Rroxscaffold_3G00231890

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000191
Physical Location & Seq
Forward (+)
17304870 .. 17309001
4132 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00231890.1

Sequence Viewer

Length: 1542 bp
ATGATAGCGGTGGAAGTTGCGGAGAGTTTCGCGTACTATGGGATTAGCTCCAATCTGATAACGTTTCTGACGGGGCCGTTGGGAGAGTCGACGGTGACGGCGGCGGAGAATGTGAACATATGGTCCGGAACTTCCCAGTTGCTTCCTCTGTTGGGAGCATTCGTGGCGGATTCTTTTCTGGGTCGCTACCGCACCATTATTATTGTTGCTTCTCTCCTCTACATTTTGGGACTCGGCTTGTTGACCATGTCGGCCTTGCTTACTTCTTCTGAGCTTCAAATAGTGTTATTCTTCTTCTCTCTATATCTAGTAGCAGTTGCGCAAGGTGGACACAAGCCCTGTGTTCAGGCTTTCGGGGCAGATCAGTTTGATGGACAAGATCCAGAGGAGTGCAAAGCGAAAAGCTCATTCTTCAATTGGTGGTACTTTGGTATGAATGCAGGCATAATAGTGGCATTCTCAGTATTGACCTACATACAGGACAATCTAAGCTGGGGTCTGGGTTTTGGAATTCCTTGTGTTGTGATGGTCCTTGCACTGATTATTTTTGTCAGTGGAACTAGGACATACCGGTATAGCATCAAAGGGGAGGAGGAAAGCCCATTTGTGAGAATCGGCAAGGTTTTTGTTGCTGCATTAAGGAACCGGCAAACTAGTCCTTCAGCAATAGCTTCTGAAGAGGAATCCCTTGGAACCTTGCCTGATCAAAGTTCTGAACAATTCAAGTTCCTCAACAAAGCCTTGCTTGCACCAGATAATTTGAAGAAAAATGGGAAGGTGTGTACCATTGCTGAGGTTGAGGAAGCAAAGGCTGTTCTGAGGCTGTTTCCAATATGGGCTACATGCTTGGCATATTCTATTGTATGTGCACAGTCCAGTACTTTCTTCACCAAGCAAGGTGCTACCATGGACAGAACTATTGTGCCCGGTCTTGACATACCAGCTGCTTCACTTCAGTCATTTATCTGCCTTGCCATAATGATGATCATACCCATTTATGACCGCATTTTAGTTCCAATGGCAAGAGCTTTCACCAGAGAACCCTCTGGCATTACGATGCTACAAAGAATCGGAACTGGTATGTTTTTCAATATCATGACTATGGTCGTTGCAGCTTTAGTTGAGATGAAAAGGCTTCAGACCGCCAAAGATTATGATCTGGTTGATCTGCCAAGTGCTACAATTCCAATGAGTATTTGGTGGTTGGTTCCTCAGTACTTTTTGTATGGACTAGCCGATGTTTTCACCATTGTTGGTCTACAAGAGTTCTTCTACGATCAGGTACCAAATGAATTAAGAAGCATAGGACTTGCCCTCTACCTCAGTATATTGGGTGTGGGAAACTTTCTGAGCAGCTTTCTTATCTCTATTATTGAGGAAGCAACCAGTTGGGGAGGCAACACTAGCTGGTTTTCCGACAACCTTAATCTTGCCCATCTTGATTACTTTTACTGGTTACTAGCAGCACTCAGTGCAGTAGGATTGTTGGCCTACATGTATTTTGCAAAATCTTACATTTATAATCGGGCTAGCACAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

513

Amino Acids

56.62

Weight (kDa)

4.97

Isoelectric Point (pI)

41.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 11 - 451 2e-11 Major Facilitator Superfamily
PTR2 PF00854 65 - 470 1.9e-96 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1521
