059, 1351
FblI GTMKAC 4 cut(s) 60, 221, 600, 1333
Fnu4HI GCNGC 6 cut(s) 234, 441, 1020, 1188, 1429, 1539
FokI GGATG 2 cut(s) 112, 1168
Fsp4HI GCNGC 6 cut(s) 234, 441, 1020, 1188, 1429, 1539
FspBI CTAG 6 cut(s) 47, 437, 1307, 1479, 1535, 1605
GlaI GCGC 2 cut(s) 67, 267
GluI GCNGC 6 cut(s) 234, 441, 1020, 1188, 1429, 1539
GsaI CCCAGC 1 cut(s) 625
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 4 cut(s) 84, 383, 1473, 1565
HapII CCGG 4 cut(s) 26, 108, 258, 700
HgaI GACGC 1 cut(s) 697
HhaI GCGC 2 cut(s) 68, 268
Hin1I GRCGYC 2 cut(s) 54, 66
Hin1II CATG 5 cut(s) 921, 985, 1327, 1381, 1573
Hin6I GCGC 2 cut(s) 66, 266
HinP1I GCGC 2 cut(s) 66, 266
HincII GTYRAC 2 cut(s) 222, 372
HindII GTYRAC 2 cut(s) 222, 372
HinfI GANTC 6 cut(s) 184, 218, 302, 360, 758, 1143
HpaII CCGG 4 cut(s) 26, 108, 258, 700
HphI GGTGA 4 cut(s) 238, 955, 1099, 1312
Hpy188I TCNGA 6 cut(s) 189, 201, 693, 1148, 1425, 1492
Hpy188III TCNNGA 5 cut(s) 14, 26, 258, 512, 1514
Hpy99I CGWCG 3 cut(s) 56, 59, 226
HpyAV CCTTC 2 cut(s) 139, 844
HpyCH4III ACNGT 6 cut(s) 170, 210, 226, 376, 586, 948
HpyCH4IV ACGT 2 cut(s) 54, 194
HpyCH4V TGCA 8 cut(s) 522, 569, 665, 944, 1187, 1508, 1550, 1580
HpyF10VI GCNNNNNNNGC 5 cut(s) 296, 485, 821, 1479, 1547
HpyF3I CTNAG 7 cut(s) 399, 617, 867, 893, 1287, 1397, 1424
HpySE526I ACGT 2 cut(s) 54, 194
Hsp92I GRCGYC 2 cut(s) 54, 66
Hsp92II CATG 5 cut(s) 921, 985, 1327, 1381, 1573
HspAI GCGC 2 cut(s) 66, 266
KasI GGCGCC 1 cut(s) 65
Kpn2I TCCGGA 2 cut(s) 25, 257
KpnI GGTACC 1 cut(s) 1361
Ksp22I TGATCA 3 cut(s) 778, 1059, 1351
Kzo9I GATC 8 cut(s) 98, 490, 508, 778, 1059, 1231, 1240, 1351
LmnI GCTCC 2 cut(s) 287, 1215
Lsp1109I GCAGC 5 cut(s) 452, 1006, 1199, 1440, 1550
LweI GCATC 1 cut(s) 134
MaeI CTAG 6 cut(s) 47, 437, 1307, 1479, 1535, 1605
MaeII ACGT 2 cut(s) 54, 194
MaeIII GTNAC 2 cut(s) 226, 1530
MalI GATC 8 cut(s) 100, 492, 510, 780, 1061, 1233, 1242, 1353
MboI GATC 8 cut(s) 98, 490, 508, 778, 1059, 1231, 1240, 1351
MboII GAAGA 7 cut(s) 29, 380, 412, 415, 532, 952, 1336
MfeI CAATTG 1 cut(s) 544
MflI RGATCY 1 cut(s) 508
MluCI AATT 6 cut(s) 544, 639, 741, 794, 1257, 1367
Mly113I GGCGCC 1 cut(s) 66
MlyI GAGTC 2 cut(s) 227, 354
MmeI TCCRAC 2 cut(s) 1115, 1515
MroI TCCGGA 2 cut(s) 25, 257
MseI TTAA 2 cut(s) 1370, 1500
MslI CAYNNNNRTG 4 cut(s) 1055, 1130, 1175, 1624
MspA1I CMGCKG 1 cut(s) 1019
MspI CCGG 4 cut(s) 26, 108, 258, 700
MspR9I CCNGG 1 cut(s) 1002
MunI CAATTG 1 cut(s) 544
Mva1269I GAATGC 1 cut(s) 290
MvaI CCWGG 1 cut(s) 1002
MwoI GCNNNNNNNGC 5 cut(s) 296, 485, 821, 1479, 1547
NarI GGCGCC 1 cut(s) 66
NcoI CCATGG 2 cut(s) 981, 1323
NdeI CATATG 2 cut(s) 251, 928
