Rh7BG378300

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000191
Physical Location & Seq
Reverse (-)
40692010 .. 40695488
3479 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG378300.1

Sequence Viewer

Length: 1671 bp
ATGGCTACATCTCTCGAAGAATCTCCGGAGACCCGAACTCCACTCCTAGACGGCGCCGTTGATTACAAAGGCCATCAGGTCCACAGATCAACCTCCGGCGGTTGGCGTTCCGCATCCTTCATAATAGGGGTGGAAGTTGCGGAGAGGTTCGCCTACTGTGGAATAAGCTCGAATCTGATAACGTTTCTGACGGGACCGTTGGGACAGTCGACGGTGACGGCGGCGGAGAATGTGAACATATGGTCCGGAACGGCGCAGTTGCTTCCTCTACTGGGAGCATTCGTGGCGGATTCTTTTCTGGGTCGCTATCGCACCATTATTGTTGCTTCTCTCCTCTACATTTTGGGACTCGGCTTGTTGACCGTGTCGGCCGTTCTTCCTTTTTCTCAGCTTCAAATAGTGTTATTCTTCTTCTCTCTATATCTAGCAGCAGTTGGGCAAGGTGGACACAAGCCCTGTGTTCAGGCTTTCGGGGCAGATCAGTTTGATGGACAAGATCCAGAGGAGTGCAAAGCGAAAAGCTCATTCTTCAATTGGTGGTACTTTGGTATCTGTGCAGGCTCGCTATTCACAGTCTCAATATTGGTCTACATACAGGACAATCTAAGCTGGGGTCTGGGGTTTGGAATTCCTTGTGTTGTGATGGTCCTTGCACTGATTATTTTTGTCGGTGGAACTAGGACATACCGGTATAGCATCAAAGGGGAGGAGGAAAGCCCATTTGTGAGAATTGGCAAGGTTTTTGTTGCTGCATTAAGGAACCGGCGAACTAGTCATTTAGCAGTAGCTTCTGAAGAGGAATCCCGTGGAACCTTGCCTGATCAAAGTTTTGAACAATTCAAGTTCCTCAACAAAGCCTTGCTTGCACCAGATGATTTGGAGAAAAACAGGAAGGTGTGTACCATCGCTGATGTTGAGGAAGCAAAGGCTGTTCTTAGGCTGTTTCCAATATGGGCTACATGCTTGCCATATGCTATTGTATATGCACAGTCCACTACTTTCTTCACCAAGCAAGGTGCCACCATGGACAGAACTATTGTTCCCGGTTTTGACATACCCGCTGCTTCACTTCAGTCATTTATCTGCCTTACCATATTGATGATCATACCCATTTATGACCGCATTTTTGTTCCAATGGCAAGAGCTTTCACCAGAAAAACCTCTGGCATTACAATGCTACAAAGAATCGGAACTGGGATGTTTTTCTCTATCATATCTATGGTCGTTGCAGCTTTAGTTGAGATAAAAAGGCTCCAAACTGCCAAAGATTATGATCTGGTTGATCTGCCAAGTGCCACAATTCCAATGAGTATTTGGTGGTTGGTTCCTCAGTACTTTTTGTATGGACTAGCCGATGTTTTCACCATGGTTGGTCTACAAGAGTTCTTCTACGATCAGGTACCAACTGAATTAAGAAGCATCGGACTTGCCCTCTACCTCAGTATATTTGGTGTGGGAAACTTTCTGAGCAGCTTTCTTATCTCTGTTATTGAGGAAGCAACCAGTTGGGGAGGCCACACTAGCTGGTTTTCCGATAACCTGAATCTTGCACATCTTGATTACTTTTACTGGTTACTAGCAGCACTCAGTGCAGTAGGATTGTTGGCCTACATGTATTTTGCAAAATCTTACATTTATAATAGGGCTAGTACAATATCAACACAAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

556

Amino Acids

61.57

Weight (kDa)

5.78

Isoelectric Point (pI)

41.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 66 - 490 2e-12 Major Facilitator Superfamily
PTR2 PF00854 103 - 509 3.1e-100 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1638
Acc65I GGTACC 1 cut(s) 1399
AccB1I GGYRCC 3 cut(s) 53, 1016, 1399