Acc16I TGCGCA 1 cut(s) 321
Acc65I GGTACC 1 cut(s) 1282
AccB1I GGYRCC 1 cut(s) 1282
AccI GTMKAC 2 cut(s) 89, 1258
AccII CGCG 1 cut(s) 32
AccIII TCCGGA 1 cut(s) 125
AciI CCGC 8 cut(s) 8, 20, 101, 104, 167, 190, 1003, 1143
AclI AACGTT 1 cut(s) 62
AclWI GGATC 1 cut(s) 374
AcsI RAATTY 1 cut(s) 510
AcuI CTGAAG 4 cut(s) 645, 696, 938, 1121
AdeI CACNNNGTG 1 cut(s) 1472
AfaI GTAC 6 cut(s) 35, 425, 784, 880, 1217, 1284
AfiI CCNNNNNNNGG 1 cut(s) 152
AflIII ACRYGT 1 cut(s) 1494
AgeI ACCGGT 1 cut(s) 570
AgsI TTSAA 5 cut(s) 278, 415, 724, 763, 1090
AhlI ACTAGT 1 cut(s) 653
AloI GAACNNNNNNTCC 2 cut(s) 107, 139
Alw21I GWGCWC 1 cut(s) 871
Alw44I GTGCAC 1 cut(s) 867
AlwI GGATC 1 cut(s) 374
Aor13HI TCCGGA 1 cut(s) 125
AoxI GGCC 3 cut(s) 74, 252, 1488
ApaLI GTGCAC 1 cut(s) 867
ApeKI GCWGC 5 cut(s) 632, 944, 1112, 1353, 1463
ApoI RAATTY 1 cut(s) 510
AsiGI ACCGGT 1 cut(s) 570
Asp718I GGTACC 1 cut(s) 1282
AspLEI GCGC 1 cut(s) 322
AspS9I GGNCC 3 cut(s) 74, 123, 529
AsuC2I CCSGG 1 cut(s) 927
AsuHPI GGTGA 4 cut(s) 106, 880, 1024, 1237
AsuNHI GCTAGC 1 cut(s) 1529
AvaII GGWCC 2 cut(s) 123, 529
BaeGI GKGCMC 2 cut(s) 871, 927
BaeI ACNNNNGTAYC 2 cut(s) 415, 448
BanI GGYRCC 1 cut(s) 1282
Bbv12I GWGCWC 1 cut(s) 871
BbvCI CCTCAGC 1 cut(s) 792
BbvI GCAGC 5 cut(s) 619, 931, 1124, 1365, 1475
BccI CCATC 3 cut(s) 365, 520, 1443
BceAI ACGGC 2 cut(s) 61, 114
BclI TGATCA 2 cut(s) 703, 984
BcnI CCSGG 1 cut(s) 927
BcuI ACTAGT 1 cut(s) 653
BfaI CTAG 7 cut(s) 308, 561, 654, 1232, 1404, 1460, 1530
BisI GCNGC 6 cut(s) 102, 633, 945, 1113, 1354, 1464
BlsI GCNGC 6 cut(s) 103, 634, 946, 1114, 1355, 1465
BmcAI AGTACT 2 cut(s) 880, 1217
Bme1390I CCNGG 1 cut(s) 927
Bme18I GGWCC 2 cut(s) 123, 529
BmgT120I GGNCC 3 cut(s) 74, 123, 529
BmiI GGNNCC 5 cut(s) 75, 644, 694, 1209, 1284
BmrFI CCNGG 1 cut(s) 927
BmrI ACTGGG 1 cut(s) 130
BmsI GCATC 2 cut(s) 588, 1047
BmtI GCTAGC 1 cut(s) 1533
BmuI ACTGGG 1 cut(s) 130
BoxI GACNNNNGTC 1 cut(s) 1103
Bpu10I CCTNAGC 1 cut(s) 792
BpuMI CCSGG 1 cut(s) 927
BsaBI GATNNNNATC 1 cut(s) 1155
BsaJI CCNNGG 2 cut(s) 688, 906
BsaWI WCCGGW 2 cut(s) 125, 570
BsaXI ACNNNNNCTCC 2 cut(s) 147, 177
Bsc4I CCNNNNNNNGG 1 cut(s) 152
