Protein NRT1 PTR FAMILY 5.10-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SWIM | PF04434 | 33 - 64 | 2.1e-06 | SWIM zinc finger |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 367, 411 |
| AclWI | GGATC | 1 cut(s) | 397 |
| AcsI | RAATTY | 1 cut(s) | 32 |
| AfaI | GTAC | 1 cut(s) | 224 |
| AgsI | TTSAA | 5 cut(s) | 16, 244, 302, 373, 392 |
| AjnI | CCWGG | 2 cut(s) | 64, 346 |
| AluBI | AGCT | 4 cut(s) | 188, 252, 326, 400 |
| AluI | AGCT | 4 cut(s) | 188, 252, 326, 400 |
| AlwI | GGATC | 1 cut(s) | 397 |
| AoxI | GGCC | 3 cut(s) | 169, 341, 353 |
| ApeKI | GCWGC | 3 cut(s) | 176, 188, 441 |
| ApoI | RAATTY | 1 cut(s) | 32 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 368 |
| AspA2I | CCTAGG | 1 cut(s) | 356 |
| AspLEI | GCGC | 1 cut(s) | 441 |
| AsuHPI | GGTGA | 1 cut(s) | 373 |
| AvrII | CCTAGG | 1 cut(s) | 356 |
| BaeGI | GKGCMC | 1 cut(s) | 425 |
| BbsI | GAAGAC | 1 cut(s) | 285 |
| BbvI | GCAGC | 3 cut(s) | 163, 175, 428 |
| BccI | CCATC | 1 cut(s) | 19 |
| BceAI | ACGGC | 1 cut(s) | 184 |
| BciT130I | CCWGG | 2 cut(s) | 66, 348 |
| BfaI | CTAG | 2 cut(s) | 60, 357 |
| BfmI | CTRYAG | 1 cut(s) | 253 |
| BisI | GCNGC | 4 cut(s) | 177, 189, 412, 442 |
| BlnI | CCTAGG | 1 cut(s) | 356 |
| BlsI | GCNGC | 4 cut(s) | 178, 190, 413, 443 |
| BmcAI | AGTACT | 1 cut(s) | 224 |
| Bme1390I | CCNGG | 2 cut(s) | 66, 348 |
| BmrFI | CCNGG | 2 cut(s) | 66, 348 |
| BpiI | GAAGAC | 1 cut(s) | 285 |
| BpmI | CTGGAG | 1 cut(s) | 87 |
| BsaJI | CCNNGG | 3 cut(s) | 64, 347, 356 |
| BsaWI | WCCGGW | 2 cut(s) | 267, 405 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 26 |
| BseBI | CCWGG | 2 cut(s) | 66, 348 |
| BseDI | CCNNGG | 3 cut(s) | 64, 347, 356 |
| BseSI | GKGCMC | 1 cut(s) | 425 |
| BseXI | GCAGC | 3 cut(s) | 163, 175, 428 |
| BsgI | GTGCAG | 2 cut(s) | 41, 427 |
| Bsh1285I | CGRYCG | 1 cut(s) | 272 |
| BshFI | GGCC | 3 cut(s) | 171, 343, 355 |
| BsiEI | CGRYCG | 1 cut(s) | 272 |
| BsiSI | CCGG | 2 cut(s) | 268, 406 |
| BsmI | GAATGC | 1 cut(s) | 118 |
| BsnI | GGCC | 3 cut(s) | 171, 343, 355 |
| Bsp1286I | GDGCHC | 1 cut(s) | 425 |
| Bsp143I | GATC | 3 cut(s) | 83, 144, 402 |
| BspACI | CCGC | 2 cut(s) | 367, 411 |
| BspANI | GGCC | 3 cut(s) | 171, 343, 355 |
| BspPI | GGATC | 1 cut(s) | 397 |
| BspQI | GCTCTTC | 1 cut(s) | 242 |
| BssECI | CCNNGG | 3 cut(s) | 64, 347, 356 |
| BssMI | GATC | 3 cut(s) | 83, 144, 402 |
| BssT1I | CCWWGG | 1 cut(s) | 356 |
| Bst2UI | CCWGG | 2 cut(s) | 66, 348 |
| Bst4CI | ACNGT | 1 cut(s) | 317 |
| Bst6I | CTCTTC | 2 cut(s) | 242, 332 |
| BstHHI | GCGC | 1 cut(s) | 441 |
