RLG00000001629

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000191
Physical Location & Seq
Forward (+)
18493495 .. 18496537
3043 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001629

Sequence Viewer

Length: 1704 bp
ATGGCCACTTCTCCGGAGACCCAAACTCCGCTACTAGACGACGTCGTGGAGGGCGCCGTTGACTGCAACGGCCATCCGGTCCGCAGATCCAGCTCCGGCGGTTGGCGTTCCGCATCTTTCATAATATGGGTGGAGGTTGCGGAGAGGGTTGCCTACTATGGAATCAGCTCCAACCTCATATCGTTTCTGACCGGGCCTATGGGACAGTCCACGGCCACGGCGGCCGAGAACGTCAACATATGGTCTGGAACGGCGTCGTTGCTTCCTCTATTGGGAGCCTTCGTCGCTGATTCTTTCCTGGGTCGCTACCGCACCATTATTGCCGCTTCTGTCCTCTACATCGGGGGTCTTGGGTTGCTGACTGTGTCGGCCGTGCTTCCTTCTTCTCAGCTTCAAGTATTATTATTCTTTTTTTCTCTATATTTAGTAGCAGTTGGGCAAGGTGGACACAAGCCTTGTGTTCAGGCTTTCGGAGCAGATCAGTTTGATAGACAAGATCCAGAGGAGTGCAAAGCAAAAAGCTCATTCTTCAATTGGTGGTATTTTGGTATATGTGCTGGCCCCTTATTGACACTTACAGTATTAGACTACATACAGGACAATCTTAGTTGGGGTCTGGGTTTTGGTCTTCCTTGCATTGTGATGGTCCTTGCACTGCTTTTCTTCCTTCTTGGAACAACAACGTACCGGTATAGTATCAAAGGGGATGAGGAAAGCCCATTTGTGAGAATTGGAAAGGTGTTTGCTGCTGCATTAAGGAATTGGCGAACTACTCCTTTAGCAATAGCTTCAGAAGAGGAATCTCGTGGAACCTTGCCTCACCAAAGTTCTGAACAATTCAAATTCCTTAACAAAGCCTTGGTTGCACCGGATGATTTGAAGGAAAATGGGAAGGTCTGTACCATCGCTGAGGTTGAAGAAGCAAAAGCTGTTCTTAGGTTGTTTCCGATATGGGTTACATGCTTGGTATATGCTATTGTCTTTGCACAGTTCTCGACTTTCTTCACTAAGCAAGGTGCCACCATGGACCGAACATTTATGCCAGGTTTCGACATACCAGCTGCTGCACTTCAGTCGTTTATAAGCCTTGTCATTATTATATTCATTCCCATTTATGATCGTATATTTGTCCCTATAGCAAGATCATTCACCAGGGAACCCTCTGGCATTACAATGCTACAAAGAATAGGAACTGGGATGGTTATATCTACTATTTCCATGGTAGTTGCAGCTTTAGTTGAGATACAGAGGCTCCAAACTGCCAAAGATTATGATCTGGTTGATATGCCAAGTGCCACTGTTCCAATGAGTGTTTGGTGGTTAGTTCCTCAATATTTGTTAACCGGACTGGCAGATGTTTTCACCATGGTTGGTCTGCAAGAGTTCTTCTATGATCAGGTACCAAAAGAATTAAGAAGTGTAGGACTTGCCCTCTACCTCAGTATATTTGGTGTCGGAAGCTTCCTGAGCAGCTTTCTTATCTCTGTTATTGAGGAAGCAACCAGTTGGGCAGGTCACACTAGCTGGTTTTCCAATAACCTTAATCGTGCACATCTTGATTACTTTTATTGGTTACTAGCTGTACTCAGTGCAGTACAATTGGCCATCTACATGTGTACAGCAAAATCTTACATTTATAACAGGGGTGGTATGTCTTGTGATCAATGGTGCTCTAGTTTTCTTACATACCGAGTGAACCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

568

Amino Acids

62.67

Weight (kDa)

5.31

Isoelectric Point (pI)

43.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 56 - 490 4.3e-14 Major Facilitator Superfamily