NdeII GATC 8 cut(s) 98, 490, 508, 778, 1059, 1231, 1240, 1351
NlaIII CATG 5 cut(s) 921, 985, 1327, 1381, 1573
NlaIV GGNNCC 7 cut(s) 67, 207, 769, 976, 1211, 1284, 1359
NmeAIII GCCGAG 2 cut(s) 342, 902
NmuCI GTSAC 1 cut(s) 226
NspI RCATGY 2 cut(s) 921, 1573
PciI ACATGT 1 cut(s) 1569
PctI GAATGC 1 cut(s) 290
PfeI GAWTC 4 cut(s) 184, 302, 758, 1143
PflFI GACNNNGTC 2 cut(s) 53, 376
PinAI ACCGGT 1 cut(s) 699
PkrI GCNGC 6 cut(s) 235, 442, 1021, 1189, 1430, 1540
PleI GAGTC 2 cut(s) 226, 354
PluTI GGCGCC 1 cut(s) 69
PpsI GAGTC 2 cut(s) 226, 354
PscI ACATGT 1 cut(s) 1569
PsiI TTATAA 1 cut(s) 1596
Psp1406I AACGTT 1 cut(s) 194
Psp6I CCWGG 1 cut(s) 1000
PspFI CCCAGC 1 cut(s) 621
PspGI CCWGG 1 cut(s) 1000
PspN4I GGNNCC 7 cut(s) 67, 207, 769, 976, 1211, 1284, 1359
PspPI GGNCC 3 cut(s) 91, 206, 255
PsuI RGATCY 1 cut(s) 508
PsyI GACNNNGTC 2 cut(s) 53, 376
PvuII CAGCTG 1 cut(s) 1019
RsaI GTAC 5 cut(s) 554, 859, 1292, 1359, 1609
RsaNI GTAC 5 cut(s) 553, 858, 1291, 1358, 1608
RseI CAYNNNNRTG 4 cut(s) 1055, 1130, 1175, 1624
SalI GTCGAC 1 cut(s) 220
SaqAI TTAA 2 cut(s) 1370, 1500
SatI GCNGC 6 cut(s) 234, 441, 1020, 1188, 1429, 1539
Sau3AI GATC 8 cut(s) 98, 490, 508, 778, 1059, 1231, 1240, 1351
Sau96I GGNCC 3 cut(s) 91, 206, 255
ScaI AGTACT 1 cut(s) 1292
SchI GAGTC 2 cut(s) 227, 354
ScrFI CCNGG 1 cut(s) 1002
SfaNI GCATC 1 cut(s) 134
SfcI CTRYAG 1 cut(s) 166
SfoI GGCGCC 1 cut(s) 67
SinI GGWCC 3 cut(s) 91, 206, 255
SmiMI CAYNNNNRTG 4 cut(s) 1055, 1130, 1175, 1624
Sse9I AATT 6 cut(s) 544, 639, 741, 794, 1257, 1367
SsiI CCGC 8 cut(s) 111, 123, 152, 233, 236, 299, 456, 1078
SspDI GGCGCC 1 cut(s) 65
SspI AATATT 2 cut(s) 411, 594
SspMI CTAG 6 cut(s) 47, 437, 1307, 1479, 1535, 1605
StyD4I CCNGG 1 cut(s) 1000
StyI CCWWGG 2 cut(s) 981, 1323
TaaI ACNGT 6 cut(s) 170, 210, 226, 376, 586, 948
TaiI ACGT 2 cut(s) 57, 197
TaqI TCGA 3 cut(s) 15, 182, 221
TasI AATT 6 cut(s) 544, 639, 741, 794, 1257, 1367
TatI WGTACW 2 cut(s) 1290, 1607
TauI GCSGC 1 cut(s) 236
TfiI GAWTC 4 cut(s) 184, 302, 758, 1143
Tru1I TTAA 2 cut(s) 1370, 1500
Tru9I TTAA 2 cut(s) 1370, 1500
TscAI CASTG 3 cut(s) 175, 672, 688
TseFI GTSAC 1 cut(s) 226
TseI GCWGC 5 cut(s) 440, 1019, 1187, 1428, 1538
Tsp45I GTSAC 1 cut(s) 226
TspDTI ATGAA 3 cut(s) 121, 1217, 1380
TspRI CASTG 3 cut(s) 175, 672, 688
Tth111I GACNNNGTC 2 cut(s) 53, 376
VpaK11BI GGWCC 3 cut(s) 91, 206, 255
XapI RAATTY 1 cut(s) 639
XceI RCATGY 2 cut(s) 921, 1573
XcmI CCANNNNNNNNNTGG 1 cut(s) 1269
XmiI GTMKAC 4 cut(s) 60, 221, 600, 1333
XspI CTAG 6 cut(s) 47, 437, 1307, 1479, 1535, 1605
ZraI GACGTC 1 cut(s) 55
ZrmI AGTACT 1 cut(s) 1292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.