| BstKTI | GATC | 3 cut(s) | 86, 147, 405 |
| BstMBI | GATC | 3 cut(s) | 83, 144, 402 |
| BstMCI | CGRYCG | 1 cut(s) | 272 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 185, 332, 420 |
| BstNI | CCWGG | 2 cut(s) | 66, 348 |
| BstSCI | CCNGG | 2 cut(s) | 64, 346 |
| BstSFI | CTRYAG | 1 cut(s) | 253 |
| BstSLI | GKGCMC | 1 cut(s) | 425 |
| BstV1I | GCAGC | 3 cut(s) | 163, 175, 428 |
| BstV2I | GAAGAC | 1 cut(s) | 285 |
| BsuRI | GGCC | 3 cut(s) | 171, 343, 355 |
| BtsIMutI | CAGTG | 2 cut(s) | 52, 444 |
| CfoI | GCGC | 1 cut(s) | 441 |
| Csp6I | GTAC | 1 cut(s) | 223 |
| CviAII | CATG | 3 cut(s) | 123, 129, 230 |
| CviJI | RGCY | 8 cut(s) | 63, 171, 188, 252, 326, 343, 355, 400 |
| CviKI_1 | RGCY | 8 cut(s) | 63, 171, 188, 252, 326, 343, 355, 400 |
| CviQI | GTAC | 1 cut(s) | 223 |
| DpnI | GATC | 3 cut(s) | 85, 146, 404 |
| DpnII | GATC | 3 cut(s) | 83, 144, 402 |
| Eam1104I | CTCTTC | 2 cut(s) | 242, 332 |
| EarI | CTCTTC | 2 cut(s) | 242, 332 |
| Eco130I | CCWWGG | 1 cut(s) | 356 |
| Eco147I | AGGCCT | 1 cut(s) | 355 |
| EcoRII | CCWGG | 2 cut(s) | 64, 346 |
| EcoT14I | CCWWGG | 1 cut(s) | 356 |
| ErhI | CCWWGG | 1 cut(s) | 356 |
| FaeI | CATG | 3 cut(s) | 126, 132, 233 |
| FatI | CATG | 3 cut(s) | 122, 128, 229 |
| Fnu4HI | GCNGC | 4 cut(s) | 177, 189, 412, 442 |
| Fsp4HI | GCNGC | 4 cut(s) | 177, 189, 412, 442 |
| FspBI | CTAG | 2 cut(s) | 60, 357 |
| GlaI | GCGC | 1 cut(s) | 440 |
| GluI | GCNGC | 4 cut(s) | 177, 189, 412, 442 |
| GsuI | CTGGAG | 1 cut(s) | 87 |
| HaeIII | GGCC | 3 cut(s) | 171, 343, 355 |
| HapII | CCGG | 2 cut(s) | 268, 406 |
| HhaI | GCGC | 1 cut(s) | 441 |
| Hin1II | CATG | 3 cut(s) | 126, 132, 233 |
| Hin6I | GCGC | 1 cut(s) | 439 |
| HinP1I | GCGC | 1 cut(s) | 439 |
| HincII | GTYRAC | 1 cut(s) | 106 |
| HindII | GTYRAC | 1 cut(s) | 106 |
| HinfI | GANTC | 1 cut(s) | 302 |
| HpaI | GTTAAC | 1 cut(s) | 106 |
| HpaII | CCGG | 2 cut(s) | 268, 406 |
| HphI | GGTGA | 1 cut(s) | 373 |
| Hpy166II | GTNNAC | 1 cut(s) | 106 |
| Hpy188I | TCNGA | 3 cut(s) | 88, 115, 196 |
| Hpy188III | TCNNGA | 1 cut(s) | 244 |
| Hpy8I | GTNNAC | 1 cut(s) | 106 |
| HpyAV | CCTTC | 1 cut(s) | 10 |
| HpyCH4III | ACNGT | 1 cut(s) | 317 |
| HpyCH4V | TGCA | 3 cut(s) | 22, 179, 444 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 185, 332, 420 |
| Hsp92II | CATG | 3 cut(s) | 126, 132, 233 |
| HspAI | GCGC | 1 cut(s) | 439 |
| KspAI | GTTAAC | 1 cut(s) | 106 |
| Kzo9I | GATC | 3 cut(s) | 83, 144, 402 |
| LguI | GCTCTTC | 1 cut(s) | 242 |
| LmnI | GCTCC | 1 cut(s) | 331 |
| LpnPI | CCDG | 6 cut(s) | 51, 78, 281, 333, 360, 419 |