PTR2 PF00854 103 - 509 1.4e-97 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1082, 1638
AatII GACGTC 1 cut(s) 45
Acc36I ACCTGC 1 cut(s) 1502
Acc65I GGTACC 1 cut(s) 1399
AccB1I GGYRCC 3 cut(s) 53, 1016, 1399
AccIII TCCGGA 1 cut(s) 13
AciI CCGC 8 cut(s) 29, 82, 99, 111, 140, 221, 310, 324
AclWI GGATC 2 cut(s) 81, 491
AcoI YGGCCR 6 cut(s) 3, 70, 213, 222, 369, 1602
AcsI RAATTY 1 cut(s) 842
AcuI CTGAAG 2 cut(s) 774, 1055
AcyI GRCGYC 3 cut(s) 42, 54, 254
AfaI GTAC 6 cut(s) 686, 901, 1401, 1584, 1596, 1618
AfiI CCNNNNNNNGG 2 cut(s) 102, 272
AflIII ACRYGT 1 cut(s) 1611
AgeI ACCGGT 1 cut(s) 687
AgsI TTSAA 5 cut(s) 395, 532, 841, 880, 917
AjnI CCWGG 3 cut(s) 297, 1042, 1151
Alw21I GWGCWC 2 cut(s) 1552, 1673
Alw26I GTCTC 1 cut(s) 11
Alw44I GTGCAC 1 cut(s) 1548
AlwI GGATC 2 cut(s) 81, 491
AlwNI CAGNNNCTG 1 cut(s) 1064
Aor13HI TCCGGA 1 cut(s) 13
AoxI GGCC 8 cut(s) 3, 70, 194, 213, 222, 369, 559, 1602
ApaLI GTGCAC 1 cut(s) 1548
ApeKI GCWGC 6 cut(s) 746, 749, 1061, 1064, 1229, 1470
ApoI RAATTY 1 cut(s) 842
AsiGI ACCGGT 1 cut(s) 687
Asp718I GGTACC 1 cut(s) 1399
AspLEI GCGC 1 cut(s) 56
AspS9I GGNCC 5 cut(s) 79, 194, 560, 646, 1027
AsuC2I CCSGG 1 cut(s) 193
AsuHPI GGTGA 3 cut(s) 812, 1141, 1354
AvaII GGWCC 3 cut(s) 79, 646, 1027
BaeGI GKGCMC 1 cut(s) 1552
BalI TGGCCA 2 cut(s) 5, 1604
BanI GGYRCC 3 cut(s) 53, 1016, 1399
BauI CACGAG 1 cut(s) 804
BbsI GAAGAC 1 cut(s) 620
Bbv12I GWGCWC 2 cut(s) 1552, 1673
BbvCI CCTCAGC 1 cut(s) 909
BbvI GCAGC 6 cut(s) 733, 736, 1048, 1051, 1241, 1482
BccI CCATC 5 cut(s) 81, 637, 911, 1192, 1613
BceAI ACGGC 6 cut(s) 41, 85, 228, 234, 267, 356
BcgI CGANNNNNNTGC 4 cut(s) 975, 1009, 1056, 1090
BciT130I CCWGG 3 cut(s) 299, 1044, 1153
BclI TGATCA 2 cut(s) 1393, 1660
BcnI CCSGG 1 cut(s) 193
BcoDI GTCTC 1 cut(s) 11
BfaI CTAG 4 cut(s) 35, 1521, 1577, 1674
BfmI CTRYAG 1 cut(s) 1134
BfoI RGCGCY 1 cut(s) 57
BfuAI ACCTGC 1 cut(s) 1502
BglI GCCNNNNNGGC 1 cut(s) 221
BisI GCNGC 8 cut(s) 222, 324, 747, 750, 1062, 1065, 1230, 1471
BlsI GCNGC 8 cut(s) 223, 325, 748, 751, 1063, 1066, 1231, 1472
Bme1390I CCNGG 4 cut(s) 193, 299, 1044, 1153
Bme18I GGWCC 3 cut(s) 79, 646, 1027
BmgT120I GGNCC 5 cut(s) 79, 194, 560, 646, 1027
