Rh7BG377800

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000191
Physical Location & Seq
Reverse (-)
40634037 .. 40651448
17412 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG377800.1

Sequence Viewer

Length: 1713 bp
ATGGAGTTAAATAGACCTAATTTGGTGTACGCAATATCTCTTCCATTTCAGTTTTCACAGCCACCGGCGCCAATGGCCACTTTTCCGGAGAGCCAAACTCCACTGTTCGACGACGTTGTGGGCCATCCGGTCCGCAGATCAAGTTCAGGCGGTTGGCCTTCCGCGTCGTTCATAATATGGGTGGAGGTTGCGGAGAGGCTTGCGTACTATGGAATCAGCTCCAACCTTATTTCGTTTCTGACCGGGCCTCTCGGACAGTCGACGGCCACGGCGGCGGAGAACGTCAACATATGGTCCGGAACAGCGTTCTTGTTTCCTCTATTGGGAGCGTTCGTGGAAGATTCTTTTCTCGGTCGTTACCGCACCATCATTGCCGCTTCTGTCATCTACGTCATGGTCCGGTCTTGCCTTGCTGACTGTGTCAGCCGTGCTTACGTCTTCTCAGCTTCAAGTATTATTGTTCTTTTTCTCTCTATATTTGTAGCAGTTGGGCAAGGTGGACACAAGCCCTGTGTTCAGGCTTTCGGAGCAGATCAGTTCGATAGACACAATCCAGAGGAGAGCAAAGCGAAAAGCTCATTTTTCAATTGGTGGTATCTTAGTATGTGTGTAGGCCCCATGATTACCTTTCCAGTATTAGCCTACATACAGGACAACCTGAGTTGGGGTCTGGGTTTTGGTCTTCCTTGCATTGTGATGGTCCTTGCACTGCTTATCTTCCTTCTTGGAACAAGAACGTACCGGTATAGTATCAAAGGGGATGAGGACAGCCCATTTGTGAGAATTGGCAAGGTGTTTGCTGTTGCATTAAGGAATTGGCGAACTACTCCTTCAGCAATAGCTTCAGAAGAGGAATCTCATGGAACCCTGTCTCACCAAAGTTCTCAACAATTCAAATTGCTCAACAAAGCCTTGCTTGCACCGGATGATTTGAAGGAAAATGGGAAAGTGTGTACCATCGCTGAGGTTGAAGAAGCAAAAGCCGTTCTTAGGCTGTTTCCTATATGGGTTACATGCTTGCCATATGCCATTGTGTTTGCACAGTTCTCGACTTTTTTCACTAAGCAAGGTGCCACCATGGACAGAACAATTGTGCCAGGTTTTGATATACCAGCTGCTTCACTTCAGTCGTTTATCGGCATTGCCACTATTATATTCATTCCCATTTATGATCGCATATTTGTTCCAATAGCAAGAGCTTTCACTAGAGAACCCTCTGGCATTACAATGCTACGAAGAATTGGAACTGGGATGTTTATATCTATTATTTCCATGGTAGTTGCAGCTTTAGTTGAGATGCAAAGGGTCCAAACTGCTAAAGACTATAATCTGGTTGATAAGCCAAGTGCCACAGTTCCAATGAGTGTTTGGTGGTTAGGTCCTCAGTACTTGTTAATTGGACTGGCCGATGTTTTCACTATGGTTGGTCTGCAAGAGTTCTTCTACGATCAGGTACCAAATGAATTAAGAAGCGTAGGACTTGCCCTCTACCTCAGTATATTTGGTGTGGGAAGCTTTCTGAGCAGCTTTCTTATCTCTGTTATTGAGGAAGCAACCAGTTGGGCAGGTCACACTAGCTGGTTTTCCAATAACCTCAATCGTGCACATCTCGATTACTTCTATTGGTTACTTGTAGCAGTCAATGCAGTAGGATTGGTGGTCTACATGTATTTCGCAAAATCGTACATATATAATAGGGGTAGTACAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

570

Amino Acids

63.23

Weight (kDa)

6.41

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 67 - 508 9.1e-16 Major Facilitator Superfamily
PTR2 PF00854 120 - 527 4.3e-88 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1556
Acc65I GGTACC 1 cut(s) 1453