AccI GTMKAC 3 cut(s) 209, 588, 1375
AccIII TCCGGA 2 cut(s) 25, 245
AciI CCGC 8 cut(s) 99, 111, 140, 221, 224, 287, 1059, 1120
AclI AACGTT 1 cut(s) 182
AclWI GGATC 1 cut(s) 491
AcoI YGGCCR 1 cut(s) 369
AcsI RAATTY 1 cut(s) 627
AcuI CTGAAG 2 cut(s) 813, 1055
AcyI GRCGYC 1 cut(s) 54
AdeI CACNNNGTG 1 cut(s) 1589
AfaI GTAC 5 cut(s) 542, 901, 1334, 1401, 1651
AfiI CCNNNNNNNGG 2 cut(s) 102, 272
AflIII ACRYGT 1 cut(s) 1611
AgeI ACCGGT 1 cut(s) 687
AgsI TTSAA 4 cut(s) 395, 532, 833, 841
AhlI ACTAGT 1 cut(s) 770
AloI GAACNNNNNNTCC 4 cut(s) 227, 259, 1024, 1056
AluBI AGCT 9 cut(s) 168, 391, 522, 609, 788, 1145, 1232, 1473, 1524
AluI AGCT 9 cut(s) 168, 391, 522, 609, 788, 1145, 1232, 1473, 1524
Alw26I GTCTC 2 cut(s) 23, 580
AlwI GGATC 1 cut(s) 491
Aor13HI TCCGGA 2 cut(s) 25, 245
AoxI GGCC 4 cut(s) 70, 369, 1513, 1605
ApeKI GCWGC 6 cut(s) 428, 749, 1061, 1229, 1470, 1580
ApoI RAATTY 1 cut(s) 627
ArsI GACNNNNNNTTYG 2 cut(s) 1109, 1141
AsiGI ACCGGT 1 cut(s) 687
Asp718I GGTACC 1 cut(s) 1399
AspLEI GCGC 2 cut(s) 56, 256
AspS9I GGNCC 4 cut(s) 79, 194, 243, 646
AsuC2I CCSGG 1 cut(s) 1044
AsuHPI GGTGA 4 cut(s) 226, 997, 1141, 1354
AvaII GGWCC 4 cut(s) 79, 194, 243, 646
BaeI ACNNNNGTAYC 4 cut(s) 532, 532, 565, 565
BanI GGYRCC 3 cut(s) 53, 1016, 1399
BbvI GCAGC 6 cut(s) 440, 736, 1048, 1241, 1482, 1592
BccI CCATC 4 cut(s) 81, 482, 637, 911
BceAI ACGGC 5 cut(s) 41, 67, 234, 267, 356
BclI TGATCA 2 cut(s) 820, 1101
BcnI CCSGG 1 cut(s) 1044
BcoDI GTCTC 2 cut(s) 23, 580
BcuI ACTAGT 1 cut(s) 770
BfaI CTAG 8 cut(s) 47, 425, 678, 771, 1349, 1521, 1577, 1647
BfoI RGCGCY 1 cut(s) 57
BisI GCNGC 7 cut(s) 222, 429, 750, 1062, 1230, 1471, 1581
BlsI GCNGC 7 cut(s) 223, 430, 751, 1063, 1231, 1472, 1582
BmcAI AGTACT 1 cut(s) 1334
Bme1390I CCNGG 1 cut(s) 1044
Bme18I GGWCC 4 cut(s) 79, 194, 243, 646
BmgT120I GGNCC 4 cut(s) 79, 194, 243, 646
BmiI GGNNCC 8 cut(s) 55, 195, 761, 811, 1018, 1253, 1326, 1401
BmrFI CCNGG 1 cut(s) 1044
BmrI ACTGGG 2 cut(s) 281, 1203
BmsI GCATC 3 cut(s) 122, 705, 1428
BmuI ACTGGG 2 cut(s) 281, 1203
BpuMI CCSGG 1 cut(s) 1044
BsaBI GATNNNNATC 1 cut(s) 1272
BsaHI GRCGYC 1 cut(s) 54
BsaI GGTCTC 1 cut(s) 23
BsaJI CCNNGG 3 cut(s) 805, 1023, 1365
BsaWI WCCGGW 3 cut(s) 25, 245, 687
BsaXI ACNNNNNCTCC 4 cut(s) 22, 52, 267, 297
Bsc4I CCNNNNNNNGG 2 cut(s) 102, 272