BmiI GGNNCC 8 cut(s) 55, 277, 562, 811, 1018, 1158, 1253, 1401
BmrFI CCNGG 4 cut(s) 193, 299, 1044, 1153
BmrI ACTGGG 1 cut(s) 1203
BmsI GCATC 1 cut(s) 122
BmuI ACTGGG 1 cut(s) 1203
BpiI GAAGAC 1 cut(s) 620
BplI GAGNNNNNCTC 1 cut(s) 1683
Bpu10I CCTNAGC 2 cut(s) 909, 1466
BpuMI CCSGG 1 cut(s) 193
BsaBI GATNNNNATC 1 cut(s) 1272
BsaHI GRCGYC 3 cut(s) 42, 54, 254
BsaI GGTCTC 1 cut(s) 11
BsaJI CCNNGG 8 cut(s) 210, 216, 298, 858, 1023, 1152, 1218, 1365
BsaWI WCCGGW 5 cut(s) 13, 76, 687, 868, 1343
BsaXI ACNNNNNCTCC 6 cut(s) 10, 40, 267, 297, 1236, 1266
Bsc4I CCNNNNNNNGG 2 cut(s) 102, 272
Bse118I RCCGGY 1 cut(s) 687
Bse1I ACTGG 3 cut(s) 1198, 1353, 1503
Bse8I GATNNNNATC 1 cut(s) 1272
BseAI TCCGGA 1 cut(s) 13
BseBI CCWGG 3 cut(s) 299, 1044, 1153
BseDI CCNNGG 8 cut(s) 210, 216, 298, 858, 1023, 1152, 1218, 1365
BseGI GGATG 4 cut(s) 73, 712, 877, 1203
BseJI GATNNNNATC 1 cut(s) 1272
BseLI CCNNNNNNNGG 2 cut(s) 102, 272
BseMII CTCAG 5 cut(s) 401, 900, 1453, 1457, 1600
BseNI ACTGG 3 cut(s) 1198, 1353, 1503
BseRI GAGGAG 1 cut(s) 518
BseSI GKGCMC 1 cut(s) 1552
BseX3I CGGCCG 2 cut(s) 222, 369
BseXI GCAGC 6 cut(s) 733, 736, 1048, 1051, 1241, 1482
BsgI GTGCAG 2 cut(s) 1050, 1611
Bsh1285I CGRYCG 2 cut(s) 225, 372
BshFI GGCC 8 cut(s) 5, 72, 196, 215, 224, 371, 561, 1604
BshNI GGYRCC 3 cut(s) 53, 1016, 1399
BshTI ACCGGT 1 cut(s) 687
BsiEI CGRYCG 2 cut(s) 225, 372
BsiHKAI GWGCWC 2 cut(s) 1552, 1673
BsiSI CCGG 7 cut(s) 14, 77, 96, 192, 688, 869, 1344
BslFI GGGAC 2 cut(s) 216, 1115
BslI CCNNNNNNNGG 2 cut(s) 102, 272
BsmAI GTCTC 1 cut(s) 11
BsmFI GGGAC 2 cut(s) 216, 1115
BsnI GGCC 8 cut(s) 5, 72, 196, 215, 224, 371, 561, 1604
Bso31I GGTCTC 1 cut(s) 11
Bsp1286I GDGCHC 2 cut(s) 1552, 1673
Bsp13I TCCGGA 1 cut(s) 13
Bsp1407I TGTACA 1 cut(s) 1616
Bsp143I GATC 8 cut(s) 86, 478, 496, 1117, 1142, 1273, 1393, 1660
Bsp19I CCATGG 3 cut(s) 1023, 1218, 1365
BspACI CCGC 8 cut(s) 29, 82, 99, 111, 140, 221, 310, 324
BspANI GGCC 8 cut(s) 5, 72, 196, 215, 224, 371, 561, 1604
BspCNI CTCAG 5 cut(s) 400, 901, 1452, 1458, 1599
BspEI TCCGGA 1 cut(s) 13
BspLI GGNNCC 8 cut(s) 55, 277, 562, 811, 1018, 1158, 1253, 1401
BspMI ACCTGC 1 cut(s) 1502
BspPI GGATC 2 cut(s) 81, 491
BspT107I GGYRCC 3 cut(s) 53, 1016, 1399