AccB1I GGYRCC 3 cut(s) 67, 1070, 1453
AccI GTMKAC 2 cut(s) 260, 1662
AccII CGCG 1 cut(s) 164
AccIII TCCGGA 2 cut(s) 85, 296
AciI CCGC 8 cut(s) 133, 150, 162, 191, 272, 275, 361, 375
AcoI YGGCCR 3 cut(s) 75, 264, 1404
AcuI CTGAAG 3 cut(s) 816, 828, 1109
AcyI GRCGYC 1 cut(s) 68
AfaI GTAC 8 cut(s) 29, 206, 740, 955, 1388, 1455, 1685, 1705
AfiI CCNNNNNNNGG 3 cut(s) 323, 664, 990
AflIII ACRYGT 1 cut(s) 1665
AgeI ACCGGT 1 cut(s) 741
AgsI TTSAA 5 cut(s) 450, 586, 895, 934, 971
AjnI CCWGG 1 cut(s) 1096
Alw21I GWGCWC 1 cut(s) 1606
Alw26I GTCTC 1 cut(s) 876
Alw44I GTGCAC 1 cut(s) 1602
Aor13HI TCCGGA 2 cut(s) 85, 296
AoxI GGCC 7 cut(s) 75, 121, 155, 245, 264, 613, 1404
ApaLI GTGCAC 1 cut(s) 1602
ApeKI GCWGC 3 cut(s) 1115, 1283, 1524
ArsI GACNNNNNNTTYG 2 cut(s) 758, 790
AsiGI ACCGGT 1 cut(s) 741
Asp718I GGTACC 1 cut(s) 1453
AspLEI GCGC 1 cut(s) 70
AspS9I GGNCC 9 cut(s) 121, 130, 245, 294, 397, 614, 700, 1306, 1379
AsuC2I CCSGG 1 cut(s) 244
AsuHPI GGTGA 1 cut(s) 866
AvaII GGWCC 6 cut(s) 130, 294, 397, 700, 1306, 1379
BaeGI GKGCMC 1 cut(s) 1606
BalI TGGCCA 1 cut(s) 77
BanI GGYRCC 3 cut(s) 67, 1070, 1453
BbsI GAAGAC 2 cut(s) 430, 674
Bbv12I GWGCWC 1 cut(s) 1606
BbvCI CCTCAGC 1 cut(s) 963
BbvI GCAGC 3 cut(s) 1102, 1295, 1536
BccI CCATC 4 cut(s) 132, 374, 691, 965
BceAI ACGGC 4 cut(s) 279, 285, 411, 968
BcgI CGANNNNNNTGC 2 cut(s) 1029, 1063
BciT130I CCWGG 1 cut(s) 1098
BcnI CCSGG 1 cut(s) 244
BcoDI GTCTC 1 cut(s) 876
BfaI CTAG 2 cut(s) 1206, 1575
BfoI RGCGCY 1 cut(s) 71
BfuAI ACCTGC 1 cut(s) 1556
BglI GCCNNNNNGGC 1 cut(s) 272
BisI GCNGC 5 cut(s) 273, 375, 1116, 1284, 1525
BlsI GCNGC 5 cut(s) 274, 376, 1117, 1285, 1526
BmcAI AGTACT 1 cut(s) 1388
Bme1390I CCNGG 2 cut(s) 244, 1098
Bme18I GGWCC 6 cut(s) 130, 294, 397, 700, 1306, 1379
BmgT120I GGNCC 9 cut(s) 121, 130, 245, 294, 397, 614, 700, 1306, 1379
BmiI GGNNCC 6 cut(s) 69, 616, 865, 1072, 1307, 1455
BmrFI CCNGG 2 cut(s) 244, 1098
BmrI ACTGGG 1 cut(s) 1257
BmsI GCATC 1 cut(s) 1287
BmuI ACTGGG 1 cut(s) 1257
BpiI GAAGAC 2 cut(s) 430, 674
BplI GAGNNNNNCTC 2 cut(s) 82, 114
Bpu10I CCTNAGC 1 cut(s) 963
BpuMI CCSGG 1 cut(s) 244
BsaHI GRCGYC 1 cut(s) 68
BsaJI CCNNGG 3 cut(s) 267, 1077, 1272
BsaWI WCCGGW 6 cut(s) 85, 127, 296, 399, 741, 922
BsaXI ACNNNNNCTCC 2 cut(s) 318, 348
Bsc4I CCNNNNNNNGG 3 cut(s) 323, 664, 990