Bse118I RCCGGY 2 cut(s) 687, 762
Bse1I ACTGG 4 cut(s) 276, 1198, 1503, 1574
Bse8I GATNNNNATC 1 cut(s) 1272
BseAI TCCGGA 2 cut(s) 25, 245
BseDI CCNNGG 3 cut(s) 805, 1023, 1365
BseGI GGATG 2 cut(s) 113, 1203
BseJI GATNNNNATC 1 cut(s) 1272
BseLI CCNNNNNNNGG 2 cut(s) 102, 272
BseMII CTCAG 5 cut(s) 401, 1343, 1453, 1457, 1600
BseNI ACTGG 4 cut(s) 276, 1198, 1503, 1574
BseRI GAGGAG 3 cut(s) 323, 518, 722
BseX3I CGGCCG 1 cut(s) 369
BseXI GCAGC 6 cut(s) 440, 736, 1048, 1241, 1482, 1592
BseYI CCCAGC 1 cut(s) 609
BsgI GTGCAG 2 cut(s) 576, 1611
Bsh1285I CGRYCG 1 cut(s) 372
BshFI GGCC 4 cut(s) 72, 371, 1515, 1607
BshNI GGYRCC 3 cut(s) 53, 1016, 1399
BshTI ACCGGT 1 cut(s) 687
BsiEI CGRYCG 1 cut(s) 372
BsiSI CCGG 6 cut(s) 26, 96, 246, 688, 763, 1044
BslFI GGGAC 3 cut(s) 207, 216, 360
BslI CCNNNNNNNGG 2 cut(s) 102, 272
BsmAI GTCTC 2 cut(s) 23, 580
BsmFI GGGAC 3 cut(s) 207, 216, 360
BsmI GAATGC 1 cut(s) 278
BsnI GGCC 4 cut(s) 72, 371, 1515, 1607
Bso31I GGTCTC 1 cut(s) 23
Bsp13I TCCGGA 2 cut(s) 25, 245
Bsp143I GATC 8 cut(s) 86, 478, 496, 820, 1101, 1273, 1282, 1393
Bsp19I CCATGG 2 cut(s) 1023, 1365
BspACI CCGC 8 cut(s) 99, 111, 140, 221, 224, 287, 1059, 1120
BspANI GGCC 4 cut(s) 72, 371, 1515, 1607
BspCNI CTCAG 5 cut(s) 400, 1342, 1452, 1458, 1599
BspEI TCCGGA 2 cut(s) 25, 245
BspLI GGNNCC 8 cut(s) 55, 195, 761, 811, 1018, 1253, 1326, 1401
BspPI GGATC 1 cut(s) 491
BspT107I GGYRCC 3 cut(s) 53, 1016, 1399
BspTNI GGTCTC 1 cut(s) 23
BsrFI RCCGGY 2 cut(s) 687, 762
BsrI ACTGG 4 cut(s) 276, 1198, 1503, 1574
BssAI RCCGGY 2 cut(s) 687, 762
BssECI CCNNGG 3 cut(s) 805, 1023, 1365
BssMI GATC 8 cut(s) 86, 478, 496, 820, 1101, 1273, 1282, 1393
BssNI GRCGYC 1 cut(s) 54
BssT1I CCWWGG 2 cut(s) 1023, 1365
Bst4CI ACNGT 7 cut(s) 158, 198, 207, 214, 364, 574, 990
Bst6I CTCTTC 1 cut(s) 789
BstACI GRCGYC 1 cut(s) 54
BstAPI GCANNNNNTGC 1 cut(s) 1589
BstC8I GCNNGC 4 cut(s) 559, 563, 864, 965
BstDEI CTNAG 7 cut(s) 387, 605, 935, 1329, 1439, 1466, 1586
BstDSI CCRYGG 3 cut(s) 805, 1023, 1365
BstF5I GGATG 2 cut(s) 113, 1203
BstH2I RGCGCY 1 cut(s) 57
BstHHI GCGC 2 cut(s) 56, 256
BstKTI GATC 8 cut(s) 89, 481, 499, 823, 1104, 1276, 1285, 1396
BstMAI GTCTC 2 cut(s) 23, 580
BstMBI GATC 8 cut(s) 86, 478, 496, 820, 1101, 1273, 1282, 1393
BstMCI CGRYCG 1 cut(s) 372