Bse118I RCCGGY 2 cut(s) 570, 645
Bse1I ACTGG 5 cut(s) 136, 876, 1081, 1386, 1457
Bse3DI GCAATG 1 cut(s) 786
Bse8I GATNNNNATC 1 cut(s) 1155
BseAI TCCGGA 1 cut(s) 125
BseDI CCNNGG 2 cut(s) 688, 906
BseJI GATNNNNATC 1 cut(s) 1155
BseLI CCNNNNNNNGG 1 cut(s) 152
BseMI GCAATG 1 cut(s) 786
BseMII CTCAG 8 cut(s) 261, 474, 783, 809, 1226, 1336, 1340, 1483
BseNI ACTGG 5 cut(s) 136, 876, 1081, 1386, 1457
BseRI GAGGAG 3 cut(s) 206, 401, 605
BseSI GKGCMC 2 cut(s) 871, 927
BseXI GCAGC 5 cut(s) 619, 931, 1124, 1365, 1475
BseYI CCCAGC 1 cut(s) 492
BsgI GTGCAG 1 cut(s) 1494
Bsh1236I CGCG 1 cut(s) 32
BshFI GGCC 3 cut(s) 76, 254, 1490
BshNI GGYRCC 1 cut(s) 1282
BshTI ACCGGT 1 cut(s) 570
BsiHKAI GWGCWC 1 cut(s) 871
BsiSI CCGG 4 cut(s) 126, 571, 646, 927
BslFI GGGAC 1 cut(s) 243
BslI CCNNNNNNNGG 1 cut(s) 152
BsmFI GGGAC 1 cut(s) 243
BsmI GAATGC 3 cut(s) 158, 442, 455
BsnI GGCC 3 cut(s) 76, 254, 1490
Bsp1286I GDGCHC 2 cut(s) 871, 927
Bsp13I TCCGGA 1 cut(s) 125
Bsp143I GATC 7 cut(s) 361, 379, 703, 984, 1156, 1165, 1276
Bsp19I CCATGG 1 cut(s) 906
BspACI CCGC 8 cut(s) 8, 20, 101, 104, 167, 190, 1003, 1143
BspANI GGCC 3 cut(s) 76, 254, 1490
BspCNI CTCAG 8 cut(s) 262, 473, 784, 810, 1225, 1335, 1341, 1482
BspEI TCCGGA 1 cut(s) 125
BspFNI CGCG 1 cut(s) 32
BspHI TCATGA 1 cut(s) 1095
BspLI GGNNCC 5 cut(s) 75, 644, 694, 1209, 1284
BspOI GCTAGC 1 cut(s) 1533
BspPI GGATC 1 cut(s) 374
BspT107I GGYRCC 1 cut(s) 1282
BsrDI GCAATG 1 cut(s) 786
BsrFI RCCGGY 2 cut(s) 570, 645
BsrI ACTGG 5 cut(s) 136, 876, 1081, 1386, 1457
BssAI RCCGGY 2 cut(s) 570, 645
BssECI CCNNGG 2 cut(s) 688, 906
BssMI GATC 7 cut(s) 361, 379, 703, 984, 1156, 1165, 1276
BssT1I CCWWGG 2 cut(s) 688, 906
Bst4CI ACNGT 2 cut(s) 94, 873
Bst6I CTCTTC 1 cut(s) 672
BstAPI GCANNNNNTGC 1 cut(s) 1472
BstC8I GCNNGC 3 cut(s) 442, 747, 1531
BstDEI CTNAG 9 cut(s) 270, 460, 488, 792, 818, 1212, 1322, 1349, 1469
BstDSI CCRYGG 1 cut(s) 906
BstFNI CGCG 1 cut(s) 32
BstHHI GCGC 1 cut(s) 322
BstKTI GATC 7 cut(s) 364, 382, 706, 987, 1159, 1168, 1279
BstMBI GATC 7 cut(s) 361, 379, 703, 984, 1156, 1165, 1276
BstMWI GCNNNNNNNGC 5 cut(s) 164, 356, 746, 1404, 1472