BspTNI GGTCTC 1 cut(s) 11
BsrFI RCCGGY 1 cut(s) 687
BsrGI TGTACA 1 cut(s) 1616
BsrI ACTGG 3 cut(s) 1198, 1353, 1503
BssAI RCCGGY 1 cut(s) 687
BssECI CCNNGG 8 cut(s) 210, 216, 298, 858, 1023, 1152, 1218, 1365
BssMI GATC 8 cut(s) 86, 478, 496, 1117, 1142, 1273, 1393, 1660
BssNI GRCGYC 3 cut(s) 42, 54, 254
BssSI CACGAG 1 cut(s) 804
BssT1I CCWWGG 4 cut(s) 858, 1023, 1218, 1365
Bst2BI CACGAG 1 cut(s) 804
Bst2UI CCWGG 3 cut(s) 299, 1044, 1153
Bst4CI ACNGT 5 cut(s) 207, 364, 580, 990, 1300
Bst6I CTCTTC 1 cut(s) 789
BstACI GRCGYC 3 cut(s) 42, 54, 254
BstAUI TGTACA 1 cut(s) 1616
BstC8I GCNNGC 1 cut(s) 559
BstDEI CTNAG 8 cut(s) 387, 605, 909, 935, 1008, 1439, 1466, 1586
BstDSI CCRYGG 5 cut(s) 210, 216, 1023, 1218, 1365
BstF5I GGATG 4 cut(s) 73, 712, 877, 1203
BstH2I RGCGCY 1 cut(s) 57
BstHHI GCGC 1 cut(s) 56
BstKTI GATC 8 cut(s) 89, 481, 499, 1120, 1145, 1276, 1396, 1663
BstMAI GTCTC 1 cut(s) 11
BstMBI GATC 8 cut(s) 86, 478, 496, 1117, 1142, 1273, 1393, 1660
BstMCI CGRYCG 2 cut(s) 225, 372
BstMWI GCNNNNNNNGC 6 cut(s) 90, 221, 284, 473, 863, 1467
BstNI CCWGG 3 cut(s) 299, 1044, 1153
BstNSI RCATGY 2 cut(s) 963, 1615
BstSCI CCNGG 4 cut(s) 191, 297, 1042, 1151
BstSFI CTRYAG 1 cut(s) 1134
BstSLI GKGCMC 1 cut(s) 1552
BstV1I GCAGC 6 cut(s) 733, 736, 1048, 1051, 1241, 1482
BstV2I GAAGAC 1 cut(s) 620
BstX2I RGATCY 2 cut(s) 86, 496
BstYI RGATCY 2 cut(s) 86, 496
BstZI CGGCCG 2 cut(s) 222, 369
BsuRI GGCC 8 cut(s) 5, 72, 196, 215, 224, 371, 561, 1604
BtgI CCRYGG 5 cut(s) 210, 216, 1023, 1218, 1365
BtgZI GCGATG 1 cut(s) 889
BtsCI GGATG 4 cut(s) 73, 712, 877, 1203
BtsI GCAGTG 1 cut(s) 653
BtsIMutI CAGTG 3 cut(s) 653, 1296, 1594
BveI ACCTGC 1 cut(s) 1502
Cac8I GCNNGC 1 cut(s) 559
CaiI CAGNNNCTG 1 cut(s) 1064
CfoI GCGC 1 cut(s) 56
Cfr10I RCCGGY 1 cut(s) 687
Cfr13I GGNCC 5 cut(s) 79, 194, 560, 646, 1027
CpoI CGGWCCG 1 cut(s) 79
CseI GACGC 1 cut(s) 243
Csp6I GTAC 6 cut(s) 685, 900, 1400, 1583, 1595, 1617
CspAI ACCGGT 1 cut(s) 687
CspI CGGWCCG 1 cut(s) 79
CviAII CATG 5 cut(s) 960, 1024, 1219, 1366, 1612
CviQI GTAC 6 cut(s) 685, 900, 1400, 1583, 1595, 1617
DdeI CTNAG 8 cut(s) 387, 605, 909, 935, 1008, 1439, 1466, 1586
DinI GGCGCC 1 cut(s) 55