BstMWI GCNNNNNNNGC 5 cut(s) 284, 473, 863, 1521, 1589
BstNSI RCATGY 2 cut(s) 963, 1615
BstSCI CCNGG 1 cut(s) 1042
BstV1I GCAGC 6 cut(s) 440, 736, 1048, 1241, 1482, 1592
BstX2I RGATCY 1 cut(s) 496
BstYI RGATCY 1 cut(s) 496
BstZI CGGCCG 1 cut(s) 369
BsuRI GGCC 4 cut(s) 72, 371, 1515, 1607
BtgI CCRYGG 3 cut(s) 805, 1023, 1365
BtgZI GCGATG 1 cut(s) 889
BtsCI GGATG 2 cut(s) 113, 1203
BtsIMutI CAGTG 2 cut(s) 653, 1594
Cac8I GCNNGC 4 cut(s) 559, 563, 864, 965
CfoI GCGC 2 cut(s) 56, 256
Cfr10I RCCGGY 2 cut(s) 687, 762
Cfr13I GGNCC 4 cut(s) 79, 194, 243, 646
Csp6I GTAC 5 cut(s) 541, 900, 1333, 1400, 1650
CspAI ACCGGT 1 cut(s) 687
CviAII CATG 4 cut(s) 960, 1024, 1366, 1612
CviQI GTAC 5 cut(s) 541, 900, 1333, 1400, 1650
DdeI CTNAG 7 cut(s) 387, 605, 935, 1329, 1439, 1466, 1586
DinI GGCGCC 1 cut(s) 55
DpnI GATC 8 cut(s) 88, 480, 498, 822, 1103, 1275, 1284, 1395
DpnII GATC 8 cut(s) 86, 478, 496, 820, 1101, 1273, 1282, 1393
DraIII CACNNNGTG 1 cut(s) 1589
EaeI YGGCCR 1 cut(s) 369
EagI CGGCCG 1 cut(s) 369
Eam1104I CTCTTC 1 cut(s) 789
EarI CTCTTC 1 cut(s) 789
EciI GGCGGA 2 cut(s) 239, 302
EclXI CGGCCG 1 cut(s) 369
Eco130I CCWWGG 2 cut(s) 1023, 1365
Eco31I GGTCTC 1 cut(s) 23
Eco47I GGWCC 4 cut(s) 79, 194, 243, 646
Eco52I CGGCCG 1 cut(s) 369
Eco57I CTGAAG 2 cut(s) 813, 1055
EcoRI GAATTC 1 cut(s) 627
EcoT14I CCWWGG 2 cut(s) 1023, 1365
EgeI GGCGCC 1 cut(s) 55
EheI GGCGCC 1 cut(s) 55
ErhI CCWWGG 2 cut(s) 1023, 1365
FaeI CATG 4 cut(s) 963, 1027, 1369, 1615
FalI AAGNNNNNCTT 2 cut(s) 846, 878
FaqI GGGAC 3 cut(s) 207, 216, 360
FatI CATG 4 cut(s) 959, 1023, 1365, 1611
FauI CCCGC 1 cut(s) 1066
FauNDI CATATG 2 cut(s) 239, 970
FbaI TGATCA 2 cut(s) 820, 1101
FblI GTMKAC 3 cut(s) 209, 588, 1375
Fnu4HI GCNGC 7 cut(s) 222, 429, 750, 1062, 1230, 1471, 1581
FokI GGATG 2 cut(s) 100, 1210
Fsp4HI GCNGC 7 cut(s) 222, 429, 750, 1062, 1230, 1471, 1581
FspBI CTAG 8 cut(s) 47, 425, 678, 771, 1349, 1521, 1577, 1647
GlaI GCGC 2 cut(s) 55, 255
GluI GCNGC 7 cut(s) 222, 429, 750, 1062, 1230, 1471, 1581
GsaI CCCAGC 1 cut(s) 613
HaeII RGCGCY 1 cut(s) 57
HaeIII GGCC 4 cut(s) 72, 371, 1515, 1607
HapII CCGG 6 cut(s) 26, 96, 246, 688, 763, 1044
HhaI GCGC 2 cut(s) 56, 256
Hin1I GRCGYC 1 cut(s) 54
Hin1II CATG 4 cut(s) 963, 1027, 1369, 1615
Hin6I GCGC 2 cut(s) 54, 254
HinP1I GCGC 2 cut(s) 54, 254