BstNSI RCATGY 2 cut(s) 846, 1498
BstPAI GACNNNNGTC 1 cut(s) 1103
BstSCI CCNGG 1 cut(s) 925
BstSLI GKGCMC 2 cut(s) 871, 927
BstUI CGCG 1 cut(s) 32
BstV1I GCAGC 5 cut(s) 619, 931, 1124, 1365, 1475
BstX2I RGATCY 1 cut(s) 379
BstYI RGATCY 1 cut(s) 379
BsuRI GGCC 3 cut(s) 76, 254, 1490
BtgI CCRYGG 1 cut(s) 906
BtsIMutI CAGTG 3 cut(s) 536, 559, 1477
Cac8I GCNNGC 3 cut(s) 442, 747, 1531
CciI TCATGA 1 cut(s) 1095
CfoI GCGC 1 cut(s) 322
Cfr10I RCCGGY 2 cut(s) 570, 645
Cfr13I GGNCC 3 cut(s) 74, 123, 529
Csp6I GTAC 6 cut(s) 34, 424, 783, 879, 1216, 1283
CspAI ACCGGT 1 cut(s) 570
CviAII CATG 5 cut(s) 247, 843, 907, 1096, 1495
CviQI GTAC 6 cut(s) 34, 424, 783, 879, 1216, 1283
DdeI CTNAG 9 cut(s) 270, 460, 488, 792, 818, 1212, 1322, 1349, 1469
DpnI GATC 7 cut(s) 363, 381, 705, 986, 1158, 1167, 1278
DpnII GATC 7 cut(s) 361, 379, 703, 984, 1156, 1165, 1276
DraIII CACNNNGTG 1 cut(s) 1472
Eam1104I CTCTTC 1 cut(s) 672
EarI CTCTTC 1 cut(s) 672
EciI GGCGGA 2 cut(s) 119, 182
Eco130I CCWWGG 2 cut(s) 688, 906
Eco47I GGWCC 2 cut(s) 123, 529
Eco57I CTGAAG 4 cut(s) 645, 696, 938, 1121
EcoRI GAATTC 1 cut(s) 510
EcoT14I CCWWGG 2 cut(s) 688, 906
ErhI CCWWGG 2 cut(s) 688, 906
FaeI CATG 5 cut(s) 250, 846, 910, 1099, 1498
FalI AAGNNNNNCTT 2 cut(s) 729, 761
FaqI GGGAC 1 cut(s) 243
FatI CATG 5 cut(s) 246, 842, 906, 1095, 1494
FauNDI CATATG 1 cut(s) 119
FbaI TGATCA 2 cut(s) 703, 984
FblI GTMKAC 2 cut(s) 89, 1258
Fnu4HI GCNGC 6 cut(s) 102, 633, 945, 1113, 1354, 1464
Fsp4HI GCNGC 6 cut(s) 102, 633, 945, 1113, 1354, 1464
FspBI CTAG 7 cut(s) 308, 561, 654, 1232, 1404, 1460, 1530
FspI TGCGCA 1 cut(s) 321
GlaI GCGC 1 cut(s) 321
GluI GCNGC 6 cut(s) 102, 633, 945, 1113, 1354, 1464
GsaI CCCAGC 1 cut(s) 496
HaeIII GGCC 3 cut(s) 76, 254, 1490
HapII CCGG 4 cut(s) 126, 571, 646, 927
HhaI GCGC 1 cut(s) 322
Hin1II CATG 5 cut(s) 250, 846, 910, 1099, 1498
Hin6I GCGC 1 cut(s) 320
HinP1I GCGC 1 cut(s) 320
HincII GTYRAC 2 cut(s) 90, 243
HindII GTYRAC 2 cut(s) 90, 243
HinfI GANTC 6 cut(s) 86, 170, 231, 612, 683, 1068
HpaII CCGG 4 cut(s) 126, 571, 646, 927
HphI GGTGA 4 cut(s) 106, 880, 1024, 1237