DpnI GATC 8 cut(s) 88, 480, 498, 1119, 1144, 1275, 1395, 1662
DpnII GATC 8 cut(s) 86, 478, 496, 1117, 1142, 1273, 1393, 1660
EaeI YGGCCR 6 cut(s) 3, 70, 213, 222, 369, 1602
EagI CGGCCG 2 cut(s) 222, 369
Eam1104I CTCTTC 1 cut(s) 789
EarI CTCTTC 1 cut(s) 789
EclXI CGGCCG 2 cut(s) 222, 369
Eco130I CCWWGG 4 cut(s) 858, 1023, 1218, 1365
Eco31I GGTCTC 1 cut(s) 11
Eco47I GGWCC 3 cut(s) 79, 646, 1027
Eco52I CGGCCG 2 cut(s) 222, 369
Eco57I CTGAAG 2 cut(s) 774, 1055
EcoRII CCWGG 3 cut(s) 297, 1042, 1151
EcoT14I CCWWGG 4 cut(s) 858, 1023, 1218, 1365
EgeI GGCGCC 1 cut(s) 55
EheI GGCGCC 1 cut(s) 55
ErhI CCWWGG 4 cut(s) 858, 1023, 1218, 1365
FaeI CATG 5 cut(s) 963, 1027, 1222, 1369, 1615
FalI AAGNNNNNCTT 2 cut(s) 918, 950
FaqI GGGAC 2 cut(s) 216, 1115
FatI CATG 5 cut(s) 959, 1023, 1218, 1365, 1611
FauNDI CATATG 1 cut(s) 239
FbaI TGATCA 2 cut(s) 1393, 1660
Fnu4HI GCNGC 8 cut(s) 222, 324, 747, 750, 1062, 1065, 1230, 1471
FokI GGATG 4 cut(s) 60, 719, 884, 1210
Fsp4HI GCNGC 8 cut(s) 222, 324, 747, 750, 1062, 1065, 1230, 1471
FspBI CTAG 4 cut(s) 35, 1521, 1577, 1674
GlaI GCGC 1 cut(s) 55
GluI GCNGC 8 cut(s) 222, 324, 747, 750, 1062, 1065, 1230, 1471
HaeII RGCGCY 1 cut(s) 57
HaeIII GGCC 8 cut(s) 5, 72, 196, 215, 224, 371, 561, 1604
HapII CCGG 7 cut(s) 14, 77, 96, 192, 688, 869, 1344
HgaI GACGC 1 cut(s) 243
HhaI GCGC 1 cut(s) 56
Hin1I GRCGYC 3 cut(s) 42, 54, 254
Hin1II CATG 5 cut(s) 963, 1027, 1222, 1369, 1615
Hin6I GCGC 1 cut(s) 54
HinP1I GCGC 1 cut(s) 54
HincII GTYRAC 3 cut(s) 61, 235, 1341
HindII GTYRAC 3 cut(s) 61, 235, 1341
HindIII AAGCTT 1 cut(s) 1459
HinfI GANTC 3 cut(s) 162, 290, 800
HpaI GTTAAC 1 cut(s) 1341
HpaII CCGG 7 cut(s) 14, 77, 96, 192, 688, 869, 1344
HphI GGTGA 3 cut(s) 812, 1141, 1354
Hpy166II GTNNAC 8 cut(s) 61, 210, 235, 446, 1341, 1550, 1617, 1696
Hpy188I TCNGA 7 cut(s) 189, 473, 793, 832, 948, 1457, 1703
Hpy188III TCNNGA 6 cut(s) 14, 246, 500, 994, 1465, 1556
Hpy8I GTNNAC 8 cut(s) 61, 210, 235, 446, 1341, 1550, 1617, 1696
Hpy99I CGWCG 4 cut(s) 44, 47, 259, 287
HpyAV CCTTC 5 cut(s) 289, 390, 677, 874, 886
HpyCH4III ACNGT 5 cut(s) 207, 364, 580, 990, 1300
HpyCH4IV ACGT 3 cut(s) 42, 231, 683
HpyF10VI GCNNNNNNNGC 6 cut(s) 90, 221, 284, 473, 863, 1467