HincII GTYRAC 2 cut(s) 210, 360
HindII GTYRAC 2 cut(s) 210, 360
HinfI GANTC 7 cut(s) 20, 172, 290, 348, 800, 1185, 1543
HpaII CCGG 6 cut(s) 26, 96, 246, 688, 763, 1044
HphI GGTGA 4 cut(s) 226, 997, 1141, 1354
Hpy166II GTNNAC 9 cut(s) 82, 210, 235, 360, 446, 589, 900, 993, 1376
Hpy188I TCNGA 7 cut(s) 177, 189, 793, 1190, 1424, 1467, 1534
Hpy188III TCNNGA 5 cut(s) 14, 26, 246, 500, 1556
Hpy8I GTNNAC 9 cut(s) 82, 210, 235, 360, 446, 589, 900, 993, 1376
Hpy99I CGWCG 1 cut(s) 214
HpyAV CCTTC 2 cut(s) 127, 886
HpyCH4III ACNGT 7 cut(s) 158, 198, 207, 214, 364, 574, 990
HpyCH4IV ACGT 1 cut(s) 182
HpyF10VI GCNNNNNNNGC 5 cut(s) 284, 473, 863, 1521, 1589
HpyF3I CTNAG 7 cut(s) 387, 605, 935, 1329, 1439, 1466, 1586
HpySE526I ACGT 1 cut(s) 182
Hsp92I GRCGYC 1 cut(s) 54
Hsp92II CATG 4 cut(s) 963, 1027, 1369, 1615
HspAI GCGC 2 cut(s) 54, 254
KasI GGCGCC 1 cut(s) 53
Kpn2I TCCGGA 2 cut(s) 25, 245
KpnI GGTACC 1 cut(s) 1403
Ksp22I TGATCA 2 cut(s) 820, 1101
Kzo9I GATC 8 cut(s) 86, 478, 496, 820, 1101, 1273, 1282, 1393
LmnI GCTCC 2 cut(s) 275, 1257
Lsp1109I GCAGC 6 cut(s) 440, 736, 1048, 1241, 1482, 1592
LweI GCATC 3 cut(s) 122, 705, 1428
MaeI CTAG 8 cut(s) 47, 425, 678, 771, 1349, 1521, 1577, 1647
MaeII ACGT 1 cut(s) 182
MaeIII GTNAC 2 cut(s) 214, 1572
MalI GATC 8 cut(s) 88, 480, 498, 822, 1103, 1275, 1284, 1395
MboI GATC 8 cut(s) 86, 478, 496, 820, 1101, 1273, 1282, 1393
MboII GAAGA 8 cut(s) 29, 368, 400, 403, 520, 806, 994, 1378
MfeI CAATTG 1 cut(s) 532
MflI RGATCY 1 cut(s) 496
MluCI AATT 6 cut(s) 532, 627, 729, 836, 1299, 1409
Mly113I GGCGCC 1 cut(s) 54
MlyI GAGTC 1 cut(s) 342
MroI TCCGGA 2 cut(s) 25, 245
MseI TTAA 2 cut(s) 755, 1412
MslI CAYNNNNRTG 4 cut(s) 1097, 1172, 1217, 1666
MspA1I CMGCKG 1 cut(s) 1061
MspI CCGG 6 cut(s) 26, 96, 246, 688, 763, 1044
MspR9I CCNGG 1 cut(s) 1044
MunI CAATTG 1 cut(s) 532
Mva1269I GAATGC 1 cut(s) 278
MwoI GCNNNNNNNGC 5 cut(s) 284, 473, 863, 1521, 1589
NarI GGCGCC 1 cut(s) 54
NciI CCSGG 1 cut(s) 1044
NcoI CCATGG 2 cut(s) 1023, 1365
NdeI CATATG 2 cut(s) 239, 970
NdeII GATC 8 cut(s) 86, 478, 496, 820, 1101, 1273, 1282, 1393
NlaIII CATG 4 cut(s) 963, 1027, 1369, 1615
NlaIV GGNNCC 8 cut(s) 55, 195, 761, 811, 1018, 1253, 1326, 1401
NmeAIII GCCGAG 1 cut(s) 330
NmuCI GTSAC 1 cut(s) 214
NspI RCATGY 2 cut(s) 963, 1615
PciI ACATGT 1 cut(s) 1611