Hpy166II GTNNAC 7 cut(s) 90, 115, 243, 329, 783, 869, 1259
Hpy188III TCNNGA 5 cut(s) 126, 383, 932, 1096, 1439
Hpy8I GTNNAC 7 cut(s) 90, 115, 243, 329, 783, 869, 1259
Hpy99I CGWCG 1 cut(s) 94
HpyAV CCTTC 2 cut(s) 669, 769
HpyCH4III ACNGT 2 cut(s) 94, 873
HpyCH4IV ACGT 1 cut(s) 62
HpyCH4V TGCA 9 cut(s) 393, 440, 536, 635, 749, 869, 1112, 1475, 1505
HpyF10VI GCNNNNNNNGC 5 cut(s) 164, 356, 746, 1404, 1472
HpyF3I CTNAG 9 cut(s) 270, 460, 488, 792, 818, 1212, 1322, 1349, 1469
HpySE526I ACGT 1 cut(s) 62
Hsp92II CATG 5 cut(s) 250, 846, 910, 1099, 1498
HspAI GCGC 1 cut(s) 320
Kpn2I TCCGGA 1 cut(s) 125
KpnI GGTACC 1 cut(s) 1286
Ksp22I TGATCA 2 cut(s) 703, 984
Kzo9I GATC 7 cut(s) 361, 379, 703, 984, 1156, 1165, 1276
LmnI GCTCC 2 cut(s) 53, 155
Lsp1109I GCAGC 5 cut(s) 619, 931, 1124, 1365, 1475
LweI GCATC 2 cut(s) 588, 1047
MaeI CTAG 7 cut(s) 308, 561, 654, 1232, 1404, 1460, 1530
MaeII ACGT 1 cut(s) 62
MaeIII GTNAC 2 cut(s) 94, 1455
MalI GATC 7 cut(s) 363, 381, 705, 986, 1158, 1167, 1278
MboI GATC 7 cut(s) 361, 379, 703, 984, 1156, 1165, 1276
MboII GAAGA 8 cut(s) 258, 283, 286, 403, 689, 775, 877, 1261
MfeI CAATTG 1 cut(s) 415
MflI RGATCY 1 cut(s) 379
MhlI GDGCHC 2 cut(s) 871, 927
MluCI AATT 6 cut(s) 415, 510, 719, 757, 1182, 1292
MlyI GAGTC 2 cut(s) 95, 225
MmeI TCCRAC 1 cut(s) 1440
MroI TCCGGA 1 cut(s) 125
MseI TTAA 3 cut(s) 638, 1295, 1425
MslI CAYNNNNRTG 4 cut(s) 449, 980, 1055, 1100
MspA1I CMGCKG 1 cut(s) 944
MspI CCGG 4 cut(s) 126, 571, 646, 927
MspR9I CCNGG 1 cut(s) 927
MunI CAATTG 1 cut(s) 415
Mva1269I GAATGC 3 cut(s) 158, 442, 455
MvnI CGCG 1 cut(s) 32
MwoI GCNNNNNNNGC 5 cut(s) 164, 356, 746, 1404, 1472
NciI CCSGG 1 cut(s) 927
NcoI CCATGG 1 cut(s) 906
NdeI CATATG 1 cut(s) 119
NdeII GATC 7 cut(s) 361, 379, 703, 984, 1156, 1165, 1276
NheI GCTAGC 1 cut(s) 1529
NlaIII CATG 5 cut(s) 250, 846, 910, 1099, 1498
NlaIV GGNNCC 5 cut(s) 75, 644, 694, 1209, 1284
NmeAIII GCCGAG 1 cut(s) 213
NmuCI GTSAC 1 cut(s) 94
NsbI TGCGCA 1 cut(s) 321
NspI RCATGY 2 cut(s) 846, 1498
PagI TCATGA 1 cut(s) 1095
PciI ACATGT 1 cut(s) 1494
PctI GAATGC 3 cut(s) 158, 442, 455
PfeI GAWTC 4 cut(s) 170, 612, 683, 1068
PflFI GACNNNGTC 1 cut(s) 247