HpyF3I CTNAG 8 cut(s) 387, 605, 909, 935, 1008, 1439, 1466, 1586
HpySE526I ACGT 3 cut(s) 42, 231, 683
Hsp92I GRCGYC 3 cut(s) 42, 54, 254
Hsp92II CATG 5 cut(s) 963, 1027, 1222, 1369, 1615
HspAI GCGC 1 cut(s) 54
KasI GGCGCC 1 cut(s) 53
Kpn2I TCCGGA 1 cut(s) 13
KpnI GGTACC 1 cut(s) 1403
Ksp22I TGATCA 2 cut(s) 1393, 1660
KspAI GTTAAC 1 cut(s) 1341
Kzo9I GATC 8 cut(s) 86, 478, 496, 1117, 1142, 1273, 1393, 1660
LmnI GCTCC 5 cut(s) 98, 173, 275, 473, 1257
Lsp1109I GCAGC 6 cut(s) 733, 736, 1048, 1051, 1241, 1482
LweI GCATC 1 cut(s) 122
MaeI CTAG 4 cut(s) 35, 1521, 1577, 1674
MaeII ACGT 3 cut(s) 42, 231, 683
MaeIII GTNAC 3 cut(s) 955, 1514, 1572
MalI GATC 8 cut(s) 88, 480, 498, 1119, 1144, 1275, 1395, 1662
MboI GATC 8 cut(s) 86, 478, 496, 1117, 1142, 1273, 1393, 1660
MboII GAAGA 8 cut(s) 375, 520, 620, 655, 806, 929, 994, 1378
MfeI CAATTG 2 cut(s) 532, 1598
MflI RGATCY 2 cut(s) 86, 496
MhlI GDGCHC 2 cut(s) 1552, 1673
MlsI TGGCCA 2 cut(s) 5, 1604
MluCI AATT 7 cut(s) 532, 729, 760, 836, 842, 1409, 1598
MluNI TGGCCA 2 cut(s) 5, 1604
Mly113I GGCGCC 1 cut(s) 54
MmeI TCCRAC 2 cut(s) 195, 1435
Mox20I TGGCCA 2 cut(s) 5, 1604
MroI TCCGGA 1 cut(s) 13
MscI TGGCCA 2 cut(s) 5, 1604
MseI TTAA 5 cut(s) 755, 849, 1340, 1412, 1542
MslI CAYNNNNRTG 3 cut(s) 641, 1172, 1610
Msp20I TGGCCA 2 cut(s) 5, 1604
MspA1I CMGCKG 1 cut(s) 1061
MspI CCGG 7 cut(s) 14, 77, 96, 192, 688, 869, 1344
MspR9I CCNGG 4 cut(s) 193, 299, 1044, 1153
MunI CAATTG 2 cut(s) 532, 1598
MvaI CCWGG 3 cut(s) 299, 1044, 1153
MwoI GCNNNNNNNGC 6 cut(s) 90, 221, 284, 473, 863, 1467
NarI GGCGCC 1 cut(s) 54
NciI CCSGG 1 cut(s) 193
NcoI CCATGG 3 cut(s) 1023, 1218, 1365
NdeI CATATG 1 cut(s) 239
NdeII GATC 8 cut(s) 86, 478, 496, 1117, 1142, 1273, 1393, 1660
NlaIII CATG 5 cut(s) 963, 1027, 1222, 1369, 1615
NlaIV GGNNCC 8 cut(s) 55, 277, 562, 811, 1018, 1158, 1253, 1401
NmeAIII GCCGAG 1 cut(s) 250
NmuCI GTSAC 1 cut(s) 1514
NspI RCATGY 2 cut(s) 963, 1615
PciI ACATGT 1 cut(s) 1611
PfeI GAWTC 3 cut(s) 162, 290, 800
PflFI GACNNNGTC 2 cut(s) 41, 364
PinAI ACCGGT 1 cut(s) 687
PkrI GCNGC 8 cut(s) 223, 325, 748, 751, 1063, 1066, 1231, 1472
PluTI GGCGCC 1 cut(s) 57
PscI ACATGT 1 cut(s) 1611
PsiI TTATAA 2 cut(s) 1082, 1638