PctI GAATGC 1 cut(s) 278
PfeI GAWTC 6 cut(s) 20, 172, 290, 800, 1185, 1543
PflFI GACNNNGTC 1 cut(s) 364
PinAI ACCGGT 1 cut(s) 687
PkrI GCNGC 7 cut(s) 223, 430, 751, 1063, 1231, 1472, 1582
PleI GAGTC 1 cut(s) 342
PluTI GGCGCC 1 cut(s) 57
PpsI GAGTC 1 cut(s) 342
PscI ACATGT 1 cut(s) 1611
PsiI TTATAA 1 cut(s) 1638
Psp1406I AACGTT 1 cut(s) 182
PspFI CCCAGC 1 cut(s) 609
PspN4I GGNNCC 8 cut(s) 55, 195, 761, 811, 1018, 1253, 1326, 1401
PspPI GGNCC 4 cut(s) 79, 194, 243, 646
PsuI RGATCY 1 cut(s) 496
PsyI GACNNNGTC 1 cut(s) 364
RsaI GTAC 5 cut(s) 542, 901, 1334, 1401, 1651
RsaNI GTAC 5 cut(s) 541, 900, 1333, 1400, 1650
RseI CAYNNNNRTG 4 cut(s) 1097, 1172, 1217, 1666
SalI GTCGAC 1 cut(s) 208
SaqAI TTAA 2 cut(s) 755, 1412
SatI GCNGC 7 cut(s) 222, 429, 750, 1062, 1230, 1471, 1581
Sau3AI GATC 8 cut(s) 86, 478, 496, 820, 1101, 1273, 1282, 1393
Sau96I GGNCC 4 cut(s) 79, 194, 243, 646
ScaI AGTACT 1 cut(s) 1334
SchI GAGTC 1 cut(s) 342
ScrFI CCNGG 1 cut(s) 1044
SfaNI GCATC 3 cut(s) 122, 705, 1428
SfoI GGCGCC 1 cut(s) 55
SinI GGWCC 4 cut(s) 79, 194, 243, 646
SmiMI CAYNNNNRTG 4 cut(s) 1097, 1172, 1217, 1666
SpeI ACTAGT 1 cut(s) 770
Sse9I AATT 6 cut(s) 532, 627, 729, 836, 1299, 1409
SsiI CCGC 8 cut(s) 99, 111, 140, 221, 224, 287, 1059, 1120
SspDI GGCGCC 1 cut(s) 53
SspI AATATT 1 cut(s) 582
SspMI CTAG 8 cut(s) 47, 425, 678, 771, 1349, 1521, 1577, 1647
StyD4I CCNGG 1 cut(s) 1042
StyI CCWWGG 2 cut(s) 1023, 1365
TaaI ACNGT 7 cut(s) 158, 198, 207, 214, 364, 574, 990
TaiI ACGT 1 cut(s) 185
TaqI TCGA 3 cut(s) 15, 170, 209
TasI AATT 6 cut(s) 532, 627, 729, 836, 1299, 1409
TatI WGTACW 2 cut(s) 1332, 1649
TauI GCSGC 1 cut(s) 224
TfiI GAWTC 6 cut(s) 20, 172, 290, 800, 1185, 1543
Tru1I TTAA 2 cut(s) 755, 1412
Tru9I TTAA 2 cut(s) 755, 1412
TscAI CASTG 2 cut(s) 660, 1594
TseFI GTSAC 1 cut(s) 214
TseI GCWGC 6 cut(s) 428, 749, 1061, 1229, 1470, 1580
Tsp45I GTSAC 1 cut(s) 214
TspDTI ATGAA 1 cut(s) 109
TspRI CASTG 2 cut(s) 660, 1594
Tth111I GACNNNGTC 1 cut(s) 364
VpaK11BI GGWCC 4 cut(s) 79, 194, 243, 646
XapI RAATTY 1 cut(s) 627
XceI RCATGY 2 cut(s) 963, 1615
XcmI CCANNNNNNNNNTGG 1 cut(s) 1311
XmiI GTMKAC 3 cut(s) 209, 588, 1375
XspI CTAG 8 cut(s) 47, 425, 678, 771, 1349, 1521, 1577, 1647
ZrmI AGTACT 1 cut(s) 1334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.