| Lsp1109I | GCAGC | 3 cut(s) | 163, 175, 428 |
| MaeI | CTAG | 2 cut(s) | 60, 357 |
| MalI | GATC | 3 cut(s) | 85, 146, 404 |
| MboI | GATC | 3 cut(s) | 83, 144, 402 |
| MboII | GAAGA | 3 cut(s) | 259, 285, 349 |
| MfeI | CAATTG | 1 cut(s) | 148 |
| MhlI | GDGCHC | 1 cut(s) | 425 |
| MluCI | AATT | 2 cut(s) | 32, 148 |
| MmeI | TCCRAC | 1 cut(s) | 361 |
| MnlI | CCTC | 7 cut(s) | 70, 174, 202, 333, 345, 379, 462 |
| MroXI | GAANNNNTTC | 1 cut(s) | 368 |
| MseI | TTAA | 1 cut(s) | 105 |
| MslI | CAYNNNNRTG | 1 cut(s) | 127 |
| MspI | CCGG | 2 cut(s) | 268, 406 |
| MspR9I | CCNGG | 2 cut(s) | 66, 348 |
| MunI | CAATTG | 1 cut(s) | 148 |
| Mva1269I | GAATGC | 1 cut(s) | 118 |
| MvaI | CCWGG | 2 cut(s) | 66, 348 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 185, 332, 420 |
| NdeII | GATC | 3 cut(s) | 83, 144, 402 |
| NlaIII | CATG | 3 cut(s) | 126, 132, 233 |
| PceI | AGGCCT | 1 cut(s) | 355 |
| PciSI | GCTCTTC | 1 cut(s) | 242 |
| PctI | GAATGC | 1 cut(s) | 118 |
| PdmI | GAANNNNTTC | 1 cut(s) | 368 |
| PfeI | GAWTC | 1 cut(s) | 302 |
| PkrI | GCNGC | 4 cut(s) | 178, 190, 413, 443 |
| Psp6I | CCWGG | 2 cut(s) | 64, 346 |
| PspGI | CCWGG | 2 cut(s) | 64, 346 |
| RsaI | GTAC | 1 cut(s) | 224 |
| RsaNI | GTAC | 1 cut(s) | 223 |
| RseI | CAYNNNNRTG | 1 cut(s) | 127 |
| SapI | GCTCTTC | 1 cut(s) | 242 |
| SaqAI | TTAA | 1 cut(s) | 105 |
| SatI | GCNGC | 4 cut(s) | 177, 189, 412, 442 |
| Sau3AI | GATC | 3 cut(s) | 83, 144, 402 |
| ScaI | AGTACT | 1 cut(s) | 224 |
| ScrFI | CCNGG | 2 cut(s) | 66, 348 |
| SduI | GDGCHC | 1 cut(s) | 425 |
| SfcI | CTRYAG | 1 cut(s) | 253 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 127 |
| Sse9I | AATT | 2 cut(s) | 32, 148 |
| SseBI | AGGCCT | 1 cut(s) | 355 |
| SsiI | CCGC | 2 cut(s) | 367, 411 |
| SspMI | CTAG | 2 cut(s) | 60, 357 |
| StuI | AGGCCT | 1 cut(s) | 355 |
| StyD4I | CCNGG | 2 cut(s) | 64, 346 |
| StyI | CCWWGG | 1 cut(s) | 356 |
| TaaI | ACNGT | 1 cut(s) | 317 |
| TaqI | TCGA | 2 cut(s) | 82, 272 |
| TasI | AATT | 2 cut(s) | 32, 148 |
| TatI | WGTACW | 1 cut(s) | 222 |
| TauI | GCSGC | 1 cut(s) | 414 |
| TfiI | GAWTC | 1 cut(s) | 302 |
| Tru1I | TTAA | 1 cut(s) | 105 |
| Tru9I | TTAA | 1 cut(s) | 105 |
| TscAI | CASTG | 2 cut(s) | 52, 451 |
| TseI | GCWGC | 3 cut(s) | 176, 188, 441 |
| TspDTI | ATGAA | 3 cut(s) | 111, 117, 218 |
| TspRI | CASTG | 2 cut(s) | 52, 451 |
| XapI | RAATTY | 1 cut(s) | 32 |
| XmaJI | CCTAGG | 1 cut(s) | 356 |
| XmnI | GAANNNNTTC | 1 cut(s) | 368 |
| XspI | CTAG | 2 cut(s) | 60, 357 |
| ZrmI | AGTACT | 1 cut(s) | 224 |