Psp6I CCWGG 3 cut(s) 297, 1042, 1151
PspGI CCWGG 3 cut(s) 297, 1042, 1151
PspN4I GGNNCC 8 cut(s) 55, 277, 562, 811, 1018, 1158, 1253, 1401
PspPI GGNCC 5 cut(s) 79, 194, 560, 646, 1027
PstNI CAGNNNCTG 1 cut(s) 1064
PsuI RGATCY 2 cut(s) 86, 496
PsyI GACNNNGTC 2 cut(s) 41, 364
PvuII CAGCTG 1 cut(s) 1061
RsaI GTAC 6 cut(s) 686, 901, 1401, 1584, 1596, 1618
RsaNI GTAC 6 cut(s) 685, 900, 1400, 1583, 1595, 1617
RseI CAYNNNNRTG 3 cut(s) 641, 1172, 1610
Rsr2I CGGWCCG 1 cut(s) 79
RsrII CGGWCCG 1 cut(s) 79
SaqAI TTAA 5 cut(s) 755, 849, 1340, 1412, 1542
SatI GCNGC 8 cut(s) 222, 324, 747, 750, 1062, 1065, 1230, 1471
Sau3AI GATC 8 cut(s) 86, 478, 496, 1117, 1142, 1273, 1393, 1660
Sau96I GGNCC 5 cut(s) 79, 194, 560, 646, 1027
ScrFI CCNGG 4 cut(s) 193, 299, 1044, 1153
SduI GDGCHC 2 cut(s) 1552, 1673
SfaNI GCATC 1 cut(s) 122
SfcI CTRYAG 1 cut(s) 1134
SfiI GGCCNNNNNGGCC 1 cut(s) 221
SfoI GGCGCC 1 cut(s) 55
SinI GGWCC 3 cut(s) 79, 646, 1027
SmiMI CAYNNNNRTG 3 cut(s) 641, 1172, 1610
Sse9I AATT 7 cut(s) 532, 729, 760, 836, 842, 1409, 1598
SsiI CCGC 8 cut(s) 29, 82, 99, 111, 140, 221, 310, 324
SspDI GGCGCC 1 cut(s) 53
SspI AATATT 1 cut(s) 1334
SspMI CTAG 4 cut(s) 35, 1521, 1577, 1674
StyD4I CCNGG 4 cut(s) 191, 297, 1042, 1151
StyI CCWWGG 4 cut(s) 858, 1023, 1218, 1365
TaaI ACNGT 5 cut(s) 207, 364, 580, 990, 1300
TaiI ACGT 3 cut(s) 45, 234, 686
TaqI TCGA 2 cut(s) 995, 1050
TaqII GACCGA 1 cut(s) 1044
TasI AATT 7 cut(s) 532, 729, 760, 836, 842, 1409, 1598
TatI WGTACW 3 cut(s) 1582, 1594, 1616
TauI GCSGC 2 cut(s) 224, 326
TfiI GAWTC 3 cut(s) 162, 290, 800
Tru1I TTAA 5 cut(s) 755, 849, 1340, 1412, 1542
Tru9I TTAA 5 cut(s) 755, 849, 1340, 1412, 1542
TscAI CASTG 3 cut(s) 660, 1303, 1594
TseFI GTSAC 1 cut(s) 1514
TseI GCWGC 6 cut(s) 746, 749, 1061, 1064, 1229, 1470
Tsp45I GTSAC 1 cut(s) 1514
TspDTI ATGAA 2 cut(s) 109, 1093
TspRI CASTG 3 cut(s) 660, 1303, 1594
Tth111I GACNNNGTC 2 cut(s) 41, 364
VneI GTGCAC 1 cut(s) 1548
VpaK11BI GGWCC 3 cut(s) 79, 646, 1027
XapI RAATTY 1 cut(s) 842
XceI RCATGY 2 cut(s) 963, 1615
XcmI CCANNNNNNNNNTGG 1 cut(s) 1311
XspI CTAG 4 cut(s) 35, 1521, 1577, 1674
ZraI GACGTC 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.