Bse118I RCCGGY 2 cut(s) 64, 741
Bse1I ACTGG 4 cut(s) 632, 1252, 1407, 1557
Bse3DI GCAATG 2 cut(s) 369, 1140
BseAI TCCGGA 2 cut(s) 85, 296
BseBI CCWGG 1 cut(s) 1098
BseDI CCNNGG 3 cut(s) 267, 1077, 1272
BseGI GGATG 4 cut(s) 124, 766, 931, 1257
BseLI CCNNNNNNNGG 3 cut(s) 323, 664, 990
BseMI GCAATG 2 cut(s) 369, 1140
BseMII CTCAG 6 cut(s) 456, 650, 954, 1397, 1507, 1511
BseNI ACTGG 4 cut(s) 632, 1252, 1407, 1557
BseRI GAGGAG 1 cut(s) 572
BseSI GKGCMC 1 cut(s) 1606
BseXI GCAGC 3 cut(s) 1102, 1295, 1536
Bsh1236I CGCG 1 cut(s) 164
Bsh1285I CGRYCG 1 cut(s) 355
BshFI GGCC 7 cut(s) 77, 123, 157, 247, 266, 615, 1406
BshNI GGYRCC 3 cut(s) 67, 1070, 1453
BshTI ACCGGT 1 cut(s) 741
BsiEI CGRYCG 1 cut(s) 355
BsiHKAI GWGCWC 1 cut(s) 1606
BsiSI CCGG 8 cut(s) 65, 86, 128, 243, 297, 400, 742, 923
BslI CCNNNNNNNGG 3 cut(s) 323, 664, 990
BsmAI GTCTC 1 cut(s) 876
BsnI GGCC 7 cut(s) 77, 123, 157, 247, 266, 615, 1406
Bsp1286I GDGCHC 1 cut(s) 1606
Bsp13I TCCGGA 2 cut(s) 85, 296
Bsp143I GATC 4 cut(s) 137, 532, 1171, 1447
Bsp19I CCATGG 2 cut(s) 1077, 1272
BspACI CCGC 8 cut(s) 133, 150, 162, 191, 272, 275, 361, 375
BspANI GGCC 7 cut(s) 77, 123, 157, 247, 266, 615, 1406
BspCNI CTCAG 6 cut(s) 455, 651, 955, 1396, 1506, 1512
BspEI TCCGGA 2 cut(s) 85, 296
BspFNI CGCG 1 cut(s) 164
BspLI GGNNCC 6 cut(s) 69, 616, 865, 1072, 1307, 1455
BspMI ACCTGC 1 cut(s) 1556
BspT107I GGYRCC 3 cut(s) 67, 1070, 1453
BsrDI GCAATG 2 cut(s) 369, 1140
BsrFI RCCGGY 2 cut(s) 64, 741
BsrI ACTGG 4 cut(s) 632, 1252, 1407, 1557
BssAI RCCGGY 2 cut(s) 64, 741
BssECI CCNNGG 3 cut(s) 267, 1077, 1272
BssMI GATC 4 cut(s) 137, 532, 1171, 1447
BssNI GRCGYC 1 cut(s) 68
BssT1I CCWWGG 2 cut(s) 1077, 1272
Bst2UI CCWGG 1 cut(s) 1098
Bst4CI ACNGT 5 cut(s) 105, 258, 419, 1044, 1354
Bst6I CTCTTC 2 cut(s) 45, 843
BstACI GRCGYC 1 cut(s) 68
BstAPI GCANNNNNTGC 1 cut(s) 1643
BstC8I GCNNGC 3 cut(s) 201, 918, 1019
BstDEI CTNAG 9 cut(s) 442, 599, 659, 963, 989, 1062, 1383, 1493, 1520
BstDSI CCRYGG 3 cut(s) 267, 1077, 1272
BstF5I GGATG 4 cut(s) 124, 766, 931, 1257
BstFNI CGCG 1 cut(s) 164
BstH2I RGCGCY 1 cut(s) 71
BstHHI GCGC 1 cut(s) 70
BstKTI GATC 4 cut(s) 140, 535, 1174, 1450
BstMAI GTCTC 1 cut(s) 876
BstMBI GATC 4 cut(s) 137, 532, 1171, 1447
BstMCI CGRYCG 1 cut(s) 355
BstMWI GCNNNNNNNGC 7 cut(s) 67, 74, 272, 527, 917, 1521, 1643