PinAI ACCGGT 1 cut(s) 570
PkrI GCNGC 6 cut(s) 103, 634, 946, 1114, 1355, 1465
PleI GAGTC 2 cut(s) 94, 225
PpsI GAGTC 2 cut(s) 94, 225
PscI ACATGT 1 cut(s) 1494
PshAI GACNNNNGTC 1 cut(s) 1103
PsiI TTATAA 1 cut(s) 1521
Psp1406I AACGTT 1 cut(s) 62
PspFI CCCAGC 1 cut(s) 492
PspN4I GGNNCC 5 cut(s) 75, 644, 694, 1209, 1284
PspPI GGNCC 3 cut(s) 74, 123, 529
PsuI RGATCY 1 cut(s) 379
PsyI GACNNNGTC 1 cut(s) 247
PvuII CAGCTG 1 cut(s) 944
RsaI GTAC 6 cut(s) 35, 425, 784, 880, 1217, 1284
RsaNI GTAC 6 cut(s) 34, 424, 783, 879, 1216, 1283
RseI CAYNNNNRTG 4 cut(s) 449, 980, 1055, 1100
SalI GTCGAC 1 cut(s) 88
SaqAI TTAA 3 cut(s) 638, 1295, 1425
SatI GCNGC 6 cut(s) 102, 633, 945, 1113, 1354, 1464
Sau3AI GATC 7 cut(s) 361, 379, 703, 984, 1156, 1165, 1276
Sau96I GGNCC 3 cut(s) 74, 123, 529
ScaI AGTACT 2 cut(s) 880, 1217
SchI GAGTC 2 cut(s) 95, 225
ScrFI CCNGG 1 cut(s) 927
SduI GDGCHC 2 cut(s) 871, 927
SfaNI GCATC 2 cut(s) 588, 1047
SinI GGWCC 2 cut(s) 123, 529
SmiMI CAYNNNNRTG 4 cut(s) 449, 980, 1055, 1100
SpeI ACTAGT 1 cut(s) 653
Sse9I AATT 6 cut(s) 415, 510, 719, 757, 1182, 1292
SsiI CCGC 8 cut(s) 8, 20, 101, 104, 167, 190, 1003, 1143
SspMI CTAG 7 cut(s) 308, 561, 654, 1232, 1404, 1460, 1530
StyD4I CCNGG 1 cut(s) 925
StyI CCWWGG 2 cut(s) 688, 906
TaaI ACNGT 2 cut(s) 94, 873
TaiI ACGT 1 cut(s) 65
TaqI TCGA 1 cut(s) 89
TasI AATT 6 cut(s) 415, 510, 719, 757, 1182, 1292
TatI WGTACW 2 cut(s) 878, 1215
TauI GCSGC 1 cut(s) 104
TfiI GAWTC 4 cut(s) 170, 612, 683, 1068
Tru1I TTAA 3 cut(s) 638, 1295, 1425
Tru9I TTAA 3 cut(s) 638, 1295, 1425
TscAI CASTG 3 cut(s) 543, 559, 1477
TseFI GTSAC 1 cut(s) 94
TseI GCWGC 5 cut(s) 632, 944, 1112, 1353, 1463
Tsp45I GTSAC 1 cut(s) 94
TspDTI ATGAA 3 cut(s) 449, 1142, 1305
TspRI CASTG 3 cut(s) 543, 559, 1477
Tth111I GACNNNGTC 1 cut(s) 247
VneI GTGCAC 1 cut(s) 867
VpaK11BI GGWCC 2 cut(s) 123, 529
XapI RAATTY 1 cut(s) 510
XceI RCATGY 2 cut(s) 846, 1498
XcmI CCANNNNNNNNNTGG 1 cut(s) 1194
XmiI GTMKAC 2 cut(s) 89, 1258
XspI CTAG 7 cut(s) 308, 561, 654, 1232, 1404, 1460, 1530
ZrmI AGTACT 2 cut(s) 880, 1217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.