BstNI CCWGG 1 cut(s) 1098
BstNSI RCATGY 2 cut(s) 1017, 1669
BstSCI CCNGG 2 cut(s) 242, 1096
BstSLI GKGCMC 1 cut(s) 1606
BstUI CGCG 1 cut(s) 164
BstV1I GCAGC 3 cut(s) 1102, 1295, 1536
BstV2I GAAGAC 2 cut(s) 430, 674
BsuRI GGCC 7 cut(s) 77, 123, 157, 247, 266, 615, 1406
BtgI CCRYGG 3 cut(s) 267, 1077, 1272
BtgZI GCGATG 1 cut(s) 943
BtsCI GGATG 4 cut(s) 124, 766, 931, 1257
BtsI GCAGTG 1 cut(s) 707
BtsIMutI CAGTG 2 cut(s) 101, 707
BveI ACCTGC 1 cut(s) 1556
Cac8I GCNNGC 3 cut(s) 201, 918, 1019
CfoI GCGC 1 cut(s) 70
Cfr10I RCCGGY 2 cut(s) 64, 741
Cfr13I GGNCC 9 cut(s) 121, 130, 245, 294, 397, 614, 700, 1306, 1379
CpoI CGGWCCG 1 cut(s) 130
CseI GACGC 1 cut(s) 153
Csp6I GTAC 8 cut(s) 28, 205, 739, 954, 1387, 1454, 1684, 1704
CspAI ACCGGT 1 cut(s) 741
CspI CGGWCCG 1 cut(s) 130
CviAII CATG 7 cut(s) 394, 619, 860, 1014, 1078, 1273, 1666
CviQI GTAC 8 cut(s) 28, 205, 739, 954, 1387, 1454, 1684, 1704
DdeI CTNAG 9 cut(s) 442, 599, 659, 963, 989, 1062, 1383, 1493, 1520
DinI GGCGCC 1 cut(s) 69
DpnI GATC 4 cut(s) 139, 534, 1173, 1449
DpnII GATC 4 cut(s) 137, 532, 1171, 1447
EaeI YGGCCR 3 cut(s) 75, 264, 1404
Eam1104I CTCTTC 2 cut(s) 45, 843
EarI CTCTTC 2 cut(s) 45, 843
EciI GGCGGA 1 cut(s) 290
Eco130I CCWWGG 2 cut(s) 1077, 1272
Eco47I GGWCC 6 cut(s) 130, 294, 397, 700, 1306, 1379
Eco57I CTGAAG 3 cut(s) 816, 828, 1109
EcoO109I RGGNCCY 2 cut(s) 614, 1379
EcoRII CCWGG 1 cut(s) 1096
EcoT14I CCWWGG 2 cut(s) 1077, 1272
EgeI GGCGCC 1 cut(s) 69
EheI GGCGCC 1 cut(s) 69
ErhI CCWWGG 2 cut(s) 1077, 1272
FaeI CATG 7 cut(s) 397, 622, 863, 1017, 1081, 1276, 1669
FalI AAGNNNNNCTT 4 cut(s) 900, 932, 972, 1004
FatI CATG 7 cut(s) 393, 618, 859, 1013, 1077, 1272, 1665
FauNDI CATATG 2 cut(s) 290, 1024
FblI GTMKAC 2 cut(s) 260, 1662
Fnu4HI GCNGC 5 cut(s) 273, 375, 1116, 1284, 1525
FokI GGATG 4 cut(s) 111, 773, 938, 1264
Fsp4HI GCNGC 5 cut(s) 273, 375, 1116, 1284, 1525
FspBI CTAG 2 cut(s) 1206, 1575
GlaI GCGC 1 cut(s) 69
GluI GCNGC 5 cut(s) 273, 375, 1116, 1284, 1525
HaeII RGCGCY 1 cut(s) 71
HaeIII GGCC 7 cut(s) 77, 123, 157, 247, 266, 615, 1406
HapII CCGG 8 cut(s) 65, 86, 128, 243, 297, 400, 742, 923
HgaI GACGC 1 cut(s) 153
HhaI GCGC 1 cut(s) 70
Hin1I GRCGYC 1 cut(s) 68
Hin1II CATG 7 cut(s) 397, 622, 863, 1017, 1081, 1276, 1669
Hin6I GCGC 1 cut(s) 68
HinP1I GCGC 1 cut(s) 68
HincII GTYRAC 2 cut(s) 261, 286
HindII GTYRAC 2 cut(s) 261, 286
HindIII AAGCTT 1 cut(s) 1513
HinfI GANTC 3 cut(s) 213, 341, 854
HpaII CCGG 8 cut(s) 65, 86, 128, 243, 297, 400, 742, 923
HphI GGTGA 1 cut(s) 866
Hpy166II GTNNAC 7 cut(s) 28, 261, 286, 500, 954, 1604, 1663
Hpy188I TCNGA 5 cut(s) 240, 254, 527, 847, 1521
Hpy188III TCNNGA 5 cut(s) 86, 297, 554, 1048, 1610
Hpy8I GTNNAC 7 cut(s) 28, 261, 286, 500, 954, 1604, 1663
Hpy99I CGWCG 4 cut(s) 113, 116, 169, 265
HpyAV CCTTC 4 cut(s) 168, 731, 840, 928
HpyCH4III ACNGT 5 cut(s) 105, 258, 419, 1044, 1354
HpyCH4IV ACGT 5 cut(s) 114, 282, 390, 435, 737
HpyF10VI GCNNNNNNNGC 7 cut(s) 67, 74, 272, 527, 917, 1521, 1643
HpyF3I CTNAG 9 cut(s) 442, 599, 659, 963, 989, 1062, 1383, 1493, 1520
HpySE526I ACGT 5 cut(s) 114, 282, 390, 435, 737
Hsp92I GRCGYC 1 cut(s) 68
Hsp92II CATG 7 cut(s) 397, 622, 863, 1017, 1081, 1276, 1669
HspAI GCGC 1 cut(s) 68
KasI GGCGCC 1 cut(s) 67
Kpn2I TCCGGA 2 cut(s) 85, 296
KpnI GGTACC 1 cut(s) 1457
Kzo9I GATC 4 cut(s) 137, 532, 1171, 1447
LmnI GCTCC 3 cut(s) 224, 326, 527
Lsp1109I GCAGC 3 cut(s) 1102, 1295, 1536
LweI GCATC 1 cut(s) 1287
MaeI CTAG 2 cut(s) 1206, 1575
MaeII ACGT 5 cut(s) 114, 282, 390, 435, 737
MaeIII GTNAC 4 cut(s) 356, 1009, 1568, 1626
MalI GATC 4 cut(s) 139, 534, 1173, 1449
MboI GATC 4 cut(s) 137, 532, 1171, 1447
MboII GAAGA 9 cut(s) 32, 350, 430, 674, 709, 860, 983, 1248, 1432
MfeI CAATTG 2 cut(s) 586, 1089
MhlI GDGCHC 1 cut(s) 1606
MlsI TGGCCA 1 cut(s) 77
MluNI TGGCCA 1 cut(s) 77
Mly113I GGCGCC 1 cut(s) 68
MmeI TCCRAC 1 cut(s) 246
Mox20I TGGCCA 1 cut(s) 77
MroI TCCGGA 2 cut(s) 85, 296
MscI TGGCCA 1 cut(s) 77
MseI TTAA 4 cut(s) 8, 809, 1394, 1466
MslI CAYNNNNRTG 2 cut(s) 695, 1226
Msp20I TGGCCA 1 cut(s) 77
MspA1I CMGCKG 1 cut(s) 1115
MspI CCGG 8 cut(s) 65, 86, 128, 243, 297, 400, 742, 923
MspR9I CCNGG 2 cut(s) 244, 1098
MunI CAATTG 2 cut(s) 586, 1089
MvaI CCWGG 1 cut(s) 1098
MvnI CGCG 1 cut(s) 164
MwoI GCNNNNNNNGC 7 cut(s) 67, 74, 272, 527, 917, 1521, 1643
NarI GGCGCC 1 cut(s) 68
NciI CCSGG 1 cut(s) 244
NcoI CCATGG 2 cut(s) 1077, 1272
NdeI CATATG 2 cut(s) 290, 1024
NdeII GATC 4 cut(s) 137, 532, 1171, 1447
NlaIII CATG 7 cut(s) 397, 622, 863, 1017, 1081, 1276, 1669
NlaIV GGNNCC 6 cut(s) 69, 616, 865, 1072, 1307, 1455
NmuCI GTSAC 1 cut(s) 1568
NspI RCATGY 2 cut(s) 1017, 1669
PciI ACATGT 1 cut(s) 1665
PfeI GAWTC 3 cut(s) 213, 341, 854
PflFI GACNNNGTC 1 cut(s) 419
PinAI ACCGGT 1 cut(s) 741
PkrI GCNGC 5 cut(s) 274, 376, 1117, 1285, 1526
PluTI GGCGCC 1 cut(s) 71
PpuMI RGGWCCY 1 cut(s) 1379
PscI ACATGT 1 cut(s) 1665
Psp5II RGGWCCY 1 cut(s) 1379
Psp6I CCWGG 1 cut(s) 1096
PspGI CCWGG 1 cut(s) 1096
PspN4I GGNNCC 6 cut(s) 69, 616, 865, 1072, 1307, 1455
PspPI GGNCC 9 cut(s) 121, 130, 245, 294, 397, 614, 700, 1306, 1379
PspPPI RGGWCCY 1 cut(s) 1379
PsyI GACNNNGTC 1 cut(s) 419
PvuII CAGCTG 1 cut(s) 1115
RsaI GTAC 8 cut(s) 29, 206, 740, 955, 1388, 1455, 1685, 1705
RsaNI GTAC 8 cut(s) 28, 205, 739, 954, 1387, 1454, 1684, 1704
RseI CAYNNNNRTG 2 cut(s) 695, 1226
Rsr2I CGGWCCG 1 cut(s) 130
RsrII CGGWCCG 1 cut(s) 130
SalI GTCGAC 1 cut(s) 259
SaqAI TTAA 4 cut(s) 8, 809, 1394, 1466
SatI GCNGC 5 cut(s) 273, 375, 1116, 1284, 1525
Sau3AI GATC 4 cut(s) 137, 532, 1171, 1447
Sau96I GGNCC 9 cut(s) 121, 130, 245, 294, 397, 614, 700, 1306, 1379
ScaI AGTACT 1 cut(s) 1388
ScrFI CCNGG 2 cut(s) 244, 1098
SduI GDGCHC 1 cut(s) 1606
SfaNI GCATC 1 cut(s) 1287
SfoI GGCGCC 1 cut(s) 69
SgrAI CRCCGGYG 1 cut(s) 64
SinI GGWCC 6 cut(s) 130, 294, 397, 700, 1306, 1379
SmiMI CAYNNNNRTG 2 cut(s) 695, 1226
SsiI CCGC 8 cut(s) 133, 150, 162, 191, 272, 275, 361, 375
SspDI GGCGCC 1 cut(s) 67
SspMI CTAG 2 cut(s) 1206, 1575
StyD4I CCNGG 2 cut(s) 242, 1096
StyI CCWWGG 2 cut(s) 1077, 1272
TaaI ACNGT 5 cut(s) 105, 258, 419, 1044, 1354
TaiI ACGT 5 cut(s) 117, 285, 393, 438, 740
TaqI TCGA 5 cut(s) 108, 260, 540, 1049, 1611
TaqII GACCGA 1 cut(s) 341
TatI WGTACW 2 cut(s) 1386, 1703
TauI GCSGC 2 cut(s) 275, 377
TfiI GAWTC 3 cut(s) 213, 341, 854
Tru1I TTAA 4 cut(s) 8, 809, 1394, 1466
Tru9I TTAA 4 cut(s) 8, 809, 1394, 1466
TscAI CASTG 2 cut(s) 108, 714
TseFI GTSAC 1 cut(s) 1568
TseI GCWGC 3 cut(s) 1115, 1283, 1524
Tsp45I GTSAC 1 cut(s) 1568
TspDTI ATGAA 3 cut(s) 160, 1147, 1476
TspRI CASTG 2 cut(s) 108, 714
Tth111I GACNNNGTC 1 cut(s) 419
VneI GTGCAC 1 cut(s) 1602
VpaK11BI GGWCC 6 cut(s) 130, 294, 397, 700, 1306, 1379
XceI RCATGY 2 cut(s) 1017, 1669
XcmI CCANNNNNNNNNTGG 1 cut(s) 1365
XmiI GTMKAC 2 cut(s) 260, 1662
XspI CTAG 2 cut(s) 1206, 1575
ZrmI AGTACT 1 cut(s) 1388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.